View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0356_low_7 (Length: 320)
Name: NF0356_low_7
Description: NF0356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0356_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 10980522 - 10980698
Alignment:
| Q |
46 |
aacctgtgcttaatcaaggagttggatactctatcatccttggttttggtgctttctttgctctcttcacctctttcttggttagtaatcatcatcctta |
145 |
Q |
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| T |
10980522 |
aacctgtgcttaatcaaggagttggatactctatcatccttggttttggtgctttctttgctctcttcacctctttcttggttagtaatcatcatcctta |
10980621 |
T |
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| Q |
146 |
aataagtgtatcttccttttttatacaagtagaaaatcacttaggaacatcccaccccatgtttttctcatagttag |
222 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10980622 |
aataagtgtatcttccttttttatacaagtagaaaatcacttaggaacatcccaccccatgtttttctcatagttag |
10980698 |
T |
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