View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0357-Insertion-12 (Length: 241)

Name: NF0357-Insertion-12
Description: NF0357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0357-Insertion-12
NF0357-Insertion-12
[»] chr5 (38 HSPs)
chr5 (61-176)||(39776660-39776772)
chr5 (87-176)||(9502770-9502859)
chr5 (62-176)||(38916368-38916482)
chr5 (87-176)||(978107-978196)
chr5 (87-176)||(30355017-30355106)
chr5 (87-176)||(33387250-33387339)
chr5 (87-176)||(8086173-8086262)
chr5 (90-175)||(11251145-11251230)
chr5 (87-176)||(14634300-14634389)
chr5 (87-176)||(33587612-33587701)
chr5 (87-176)||(3472420-3472509)
chr5 (87-144)||(11761128-11761185)
chr5 (65-133)||(32400400-32400468)
chr5 (87-175)||(40156229-40156317)
chr5 (87-178)||(7224193-7224284)
chr5 (87-137)||(18094224-18094274)
chr5 (87-136)||(9050719-9050768)
chr5 (87-144)||(24992281-24992338)
chr5 (89-144)||(32017275-32017330)
chr5 (87-176)||(11785868-11785958)
chr5 (87-149)||(18998744-18998806)
chr5 (108-162)||(35825006-35825060)
chr5 (87-144)||(26387022-26387079)
chr5 (89-133)||(3422355-3422399)
chr5 (87-163)||(12007775-12007851)
chr5 (93-176)||(34111992-34112075)
chr5 (87-144)||(12447561-12447616)
chr5 (94-147)||(20692541-20692592)
chr5 (87-133)||(24916389-24916435)
chr5 (87-137)||(27109757-27109807)
chr5 (93-133)||(27579579-27579619)
chr5 (90-170)||(40267941-40268020)
chr5 (87-138)||(12456783-12456834)
chr5 (97-160)||(13812093-13812156)
chr5 (90-168)||(5947697-5947775)
chr5 (87-133)||(12359964-12360010)
chr5 (65-121)||(2825242-2825298)
chr5 (104-144)||(37495672-37495712)
[»] chr7 (54 HSPs)
chr7 (87-176)||(42890486-42890575)
chr7 (87-176)||(7438933-7439022)
chr7 (87-176)||(28061658-28061747)
chr7 (87-176)||(36623338-36623427)
chr7 (87-176)||(47156057-47156146)
chr7 (87-176)||(48602466-48602555)
chr7 (81-176)||(41898018-41898113)
chr7 (90-163)||(26161639-26161712)
chr7 (87-176)||(40090061-40090150)
chr7 (87-176)||(36585139-36585228)
chr7 (87-176)||(38851990-38852079)
chr7 (87-176)||(40256087-40256176)
chr7 (87-176)||(44732042-44732131)
chr7 (87-144)||(46103513-46103570)
chr7 (76-176)||(36341650-36341750)
chr7 (87-162)||(2198646-2198721)
chr7 (87-144)||(7457865-7457922)
chr7 (87-176)||(32431501-32431590)
chr7 (87-176)||(35117156-35117244)
chr7 (87-176)||(39130069-39130158)
chr7 (87-175)||(16778536-16778624)
chr7 (87-175)||(27045551-27045639)
chr7 (87-162)||(20885147-20885222)
chr7 (91-176)||(30342104-30342189)
chr7 (90-176)||(6174866-6174952)
chr7 (90-160)||(7169172-7169242)
chr7 (89-175)||(41088618-41088704)
chr7 (87-148)||(6766693-6766754)
chr7 (91-144)||(11502727-11502780)
chr7 (87-144)||(42877448-42877505)
chr7 (87-144)||(46479891-46479948)
chr7 (87-175)||(4131646-4131734)
chr7 (87-175)||(49101956-49102044)
chr7 (103-170)||(3785556-3785623)
chr7 (101-144)||(8683880-8683923)
chr7 (87-176)||(25566691-25566779)
chr7 (87-163)||(5788520-5788596)
chr7 (87-162)||(41134631-41134701)
chr7 (87-162)||(49110613-49110688)
chr7 (90-148)||(5529069-5529127)
chr7 (87-133)||(21379817-21379863)
chr7 (86-144)||(38767201-38767259)
chr7 (87-144)||(3851136-3851193)
chr7 (88-133)||(35570193-35570238)
chr7 (90-158)||(34750550-34750618)
chr7 (108-144)||(42662248-42662284)
chr7 (81-133)||(47525973-47526025)
chr7 (93-140)||(37467456-37467503)
chr7 (75-133)||(4048865-4048923)
chr7 (126-176)||(45331942-45331992)
chr7 (106-176)||(46322127-46322197)
chr7 (65-121)||(7380903-7380959)
chr7 (93-133)||(19120679-19120719)
chr7 (93-133)||(23707572-23707612)
[»] chr4 (61 HSPs)
chr4 (87-176)||(12625281-12625370)
chr4 (66-176)||(36523090-36523200)
chr4 (87-176)||(26170016-26170105)
chr4 (87-176)||(35381037-35381126)
chr4 (87-176)||(38416793-38416882)
chr4 (87-176)||(44232220-44232309)
chr4 (87-176)||(55209717-55209806)
chr4 (87-176)||(12240321-12240410)
chr4 (87-176)||(25296723-25296812)
chr4 (87-176)||(43967753-43967842)
chr4 (87-176)||(54330833-54330922)
chr4 (87-163)||(29830386-29830462)
chr4 (87-176)||(17610310-17610399)
chr4 (87-176)||(38716917-38717005)
chr4 (87-176)||(45291862-45291951)
chr4 (87-176)||(50205773-50205862)
chr4 (87-175)||(7614646-7614734)
chr4 (100-160)||(25101766-25101826)
chr4 (90-176)||(2760873-2760959)
chr4 (96-162)||(3037024-3037090)
chr4 (87-176)||(25918233-25918322)
chr4 (87-176)||(26125738-26125827)
chr4 (87-176)||(31010244-31010333)
chr4 (87-176)||(35686403-35686492)
chr4 (63-160)||(38721383-38721480)
chr4 (87-176)||(47386429-47386518)
chr4 (93-160)||(2571031-2571098)
chr4 (76-176)||(27755749-27755853)
chr4 (87-144)||(4467662-4467719)
chr4 (87-176)||(17446776-17446865)
chr4 (87-176)||(39307726-39307815)
chr4 (99-176)||(55800864-55800941)
chr4 (62-176)||(5428608-5428720)
chr4 (65-176)||(19595735-19595846)
chr4 (87-162)||(27407760-27407837)
chr4 (90-176)||(50620828-50620914)
chr4 (87-144)||(9029592-9029649)
chr4 (87-144)||(14144600-14144657)
chr4 (87-176)||(55191854-55191943)
chr4 (87-163)||(20875390-20875466)
chr4 (87-137)||(19433501-19433551)
chr4 (65-159)||(19903771-19903865)
chr4 (81-146)||(6013154-6013218)
chr4 (95-175)||(29051715-29051793)
chr4 (65-138)||(50181128-50181201)
chr4 (90-175)||(10550455-10550542)
chr4 (88-176)||(56297846-56297934)
chr4 (87-121)||(34652159-34652193)
chr4 (81-174)||(5472088-5472181)
chr4 (90-163)||(34316564-34316636)
chr4 (65-169)||(29585966-29586069)
chr4 (105-141)||(34652208-34652244)
chr4 (87-175)||(37767101-37767189)
chr4 (87-138)||(55091330-55091381)
chr4 (81-163)||(56080025-56080108)
chr4 (87-133)||(27344091-27344137)
chr4 (87-160)||(30446344-30446416)
chr4 (96-133)||(51456506-51456543)
chr4 (127-175)||(8435720-8435768)
chr4 (87-175)||(32871502-32871590)
chr4 (89-176)||(54610892-54610980)
[»] chr3 (39 HSPs)
chr3 (87-176)||(21797586-21797675)
chr3 (62-174)||(44561816-44561928)
chr3 (87-176)||(13499478-13499567)
chr3 (87-176)||(27334874-27334963)
chr3 (87-168)||(30213842-30213923)
chr3 (87-176)||(39866284-39866373)
chr3 (87-176)||(42490339-42490428)
chr3 (87-176)||(27010617-27010706)
chr3 (87-176)||(38137854-38137943)
chr3 (87-176)||(42761626-42761715)
chr3 (87-176)||(20765226-20765315)
chr3 (87-144)||(33415861-33415918)
chr3 (87-176)||(54507671-54507760)
chr3 (87-160)||(52167255-52167328)
chr3 (88-176)||(34912286-34912374)
chr3 (62-137)||(44856415-44856490)
chr3 (87-144)||(21005355-21005412)
chr3 (87-176)||(36227575-36227664)
chr3 (87-175)||(6910365-6910453)
chr3 (87-176)||(33803551-33803641)
chr3 (87-144)||(15332949-15333006)
chr3 (87-163)||(43181498-43181575)
chr3 (90-160)||(25527450-25527520)
chr3 (90-163)||(3430420-3430493)
chr3 (90-163)||(41252909-41252982)
chr3 (87-176)||(43467885-43467974)
chr3 (88-148)||(33128063-33128123)
chr3 (87-175)||(48334664-48334751)
chr3 (87-176)||(19823930-19824013)
chr3 (87-144)||(41751553-41751610)
chr3 (90-158)||(23940508-23940576)
chr3 (87-142)||(17643795-17643850)
chr3 (81-176)||(20410108-20410201)
chr3 (101-148)||(27813445-27813492)
chr3 (95-145)||(3017852-3017902)
chr3 (87-149)||(15568078-15568140)
chr3 (90-136)||(37766122-37766168)
chr3 (90-144)||(55264659-55264713)
chr3 (94-150)||(23224306-23224363)
[»] chr1 (42 HSPs)
chr1 (87-176)||(6402553-6402642)
chr1 (66-176)||(28030803-28030913)
chr1 (87-176)||(11641210-11641299)
chr1 (87-176)||(36757629-36757718)
chr1 (90-176)||(6766402-6766488)
chr1 (87-176)||(40771915-40772004)
chr1 (90-176)||(27292670-27292756)
chr1 (87-176)||(16120583-16120672)
chr1 (87-176)||(17305984-17306073)
chr1 (87-176)||(30003563-30003652)
chr1 (64-163)||(38153397-38153496)
chr1 (62-160)||(44647831-44647929)
chr1 (87-144)||(40977631-40977688)
chr1 (87-176)||(42788685-42788774)
chr1 (87-176)||(26910106-26910195)
chr1 (87-176)||(30701748-30701837)
chr1 (87-176)||(36399128-36399217)
chr1 (87-176)||(24321289-24321380)
chr1 (65-160)||(14777078-14777173)
chr1 (87-173)||(42735308-42735397)
chr1 (94-176)||(48375032-48375114)
chr1 (87-144)||(9342788-9342845)
chr1 (90-163)||(30385291-30385364)
chr1 (87-176)||(52024056-52024145)
chr1 (87-138)||(22575730-22575781)
chr1 (87-176)||(15912479-15912568)
chr1 (87-175)||(3485350-3485438)
chr1 (87-175)||(15382569-15382657)
chr1 (87-143)||(31444986-31445042)
chr1 (81-148)||(9881334-9881401)
chr1 (62-133)||(19711810-19711881)
chr1 (65-168)||(323951-324056)
chr1 (90-176)||(4302148-4302234)
chr1 (87-120)||(25171240-25171273)
chr1 (93-144)||(32898572-32898623)
chr1 (90-161)||(42367442-42367513)
chr1 (94-148)||(34634965-34635019)
chr1 (87-133)||(40800530-40800575)
chr1 (87-136)||(7568629-7568678)
chr1 (99-160)||(44644510-44644571)
chr1 (65-133)||(19895289-19895357)
chr1 (65-133)||(21364823-21364891)
[»] chr2 (39 HSPs)
chr2 (81-176)||(16865084-16865179)
chr2 (87-176)||(5405026-5405115)
chr2 (87-176)||(7608079-7608168)
chr2 (87-176)||(8042165-8042254)
chr2 (87-176)||(11841736-11841825)
chr2 (87-176)||(19141209-19141298)
chr2 (87-176)||(44365187-44365276)
chr2 (87-176)||(7799877-7799966)
chr2 (81-182)||(24093673-24093774)
chr2 (90-176)||(39358176-39358262)
chr2 (87-176)||(6223096-6223185)
chr2 (90-176)||(2183103-2183189)
chr2 (87-175)||(11931722-11931810)
chr2 (90-176)||(36072204-36072290)
chr2 (93-144)||(19262742-19262793)
chr2 (87-148)||(24252018-24252078)
chr2 (90-163)||(42133795-42133868)
chr2 (87-144)||(44644932-44644989)
chr2 (90-160)||(36177723-36177794)
chr2 (88-143)||(38839136-38839191)
chr2 (93-144)||(43444689-43444740)
chr2 (87-144)||(9172289-9172346)
chr2 (87-144)||(32774653-32774710)
chr2 (87-144)||(38292014-38292071)
chr2 (87-163)||(31610796-31610872)
chr2 (65-132)||(3013817-3013884)
chr2 (65-160)||(7666136-7666231)
chr2 (81-144)||(13117461-13117524)
chr2 (87-166)||(13125288-13125367)
chr2 (87-174)||(22839070-22839157)
chr2 (87-176)||(36719467-36719551)
chr2 (87-176)||(33607406-33607491)
chr2 (124-163)||(13598484-13598523)
chr2 (65-160)||(19165904-19165999)
chr2 (91-142)||(31904027-31904078)
chr2 (96-150)||(3837271-3837325)
chr2 (99-144)||(9006939-9006984)
chr2 (64-133)||(9553841-9553909)
chr2 (89-133)||(4835728-4835772)
[»] chr8 (35 HSPs)
chr8 (87-176)||(616813-616902)
chr8 (87-176)||(623206-623295)
chr8 (87-176)||(38957200-38957289)
chr8 (87-176)||(40494414-40494503)
chr8 (87-176)||(42587391-42587480)
chr8 (89-176)||(3100640-3100727)
chr8 (87-176)||(14237310-14237399)
chr8 (87-176)||(18044455-18044544)
chr8 (87-176)||(32998480-32998569)
chr8 (87-176)||(41263840-41263929)
chr8 (87-176)||(36642001-36642091)
chr8 (87-176)||(2766191-2766280)
chr8 (90-175)||(5173282-5173367)
chr8 (87-176)||(13216864-13216953)
chr8 (93-176)||(5878346-5878429)
chr8 (87-176)||(132047-132136)
chr8 (87-176)||(11637812-11637901)
chr8 (87-176)||(35403546-35403635)
chr8 (81-176)||(6414102-6414197)
chr8 (87-176)||(22489416-22489506)
chr8 (88-176)||(4270236-4270324)
chr8 (87-143)||(18035163-18035219)
chr8 (65-133)||(40716644-40716712)
chr8 (66-160)||(8181935-8182030)
chr8 (81-176)||(18090359-18090453)
chr8 (87-153)||(24729908-24729974)
chr8 (87-176)||(8394376-8394465)
chr8 (87-144)||(33700216-33700273)
chr8 (87-136)||(38497142-38497191)
chr8 (87-138)||(9632223-9632274)
chr8 (104-175)||(24524131-24524202)
chr8 (87-177)||(3370399-3370489)
chr8 (65-121)||(32855583-32855639)
chr8 (87-144)||(40204865-40204922)
chr8 (100-176)||(36167106-36167182)
[»] chr6 (40 HSPs)
chr6 (87-176)||(22054802-22054891)
chr6 (87-176)||(24624084-24624173)
chr6 (64-176)||(4440880-4440992)
chr6 (87-177)||(1040853-1040943)
chr6 (87-176)||(6563256-6563345)
chr6 (87-176)||(17213927-17214016)
chr6 (87-176)||(19088101-19088190)
chr6 (87-176)||(20226441-20226530)
chr6 (87-176)||(22120425-22120514)
chr6 (87-176)||(32414822-32414911)
chr6 (87-176)||(4147961-4148050)
chr6 (87-176)||(15383073-15383162)
chr6 (62-163)||(17155192-17155293)
chr6 (87-175)||(29790237-29790325)
chr6 (90-175)||(3623856-3623940)
chr6 (87-176)||(17257794-17257883)
chr6 (87-176)||(18668831-18668920)
chr6 (87-175)||(15337519-15337607)
chr6 (87-175)||(28477784-28477872)
chr6 (93-175)||(19240741-19240823)
chr6 (87-176)||(3989407-3989495)
chr6 (90-175)||(31869739-31869824)
chr6 (87-176)||(32671846-32671935)
chr6 (89-175)||(29693914-29694000)
chr6 (87-148)||(12226033-12226094)
chr6 (87-148)||(24955539-24955600)
chr6 (87-162)||(2360034-2360109)
chr6 (87-149)||(5495306-5495368)
chr6 (87-144)||(23158052-23158109)
chr6 (90-142)||(8101664-8101716)
chr6 (90-144)||(10298719-10298773)
chr6 (87-176)||(20437156-20437246)
chr6 (90-176)||(21540775-21540861)
chr6 (88-144)||(1260492-1260548)
chr6 (93-176)||(31569175-31569258)
chr6 (87-160)||(10520514-10520587)
chr6 (87-176)||(25475956-25476040)
chr6 (79-140)||(28556737-28556798)
chr6 (87-115)||(16193025-16193053)
chr6 (65-133)||(26567265-26567333)
[»] scaffold0056 (1 HSPs)
scaffold0056 (87-176)||(70991-71079)
[»] scaffold0018 (1 HSPs)
scaffold0018 (87-176)||(67912-68001)
[»] scaffold0003 (1 HSPs)
scaffold0003 (87-176)||(161980-162069)
[»] scaffold0295 (1 HSPs)
scaffold0295 (87-163)||(13860-13936)
[»] scaffold0022 (1 HSPs)
scaffold0022 (87-175)||(100790-100878)
[»] scaffold0262 (1 HSPs)
scaffold0262 (87-175)||(22811-22899)
[»] scaffold0225 (1 HSPs)
scaffold0225 (87-175)||(8976-9064)
[»] scaffold0029 (1 HSPs)
scaffold0029 (87-175)||(138173-138261)
[»] scaffold0595 (1 HSPs)
scaffold0595 (93-144)||(4010-4061)
[»] scaffold0099 (1 HSPs)
scaffold0099 (90-144)||(28798-28852)
[»] scaffold0608 (1 HSPs)
scaffold0608 (65-138)||(1588-1661)
[»] scaffold0009 (2 HSPs)
scaffold0009 (65-144)||(53541-53620)
scaffold0009 (87-133)||(217018-217064)


Alignment Details
Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 39776772 - 39776660
Alignment:
Q  61 ctgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    |||||||||||||||||||||||| |||||   | ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | || ||||||    
T  39776772 ctgtaaatatttactgaaataaatcgaaca---ttttacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaata 39776676  T
Q  161 gtgtatattgcaaaaa 176  Q
    ||||| ||||||||||    
T  39776675 gtgtacattgcaaaaa 39776660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 9502770 - 9502859
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| | ||||||||||    
T  9502770 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaa 9502859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 38916368 - 38916482
Alignment:
Q  62 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 161  Q
    ||||||||||||  |||| |||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||  || |||| |||||||    
T  38916368 tgtaaatatttatcgaaacaaatcgaataacatctcacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatag 38916467  T
Q  162 tgtatattgcaaaaa 176  Q
    || ||| ||||||||    
T  38916468 tgcatactgcaaaaa 38916482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 978196 - 978107
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  978196 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 978107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 30355017 - 30355106
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||||  ||||||||| ||||||||||||    
T  30355017 aacaacatcttacatgctaatatttgtatttatatattagttaaaatgtatggttaaagtaaatcaagtgaatagtgcatattgcaaaaa 30355106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 33387339 - 33387250
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| |||  ||||||||| | ||||||||||    
T  33387339 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 33387250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 8086173 - 8086262
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| ||| |||  ||||||||| | ||||||||||    
T  8086173 aacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 8086262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 11251230 - 11251145
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||  ||||||||| | |||||||||    
T  11251230 aacatcgtacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 11251145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 14634300 - 14634389
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| |||  ||| ||||| | ||||||||||    
T  14634300 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgactagtgcacattgcaaaaa 14634389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 33587612 - 33587701
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||| ||| ||||||| || | ||||||||||    
T  33587612 aacaacatcttacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaaatgaataatgcacattgcaaaaa 33587701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 3472420 - 3472509
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| |||||||||| ||| |||  | ||||||| | ||||||||||    
T  3472420 aacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaa 3472509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 11761185 - 11761128
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  11761185 aacaacatcttacatgttaatatttgtatttatatattagttaaaaaatatggtcaaa 11761128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 32400468 - 32400400
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||| ||| | ||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  32400468 aaatatttattgagacaaattaaacaacatcttacatgctaatatttgtatttatatattagttaaaaa 32400400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 40156317 - 40156229
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||| |||||| ||| ||| |||  ||||||||| | |||||||||    
T  40156317 aacaacatcttacatgctaatatttgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaatagtgcacattgcaaaa 40156229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 7224284 - 7224193
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaaat 178  Q
    |||||||| |||||||||||||||||||||||||  ||||||| |||||||||||||| ||| |||  | ||||||  | ||||||||||||    
T  7224284 aacaacattttacatgctaatatttgtatttataaattagttagaaagtatggtcaaagtaagtcaattaaatagtacacattgcaaaaaat 7224193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 18094224 - 18094274
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtat 137  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18094224 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtat 18094274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 9050719 - 9050768
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagta 136  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  9050719 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagta 9050768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 24992281 - 24992338
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||    
T  24992281 aacaacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaa 24992338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 32017330 - 32017275
Alignment:
Q  89 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||| |||||    
T  32017330 caacatcttacatgctaacatttgtatttatatattagttaaaaaatatgatcaaa 32017275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 11785868 - 11785958
Alignment:
Q  87 aacaacatcttacatgctaatattt-gtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||| |||||||| |||||||||  |||||||||||||||| ||||| ||| |||  ||||||||  | ||||||||||    
T  11785868 aacaacatcttacatggtaatattttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtacacattgcaaaaa 11785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 18998806 - 18998744
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaa 149  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||| |||||| ||| ||||    
T  18998806 aacaacatcttacatactaacatttgtatttatatattagttaaaaaatatggttaaagtaaa 18998744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 35825060 - 35825006
Alignment:
Q  108 atttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 162  Q
    |||||||||||||| || |||||||| |||||||||||||||| |||||||||||    
T  35825060 atttgtatttatatattggttaaaaattatggtcaaaataaattatatgaatagt 35825006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 26387022 - 26387079
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||| |||| |||||    
T  26387022 aacaacatcttaaatgctaacatttatatttatatgttagttaaaaaatatgatcaaa 26387079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 3422355 - 3422399
Alignment:
Q  89 caacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||||||||||||||||| |||||||||||||| |||||||||||    
T  3422355 caacatcttacatgctaacatttgtatttatatattagttaaaaa 3422399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 12007775 - 12007851
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    |||||||| ||||||||||  |||||||||||||| ||| |||||||||| ||||||| ||| |||| | |||||||    
T  12007775 aacaacattttacatgctagcatttgtatttatatattaattaaaaagtagggtcaaattaagtcatgtaaatagtg 12007851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 34112075 - 34111992
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||| |||||||||||||||||  ||||| ||||| ||| |||||| ||| |||  ||||||||| | ||||||||||    
T  34112075 atcttacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 34111992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 12447561 - 12447616
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||  |||||||| |  ||||||||||||||||||||||    
T  12447561 aacaacatcttacatgctaata--tgtatttaaacattagttaaaaagtatggtcaaa 12447616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 20692541 - 20692592
Alignment:
Q  94 tcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaata 147  Q
    ||||||||| |||||||||||||||||  || ||||||||||||||||||||||    
T  20692541 tcttacatgttaatatttgtatttata--ttggttaaaaagtatggtcaaaata 20692592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 24916389 - 24916435
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||    
T  24916389 aacaacatcttatatgctaatatttgtatttataaattagttaaaaa 24916435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 27109807 - 27109757
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtat 137  Q
    ||||||||||||||||||||||||||||||| ||  ||| |||||||||||    
T  27109807 aacaacatcttacatgctaatatttgtatttttacattaattaaaaagtat 27109757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 27579579 - 27579619
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  27579579 atcttacatgctaacatttgtatttatatattagttaaaaa 27579619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 40267941 - 40268020
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattg 170  Q
    ||||||||||||||||| |||||||| ||| | ||| ||||||| |||||||||||||||  || | ||||||| ||||||    
T  40267941 aacatcttacatgctaacatttgtatctatgtattaattaaaaa-tatggtcaaaataaactatgtaaatagtgcatattg 40268020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 12456783 - 12456834
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 138  Q
    ||||||||||||||| |||| |||||||||| ||| ||||||||||| ||||    
T  12456783 aacaacatcttacatactaacatttgtatttgtatattagttaaaaaatatg 12456834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 13812156 - 13812093
Alignment:
Q  97 tacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    ||||| |||||||||||||| |||| ||||||||||| |||| | ||||||||| || ||||||    
T  13812156 tacatactaatatttgtattgatatattagttaaaaaatatgattaaaataaattatgtgaata 13812093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 5947697 - 5947775
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatat 168  Q
    ||||| ||| ||||| | ||||||||||||||||||| |||||| ||| |||||| ||| | || |||||| |||||||    
T  5947697 aacattttatatgcttagatttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatat 5947775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 12359964 - 12360010
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||| ||||| |||||||| |||||||||||||| |||||||||||    
T  12359964 aacaatatctttcatgctaacatttgtatttatatattagttaaaaa 12360010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 2825242 - 2825298
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatat 121  Q
    ||||||| | ||| |||||| ||||||||||||| ||||||| |||| |||||||||    
T  2825242 aaatattcattgagataaatcgaacaacatcttatatgctaacatttctatttatat 2825298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 37495712 - 37495672
Alignment:
Q  104 taatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||||||| ||||||||||| |||| |||||    
T  37495712 taatatttgtatttatatattagttaaaaaatatgatcaaa 37495672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 42890486 - 42890575
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| | ||||||||||    
T  42890486 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaatgaatagtgcacattgcaaaaa 42890575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 7439022 - 7438933
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||  |||||| || ||||||||||||    
T  7439022 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaataatgcatattgcaaaaa 7438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 28061658 - 28061747
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  28061658 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 28061747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 36623427 - 36623338
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  36623427 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 36623338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 47156146 - 47156057
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  47156146 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 47156057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 48602555 - 48602466
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| | |||| |||||    
T  48602555 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattggaaaaa 48602466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 41898113 - 41898018
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||  ||||||||| | ||||||||||    
T  41898113 aaatgaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaa 41898018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 26161712 - 26161639
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  26161712 aacattttacatgctaatatttgtatttatatattagttaaaaagcatggtcaaaataaatcatgtgaatagtg 26161639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 40090061 - 40090150
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| |||||    
T  40090061 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaa 40090150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 36585228 - 36585139
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||| ||||||| |||  ||||||||| | ||||||||||    
T  36585228 aacaacatcttacatgctaatatttgtatttatacattagtttaaaagtatggtaaaaataagtcaagtgaatagtgcacattgcaaaaa 36585139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 38851990 - 38852079
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| |||||    
T  38851990 aacaatatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaa 38852079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 40256176 - 40256087
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||| | | ||||||||||    
T  40256176 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagagcacattgcaaaaa 40256087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 44732131 - 44732042
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||| |||  ||||||||| | ||||||||||    
T  44732131 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaa 44732042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 46103513 - 46103570
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46103513 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaa 46103570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 36341750 - 36341650
Alignment:
Q  76 gaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||| |||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||| || ||| ||| |||| ||||||||| | |||||||||    
T  36341750 gaaacaaatcgaacaacatcttacattctaacatttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaa 36341651  T
Q  176 a 176  Q
    |    
T  36341650 a 36341650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 2198721 - 2198646
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 162  Q
    ||||||||||||| || |||||||||||||||||  |||||||||||||||| ||||||||||||| |||||||||    
T  2198721 aacaacatcttacttgttaatatttgtatttatacattagttaaaaagtatgttcaaaataaatcagatgaatagt 2198646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 7457865 - 7457922
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7457865 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaa 7457922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 32431501 - 32431590
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||| |||  |||||| || | ||||||||||    
T  32431501 aacaacatcttacatactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaa 32431590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 35117244 - 35117156
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||| ||| |||  ||||||||| ||||||||||||    
T  35117244 aacaacatcttacatgctaatatttatatttatacattagtt-aaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaa 35117156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 39130069 - 39130158
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||  || |||  ||||||||| | ||||||||||    
T  39130069 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagtcaagtgaatagtgcacattgcaaaaa 39130158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 16778624 - 16778536
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||  ||  ||||||||| | |||||||||    
T  16778624 aacaacatcttacatgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagccaagtgaatagtgcacattgcaaaa 16778536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 27045551 - 27045639
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||| |||| ||| |||||||| || |||| ||||    
T  27045551 aacaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaaccatgtgaatagtatacattgtaaaa 27045639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 20885222 - 20885147
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 162  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||    
T  20885222 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagt 20885147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 30342189 - 30342104
Alignment:
Q  91 acatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||| |||||| |||||||  |||||| || | ||||||||||    
T  30342189 acatcttacatactaatatttgtatttatacattagttaaaaagtatagtcaaagtaaatcaagtgaataatgcacattgcaaaaa 30342104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 6174952 - 6174866
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||| ||||||||||||  ||||||||||| |||||||| | ||| ||| |||||||||| |  |||||||||    
T  6174952 aacatcttacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgcaccttgcaaaaa 6174866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 7169242 - 7169172
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||| ||| |||||| |||||||| ||||||    
T  7169242 aacatcttatatgttaatatttgtatttatatattagttaaaaaatatagtcaaagtaaatcatgtgaata 7169172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 41088704 - 41088618
Alignment:
Q  89 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||| ||||||||| |||||||  ||||||||||| |||||||||| ||| ||| ||||| |||| |||||| ||||    
T  41088704 caacatcttacatgttaatatttgcatttatacattagttaaaaaatatggtcaaagtaagtcagatgaacagtgcatattgtaaaa 41088618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 6766693 - 6766754
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 148  Q
    |||||||||||||||||||| ||||| |||||||  ||||||||||| ||||||||||||||    
T  6766693 aacaacatcttacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaataa 6766754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 11502727 - 11502780
Alignment:
Q  91 acatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  11502727 acatcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaa 11502780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 42877505 - 42877448
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||||    
T  42877505 aacaacatcttacattctaatatttttatttatacattagttaaaaagtatggtcaaa 42877448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 46479948 - 46479891
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||    
T  46479948 aacaacatcttacatgctaatatttgtatttatacattagttaaaaattttggtcaaa 46479891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 4131646 - 4131734
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||| ||| ||| | || |||||||| || |||| ||||    
T  4131646 aacaacatcttacatgctaacttttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattgtaaaa 4131734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 49101956 - 49102044
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||||||||||| || |||||||||||| | ||||||||||| ||||   ||||||| | |||||||||||| |||||| ||||    
T  49101956 aacaacatcttacatgcaaaaatttgtatttatgtattagttaaaaaatatgacaaaaataagttatatgaatagtgcatattgtaaaa 49102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 3785623 - 3785556
Alignment:
Q  103 ctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattg 170  Q
    |||| |||||||||||||| ||||||||||| |||||||||| ||||  |||||||||||| ||||||    
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatatgaatagtgcatattg 3785556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 8683923 - 8683880
Alignment:
Q  101 tgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  8683923 tgctaatatttgtatttatatattagttaaaaagtatggtcaaa 8683880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 25566691 - 25566779
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||| ||||||||||||||||| |||||  ||||||| |||||||||||||| ||| |||  ||||||||| | |||| |||||    
T  25566691 aacaacatctcacatgctaatatttgta-ttatacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaa 25566779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 5788520 - 5788596
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||||||| | ||| ||| |||  |||||||||    
T  5788520 aacaacatcttacatactaatatttgtatttatacattagtaaaaaagtatgattaaagtaagtcaattgaatagtg 5788596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 41134631 - 41134701
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 162  Q
    ||||||||||||||||||||||||||||||||||  |||||||     |||||||||| ||| ||| |||||||||    
T  41134631 aacaacatcttacatgctaatatttgtatttatacattagtta-----tatggtcaaagtaagtcaaatgaatagt 41134701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 49110613 - 49110688
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 162  Q
    ||||| || ||||||  ||| ||||||||| |||| ||||||||||| |||||||||| |||||||| ||||||||    
T  49110613 aacaatattttacatcataacatttgtattaatatattagttaaaaaatatggtcaaagtaaatcatttgaatagt 49110688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 5529127 - 5529069
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 148  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||| ||| ||||||||||    
T  5529127 aacatcttacatgctaacatttttatttgtatattagttaaaaaatatagtcaaaataa 5529069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 21379863 - 21379817
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||    
T  21379863 aacaacatcttacatgctaatatttgtatttatacattagctaaaaa 21379817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 38767201 - 38767259
Alignment:
Q  86 gaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||| || || | |||||||||||||| ||||||||||| ||||||||||    
T  38767201 gaacaacatcttatatactgacatttgtatttatatattagttaaaaaatatggtcaaa 38767259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 3851193 - 3851136
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||| ||||||| || |||||||||||||||||  ||||||||||||||| ||||||    
T  3851193 aacaatatcttacgtgttaatatttgtatttatacattagttaaaaagtattgtcaaa 3851136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 35570193 - 35570238
Alignment:
Q  88 acaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||    
T  35570193 acaacatcttacatgctaaaatttgtatttgtatattagttaaaaa 35570238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 34750618 - 34750550
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaa 158  Q
    ||||||||||||| ||| |||| ||||| ||| |||||||||||||| ||||||| ||| |||| ||||    
T  34750618 aacatcttacatgttaacatttttatttgtatattagttaaaaagtagggtcaaagtaagtcatgtgaa 34750550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 42662284 - 42662248
Alignment:
Q  108 atttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||| ||||||||||||||||||||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaa 42662248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 47525973 - 47526025
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||| |||||| |||||| ||||||| |||||||||||||| |||||||||||    
T  47525973 aaatcgaacaagatcttaaatgctaacatttgtatttatatattagttaaaaa 47526025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 37467456 - 37467503
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggt 140  Q
    |||||| ||||||| |||||||||||||| ||||||||||| ||||||    
T  37467456 atcttaaatgctaacatttgtatttatatattagttaaaaaatatggt 37467503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 4048865 - 4048923
Alignment:
Q  75 tgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||||  ||||||| |||||| ||||  |||||||||||||| |||||||||||    
T  4048865 tgaaataaatcaaacaacaacttacaagctagcatttgtatttatatattagttaaaaa 4048923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 45331992 - 45331942
Alignment:
Q  126 gttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||| |||||||||| ||| ||||||||||| || ||||||||||||    
T  45331992 gttaaaaaatatggtcaaagtaagtcatatgaataatgcatattgcaaaaa 45331942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 46322127 - 46322197
Alignment:
Q  106 atatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||| |||  |||||||||||||||||||||| ||| |||  |||||| || | ||||||||||    
T  46322127 atatttgtattgatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaa 46322197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 7380903 - 7380959
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatat 121  Q
    ||||||||| ||||||||||  |||||||||||||||| ||  |||||| |||||||    
T  7380903 aaatatttattgaaataaatccaacaacatcttacatgttatcatttgtctttatat 7380959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 19120679 - 19120719
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||||||||||||| ||||||||| ||| |||||||    
T  19120679 atcttacatgctaatatttatatttatatattaattaaaaa 19120719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 23707572 - 23707612
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||| |||||||||||||||||||||||  |||||||||||    
T  23707572 atctcacatgctaatatttgtatttatacattagttaaaaa 23707612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 12625370 - 12625281
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| ||||||||||||    
T  12625370 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagatgaatagtgcatattgcaaaaa 12625281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 36523090 - 36523200
Alignment:
Q  66 aatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgta 165  Q
    ||||||||  ||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||| ||| |||| | ||||||| |    
T  36523090 aatatttatcgaaataaatcgaacaacatcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgca 36523189  T
Q  166 tattgcaaaaa 176  Q
    |||||||||||    
T  36523190 tattgcaaaaa 36523200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 26170105 - 26170016
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||  ||||||||| | ||||||||||    
T  26170105 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaa 26170016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 35381037 - 35381126
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| | |||| |||||    
T  35381037 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaa 35381126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 38416793 - 38416882
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  38416793 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 38416882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 44232220 - 44232309
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  44232220 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 44232309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 55209717 - 55209806
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||  ||||||||| | |||| |||||    
T  55209717 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattggaaaaa 55209806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 12240321 - 12240410
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | |||| |||||    
T  12240321 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaa 12240410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 25296723 - 25296812
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  25296723 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 25296812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 43967842 - 43967753
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  | ||||||| | ||||||||||    
T  43967842 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagttaatagtgcacattgcaaaaa 43967753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 54330833 - 54330922
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||| | | ||||||||||    
T  54330833 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagcgcacattgcaaaaa 54330922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 29830462 - 29830386
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  |||||||||    
T  29830462 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtg 29830386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 17610399 - 17610310
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||| |||||||||| ||| |||  ||||||||| ||||||||||||    
T  17610399 aacaacatcttacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaa 17610310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 38717005 - 38716917
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| || ||||||| | ||||||||||    
T  38717005 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtca-attaatagtgcacattgcaaaaa 38716917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 45291951 - 45291862
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||  ||||||||| | |||| |||||    
T  45291951 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattggaaaaa 45291862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 50205862 - 50205773
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||| | ||| ||||||    
T  50205862 aacaacatcttacgagctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaa 50205773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 7614734 - 7614646
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||| ||| || | ||||||| ||||    
T  7614734 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtcatgtgattaatatatattgtaaaa 7614646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 25101826 - 25101766
Alignment:
Q  100 atgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  25101826 atgctaatatttgaatttatatgttagttaaaaagtatggtcaaaataaatcatataaata 25101766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 2760873 - 2760959
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||  ||||||||| | |||| |||||    
T  2760873 aacatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaa 2760959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 3037090 - 3037024
Alignment:
Q  96 ttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 162  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||| ||||||||    
T  3037090 ttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaatagt 3037024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 25918322 - 25918233
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||||| ||||||||||| |||  ||||||||| | ||||||||||    
T  25918322 aacaacatcttacatgctaatatttatatttatacattggttaaaaagtagggtcaaaataattcaagtgaatagtgcacattgcaaaaa 25918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 26125827 - 26125738
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  |||||| || |||||| |||||    
T  26125827 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaataatgcatattgtaaaaa 26125738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 31010333 - 31010244
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | ||| ||||||    
T  31010333 aacaatatcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaa 31010244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 35686492 - 35686403
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| ||| | |  ||||||||| | ||||||||||    
T  35686492 aacaacatcttacatgataatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgcaaaaa 35686403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 38721480 - 38721383
Alignment:
Q  63 gtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    ||||||| |||  |||| |||| ||||||||||||||||||||| |||||||||||||| || |||||||| |||| ||||||||| |||| ||||||    
T  38721480 gtaaatagttatcgaaacaaattgaacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaata 38721383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 47386429 - 47386518
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||| ||||||    
T  47386429 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattccaaaaa 47386518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 2571031 - 2571098
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||    
T  2571031 atcttacatgctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgtgaata 2571098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 27755853 - 27755749
Alignment:
Q  76 gaaataaatggaacaacatcttacatgctaatatttgtatttatat----gttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgc 171  Q
    |||| |||| |||||||||||||| |||||| ||||||||||||||    ||||||||||||||||||||||||||| | ||||||| | |||| ||| |    
T  27755853 gaaacaaattgaacaacatcttacgtgctaacatttgtatttatatatatgttagttaaaaagtatggtcaaaataagttatatgaacaatgtacattac 27755754  T
Q  172 aaaaa 176  Q
    |||||    
T  27755753 aaaaa 27755749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 4467662 - 4467719
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  4467662 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatagtcaaa 4467719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 17446776 - 17446865
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||| | | ||| |||||||||| | |||| |||||    
T  17446776 aacaacatcttacatgttaatatttgtatttatacattagttaaaatgtatggtcaaagttagtcaaatgaatagtgcacattgtaaaaa 17446865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 39307815 - 39307726
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||| |||||| |||| |||||||||||||| ||||||||||||||   ||||| ||| |||| ||||||| ||||||||||||||    
T  39307815 aacaacattttacatactaacatttgtatttatatattagttaaaaagtagcatcaaagtaagtcatgtgaatagggtatattgcaaaaa 39307726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 55800941 - 55800864
Alignment:
Q  99 catgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  55800941 catgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 55800864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 5428720 - 5428608
Alignment:
Q  62 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 161  Q
    |||||| |||||  |||| |||||||||||||||||||||| ||  |||| |||||||  ||||||||||||||||||||||  ||| |||| |||||||    
T  5428720 tgtaaacatttatcgaaacaaatggaacaacatcttacatgatagcatttatatttat--gttagttaaaaagtatggtcaacgtaagtcatgtgaatag 5428623  T
Q  162 tgtatattgcaaaaa 176  Q
    || | ||||| ||||    
T  5428622 tgcacattgccaaaa 5428608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 19595846 - 19595735
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgt 164  Q
    ||||||||  ||||| ||||  ||||| || |||||||||||||||||||||||||  ||||||||| |||||||| ||| ||| |||  |||||||||     
T  19595846 aaatattttttgaaacaaatcaaacaaaatattacatgctaatatttgtatttatacattagttaaagagtatggttaaagtaagtcaagtgaatagtgc 19595747  T
Q  165 atattgcaaaaa 176  Q
    |||||| |||||    
T  19595746 atattgtaaaaa 19595735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 27407760 - 27407837
Alignment:
Q  87 aacaacatcttaca--tgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 162  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||||||| ||||||| ||| | || ||||||||    
T  27407760 aacaacatcttacacatgctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttatgtgaatagt 27407837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 50620828 - 50620914
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||| |||||||||  |||||||||| ||||||||||| ||| | |  ||||||||| ||||||| ||||    
T  50620828 aacatcttacatgctaatattagtatttatacattagttaaaatgtatggtcaaagtaagttaagtgaatagtgcatattgctaaaa 50620914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 9029592 - 9029649
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  9029592 aacaatatcttacgtgctaatatttgtatttatacattagttaaaaagtatggtcaaa 9029649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 14144600 - 14144657
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||    
T  14144600 aacaacatcttacatactaatatttgtatttatatattagttaaaaaatgtggtcaaa 14144657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 55191943 - 55191854
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||| || |||||||||||||||||||| |  ||| ||||||||||| |||||| ||| ||| |||||||||| | ||||||||||    
T  55191943 aacaacattttgcatgctaatatttgtatttacacattaattaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaa 55191854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 20875390 - 20875466
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    |||||||||||| |||| || ||||  |||||||| ||||||||||| |||||||||| ||||| ||||||||||||    
T  20875390 aacaacatcttatatgcaaacatttacatttatatattagttaaaaaatatggtcaaagtaaattatatgaatagtg 20875466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 19433501 - 19433551
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtat 137  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  19433501 aacaacatcttacatgctaatatttgtatttatacaatagttaaaaagtat 19433551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 19903771 - 19903865
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaat 159  Q
    |||||||||  |||| ||||  ||||| |||| ||||||||| |||||||||||||| ||||||||||  |||||||||| ||||| || |||||    
T  19903771 aaatatttatcgaaacaaatcaaacaatatctcacatgctaacatttgtatttatatattagttaaaatatatggtcaaagtaaattatgtgaat 19903865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 6013154 - 6013218
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaat 146  Q
    |||| |||||| |||||||||||| |||||  ||||||||||||||||||||| ||||||||||||    
T  6013154 aaatcgaacaaaatcttacatgctcatatta-tatttatatgttagttaaaaaatatggtcaaaat 6013218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 29051793 - 29051715
Alignment:
Q  95 cttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||  |||||||||||| ||||||||||| |||||||||| ||| | || |||||| ||||||||| ||||    
T  29051793 cttacatgctaat--ttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgtatattgtaaaa 29051715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 50181201 - 50181128
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 138  Q
    ||||||||| ||| | |||| |||||| ||||||||||||||||||||||||||||  ||| ||||||| ||||    
T  50181201 aaatatttattgagacaaatcgaacaatatcttacatgctaatatttgtatttatacattaattaaaaaatatg 50181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 10550542 - 10550455
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagtta--aaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||||||||||| |||| ||||||||| |||||||  |||| |||||| ||| |||| ||| ||||||||| |||||| ||||    
T  10550542 aacatcttacatgctaacatttttatttatatattagttaaaaaaaatatggttaaagtaaaccatgtgaatagtgcatattgtaaaa 10550455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 56297846 - 56297934
Alignment:
Q  88 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||| ||| ||||||| |||||||||||||| |||||||| || ||||||||||| || | || |||||| |||| |||| |||||    
T  56297846 acaacattttatatgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatgtacattgtaaaaa 56297934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 34652159 - 34652193
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatat 121  Q
    |||||||||||||||||||||||||||||||||||    
T  34652159 aacaacatcttacatgctaatatttgtatttatat 34652193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 5472088 - 5472181
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaa 174  Q
    |||| |||||| ||| ||||| |||| |||||||||||||| ||  ||||||||| |||||||| ||||| || |||||| |  ||||||||||    
T  5472088 aaatcgaacaaaatcatacatactaacatttgtatttatatattgattaaaaagtgtggtcaaattaaattatgtgaataatacatattgcaaa 5472181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 34316636 - 34316564
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||||||| ||||||| |||||||||||||| |||||||| || |||| ||||| ||| |||||| |||||||    
T  34316636 aacatcttatatgctaacatttgtatttatatattagttaacaa-tatgatcaaagtaagtcatataaatagtg 34316564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 29585966 - 29586069
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgt 164  Q
    ||||||||| ||| ||||||  || ||||| ||||||| ||| ||||||||||| || ||| ||||||| ||| |||||| ||| | || ||||||||||    
T  29585966 aaatatttattgagataaatcaaaaaacattttacatgttaacatttgtatttacatattaattaaaaaatat-gtcaaagtaagttatgtgaatagtgt 29586064  T
Q  165 atatt 169  Q
    |||||    
T  29586065 atatt 29586069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 34652208 - 34652244
Alignment:
Q  105 aatatttgtatttatatgttagttaaaaagtatggtc 141  Q
    ||||||||||||||||||||||||||||| |||||||    
T  34652208 aatatttgtatttatatgttagttaaaaaatatggtc 34652244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 37767101 - 37767189
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||| ||||||||| |||| |||||||||||||| |  |||||||||||| |||||| ||| |||  | ||||||| ||||| |||||    
T  37767101 aacaatatcttacattctaacatttgtatttatatatacgttaaaaagtatagtcaaagtaagtcacgtaaatagtgcatatttcaaaa 37767189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 55091330 - 55091381
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 138  Q
    ||||||||||||||| |||| |||||||||||||| ||| ||||||| ||||    
T  55091330 aacaacatcttacatactaacatttgtatttatatattaattaaaaaatatg 55091381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 56080108 - 56080025
Alignment:
Q  81 aaatggaacaacatcttacatgctaatattt-gtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    |||||||||||||||||| ||| ||| |||| |||| ||||| ||||||||||| ||| |||||| ||||| ||  ||||||||    
T  56080108 aaatggaacaacatcttatatgataacattttgtatgtatatattagttaaaaaatatagtcaaagtaaattatgcgaatagtg 56080025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 27344091 - 27344137
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||||||||||| ||| |||||||| ||||||||| |||||||||||    
T  27344091 aacaacatcttatatgttaatatttttatttatatattagttaaaaa 27344137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 30446416 - 30446344
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    |||||||| ||||| ||||| |||||||||||||| ||||| ||||| || ||||||| ||| |||| ||||||    
T  30446416 aacaacattttacaggctaacatttgtatttatatattagtcaaaaa-tagggtcaaagtaagtcatgtgaata 30446344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 51456506 - 51456543
Alignment:
Q  96 ttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  51456506 ttacatgctaaaatttgtatttatatattagttaaaaa 51456543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 8435720 - 8435768
Alignment:
Q  127 ttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||| ||||||||||| ||||||||| | || |||||||||    
T  8435720 ttaaaaagtatgatcaaaataaataatatgaataatatacattgcaaaa 8435768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 32871502 - 32871590
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||| ||||| || | ||||||||||| || ||||||||||| |||| |||||| || |||  ||||||| | ||||| |||||    
T  32871502 aacaacatcctacatacttacatttgtatttacatattagttaaaaaatatgatcaaaacaagtcaagtgaatagagcatattacaaaa 32871590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 54610980 - 54610892
Alignment:
Q  89 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaat-agtgtatattgcaaaaa 176  Q
    ||||||||||||| ||||||| ||||||||||  ||| ||||||| |||| | ||| ||| |||  ||||| |||||| ||||||||||    
T  54610980 caacatcttacatactaatatctgtatttatacattaattaaaaaatatgattaaagtaagtcaagtgaataagtgtacattgcaaaaa 54610892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 21797675 - 21797586
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||| | ||||||||||    
T  21797675 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataaatcaagtgaatagtgcacattgcaaaaa 21797586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 174
Target Start/End: Complemental strand, 44561928 - 44561816
Alignment:
Q  62 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 161  Q
    ||||||||||||  |||| |||| |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  44561928 tgtaaatatttatcgaaacaaatcgaacaacatcttacatgtcaacatttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaatag 44561829  T
Q  162 tgtatattgcaaa 174  Q
    || | ||||||||    
T  44561828 tgcacattgcaaa 44561816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 13499478 - 13499567
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  13499478 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 13499567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 27334874 - 27334963
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  27334874 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 27334963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 30213923 - 30213842
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatat 168  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||| ||||    
T  30213923 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcatat 30213842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 39866284 - 39866373
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  39866284 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 39866373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 42490339 - 42490428
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  42490339 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 42490428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 27010617 - 27010706
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||  ||||||||| | ||||||||||    
T  27010617 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 27010706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 38137943 - 38137854
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||   |||||||| | ||||||||||    
T  38137943 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaaataaatcaagcgaatagtgcagattgcaaaaa 38137854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 42761626 - 42761715
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| |||||    
T  42761626 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaa 42761715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 20765315 - 20765226
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| ||| |||  ||||||||| | ||||||||||    
T  20765315 aacaacatcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 20765226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 33415918 - 33415861
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33415918 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaa 33415861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 54507760 - 54507671
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||  ||||||||| |||  ||||||||| ||||||||||||    
T  54507760 aacaacatcttacatgctaatatctgtatttatacattagttaaaaagtataatcaaaataagtcaagtgaatagtgcatattgcaaaaa 54507671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 52167328 - 52167255
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    |||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||| || |||||||||||    
T  52167328 aacaacatcttacatattaatatttgtatttatatattaattaaaaagtatggtcaaaagaagtcatatgaata 52167255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 34912286 - 34912374
Alignment:
Q  88 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  34912286 acaacatcttacaatctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 34912374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 44856490 - 44856415
Alignment:
Q  62 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtat 137  Q
    ||||||||||||  |||| |||  |||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  44856490 tgtaaatatttatcgaaacaaaacgaacaacatcttacatactaacatttgtatttatatgttagttaaaaagtat 44856415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 21005412 - 21005355
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  21005412 aacaacatcttacatgctaatatttatatttatatattaattaaaaagtatggtcaaa 21005355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 36227664 - 36227575
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||| || |||| |||||||||| ||| ||| ||||||||||   ||||||||||    
T  36227664 aacaacatcttacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaaatgaatagtgcgcattgcaaaaa 36227575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 6910453 - 6910365
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||| |||||| ||| ||| |||  ||||||||||| |||| ||||    
T  6910453 aacaacatcttacatgttaatatttgtatttatacattagttaaaaaatatggttaaagtaagtcaagtgaatagtgtacattgtaaaa 6910365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 33803641 - 33803551
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagtta-aaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||| |||||||||| ||||||||  ||||||| ||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  33803641 aacaacatcttacaagctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 33803551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 15332949 - 15333006
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||    
T  15332949 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatttggtcaaa 15333006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 43181498 - 43181575
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||||||||||||| ||||||||| ||||||||  |||||| |||||||||||||||| |||||||  |||||||||    
T  43181498 aacaacatcttacatactaatatttatatttatacattagttaaaaaagtatggtcaaagtaaatcaagtgaatagtg 43181575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 25527520 - 25527450
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    ||||||||||||| |||||||||||||||||| | ||||||||| ||||||| || ||| |||| ||||||    
T  25527520 aacatcttacatgttaatatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaata 25527450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 3430420 - 3430493
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||| |||||||||||||||| |||| |||| ||||||||||| |||||||||| ||| | |||| |||||||    
T  3430420 aacattttacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtg 3430493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 41252909 - 41252982
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| |||||| ||| |||   ||||||||||||    
T  41252909 aacatcttatatgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaatagtg 41252982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 43467885 - 43467974
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||| |||||||||| | |||||||  | |||||||||||||||||||| ||| |||  ||||||||  | ||||||||||    
T  43467885 aacaacatcttacctgctaatattagaatttatacatcagttaaaaagtatggtcaaagtaagtcaagtgaatagtacacattgcaaaaa 43467974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 33128063 - 33128123
Alignment:
Q  88 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 148  Q
    |||| |||||||||| |||||||| ||||||| | |||||||||||||||| |||||||||    
T  33128063 acaatatcttacatgttaatatttatatttatgtattagttaaaaagtatgatcaaaataa 33128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 48334664 - 48334751
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||  ||||| ||| ||||  || |||||| |||| |||| ||||    
T  48334664 aacaacatcttacatgctaatatttgtatttatat-atagttaaaaaaaatggttaaagtaaactatgtgaataatgtacattgtaaaa 48334751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 19824013 - 19823930
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||||||      |||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  19824013 aacaacatcttacatgctaatattt------atacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 19823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 41751553 - 41751610
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||| || ||||||| |||||||||||||| ||||||||||| |||| |||||    
T  41751553 aacaacatcgtaaatgctaacatttgtatttatatattagttaaaaaatatgatcaaa 41751610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 23940508 - 23940576
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaa 158  Q
    ||||||||||||| ||| |||| ||||||||| ||||||||||| || ||||||  ||||| |||||||    
T  23940508 aacatcttacatgttaacatttttatttatatattagttaaaaaataaggtcaatgtaaattatatgaa 23940576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 17643850 - 17643795
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtca 142  Q
    ||||| |||||||||||||| ||||||||||| || ||||||||||| ||| ||||    
T  17643850 aacaatatcttacatgctaacatttgtatttacatattagttaaaaaatatagtca 17643795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 20410201 - 20410108
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||| |||||||||||||||   ||| |||||||| ||||| || |||||||  || ||| ||||||||||||||||||| || ||||||||||||    
T  20410201 aaatcgaacaacatcttacaaattaacatttgtatctatatatt-gttaaaatatacggtaaaaataaatcatatgaata-tgcatattgcaaaaa 20410108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 27813445 - 27813492
Alignment:
Q  101 tgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 148  Q
    |||||| |||||||||||||| ||||||||||| ||| ||||||||||    
T  27813445 tgctaacatttgtatttatatattagttaaaaaatatagtcaaaataa 27813492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 3017902 - 3017852
Alignment:
Q  95 cttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaa 145  Q
    |||| ||||||| ||||||||||||||  |||||||||| |||||||||||    
T  3017902 cttatatgctaacatttgtatttatataatagttaaaaaatatggtcaaaa 3017852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 15568078 - 15568140
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaa 149  Q
    ||||| |||||||| | ||| |||||||||||||| ||||||||||| |||| ||||| ||||    
T  15568078 aacaatatcttacacggtaacatttgtatttatatattagttaaaaaatatgatcaaattaaa 15568140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 37766168 - 37766122
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagta 136  Q
    ||||||||| | ||||||| ||||||| |||||||||||||||||||    
T  37766168 aacatcttagaggctaatacttgtattcatatgttagttaaaaagta 37766122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 55264659 - 55264713
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||| |||||||||||| || |||||| ||||||| ||||| ||||    
T  55264659 aacatcttacatgttaatatttgtatctacatgttaattaaaaaatatggacaaa 55264713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 23224306 - 23224363
Alignment:
Q  94 tcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaat 150  Q
    |||||||| |||||||||| |||||||| |||||| ||||||||| |||||| |||||    
T  23224306 tcttacattctaatatttgcatttatatattagttaaaaaagtatagtcaaagtaaat 23224363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 6402553 - 6402642
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||| | ||||||||||    
T  6402553 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaaa 6402642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 28030803 - 28030913
Alignment:
Q  66 aatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgta 165  Q
    ||||||||  |||| |||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| | |||| || |    
T  28030803 aatatttatcgaaacaaattgaacaatatcttacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgca 28030902  T
Q  166 tattgcaaaaa 176  Q
     ||||||||||    
T  28030903 cattgcaaaaa 28030913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 11641210 - 11641299
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  11641210 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 11641299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 36757629 - 36757718
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  36757629 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 36757718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 6766488 - 6766402
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  6766488 aacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 6766402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 40771915 - 40772004
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||  ||||||||| | |||| |||||    
T  40771915 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgtaaaaa 40772004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 27292756 - 27292670
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||  ||||||||| | ||||||||||    
T  27292756 aacatcttacatgctaatatttgtatttatactttagttaaaaagtatagtcaaagtaaatcaagtgaatagtgcagattgcaaaaa 27292670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 16120583 - 16120672
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  |||||| || | ||||||||||    
T  16120583 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaa 16120672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 17306073 - 17305984
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||| |||  ||||||||| | ||||||||||    
T  17306073 aacaacatcttacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 17305984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 30003652 - 30003563
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||| ||||||    
T  30003652 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaa 30003563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 38153397 - 38153496
Alignment:
Q  64 taaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||||||||  |||| |||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| | | ||| |||| |||||||||    
T  38153397 taaatatttatcgaaacaaatcgaagaacatcttacatgataacatttgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtg 38153496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 44647831 - 44647929
Alignment:
Q  62 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    |||||||| |||  |||| |||| ||||||||||||||||||||| |||||||||||||| || |||||||| |||| ||||||||| |||| ||||||    
T  44647831 tgtaaatagttatcgaaacaaattgaacaacatcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaata 44647929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 40977631 - 40977688
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  40977631 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaa 40977688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 42788685 - 42788774
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||| ||||||    
T  42788685 aacaacatcttacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaa 42788774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 26910195 - 26910106
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||| |||||| |||| |||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  26910195 aacatcatcttgcatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 26910106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 30701837 - 30701748
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||| ||||||    
T  30701837 aacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattacaaaaa 30701748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 36399217 - 36399128
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||| ||| | |  ||||||||| | ||||||||||    
T  36399217 aacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaa 36399128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 24321380 - 24321289
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa--gtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||   |||||||||| |||||||  ||||||||| | ||||||||||    
T  24321380 aacaatatcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaa 24321289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 14777173 - 14777078
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    ||||||| ||||||||||||  |||||||||||||||  ||||||||||||||||||   ||||||||| |||| ||||| ||||  |||||||||    
T  14777173 aaatattaactgaaataaatcaaacaacatcttacatattaatatttgtatttatataacagttaaaaaatatgatcaaagtaaactatatgaata 14777078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 42735308 - 42735397
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagtt---aaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaa 173  Q
    |||| |||||||||||||||||||||||||||||| ||||||   |||||||||||||||| ||| |||  ||||||||| | |||||||    
T  42735308 aacatcatcttacatgctaatatttgtatttatatattagttaaaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaa 42735397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 48375114 - 48375032
Alignment:
Q  94 tcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||||||||  ||||||||||| |||| ||||||||| | |  |||||| |||| ||||||||||    
T  48375114 tcttacatgctaatatttgtatttataaattagttaaaaaatatgatcaaaataagttaagtgaataatgtacattgcaaaaa 48375032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 9342788 - 9342845
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||||    
T  9342788 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaa 9342845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 30385291 - 30385364
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    |||||||||||| |||| |||||||||||||| ||||||||||| |||||||||| ||||  || |||||||||    
T  30385291 aacatcttacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtg 30385364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 52024145 - 52024056
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||| |||||||||| ||||||||  ||||||||||| |||||||||| ||| | |  ||||||||| | ||||||||||    
T  52024145 aacaacatcttacacgctaatatttatatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaa 52024056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 22575730 - 22575781
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 138  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  22575730 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatatg 22575781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 15912479 - 15912568
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||||||||||||| |  | | | |||||||||||||||| ||| |||  ||||||||| | |||| |||||    
T  15912479 aacaacatcttacatgctaatatttgtatttaaaaataaataaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaa 15912568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 3485350 - 3485438
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||| |||||||| ||| |||||||||||||| ||||||||||| |||| ||||| ||| | ||  |||||||| |||||| ||||    
T  3485350 aacaacaccttacatgataacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgcgaatagtgcatattgtaaaa 3485438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 15382569 - 15382657
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||||   |||||| | ||| | || ||||||||||| |||| ||||    
T  15382569 aacaacatcttacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtgaatagtgtacattgtaaaa 15382657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 31445042 - 31444986
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaa 143  Q
    ||||||||||||||||| || |||||| ||||||| ||||||||||| |||||||||    
T  31445042 aacaacatcttacatgcaaacatttgtgtttatatattagttaaaaaatatggtcaa 31444986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 9881401 - 9881334
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 148  Q
    |||| ||||||||||||||||| ||| |||| ||| ||||| ||||||||||| |||||| |||||||    
T  9881401 aaatcgaacaacatcttacatgataacatttatatgtatatattagttaaaaattatggttaaaataa 9881334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 19711810 - 19711881
Alignment:
Q  62 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||||||  |||| ||||  |||| ||||||||||||||  | ||||||||||||||||||||||||    
T  19711810 tgtaaatatttatcgaaacaaatttaacagcatcttacatgctatcacttgtatttatatgttagttaaaaa 19711881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 324056 - 323951
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaa--aaagtatggtcaaaataaatcatatgaatagt 162  Q
    |||||||||  |||| |||| |||| |||  |||||||||||||||||||||||||| | ||||||  |||  ||  ||||||||||| ||||||||| |    
T  324056 aaatatttatcgaaacaaatcgaactacaatttacatgctaatatttgtatttatatataagttaaacaaatcattatcaaaataaattatatgaataat 323957  T
Q  163 gtatat 168  Q
    ||||||    
T  323956 gtatat 323951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 4302234 - 4302148
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||| ||||||||  |||||||||||  ||  ||||| ||| |||  | ||||||||| ||||||||||    
T  4302234 aacatcttacatgctaatatttatatttatacattagttaaaaaacattatcaaagtaagtcaagtaaatagtgtacattgcaaaaa 4302148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 120
Target Start/End: Complemental strand, 25171273 - 25171240
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttata 120  Q
    ||||||||||||||||||||||||||||||||||    
T  25171273 aacaacatcttacatgctaatatttgtatttata 25171240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 32898623 - 32898572
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||| ||||||||| ||||||||||||  ||||||| ||||||||||    
T  32898623 atcttacatactaatatttatatttatatgttgcttaaaaattatggtcaaa 32898572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 42367442 - 42367513
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 161  Q
    ||||||||||||| || ||||||||||||||  ||||||||||| |||| ||||| ||| |||  |||||||    
T  42367442 aacatcttacatgttagtatttgtatttatacattagttaaaaattatgatcaaagtaagtcaagtgaatag 42367513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 34635019 - 34634965
Alignment:
Q  94 tcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 148  Q
    ||||||||| ||| |||||||||||||| ||||||||||| |||  |||||||||    
T  34635019 tcttacatgttaacatttgtatttatatattagttaaaaaatattatcaaaataa 34634965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 40800530 - 40800575
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||    
T  40800530 aacaacatcttacatgctaacatttgta-ttatatattagttaaaaa 40800575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 7568629 - 7568678
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagta 136  Q
    ||||||||||||||  |||| |||| ||||||||| ||||||||||||||    
T  7568629 aacaacatcttacacactaacatttatatttatatattagttaaaaagta 7568678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 44644510 - 44644571
Alignment:
Q  99 catgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    |||||||| |||||||||||||| || |||||||| |||| ||||| ||| |||| ||||||    
T  44644510 catgctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaata 44644571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 19895357 - 19895289
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||||||||  || |||||  ||||||||||||||||  |||||||||| ||||||| ||| |||||||    
T  19895357 aaatatttatcgagataaaacgaacaacatcttacatattaatatttgtgtttatatattaattaaaaa 19895289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 21364891 - 21364823
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||| ||| ||| || ||||||||| ||||||||||| || ||||||| ||| | |||||||||    
T  21364891 aaatatttattgagatagatcgaacaacatattacatgctaacatatgtatttctatataagttaaaaa 21364823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 16865179 - 16865084
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||| |||||    
T  16865179 aaatcgaacaacaacttacatgctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtcatatgaatattgtatattgtaaaaa 16865084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 5405115 - 5405026
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  5405115 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 5405026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 7608168 - 7608079
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  7608168 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 7608079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 8042165 - 8042254
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  8042165 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 8042254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 11841736 - 11841825
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | ||||||||||    
T  11841736 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaa 11841825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 19141209 - 19141298
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  19141209 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 19141298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 44365276 - 44365187
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| ||||||||||||    
T  44365276 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaa 44365187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 7799966 - 7799877
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||| |||| ||||||||| | ||||||||||    
T  7799966 aacaacatcttacatgctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgcaaaaa 7799877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 182
Target Start/End: Original strand, 24093673 - 24093774
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaa-agtatggtcaaaataaatcatatgaatagtgtatattgcaaaaaata 179  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||| | | || ||||||||||    
T  24093673 aaatcgaacaacatcttacatgctaacatttgtatt-atatgttagttaaaaaagtatggtcaaagtaaatcatacgaatagcgcacatcgcaaaaaata 24093771  T
Q  180 cga 182  Q
    |||    
T  24093772 cga 24093774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 39358262 - 39358176
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  39358262 aacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 39358176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 6223185 - 6223096
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||  ||||||||| | ||||||||||    
T  6223185 aacatcatcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 6223096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 2183103 - 2183189
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  2183103 aacatcttacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 2183189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 11931810 - 11931722
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||| ||| | ||||||||| || |||||| ||||    
T  11931810 aacaacatcttaaatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaa 11931722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 36072290 - 36072204
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||| ||||||||  ||||||||||| |||| ||||| ||| ||| |||||||||| |||||| |||||    
T  36072290 aacatcttacatgctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaa 36072204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 19262793 - 19262742
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  19262793 atcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaa 19262742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 24252078 - 24252018
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 148  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  24252078 aacaacat-ttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataa 24252018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 42133868 - 42133795
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    |||||||| |||||||| |||||||||||||| ||||||||||| |||| ||||| ||||  ||||||||||||    
T  42133868 aacatctttcatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtg 42133795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 44644989 - 44644932
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||    
T  44644989 aacaacatcttatatgttaatatttatatttatatattagttaaaaagtatggtcaaa 44644932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 36177723 - 36177794
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaatcatatgaata 160  Q
    ||||||||| ||| |||||||| ||||||||| |||||| ||||| ||||||||||||||||||| ||||||    
T  36177723 aacatcttagatgttaatatttttatttatatattagttaaaaaaatatggtcaaaataaatcatgtgaata 36177794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 38839191 - 38839136
Alignment:
Q  88 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaa 143  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||    
T  38839191 acaacatcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaa 38839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 43444689 - 43444740
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  43444689 atcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaa 43444740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 9172289 - 9172346
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||||||||||  ||||||||||||  ||||||||||| ||||||||||    
T  9172289 aacaacatcttacatgctaacttttgtatttatacattagttaaaaaatatggtcaaa 9172346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 32774710 - 32774653
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||||  |||||||| ||| ||||| ||||||||||||||||||||||    
T  32774710 aacaacatcttacatattaatatttatatgtatatattagttaaaaagtatggtcaaa 32774653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 38292071 - 38292014
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||||| ||| ||||||||||||||  |||||||||| ||||||||||    
T  38292071 aacaacatcttacatgttaacatttgtatttatatactagttaaaaaatatggtcaaa 38292014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 31610796 - 31610872
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    |||||| |||||||| |||| |||||||||||||| |||||||||||  ||||| ||||||| | || |||||||||    
T  31610796 aacaacgtcttacattctaacatttgtatttatatattagttaaaaaaaatggtaaaaataagttatgtgaatagtg 31610872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 3013817 - 3013884
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaa 132  Q
    ||||||||| ||| |||||| |||||||| ||| |||||||  |||||||||||||| ||||||||||    
T  3013817 aaatatttattgagataaatcgaacaacaacttgcatgctagcatttgtatttatatattagttaaaa 3013884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 7666231 - 7666136
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    ||||||||| ||| |||||| ||| || ||||||||| | || | |||||||||||| |||| |||||  |||||||||| ||||| |||||||||    
T  7666231 aaatatttattgatataaattgaataatatcttacataccaacaattgtatttatatattagataaaatatatggtcaaagtaaattatatgaata 7666136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 13117461 - 13117524
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||| ||||||||||||| || ||||||||| ||||||||| | ||||||||| ||||||||||    
T  13117461 aaatcgaacaacatcttagatactaatatttatatttatatatcagttaaaaaatatggtcaaa 13117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 13125288 - 13125367
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtat 166  Q
    ||||| |||||| |||||||||||||||||||||  ||||||||||| |||||| ||| ||| |||  ||||||| ||||    
T  13125288 aacaatatcttagatgctaatatttgtatttatacattagttaaaaaatatggtgaaagtaagtcaagtgaatagagtat 13125367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 22839070 - 22839157
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaa 174  Q
    |||||||||||| ||||||| ||||  ||||||||  |||||||||| |||||||||| ||| | || ||||||||| | ||||||||    
T  22839070 aacaacatcttatatgctaacattttaatttatatactagttaaaaaatatggtcaaagtaagttatgtgaatagtgcacattgcaaa 22839157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 36719467 - 36719551
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||| |||||||||||||||||||     || |||||||||||||||||| ||| |||  |||||||||  | |||||||||    
T  36719467 aacaacatcttaaatgctaatatttgtattta-----tacttaaaaagtatggtcaaagtaagtcaagtgaatagtgcttgttgcaaaaa 36719551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 33607491 - 33607406
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||    |||||||||||||||  |||||||||||||||  ||||| ||| ||| |||||||||| | |||| |||||    
T  33607491 aacaacatcttacat----atatttgtatttatacattagttaaaaagtataatcaaagtaagtcaaatgaatagtgcacattgtaaaaa 33607406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 13598523 - 13598484
Alignment:
Q  124 tagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  13598523 tagttaaaaagtatggtcaaagtaagtcatatgaatagtg 13598484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 19165904 - 19165999
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    |||||||||  |||| ||||  |||||||||||||||| ||| | |||||||||||| ||| |||||||  ||| |||||| || |||| ||||||    
T  19165904 aaatatttatcgaaacaaattaaacaacatcttacatgataacaattgtatttatatattaattaaaaaccatgatcaaaacaagtcatgtgaata 19165999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 31904027 - 31904078
Alignment:
Q  91 acatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtca 142  Q
    ||||||||| || |||||||| ||||||||| ||||||||||| ||||||||    
T  31904027 acatcttacgtgataatatttatatttatatattagttaaaaaatatggtca 31904078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 3837271 - 3837325
Alignment:
Q  96 ttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaat 150  Q
    ||||||||| |||||| ||||||||| ||||||||||| || ||| |||||||||    
T  3837271 ttacatgctgatatttatatttatatattagttaaaaaatacggttaaaataaat 3837325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 9006939 - 9006984
Alignment:
Q  99 catgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||| |||||||||||||  ||||||||||| ||||||||||    
T  9006939 catgctaacatttgtatttataaattagttaaaaaatatggtcaaa 9006984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 9553841 - 9553909
Alignment:
Q  64 taaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||||  || | |||| ||||||||| ||||||| ||||||||| |||||||| |||||||||||    
T  9553841 taaatatttatcgagacaaatcgaacaacattttacatgttaatatttg-atttatatattagttaaaaa 9553909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 4835772 - 4835728
Alignment:
Q  89 caacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||||||||| ||| ||| |||||||||||||| |||||||||||    
T  4835772 caacatcttatatgttaacatttgtatttatatattagttaaaaa 4835728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 616902 - 616813
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  616902 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 623295 - 623206
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  623295 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 623206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 38957289 - 38957200
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||  | ||||||| | ||||||||||    
T  38957289 aacaacatcttacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaaatcaagttaatagtgcacattgcaaaaa 38957200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 40494503 - 40494414
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| |||||    
T  40494503 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaa 40494414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 42587391 - 42587480
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  42587391 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 42587480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 3100640 - 3100727
Alignment:
Q  89 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||  | ||||||| | ||||||||||    
T  3100640 caacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtaaatagtgcacattgcaaaaa 3100727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 14237399 - 14237310
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||||||||||    
T  14237399 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 14237310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 18044544 - 18044455
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||||||||||    
T  18044544 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 18044455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 32998569 - 32998480
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||||||||||    
T  32998569 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 32998480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 41263929 - 41263840
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||||||||||    
T  41263929 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 41263840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 36642001 - 36642091
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagt-atggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| ||| |||  ||||||||| | ||||||||||    
T  36642001 aacaacatcttacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 36642091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 2766191 - 2766280
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| |||  | ||||||| | ||||||||||    
T  2766191 aacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaa 2766280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 5173367 - 5173282
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||||||| |||||||||||||||||| ||||||||| | |||| ||||| |||||||||||||||||  | |||||||||    
T  5173367 aacatcttacatgttaatatttgtatttatatattagttaaataatatgatcaaagtaaatcatatgaatagtacacattgcaaaa 5173282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 13216864 - 13216953
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  13216864 aacaacatctttcatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 13216953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 5878429 - 5878346
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||||||||||    
T  5878429 atcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 5878346  T

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Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 132136 - 132047
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||| ||| |||  ||||||||| |  |||||||||    
T  132136 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaatagtgcacgttgcaaaaa 132047  T

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Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 11637901 - 11637812
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||| |||||||||||   ||||||||||||| ||||||||||| |||  ||||||||| | |||| |||||    
T  11637901 aacaacatcttacatgctaatacttgtatttatacactagttaaaaagtacggtcaaaataagtcaagtgaatagtgcacattgtaaaaa 11637812  T

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Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 35403635 - 35403546
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||| ||  |||  ||||||||| | ||||||||||    
T  35403635 aacaacatcttacatgttaatatctgtatttatacattagttaaaaagtatggtcaaagtatgtcaagtgaatagtgcacattgcaaaaa 35403546  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 6414102 - 6414197
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||| ||||||||| |||||| | ||| |||| |||||||| ||| |||||||||||||||||| ||| |||| ||||||||| | ||||||||||    
T  6414102 aaatcgaacaacattttacataccaatctttgcatttatatattatttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaaaa 6414197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 22489416 - 22489506
Alignment:
Q  87 aacaacatcttacatg-ctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||| |||  ||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  22489416 aacaacatcttgcattactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 22489506  T

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Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 4270236 - 4270324
Alignment:
Q  88 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | ||| ||||||    
T  4270236 acaacatattacatgttaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattacaaaaa 4270324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 18035219 - 18035163
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaa 143  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||    
T  18035219 aacaacatcttacatgctaacatttgcatttatatattagttaaaaattatggtcaa 18035163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 40716644 - 40716712
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||| ||| | ||||  |||||||||||||||||||| |||||||||||||| |||||||||||    
T  40716644 aaatatttattgagacaaatcaaacaacatcttacatgctaaaatttgtatttatatattagttaaaaa 40716712  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 160
Target Start/End: Original strand, 8181935 - 8182030
Alignment:
Q  66 aatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatat-gttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    |||||||| ||||| |||| ||||||||||||||||  ||||||||||||||||||  ||| ||||||| |||| ||| | ||||| |||||||||    
T  8181935 aatatttattgaaacaaattgaacaacatcttacattgtaatatttgtatttatataattaattaaaaaatatgatcatagtaaattatatgaata 8182030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 18090453 - 18090359
Alignment:
Q  81 aaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||| ||||||||||||| ||||||| |||| ||||||||| ||||||||||| |||| || |||||| |||||| ||||||| | |||| |||||    
T  18090453 aaatcgaacaacatcttatatgctaacatttatatttatatattagttaaaaaatatgatc-aaataagtcatataaatagtgcacattgaaaaaa 18090359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 24729974 - 24729908
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcat 153  Q
    ||||||||||||||||||||||||| || | |||| |||||| |||| |||| ||||||||||||||    
T  24729974 aacaacatcttacatgctaatatttatactcatatattagttcaaaattatgatcaaaataaatcat 24729908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 8394465 - 8394376
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||| || |||||||||||| |||||  ||||||||||| | |||||||| ||| |||  ||||||||| | ||||||||||    
T  8394465 aacaacatcttaaatactaatatttgtacttatacattagttaaaaaatttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 8394376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 33700216 - 33700273
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||||||| | |||| |||||||||||||| ||||||||||| ||||||||||    
T  33700216 aacaacatcttacttactaacatttgtatttatatattagttaaaaaatatggtcaaa 33700273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 38497191 - 38497142
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagta 136  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  38497191 aacaacatcttccatgctaatatttgtatttatacattagttaaaaagta 38497142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 9632274 - 9632223
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 138  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||| ||||    
T  9632274 aacaacatcttacatgctaacattagtatttatatgttagtgaaaaaatatg 9632223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 24524202 - 24524131
Alignment:
Q  104 taatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||||||  |||||||||||||||||||||| ||| |||  | ||||||| | |||||||||    
T  24524202 taatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaa 24524131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 3370399 - 3370489
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaaa 177  Q
    ||||| |||||||||  ||| |||||||||||||| ||| ||||||| |||||||||| ||| |||| |||| |||  | |||||||||||    
T  3370399 aacaatatcttacatattaacatttgtatttatatattaattaaaaaatatggtcaaagtaagtcatgtgaacagtccacattgcaaaaaa 3370489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 32855583 - 32855639
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatat 121  Q
    ||||||||| ||| | ||||  |||||||||||||||||||| ||||||||||||||    
T  32855583 aaatatttattgagacaaatcaaacaacatcttacatgctaacatttgtatttatat 32855639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 40204865 - 40204922
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||| ||||| |||||| |||||||||||||| ||||| ||||| |||| |||||    
T  40204865 aacaacaacttacctgctaacatttgtatttatatattagtcaaaaaatatgttcaaa 40204922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 36167182 - 36167106
Alignment:
Q  100 atgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||  ||||| |||||||||  ||||| ||| |||  ||||||||  | ||||||||||    
T  36167182 atgctaatatttgtatttatacattagtgaaaaagtataatcaaagtaagtcaagtgaatagtacacattgcaaaaa 36167106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 22054891 - 22054802
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  ||||||||| ||||||||||||    
T  22054891 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaa 22054802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 24624084 - 24624173
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  24624084 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 24624173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 4440992 - 4440880
Alignment:
Q  64 taaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||||||||  |||| |||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| ||| | ||||||||||||    
T  4440992 taaatatttatcgaaacaaatcgaacaacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatatgaatagtg 4440893  T
Q  164 tatattgcaaaaa 176  Q
     | ||| ||||||    
T  4440892 cacattacaaaaa 4440880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 1040943 - 1040853
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaaa 177  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| |||||||  ||||||||| | |||||||||||    
T  1040943 aacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaaa 1040853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 6563345 - 6563256
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  | ||||||| | ||||||||||    
T  6563345 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaa 6563256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 17213927 - 17214016
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| ||| ||| |||||||||| | ||||||||||    
T  17213927 aacaacatcttacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaa 17214016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 19088101 - 19088190
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||  ||||||||| | ||||||||||    
T  19088101 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 19088190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 20226441 - 20226530
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | ||||||||||    
T  20226441 aacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaa 20226530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 22120425 - 22120514
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | ||||||||||    
T  22120425 aacaacgtcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaa 22120514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 32414822 - 32414911
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||  ||||||||| | |||| |||||    
T  32414822 aacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaa 32414911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 4148050 - 4147961
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||  |||||| || | ||||||||||    
T  4148050 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaa 4147961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 15383073 - 15383162
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||| ||| ||| ||||||| || | ||||||||||    
T  15383073 aacaacatcttacatgctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaatgaataatgcacattgcaaaaa 15383162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 17155293 - 17155192
Alignment:
Q  62 tgtaaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatag 161  Q
    |||||||||||  ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||| ||  |||| |||||||    
T  17155293 tgtaaatattttttgaaacaaattgaacaacatcttacatgctaacatttgtatttatatgttagttatgaagtatgatcaaagtaggtcatgtgaatag 17155194  T
Q  162 tg 163  Q
    ||    
T  17155193 tg 17155192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 29790325 - 29790237
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| || ||| |||| |||||||| || |||||||||    
T  29790325 aacaacaacttacatgctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgcaaaa 29790237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 3623856 - 3623940
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||  ||||||||| ||||||||| ||||    
T  3623856 aacatcttacatgctaacatttgtatttatatattagttaaaaa-tatggtcaaagtaaactatatgaataatgtatattgtaaaa 3623940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 17257794 - 17257883
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||| |||  |||||| || | ||||||||||    
T  17257794 aacaacatcttacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaa 17257883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 18668831 - 18668920
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||  || |||  ||||||||| | ||||||||||    
T  18668831 aacaacatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgcaaaaa 18668920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 15337607 - 15337519
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||| | || |||||| || |||||| ||||    
T  15337607 aacaacattttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaa 15337519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 28477872 - 28477784
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||  || |||| ||||||||  | |||||||||    
T  28477872 aacaacaacttacatgctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaa 28477784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 19240741 - 19240823
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||| ||| ||||||||||||||||| ||||||||||| |||||||||||||| | || |||||||| || |||||||||    
T  19240741 atcttacttgcaaatatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaatagtatacattgcaaaa 19240823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 3989407 - 3989495
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||| ||| |||  ||||||||| | ||||||||||    
T  3989407 aacaacatcttacatgctaatagttgtattta-acattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaa 3989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 31869824 - 31869739
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||||||||||||||| |||||||||||||| |||||||||||  ||||||||| ||||| ||  |||||||||| |||| ||||    
T  31869824 aacatcttacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaa 31869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 32671935 - 32671846
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||| ||| | |  ||||||||| | ||||||||||    
T  32671935 aacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaa 32671846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 29694000 - 29693914
Alignment:
Q  89 caacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||  || |||| ||||||||  | |||||||||    
T  29694000 caacaacttacatgctagtatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaa 29693914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 12226094 - 12226033
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 148  Q
    ||||| ||||||||||||||||||| ||||||||  |||||||||||||||| |||||||||    
T  12226094 aacaatatcttacatgctaatatttatatttatacattagttaaaaagtatgatcaaaataa 12226033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 24955539 - 24955600
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataa 148  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| |||| |||||||||    
T  24955539 aacaacatcttacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaataa 24955600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 2360109 - 2360034
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagt 162  Q
    |||||||| ||||||||||| |||| ||||||||| ||||||||||| ||| |||||| ||||| |||| ||||||    
T  2360109 aacaacattttacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaaattatataaatagt 2360034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 5495368 - 5495306
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaa 149  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||||  ||| ||||||||||    
T  5495368 aacaaaatcttacatgctaacatttgtatttatatattagttaaaaaacatgatcaaaataaa 5495306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 23158052 - 23158109
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||| | ||||||||    
T  23158052 aacaacatcttacatgttaacatttgtatttatatattagttaaaaaatgtggtcaaa 23158109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 8101716 - 8101664
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtca 142  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||    
T  8101716 aacatcttacatgttaacatttgtatttatatattagttaaaaaatatggtca 8101664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 10298719 - 10298773
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||    
T  10298719 aacattttacatgctaacatttgtatttatatattagtgaaaaaatatggtcaaa 10298773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 20437156 - 20437246
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagtt-aaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||| | |||||||||||||||  |||||| ||||| |||| ||||| ||| |||  ||||||||| | ||||||||||    
T  20437156 aacaacatcttacatgttgatatttgtatttatacattagttaaaaaaatatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaa 20437246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 21540775 - 21540861
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||| ||||||  |||||||||||||||||   ||||| ||||||||||||||| ||| ||| |||||||||| | |||| |||||    
T  21540775 aacattttacattataatatttgtatttataaactagtttaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaa 21540861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 1260548 - 1260492
Alignment:
Q  88 acaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||| ||||||| |||||| | |||||||||||| ||||||||||| ||||||||||    
T  1260548 acaaaatcttacgtgctaacaattgtatttatatattagttaaaaaatatggtcaaa 1260492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 31569175 - 31569258
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||| ||||||||||||||||||  ||| | ||||||||| |||||| ||| |||  |||||| || | ||||||||||    
T  31569175 atcttacattctaatatttgtatttatacattaataaaaaagtatagtcaaagtaagtcaagtgaataatgcacattgcaaaaa 31569258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 10520587 - 10520514
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaata 160  Q
    |||||||| ||||||  |||||| ||||||||||  |||||||| | ||||||||||| ||| ||| |||||||    
T  10520587 aacaacattttacatattaatatctgtatttatacattagttaataggtatggtcaaagtaagtcaaatgaata 10520514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 25475956 - 25476040
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||||||||     ||||||||  |||||||||||||| ||||||| ||| |||  |||||| || | ||||||||||    
T  25475956 aacaacatcttacatgctaat-----tatttatacattagttaaaaagtaaggtcaaagtaagtcaagtgaataatgcacattgcaaaaa 25476040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 28556798 - 28556737
Alignment:
Q  79 ataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggt 140  Q
    |||||| || |||||||||||||| |||  ||||||| ||||| ||| ||||||||||||||    
T  28556798 ataaattgagcaacatcttacatgataaattttgtatgtatattttaattaaaaagtatggt 28556737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 115
Target Start/End: Original strand, 16193025 - 16193053
Alignment:
Q  87 aacaacatcttacatgctaatatttgtat 115  Q
    |||||||||||||||||||||||||||||    
T  16193025 aacaacatcttacatgctaatatttgtat 16193053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 26567265 - 26567333
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    ||||||||  ||| |||||| ||||||| | ||||||||||  |||| ||||||||| |||||||||||    
T  26567265 aaatatttgttgagataaattgaacaacgttttacatgctaccatttatatttatatattagttaaaaa 26567333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 71079 - 70991
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||| |||  ||||||||| ||||||||||||    
T  71079 aacaacatcttaaatgctaatatttgtatttatacattagttaaaaa-tatggtcaaaataagtcaagtgaatagtgcatattgcaaaaa 70991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 67912 - 68001
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| ||| ||| |||||||||| | ||| ||||||    
T  67912 aacaacatcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatttcaaaaa 68001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 161980 - 162069
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaaa 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||| |||  ||||||||| | ||| ||||||    
T  161980 aacaacatcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagtcaagtgaatagtgcacattacaaaaa 162069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 13860 - 13936
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtg 163  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| |||  |||||||||    
T  13860 aacaacatcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtg 13936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 100790 - 100878
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||| ||| |||  ||||||||| | |||||||||    
T  100790 aacaacatcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattgcaaaa 100878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 22899 - 22811
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||||||||| |||||||||||||| | ||||||||| | |||||||||||| | || |||||| || |||||| ||||    
T  22899 aacaacatcttacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcatattgtaaaa 22811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 8976 - 9064
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||| ||| | || |||||| || |||||| ||||    
T  8976 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaa 9064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 138173 - 138261
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaaataaatcatatgaatagtgtatattgcaaaa 175  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||| ||| | || |||||| || |||||| ||||    
T  138173 aacaacatcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaa 138261  T

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Target: scaffold0595 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 4061 - 4010
Alignment:
Q  93 atcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  4061 atcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaa 4010  T

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Target: scaffold0099 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 28798 - 28852
Alignment:
Q  90 aacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    ||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||    
T  28798 aacatcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaa 28852  T

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Target: scaffold0608 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Complemental strand, 1661 - 1588
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatg 138  Q
    ||||||||| ||| | |||| |||||| ||||||||||||||||||||||||||||  ||| ||||||| ||||    
T  1661 aaatatttattgagacaaatcgaacaatatcttacatgctaatatttgtatttatacattaattaaaaaatatg 1588  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 53541 - 53620
Alignment:
Q  65 aaatatttactgaaataaatggaacaacatcttacatgctaatatttgtatttatatgttagttaaaaagtatggtcaaa 144  Q
    |||||||||  |||| ||||  ||||||||||| |||||||| ||||||| |||||| ||||||||||| |||| |||||    
T  53541 aaatatttatcgaaacaaatcaaacaacatcttgcatgctaaaatttgtaattatatattagttaaaaaatatgatcaaa 53620  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 217018 - 217064
Alignment:
Q  87 aacaacatcttacatgctaatatttgtatttatatgttagttaaaaa 133  Q
    |||||||||||| ||||||| |||||||||||||| ||| |||||||    
T  217018 aacaacatcttatatgctaacatttgtatttatatattacttaaaaa 217064  T

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