View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0357-Insertion-9 (Length: 304)
Name: NF0357-Insertion-9
Description: NF0357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0357-Insertion-9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 8 - 304
Target Start/End: Original strand, 42944534 - 42944826
Alignment:
| Q |
8 |
tcaagactaagatttagagagatgagatgtggctgtaaatcaatgaattaagcgagcatcttgtgatgtaaatcaactgatatagatttggttagttagt |
107 |
Q |
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| T |
42944534 |
tcaagactaagatttagagagatgagatgtggctataaatcaatgaattaagcgagcatcttgtgatgtaaatcaactgatatagatttggtta----gt |
42944629 |
T |
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| Q |
108 |
tagttacatctgagcagttaattctattatttctattactaaggagttatcatgtgatcacttgtataagtacaatttacattgataatgaacaacaaat |
207 |
Q |
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| T |
42944630 |
tagttacatctgagcagttaattctattatttctattactaaggagttatcatgtgatcacttgtataagtacaatttacattgataatgaacaacaaat |
42944729 |
T |
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| Q |
208 |
ttcattgagagaaatttttcatctcaaagtaactctcttctatactttctgattcatattgtgtatgtaattgagtgtggtttcttaatttcaaacc |
304 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42944730 |
ttcattgagagaaatttttcatctcaaaataactctcttctatactttctgtttcatattgtgtatgtaattgagtgtggtttcttaatttcaaacc |
42944826 |
T |
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