View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0357_low_7 (Length: 296)
Name: NF0357_low_7
Description: NF0357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0357_low_7 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 36885088 - 36885202
Alignment:
| Q |
86 |
aggtggggaggacaaaactaaaaagtattgttttgnnnnnnnaaaagtattgtgcgtagtgtctaaatagaaaacttttgtcgttgaagaacataatccc |
185 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36885088 |
aggtggggaggacaaaactaaaaagtattgttttgtttttttaaaagtattgtgcgtagtgtctaaatagaaaacttttgtcgttgaagaacgtaatccc |
36885187 |
T |
|
| Q |
186 |
tgtcaatgaaaatag |
200 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
36885188 |
tgtcaatgaaaatag |
36885202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University