View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0359-Insertion-1 (Length: 690)

Name: NF0359-Insertion-1
Description: NF0359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0359-Insertion-1
NF0359-Insertion-1
[»] chr8 (42 HSPs)
chr8 (8-687)||(2689678-2690357)
chr8 (48-322)||(31224485-31224761)
chr8 (308-486)||(14881275-14881453)
chr8 (308-486)||(14893625-14893803)
chr8 (298-635)||(20851763-20852100)
chr8 (312-486)||(31991241-31991415)
chr8 (302-506)||(33773698-33773902)
chr8 (308-486)||(31998830-31999008)
chr8 (338-687)||(14437735-14438088)
chr8 (324-486)||(17269125-17269284)
chr8 (302-486)||(20530909-20531093)
chr8 (302-436)||(11430307-11430441)
chr8 (324-486)||(21202426-21202588)
chr8 (324-486)||(21212842-21213004)
chr8 (302-387)||(5759687-5759772)
chr8 (324-436)||(21987580-21987692)
chr8 (213-326)||(5759566-5759680)
chr8 (324-486)||(9324626-9324788)
chr8 (324-434)||(21997116-21997226)
chr8 (460-687)||(26361736-26361966)
chr8 (213-436)||(23014683-23014899)
chr8 (423-484)||(23474146-23474207)
chr8 (324-436)||(21334605-21334717)
chr8 (625-687)||(31998637-31998698)
chr8 (225-326)||(11430448-11430549)
chr8 (498-687)||(21987144-21987337)
chr8 (498-687)||(21996678-21996871)
chr8 (324-486)||(13674893-13675055)
chr8 (213-326)||(20531100-20531214)
chr8 (625-687)||(31991048-31991109)
chr8 (625-687)||(33773522-33773583)
chr8 (638-687)||(17269439-17269488)
chr8 (602-687)||(11429953-11430034)
chr8 (625-687)||(14881081-14881143)
chr8 (625-687)||(14893431-14893493)
chr8 (653-687)||(20530355-20530389)
chr8 (288-326)||(20851721-20851759)
chr8 (656-687)||(11429865-11429896)
chr8 (59-123)||(20531312-20531378)
chr8 (498-532)||(20530686-20530720)
chr8 (625-687)||(23014427-23014488)
chr8 (288-326)||(31991431-31991469)
[»] chr7 (71 HSPs)
chr7 (303-687)||(14247899-14248289)
chr7 (300-687)||(2991284-2991671)
chr7 (228-506)||(19585957-19586236)
chr7 (296-687)||(12770359-12770748)
chr7 (308-486)||(45553496-45553674)
chr7 (308-486)||(24540410-24540588)
chr7 (303-687)||(9007225-9007610)
chr7 (71-326)||(9006951-9007216)
chr7 (552-687)||(15988061-15988201)
chr7 (338-687)||(5614851-5615204)
chr7 (302-479)||(10415988-10416165)
chr7 (302-483)||(12491618-12491799)
chr7 (160-263)||(12770253-12770356)
chr7 (338-687)||(13285104-13285452)
chr7 (338-687)||(31825032-31825384)
chr7 (319-506)||(12515440-12515627)
chr7 (370-687)||(42595728-42596047)
chr7 (341-484)||(15988254-15988396)
chr7 (324-486)||(11625957-11626119)
chr7 (324-486)||(26362794-26362956)
chr7 (324-486)||(27989148-27989310)
chr7 (324-486)||(5381408-5381570)
chr7 (324-486)||(5391046-5391208)
chr7 (324-486)||(5927442-5927604)
chr7 (324-486)||(32098687-32098849)
chr7 (324-486)||(32109124-32109286)
chr7 (324-486)||(46497421-46497583)
chr7 (324-486)||(46508033-46508195)
chr7 (324-436)||(6534791-6534903)
chr7 (324-436)||(6545112-6545224)
chr7 (370-687)||(41027944-41028264)
chr7 (324-436)||(44908027-44908139)
chr7 (359-486)||(26307457-26307584)
chr7 (324-486)||(8501356-8501518)
chr7 (324-486)||(8511826-8511988)
chr7 (625-687)||(9534634-9534695)
chr7 (324-486)||(9534833-9534995)
chr7 (324-486)||(9545116-9545278)
chr7 (324-486)||(16131507-16131669)
chr7 (324-486)||(16142056-16142218)
chr7 (625-687)||(19586351-19586412)
chr7 (324-486)||(43983784-43983946)
chr7 (324-434)||(44897602-44897712)
chr7 (225-326)||(12491510-12491611)
chr7 (338-532)||(7018962-7019156)
chr7 (338-532)||(7034324-7034518)
chr7 (625-687)||(9544917-9544978)
chr7 (213-326)||(10415867-10415981)
chr7 (338-436)||(15372169-15372267)
chr7 (625-687)||(27989609-27989670)
chr7 (625-687)||(42621696-42621757)
chr7 (338-436)||(14944576-14944674)
chr7 (604-687)||(24540038-24540117)
chr7 (602-687)||(12515731-12515812)
chr7 (602-687)||(45553965-45554046)
chr7 (225-322)||(12515318-12515412)
chr7 (338-509)||(12826917-12827088)
chr7 (653-687)||(24539862-24539896)
chr7 (653-687)||(43984291-43984325)
chr7 (288-326)||(45553445-45553483)
chr7 (653-687)||(45554188-45554222)
chr7 (638-687)||(7018801-7018850)
chr7 (638-687)||(7034163-7034212)
chr7 (639-687)||(14946728-14946776)
chr7 (639-687)||(15374321-15374369)
chr7 (656-687)||(10416530-10416561)
chr7 (656-687)||(45554103-45554134)
chr7 (625-687)||(8340812-8340873)
chr7 (592-654)||(12826781-12826843)
chr7 (288-326)||(24540601-24540639)
chr7 (653-687)||(27989724-27989758)
[»] chr2 (80 HSPs)
chr2 (14-525)||(21109254-21109765)
chr2 (71-687)||(69487-70113)
chr2 (288-479)||(37862644-37862835)
chr2 (308-486)||(45191131-45191309)
chr2 (302-532)||(12570873-12571102)
chr2 (359-687)||(19342649-19342980)
chr2 (359-687)||(22902474-22902804)
chr2 (302-436)||(574553-574687)
chr2 (302-486)||(3605512-3605696)
chr2 (600-687)||(21109792-21109879)
chr2 (324-486)||(44638531-44638693)
chr2 (460-687)||(22908190-22908419)
chr2 (308-486)||(22687259-22687438)
chr2 (552-687)||(27159319-27159456)
chr2 (552-687)||(27169667-27169804)
chr2 (406-684)||(15474877-15475154)
chr2 (324-486)||(16902087-16902249)
chr2 (324-486)||(16995478-16995640)
chr2 (324-486)||(17488997-17489159)
chr2 (338-486)||(38957360-38957508)
chr2 (324-486)||(2998207-2998369)
chr2 (324-486)||(4458502-4458664)
chr2 (324-486)||(4468127-4468289)
chr2 (324-486)||(5336645-5336807)
chr2 (324-486)||(5346498-5346660)
chr2 (324-486)||(9502270-9502432)
chr2 (324-486)||(9513636-9513798)
chr2 (324-486)||(18651525-18651687)
chr2 (324-486)||(18663643-18663805)
chr2 (324-486)||(24696095-24696257)
chr2 (213-326)||(3605703-3605816)
chr2 (248-355)||(24238739-24238845)
chr2 (343-486)||(38930013-38930156)
chr2 (625-687)||(24695896-24695957)
chr2 (625-687)||(37862428-37862489)
chr2 (324-486)||(45015017-45015179)
chr2 (625-687)||(45015317-45015378)
chr2 (324-486)||(45025116-45025278)
chr2 (625-687)||(45191441-45191502)
chr2 (618-687)||(41026220-41026288)
chr2 (385-670)||(23730153-23730440)
chr2 (498-687)||(32936100-32936293)
chr2 (213-326)||(22687451-22687564)
chr2 (625-687)||(29423957-29424018)
chr2 (498-687)||(3605136-3605325)
chr2 (625-687)||(12571201-12571262)
chr2 (338-436)||(23722222-23722320)
chr2 (633-687)||(38929822-38929875)
chr2 (602-687)||(16901711-16901792)
chr2 (602-687)||(16995102-16995183)
chr2 (653-687)||(4459009-4459043)
chr2 (653-687)||(4468634-4468668)
chr2 (653-687)||(5336176-5336210)
chr2 (653-687)||(5336267-5336301)
chr2 (653-687)||(5346028-5346062)
chr2 (653-687)||(5346119-5346153)
chr2 (653-687)||(16901535-16901569)
chr2 (498-532)||(16901866-16901900)
chr2 (653-687)||(16994926-16994960)
chr2 (498-532)||(16995257-16995291)
chr2 (338-436)||(27159572-27159670)
chr2 (338-436)||(27169920-27170018)
chr2 (447-532)||(28450743-28450829)
chr2 (653-687)||(33432520-33432554)
chr2 (653-687)||(33432611-33432645)
chr2 (637-687)||(38957164-38957213)
chr2 (498-532)||(44638299-44638333)
chr2 (218-326)||(12570757-12570866)
chr2 (227-326)||(45191018-45191118)
chr2 (656-687)||(3605048-3605079)
chr2 (656-687)||(16901623-16901654)
chr2 (656-687)||(16995014-16995045)
chr2 (656-687)||(22679152-22679183)
chr2 (620-687)||(28450926-28450992)
chr2 (288-326)||(574508-574546)
chr2 (653-687)||(3604960-3604994)
chr2 (653-687)||(22679064-22679098)
chr2 (338-436)||(22908444-22908542)
chr2 (402-464)||(24234196-24234258)
chr2 (338-392)||(29423663-29423717)
[»] chr4 (90 HSPs)
chr4 (308-651)||(11477191-11477532)
chr4 (312-687)||(13792431-13792806)
chr4 (300-687)||(6405224-6405616)
chr4 (298-687)||(14600055-14600449)
chr4 (308-486)||(16629827-16630005)
chr4 (285-508)||(16397162-16397385)
chr4 (308-610)||(41526407-41526710)
chr4 (300-512)||(19918482-19918695)
chr4 (302-532)||(16210712-16210942)
chr4 (338-687)||(17420699-17421050)
chr4 (324-503)||(9835642-9835821)
chr4 (338-687)||(521593-521946)
chr4 (359-498)||(15622349-15622489)
chr4 (302-479)||(2829811-2829988)
chr4 (344-687)||(8841515-8841848)
chr4 (359-687)||(26458753-26459084)
chr4 (309-479)||(53945907-53946077)
chr4 (302-434)||(7846389-7846522)
chr4 (552-687)||(15622214-15622354)
chr4 (513-631)||(41526708-41526825)
chr4 (213-326)||(44888908-44889021)
chr4 (324-486)||(5292688-5292850)
chr4 (324-486)||(5302347-5302509)
chr4 (324-486)||(6692525-6692687)
chr4 (324-486)||(6702931-6703093)
chr4 (324-486)||(17827765-17827927)
chr4 (324-486)||(17837156-17837318)
chr4 (324-486)||(17984464-17984626)
chr4 (324-486)||(18105014-18105176)
chr4 (324-486)||(27680351-27680513)
chr4 (324-486)||(27690006-27690168)
chr4 (324-486)||(40922150-40922312)
chr4 (302-392)||(44889028-44889118)
chr4 (324-436)||(16249753-16249865)
chr4 (324-436)||(21856002-21856114)
chr4 (324-436)||(21911865-21911977)
chr4 (324-486)||(3487227-3487389)
chr4 (324-486)||(3496550-3496712)
chr4 (248-326)||(14600453-14600530)
chr4 (625-687)||(16630137-16630198)
chr4 (225-326)||(16210949-16211050)
chr4 (338-687)||(30651902-30652249)
chr4 (338-486)||(15670410-15670558)
chr4 (464-536)||(17161994-17162066)
chr4 (324-436)||(21846410-21846522)
chr4 (324-436)||(21902273-21902385)
chr4 (625-687)||(10422387-10422448)
chr4 (625-687)||(15670684-15670745)
chr4 (602-687)||(2830218-2830299)
chr4 (350-486)||(10422105-10422241)
chr4 (602-687)||(16210457-16210538)
chr4 (324-436)||(16253666-16253778)
chr4 (464-536)||(17144085-17144156)
chr4 (625-687)||(7846136-7846198)
chr4 (628-687)||(44889538-44889596)
chr4 (343-532)||(13402611-13402800)
chr4 (358-484)||(16058612-16058737)
chr4 (580-687)||(16397647-16397750)
chr4 (626-683)||(16253841-16253897)
chr4 (324-436)||(52499408-52499520)
chr4 (652-687)||(17162131-17162166)
chr4 (653-687)||(2830441-2830475)
chr4 (653-687)||(2830617-2830651)
chr4 (653-687)||(3486846-3486880)
chr4 (653-687)||(3496169-3496203)
chr4 (653-687)||(4837485-4837519)
chr4 (653-687)||(5292307-5292341)
chr4 (653-687)||(5301966-5302000)
chr4 (653-687)||(21846917-21846951)
chr4 (653-687)||(21856509-21856543)
chr4 (653-687)||(21902780-21902814)
chr4 (653-687)||(21912372-21912406)
chr4 (653-687)||(27679972-27680006)
chr4 (653-687)||(27689627-27689661)
chr4 (602-688)||(13402271-13402353)
chr4 (227-326)||(16629714-16629814)
chr4 (656-687)||(2830356-2830387)
chr4 (656-687)||(2830532-2830563)
chr4 (656-687)||(4837397-4837428)
chr4 (279-326)||(7846529-7846576)
chr4 (656-687)||(16058916-16058947)
chr4 (652-687)||(17144271-17144306)
chr4 (652-687)||(30652302-30652337)
chr4 (656-687)||(53945508-53945539)
chr4 (498-532)||(13402426-13402460)
chr4 (653-687)||(17144360-17144394)
chr4 (365-486)||(17161549-17161668)
chr4 (653-687)||(44889650-44889684)
chr4 (658-687)||(16210369-16210398)
chr4 (549-589)||(16058805-16058845)
[»] chr6 (69 HSPs)
chr6 (365-687)||(27786902-27787224)
chr6 (302-532)||(18711816-18712046)
chr6 (302-532)||(18705881-18706111)
chr6 (302-532)||(26168690-26168920)
chr6 (302-486)||(16321596-16321780)
chr6 (302-486)||(16333744-16333928)
chr6 (423-687)||(19361297-19361563)
chr6 (498-687)||(15503918-15504100)
chr6 (338-687)||(34765669-34766022)
chr6 (552-687)||(18333243-18333380)
chr6 (308-397)||(24505078-24505167)
chr6 (322-486)||(1597111-1597275)
chr6 (302-486)||(30657745-30657926)
chr6 (302-486)||(790809-790992)
chr6 (324-486)||(14791909-14792071)
chr6 (324-486)||(18170180-18170342)
chr6 (324-486)||(24930629-24930791)
chr6 (623-687)||(8562699-8562763)
chr6 (338-486)||(24921593-24921741)
chr6 (343-486)||(18160387-18160530)
chr6 (324-486)||(3286153-3286315)
chr6 (338-512)||(8562838-8563012)
chr6 (324-486)||(12455360-12455522)
chr6 (324-486)||(16898253-16898415)
chr6 (324-486)||(16908906-16909068)
chr6 (324-486)||(20912589-20912751)
chr6 (464-687)||(30657364-30657588)
chr6 (324-436)||(31357867-31357979)
chr6 (324-436)||(31367596-31367708)
chr6 (225-326)||(790999-791100)
chr6 (580-687)||(24692369-24692475)
chr6 (338-486)||(18201512-18201660)
chr6 (338-486)||(29540761-29540909)
chr6 (602-687)||(18201954-18202036)
chr6 (343-486)||(26020356-26020499)
chr6 (625-687)||(17826456-17826517)
chr6 (633-687)||(20968454-20968507)
chr6 (596-687)||(26019982-26020069)
chr6 (602-687)||(1597566-1597647)
chr6 (218-322)||(26168552-26168656)
chr6 (274-326)||(30657933-30657985)
chr6 (213-326)||(16321475-16321589)
chr6 (213-326)||(16333623-16333737)
chr6 (213-326)||(18706118-18706232)
chr6 (213-326)||(18712053-18712167)
chr6 (287-326)||(26168644-26168683)
chr6 (640-687)||(26169034-26169080)
chr6 (653-687)||(1597789-1597823)
chr6 (653-687)||(7754120-7754154)
chr6 (328-386)||(17826164-17826222)
chr6 (288-326)||(24505180-24505218)
chr6 (653-687)||(26019806-26019840)
chr6 (625-687)||(29541050-29541111)
chr6 (653-687)||(30657276-30657310)
chr6 (549-589)||(22223066-22223106)
chr6 (549-589)||(22248901-22248941)
chr6 (656-687)||(790420-790451)
chr6 (656-687)||(1597704-1597735)
chr6 (656-687)||(18202093-18202124)
chr6 (656-687)||(22222879-22222910)
chr6 (656-687)||(22248714-22248745)
chr6 (498-532)||(18201846-18201880)
chr6 (653-687)||(18202178-18202212)
chr6 (59-116)||(30658125-30658182)
chr6 (658-687)||(790508-790537)
chr6 (639-687)||(18705721-18705768)
chr6 (639-687)||(18711656-18711703)
chr6 (656-688)||(22222966-22222998)
chr6 (656-688)||(22248801-22248833)
[»] scaffold0142 (2 HSPs)
scaffold0142 (310-684)||(28181-28557)
scaffold0142 (25-299)||(28545-28818)
[»] chr1 (81 HSPs)
chr1 (14-326)||(22956555-22956868)
chr1 (324-585)||(18058571-18058833)
chr1 (302-506)||(26193017-26193221)
chr1 (302-486)||(20317631-20317815)
chr1 (303-532)||(18096476-18096706)
chr1 (308-486)||(20314725-20314903)
chr1 (200-483)||(21821059-21821342)
chr1 (329-486)||(27066395-27066552)
chr1 (308-486)||(20328113-20328291)
chr1 (338-687)||(1974082-1974433)
chr1 (302-486)||(22961177-22961361)
chr1 (302-486)||(25039002-25039186)
chr1 (302-486)||(25044214-25044398)
chr1 (370-686)||(2369819-2370135)
chr1 (71-512)||(34822997-34823450)
chr1 (302-436)||(4950813-4950947)
chr1 (302-506)||(25823021-25823225)
chr1 (465-687)||(52949095-52949319)
chr1 (338-687)||(1988869-1989220)
chr1 (201-326)||(21792899-21793024)
chr1 (324-532)||(18383664-18383871)
chr1 (359-486)||(2117195-2117322)
chr1 (302-485)||(37012279-37012461)
chr1 (308-397)||(20309163-20309252)
chr1 (302-391)||(49333633-49333722)
chr1 (338-493)||(13965182-13965337)
chr1 (324-486)||(16155190-16155352)
chr1 (324-486)||(21458935-21459097)
chr1 (324-486)||(25019775-25019937)
chr1 (618-687)||(8540857-8540926)
chr1 (618-687)||(8606096-8606165)
chr1 (213-326)||(37012159-37012272)
chr1 (498-687)||(37012655-37012841)
chr1 (343-486)||(42034498-42034641)
chr1 (625-687)||(2117459-2117520)
chr1 (625-687)||(20315035-20315096)
chr1 (300-394)||(22956874-22956968)
chr1 (625-687)||(27066684-27066745)
chr1 (213-326)||(4950693-4950806)
chr1 (225-326)||(18096714-18096815)
chr1 (213-326)||(26193228-26193332)
chr1 (225-326)||(49333525-49333626)
chr1 (312-436)||(21793042-21793166)
chr1 (607-687)||(34823554-34823633)
chr1 (625-687)||(42034818-42034879)
chr1 (553-637)||(18058431-18058514)
chr1 (602-687)||(26192661-26192742)
chr1 (359-506)||(19748152-19748298)
chr1 (633-687)||(30549021-30549074)
chr1 (217-326)||(22961061-22961170)
chr1 (225-326)||(25823232-25823333)
chr1 (602-687)||(41543401-41543483)
chr1 (602-687)||(19747877-19747958)
chr1 (620-687)||(13965467-13965534)
chr1 (620-687)||(18096316-18096382)
chr1 (228-326)||(20317822-20317921)
chr1 (61-116)||(21821435-21821490)
chr1 (653-687)||(20327569-20327603)
chr1 (597-687)||(21820859-21820946)
chr1 (625-687)||(22961508-22961569)
chr1 (625-687)||(25038792-25038853)
chr1 (225-326)||(25039193-25039295)
chr1 (625-687)||(25044004-25044065)
chr1 (653-687)||(41543225-41543259)
chr1 (498-532)||(41543556-41543590)
chr1 (343-532)||(41543678-41543866)
chr1 (343-436)||(30549269-30549362)
chr1 (227-326)||(27066270-27066370)
chr1 (656-687)||(4951064-4951095)
chr1 (656-687)||(20317175-20317206)
chr1 (656-687)||(20327657-20327688)
chr1 (656-687)||(25822560-25822591)
chr1 (656-687)||(26192573-26192604)
chr1 (656-687)||(41543313-41543344)
chr1 (288-326)||(20314674-20314712)
chr1 (653-687)||(20317087-20317121)
chr1 (288-326)||(20328304-20328342)
chr1 (233-326)||(25044405-25044499)
chr1 (343-399)||(8540576-8540632)
chr1 (343-399)||(8605815-8605871)
chr1 (602-687)||(49336245-49336326)
[»] chr3 (63 HSPs)
chr3 (288-688)||(10508067-10508473)
chr3 (308-486)||(19827823-19828001)
chr3 (308-486)||(20744654-20744832)
chr3 (338-687)||(49386779-49387132)
chr3 (338-687)||(24793752-24794102)
chr3 (423-687)||(11459536-11459804)
chr3 (302-486)||(10011806-10011990)
chr3 (225-486)||(51978386-51978638)
chr3 (338-687)||(24872622-24872973)
chr3 (568-687)||(17734682-17734803)
chr3 (568-687)||(19035951-19036072)
chr3 (343-486)||(13119213-13119356)
chr3 (324-486)||(5655225-5655387)
chr3 (324-486)||(8973153-8973315)
chr3 (324-486)||(8983708-8983870)
chr3 (324-436)||(9537442-9537554)
chr3 (324-436)||(9547768-9547880)
chr3 (324-484)||(25433142-25433302)
chr3 (324-486)||(1684850-1685012)
chr3 (324-486)||(4371662-4371824)
chr3 (324-486)||(4381403-4381565)
chr3 (324-486)||(4782216-4782378)
chr3 (303-397)||(12376840-12376934)
chr3 (324-486)||(16335012-16335174)
chr3 (324-493)||(4023723-4023892)
chr3 (343-486)||(11585-11728)
chr3 (343-486)||(2488825-2488968)
chr3 (620-687)||(12386831-12386898)
chr3 (302-373)||(20293321-20293392)
chr3 (625-687)||(11387-11448)
chr3 (324-486)||(6433035-6433197)
chr3 (625-687)||(19827629-19827691)
chr3 (213-326)||(12376719-12376832)
chr3 (324-486)||(6422608-6422770)
chr3 (498-687)||(25433497-25433686)
chr3 (602-687)||(2488448-2488529)
chr3 (602-687)||(4782021-4782102)
chr3 (370-486)||(20492376-20492492)
chr3 (602-687)||(20744283-20744364)
chr3 (620-687)||(4023526-4023593)
chr3 (636-687)||(10011607-10011657)
chr3 (621-687)||(14801827-14801892)
chr3 (638-687)||(20492647-20492696)
chr3 (602-687)||(13119017-13119098)
chr3 (602-687)||(51978060-51978141)
chr3 (625-688)||(20293650-20293712)
chr3 (653-687)||(2488272-2488306)
chr3 (498-532)||(2488603-2488637)
chr3 (653-687)||(4372171-4372205)
chr3 (653-687)||(4381912-4381946)
chr3 (653-687)||(4781845-4781879)
chr3 (653-687)||(20744107-20744141)
chr3 (656-687)||(2488360-2488391)
chr3 (656-687)||(13118929-13118960)
chr3 (656-687)||(20744195-20744226)
chr3 (656-687)||(25433743-25433774)
chr3 (656-687)||(51977884-51977915)
chr3 (656-687)||(51977972-51978003)
chr3 (653-687)||(13118841-13118875)
chr3 (288-326)||(19828014-19828052)
chr3 (288-326)||(20293276-20293314)
chr3 (59-117)||(20293036-20293096)
chr3 (59-116)||(2489562-2489621)
[»] scaffold0016 (1 HSPs)
scaffold0016 (303-687)||(15732-16106)
[»] chr5 (83 HSPs)
chr5 (303-687)||(23376359-23376733)
chr5 (308-486)||(22173036-22173214)
chr5 (308-486)||(27273965-27274143)
chr5 (308-486)||(13571464-13571642)
chr5 (308-506)||(31917106-31917304)
chr5 (308-486)||(37298598-37298776)
chr5 (308-486)||(37817892-37818070)
chr5 (302-486)||(42090302-42090486)
chr5 (25-326)||(21483782-21484085)
chr5 (308-486)||(4037763-4037941)
chr5 (308-486)||(34130273-34130451)
chr5 (302-528)||(20764642-20764868)
chr5 (338-687)||(20948165-20948516)
chr5 (338-687)||(20958534-20958885)
chr5 (303-479)||(205270-205446)
chr5 (302-479)||(19780872-19781049)
chr5 (324-486)||(32070747-32070909)
chr5 (190-326)||(20897094-20897230)
chr5 (311-482)||(20904323-20904493)
chr5 (324-486)||(26191615-26191777)
chr5 (324-486)||(26202197-26202359)
chr5 (359-687)||(36316693-36317023)
chr5 (552-687)||(19547840-19547977)
chr5 (348-493)||(27580036-27580181)
chr5 (324-486)||(8764957-8765119)
chr5 (625-687)||(13571270-13571332)
chr5 (324-506)||(21682305-21682487)
chr5 (324-486)||(21753750-21753912)
chr5 (324-486)||(21763037-21763199)
chr5 (324-486)||(30943251-30943413)
chr5 (324-486)||(30952673-30952835)
chr5 (324-436)||(18209291-18209403)
chr5 (324-436)||(18218629-18218741)
chr5 (324-436)||(18361584-18361696)
chr5 (324-436)||(18390541-18390653)
chr5 (324-436)||(33939624-33939736)
chr5 (324-436)||(33950024-33950136)
chr5 (343-486)||(11410701-11410844)
chr5 (343-486)||(27412474-27412617)
chr5 (625-687)||(4037570-4037631)
chr5 (324-486)||(19887823-19887985)
chr5 (625-687)||(31917416-31917477)
chr5 (625-687)||(37298405-37298466)
chr5 (625-687)||(37818202-37818264)
chr5 (498-687)||(18208852-18209045)
chr5 (498-687)||(18218190-18218383)
chr5 (200-326)||(20904510-20904636)
chr5 (625-687)||(22172843-22172904)
chr5 (324-486)||(37538360-37538522)
chr5 (225-326)||(205454-205555)
chr5 (303-436)||(20897239-20897372)
chr5 (498-669)||(21682660-21682834)
chr5 (602-687)||(37537988-37538069)
chr5 (602-687)||(37647099-37647180)
chr5 (625-687)||(205057-205118)
chr5 (625-687)||(20807841-20807902)
chr5 (597-687)||(20904114-20904201)
chr5 (625-687)||(27273772-27273833)
chr5 (625-687)||(34130080-34130141)
chr5 (324-486)||(37647471-37647633)
chr5 (279-326)||(19780818-19780865)
chr5 (228-326)||(34130464-34130563)
chr5 (653-687)||(19887279-19887313)
chr5 (552-687)||(20897486-20897619)
chr5 (653-687)||(21754166-21754200)
chr5 (653-687)||(21763453-21763487)
chr5 (288-326)||(31917055-31917093)
chr5 (288-326)||(37298789-37298827)
chr5 (625-687)||(42090097-42090158)
chr5 (652-687)||(22245153-22245188)
chr5 (656-687)||(37537900-37537931)
chr5 (656-687)||(37647011-37647042)
chr5 (288-326)||(4037954-4037992)
chr5 (288-326)||(13571655-13571693)
chr5 (288-326)||(22173227-22173265)
chr5 (288-326)||(27274156-27274194)
chr5 (653-687)||(37537812-37537846)
chr5 (653-687)||(37646923-37646957)
chr5 (288-326)||(37817841-37817879)
chr5 (331-376)||(21483720-21483765)
chr5 (72-117)||(20764370-20764417)
chr5 (213-265)||(20764521-20764573)
chr5 (656-684)||(36317080-36317108)
[»] scaffold0015 (4 HSPs)
scaffold0015 (14-261)||(198513-198761)
scaffold0015 (298-486)||(196980-197168)
scaffold0015 (274-326)||(197172-197224)
scaffold0015 (624-687)||(196797-196860)
[»] scaffold0591 (1 HSPs)
scaffold0591 (500-687)||(1427-1613)
[»] scaffold0005 (3 HSPs)
scaffold0005 (298-687)||(216929-217323)
scaffold0005 (324-486)||(309619-309781)
scaffold0005 (248-326)||(216848-216925)
[»] scaffold0553 (2 HSPs)
scaffold0553 (308-486)||(439-617)
scaffold0553 (625-687)||(243-304)
[»] scaffold0031 (3 HSPs)
scaffold0031 (308-486)||(111364-111542)
scaffold0031 (633-687)||(111171-111224)
scaffold0031 (227-326)||(111555-111655)
[»] scaffold0014 (7 HSPs)
scaffold0014 (302-506)||(146979-147183)
scaffold0014 (302-486)||(114130-114314)
scaffold0014 (324-486)||(233588-233750)
scaffold0014 (222-326)||(114321-114425)
scaffold0014 (213-326)||(146858-146972)
scaffold0014 (625-687)||(147311-147372)
scaffold0014 (59-117)||(146694-146754)
[»] scaffold1705 (2 HSPs)
scaffold1705 (308-486)||(1197-1375)
scaffold1705 (288-326)||(1146-1184)
[»] scaffold0141 (3 HSPs)
scaffold0141 (303-486)||(19048-19228)
scaffold0141 (213-324)||(18926-19038)
scaffold0141 (625-687)||(19374-19436)
[»] scaffold0406 (2 HSPs)
scaffold0406 (152-326)||(15526-15700)
scaffold0406 (298-363)||(15704-15769)
[»] scaffold0034 (3 HSPs)
scaffold0034 (303-532)||(7716-7944)
scaffold0034 (225-326)||(7607-7708)
scaffold0034 (641-687)||(8057-8103)
[»] scaffold0265 (3 HSPs)
scaffold0265 (200-483)||(11467-11750)
scaffold0265 (61-116)||(11319-11374)
scaffold0265 (552-687)||(11817-11950)
[»] scaffold0122 (2 HSPs)
scaffold0122 (302-471)||(23450-23619)
scaffold0122 (228-326)||(23344-23443)
[»] scaffold0764 (1 HSPs)
scaffold0764 (338-687)||(175-528)
[»] scaffold0313 (2 HSPs)
scaffold0313 (338-687)||(6081-6434)
scaffold0313 (338-687)||(20238-20591)
[»] scaffold0059 (1 HSPs)
scaffold0059 (338-686)||(39973-40320)
[»] scaffold0018 (6 HSPs)
scaffold0018 (298-484)||(58876-59060)
scaffold0018 (298-484)||(60304-60488)
scaffold0018 (298-484)||(54924-55111)
scaffold0018 (201-326)||(54795-54920)
scaffold0018 (201-326)||(58747-58872)
scaffold0018 (201-326)||(60175-60300)
[»] scaffold0121 (2 HSPs)
scaffold0121 (385-687)||(6412-6713)
scaffold0121 (201-266)||(6793-6858)
[»] scaffold0811 (1 HSPs)
scaffold0811 (338-684)||(2887-3232)
[»] scaffold0058 (6 HSPs)
scaffold0058 (302-486)||(28882-29065)
scaffold0058 (376-486)||(50086-50196)
scaffold0058 (628-687)||(49707-49765)
scaffold0058 (636-687)||(28504-28554)
scaffold0058 (653-687)||(28416-28450)
scaffold0058 (288-326)||(29072-29110)
[»] scaffold0047 (2 HSPs)
scaffold0047 (324-486)||(74329-74491)
scaffold0047 (625-687)||(74130-74191)
[»] scaffold1468 (2 HSPs)
scaffold1468 (302-391)||(1614-1703)
scaffold1468 (225-326)||(1506-1607)
[»] scaffold0611 (2 HSPs)
scaffold0611 (338-486)||(8446-8594)
scaffold0611 (626-687)||(8716-8776)
[»] scaffold0231 (2 HSPs)
scaffold0231 (376-536)||(16163-16324)
scaffold0231 (277-326)||(16350-16399)
[»] scaffold0106 (1 HSPs)
scaffold0106 (338-486)||(16993-17141)
[»] scaffold0043 (2 HSPs)
scaffold0043 (324-508)||(92451-92635)
scaffold0043 (625-687)||(92281-92342)
[»] scaffold0277 (1 HSPs)
scaffold0277 (324-486)||(18964-19126)
[»] scaffold0254 (1 HSPs)
scaffold0254 (324-486)||(7442-7604)
[»] scaffold0706 (2 HSPs)
scaffold0706 (625-687)||(1360-1421)
scaffold0706 (313-486)||(1556-1729)
[»] scaffold0086 (2 HSPs)
scaffold0086 (338-436)||(55490-55588)
scaffold0086 (625-683)||(55251-55308)
[»] scaffold0234 (3 HSPs)
scaffold0234 (343-434)||(20809-20900)
scaffold0234 (628-676)||(20556-20603)
scaffold0234 (653-687)||(20458-20492)
[»] scaffold0049 (1 HSPs)
scaffold0049 (213-315)||(4522-4624)
[»] scaffold0434 (2 HSPs)
scaffold0434 (360-436)||(14354-14430)
scaffold0434 (552-615)||(14546-14611)
[»] scaffold0118 (2 HSPs)
scaffold0118 (656-687)||(8595-8626)
scaffold0118 (653-687)||(8768-8802)


Alignment Details
Target: chr8 (Bit Score: 620; Significance: 0; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 620; E-Value: 0
Query Start/End: Original strand, 8 - 687
Target Start/End: Complemental strand, 2690357 - 2689678
Alignment:
Q  8 ctaattaatcagagatggacacgtatgagatttggtactctacaataccatgcaaatctcccaaaagcatggacctgaagatgcagaaccactattctct 107  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2690357 ctaattaatcagagatggacacgcatgagatttggtactgtacaataccatgcaaatctcccaaaagcatggacctgaagatgcagaaccactattctct 2690258  T
Q  108 ctcctgcacacaatccgatgcatatttggaaaaagtttatgttgcaactttctgatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatca 207  Q
     ||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  2690257 atcctgcacacaatccaatgcatatttggaaaaagtttatgcagcaactttctaatgtttgtgcaaaagacacaacacatgaataatgcccagaaaatca 2690158  T
Q  208 taaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacat 307  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2690157 tgaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacat 2690058  T
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2690057 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagtcagtggggcccaggacacatggcataacaccattggtcaccctctaacggc 2689958  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctt 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2689957 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaagcatacaagaaaacatctgaaaagtgtttgaagctt 2689858  T
Q  508 tagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctcccttcattcttc 607  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2689857 tagcatatgaattgatcatcactaagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctcccttcattcttc 2689758  T
Q  608 tcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2689757 tcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 2689678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 48 - 322
Target Start/End: Complemental strand, 31224761 - 31224485
Alignment:
Q  48 tacaataccatgcaaatctcccaaaagcatggacctgaagat-gcagaaccactattctctctcctgcacacaatccgatgcatatttggaaa-aagttt 145  Q
    ||||||| | |||| ||||||||||||||||| ||||||| | || || |||||| ||| |||| |||||||||||| ||||| || |||||| || |||    
T  31224761 tacaatatcttgcatatctcccaaaagcatgggcctgaagtttgctgatccactactctttctcatgcacacaatccaatgcagatctggaaacaacttt 31224662  T
Q  146 atgttgcaactttctgatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatcataaggcacgcattggataaacccagaaactcatcatac 245  Q
    ||   ||||||||||||  |||||| ||||  | |||| ||||| || |||||| ||| |||||| |||| ||||||||||||||||||||||||||| |    
T  31224661 atccagcaactttctgacttttgtgcaaaactcgcaactcatgagtattgcccacaaattcataaagcacacattggataaacccagaaactcatcattc 31224562  T
Q  246 actcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatg 322  Q
    | ||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31224561 attcataaatgatgaacccatatgaatgtcatgatgaacatcaacattctgatgaagaacacaacaacattctgatg 31224485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 14881453 - 14881275
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||| |  ||||||    
T  14881453 aacaacattctgatgttcagaatgttcactcagattttcaagtaaaagcttgtggggcccatgacacgtggcataacaccattggtcaccttacaacggc 14881354  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  14881353 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 14881275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 14893803 - 14893625
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  14893803 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 14893704  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  14893703 tatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaaca 14893625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 298 - 635
Target Start/End: Original strand, 20851763 - 20852100
Alignment:
Q  298 tgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcacc 397  Q
    ||||||| | ||||||||||||||| | |||  |||||| | ||||||| ||||||||| ||||||||||| || |||||| | || |||||||||||||    
T  20851763 tgaagaagacaacaacattctgatggttaga--gttcaccctgattttctagtaaaagctagtggggcccaggatacatggtaaaagaccattggtcacc 20851860  T
Q  398 ctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaag-aaaacatcttaaaagt 496  Q
    ||||||||||||||||||| ||| |||||||||||||||  | |||| |||||||||||||||||| ||||||| |||||||| |||||| | ||| |||    
T  20851861 ctctaacggctacaagagctcaataactctataaatagagatcaaagcctcaacattacttgcaccgttgcaaagcatacaagaaaaacaacataagagt 20851960  T
Q  497 g-tttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctctta-tattgttaaagat-aatttc 593  Q
    | |||||||||||||||    |||||||||||||  ||||| | |   || | |  ||||||||||||||||||||||| | || | |||||| || |||    
T  20851961 gttttgaagctttagca--aaaattgatcatcacaaagattccaagaagtctttaaaagtgtaaatcaattctctcttatttttctaaaagataaacttc 20852058  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    || |||| ||||| |||| ||| |||||||||||||||||||    
T  20852059 tctcttccttcttatcttttctgatttcaatcattcaaactc 20852100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 312 - 486
Target Start/End: Complemental strand, 31991415 - 31991241
Alignment:
Q  312 acattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctaca 411  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||| ||||| |||||||||||||||||||||| |  |||||||| |    
T  31991415 acattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggagcccaggacacgtggcataacaccattggtcaccttacaacggctata 31991316  T
Q  412 agagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  31991315 tgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 31991241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 302 - 506
Target Start/End: Complemental strand, 33773902 - 33773698
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  |||||||||||||||||| ||| |      
T  33773902 gaacacaacaatattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacatgtggcataacaccattggttaccttac 33773803  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttg 501  Q
    |||||||| | ||||| ||  ||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||| ||| |   ||||||    
T  33773802 aacggctatatgagccaaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaacaacttgattttgtttg 33773703  T
Q  502 aagct 506  Q
    |||||    
T  33773702 aagct 33773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 31999008 - 31998830
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| ||||||||||||||| |||||| |  || |||    
T  31999008 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccatttgtcaccttacaatggc 31998909  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || |  |||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  31998908 tatatcagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 31998830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 338 - 687
Target Start/End: Original strand, 14437735 - 14438088
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  14437735 cagaatttcaagttaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 14437834  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  14437835 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 14437934  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaac-t 634  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  ||||||||||| |    
T  14437935 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaaacct 14438034  T
Q  635 ccatacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  14438035 ccatacaaattgtaaagaaaagtctcatctagctttaggggtactaaagtgtta 14438088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 17269125 - 17269284
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    |||||||||||||  ||| ||||||||||||||   |||| |||   |||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  17269125 tcagaatgttcaccaagaatttcaagtaaaagcttttgggaccc---acacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 17269221  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  17269222 ctctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaaca 17269284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 20531093 - 20530909
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||  ||||||| || ||||| ||||||||||||||||| |||| |      
T  20531093 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggctcaggacacgtggcataacaccattgggcaccttac 20530994  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||| || | ||||||||  ||| ||||||||||  | || | || | ||  ||||||||||||||||| || |||||||||||    
T  20530993 aacggttatatgagcccaaagactttataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcacacaagaaaaca 20530909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 302 - 436
Target Start/End: Complemental strand, 11430441 - 11430307
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||   |||||||| | ||||| ||| ||||||||||||| |||| |      
T  11430441 gaacacaacaacattctgatggtcaaaatgttcacccagattttcaagtaaaagtttgtggggcctaggacacgtggaataacaccattgggcaccttac 11430342  T
Q  402 aacggctacaagagcccaagaactctataaataga 436  Q
    |||||||| | ||||||||  ||||||||||||||    
T  11430341 aacggctatatgagcccaaagactctataaataga 11430307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 21202588 - 21202426
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  21202588 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 21202489  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  21202488 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 21202426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 21213004 - 21212842
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  21213004 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 21212905  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  21212904 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 21212842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 302 - 387
Target Start/End: Original strand, 5759687 - 5759772
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacacc 387  Q
    ||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||  |||||||||| ||||| ||||||||||||    
T  5759687 gaacacaacaacattctgatggtcagaatgttcacccatattttcaagtaaaagcttgtggggcccaggacacgtggcataacacc 5759772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 324 - 436
Target Start/End: Complemental strand, 21987692 - 21987580
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  21987692 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 21987593  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  21987592 ctctataaataga 21987580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 5759566 - 5759680
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataaca 311  Q
    ||||||||||| |||||||||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| ||||    
T  5759566 cacgcattggacaaacccagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacaaca 5759665  T
Q  312 acattctgatgttca 326  Q
    |||||||||||||||    
T  5759666 acattctgatgttca 5759680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 9324788 - 9324626
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  9324788 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 9324689  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  9324688 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 9324626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 434
Target Start/End: Complemental strand, 21997226 - 21997116
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  21997226 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 21997127  T
Q  424 ctctataaata 434  Q
    |||||||||||    
T  21997126 ctctataaata 21997116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 460 - 687
Target Start/End: Complemental strand, 26361966 - 26361736
Alignment:
Q  460 caccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaa 559  Q
    |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||   |   || |    ||||| ||    
T  26361966 cacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattctaagaagtcttcaaaagtgaaa 26361867  T
Q  560 atcaat-tctctcttatattgttaaagat-aatttctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatc 657  Q
    |||||| |||||||||| || | |||||| ||| ||  ||| |||||||||||||||| || |  ||||||||| |||||||||||||||||  ||| ||    
T  26361866 atcaatatctctcttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaacctccatacaaattgtaaagaaagtc 26361767  T
Q  658 tcatctagcttta-ggggtactaaagtgtta 687  Q
    ||||||||||||| |||||||||||||||||    
T  26361766 tcatctagctttagggggtactaaagtgtta 26361736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 213 - 436
Target Start/End: Complemental strand, 23014899 - 23014683
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa-cattctgatgaagaacataaca 311  Q
    |||| |||||||||| |||||||||||||| | | |||| | |||||||||||  |||    ||| ||||| | ||| ||||||||||||||||| ||||    
T  23014899 cacgtattggataaatccagaaactcatcagatattcatcattgatgaacccagatgaagaacatcatgaataccaaacattctgatgaagaacacaaca 23014800  T
Q  312 acattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggccc-atgacacatggcataacaccattggtcaccctctaacggctac 410  Q
    ||||| |||||||||         | || ||||||||||||||||  ||||| ||| | ||||| ||||||||||||||||| ||||||  ||||||||     
T  23014799 acattatgatgttca---------cccaaattttcaagtaaaagcttgtgggcccccaggacacgtggcataacaccattggacaccctacaacggctat 23014709  T
Q  411 aagagcccaagaactctataaataga 436  Q
    | ||||||||  ||||||||||||||    
T  23014708 atgagcccaaagactctataaataga 23014683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 423 - 484
Target Start/End: Original strand, 23474146 - 23474207
Alignment:
Q  423 actctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa 484  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  23474146 actctataaatagagatcaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa 23474207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 21334605 - 21334717
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  21334605 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 21334704  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  21334705 ctctataaataga 21334717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 31998698 - 31998637
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  31998698 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 31998637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 11430549 - 11430448
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    |||||||||||||||||| ||| |||| | |||||||||||  |||    ||| ||| | |||||||||||||||||||||| |||||||||||||||||    
T  11430549 aaacccagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatggatatcaacattctgatgaagaacacaacaacattctgatgtt 11430450  T
Q  325 ca 326  Q
    ||    
T  11430449 ca 11430448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 687
Target Start/End: Complemental strand, 21987337 - 21987144
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga-gatttccaactgtat-ctttaagtgtaaatcaattctctct--tatattgttaaagataatttc 593  Q
    ||||||||||||||||||||||||||||||||||| ||||    | | | | |||  |||||||||||||||| |||  ||| |  ||||||||||        
T  21987337 tttgaagctttagcatctgaattgatcatcactgaagattctttaatatcttcttgtagtgtaaatcaattctttctgttatctctttaaagataacact 21987238  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagc-tttaggggtactaaagtgtta 687  Q
    ||| | | |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||| | ||||| ||| |||||||||||    
T  21987237 tccttcctttcttctcttgtctgatttcattcattcaagctccatacaaattgtaa-caaagtctcatctaacttttagaggtcctaaagtgtta 21987144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 687
Target Start/End: Complemental strand, 21996871 - 21996678
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga-gatttccaactgtat-ctttaagtgtaaatcaattctctct--tatattgttaaagataatttc 593  Q
    ||||||||||||||||||||||||||||||||||| ||||    | | | | |||  |||||||||||||||| |||  ||| |  ||||||||||        
T  21996871 tttgaagctttagcatctgaattgatcatcactgaagattctttaatatcttcttgtagtgtaaatcaattctttctgttatctctttaaagataacact 21996772  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagc-tttaggggtactaaagtgtta 687  Q
    ||| | | |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||| | ||||| ||| |||||||||||    
T  21996771 tccttcctttcttctcttgtctgatttcattcattcaagctccatacaaattgtaa-caaagtctcatctaacttttagaggtcctaaagtgtta 21996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 13674893 - 13675055
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||||||||  ||||  ||||| || | ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  13674893 tcagaatgtttgcccagaatttcaagttgaagcttgtgggacctaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 13674992  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  13674993 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 13675055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 20531214 - 20531100
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataaca 311  Q
    |||| ||||||| ||| ||||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| ||||    
T  20531214 cacgtattggatgaactcagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacaaca 20531115  T
Q  312 acattctgatgttca 326  Q
    |||||||||||||||    
T  20531114 acattctgatgttca 20531100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 31991109 - 31991048
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  31991109 cattcaacctccatacaaattgtta-caaagtctcatctagctttaggggtactaaagtgtta 31991048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 33773583 - 33773522
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  33773583 cattcaacctccatacaaattgtaa-caaagtcccatctagctttaggggtactaaagtgtta 33773522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 687
Target Start/End: Original strand, 17269439 - 17269488
Alignment:
Q  638 tacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  17269439 tacaaattgtaaacaaagtctcatctagctttaggggtactaaagtgtta 17269488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 11430034 - 11429953
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| || |||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  11430034 ttcttctcttgtctgatctcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 11429953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 14881143 - 14881081
Alignment:
Q  625 cattcaaactccata-caaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||| |||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  14881143 cattcaacctccataacaaattataa-caaagtctcatctagctttaggggtactaaagtgtta 14881081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 14893493 - 14893431
Alignment:
Q  625 cattcaaactccata-caaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||| |||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  14893493 cattcaacctccataacaaattataa-caaagtctcatctagctttaggggtactaaagtgtta 14893431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 20530389 - 20530355
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  20530389 aaatctcatctagctttaggggtactaaagtgtta 20530355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 20851721 - 20851759
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  20851721 aacattctgatgaagaacacaacaacattctgatgttca 20851759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 11429896 - 11429865
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  11429896 tctcatctagctttaggggtactaaagtgtta 11429865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 20531378 - 20531312
Alignment:
Q  59 gcaaatctcccaaaagcatggacctgaagatgcagaaccactat--tctctctcctgcacacaatcc 123  Q
    ||||||||||   |||||||| |||||||||||||| |||||||  ||||||||||||||| |||||    
T  20531378 gcaaatctccttgaagcatgggcctgaagatgcagatccactatcctctctctcctgcacaaaatcc 20531312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 532
Target Start/End: Complemental strand, 20530720 - 20530686
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga 532  Q
    |||||||||||| ||||||||||||||||||||||    
T  20530720 tttgaagctttatcatctgaattgatcatcactga 20530686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 23014488 - 23014427
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| |  |||||||||||||||| | ||||||||||||||  ||||||||||||||    
T  23014488 cattcaaacttctcacaaattgtaatcaaatt-tcatctagctttagaagtactaaagtgtta 23014427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 31991469 - 31991431
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  31991469 aacattctgatgaagaacacagcaacattctgatgttca 31991431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 303 - 687
Target Start/End: Complemental strand, 14248289 - 14247899
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctcta 402  Q
    |||| ||||||||||||| |||||||||||| || |||| ||||||||||||| |||||||||||||||||||||| | || |||||||||||||||  |    
T  14248289 aacacaacaacattctgaagttcagaatgtttacccagaatttcaagtaaaagtcagtggggcccatgacacatggaacaagaccattggtcacccttca 14248190  T
Q  403 acggctacaagagcccaagaactctataaatagaa-----gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa-catcttaaaagt 496  Q
    |||||||||||||||||||||||||||||||| ||     |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  14248189 acggctacaagagcccaagaactctataaatataatataagtgaaaggctcaacattacttgcaccattgcaaagcatacaagaaaaacatctgaaaagt 14248090  T
Q  497 gtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctcc 596  Q
    ||||||||||||||||| | |||||||||||||||||||||| || ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  14248089 gtttgaagctttagcatttaaattgatcatcactgagatttcaaattgtctcttaaagtgtaaatcaattctctcttattttgttaaagataatttctcc 14247990  T
Q  597 cttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    || ||||||  |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||    
T  14247989 ctccattctcttcttgtctgatttcaatcattcagactccataaaaattgtaatcaaaatctcatctaactttagtggtactaaagtgtta 14247899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 300 - 687
Target Start/End: Complemental strand, 2991671 - 2991284
Alignment:
Q  300 aagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccct 399  Q
    ||||||| ||||||||| ||| |||||||||||| || |||| ||||||||||||  || ||||||||| |||||||| || ||||||||||||||||||    
T  2991671 aagaacacaacaacattttgaagttcagaatgtttacccagaatttcaagtaaaattcaatggggcccaagacacatgacacaacaccattggtcaccct 2991572  T
Q  400 ctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtt 499  Q
    | |||||||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||| |||||||||  ||||||||||| || |  ||||||||    
T  2991571 ccaacggctacaagagcccaagaactttataaatagaagtaaaaggttcagcattacttgcatcattgcaaagtatacaagaaaatatatgtaaagtgtt 2991472  T
Q  500 tgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctccctt 599  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| ||||||| |||||||||||| |||||||| |||||||||||||||||  |||     
T  2991471 tgaagctttagcatctgaattgatcatcactgagatttcaaattgtctctttaaatgtaaatcaattttctcttatcttgttaaagataatttcctcctc 2991372  T
Q  600 cattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    | |||||||||||||| ||||||||||||||||||| |  ||||||||||  | | ||||||||||||||||||||||||||||||||    
T  2991371 ctttcttctcttgtctgatttcaatcattcaaactctactcaaattgtaaagagagtctcatctagctttaggggtactaaagtgtta 2991284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 228 - 506
Target Start/End: Original strand, 19585957 - 19586236
Alignment:
Q  228 cccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa-cattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||| ||| ||||   |||||||||||| |||    ||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  19585957 cccagaaactcatcagacattcatccttgatgaacccaaatgaagaacatcatgaatatcaatcattctgatgaagaacacaacaacattctgatgttca 19586056  T
Q  327 gaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactc 426  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  |||||||| | ||||||||  ||||    
T  19586057 gaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggctatatgagcccaaagactc 19586156  T
Q  427 tataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagct 506  Q
    ||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||| ||| |   |||||||||||    
T  19586157 tataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaacaacttgattttgtttgaagct 19586236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 296 - 687
Target Start/End: Original strand, 12770359 - 12770748
Alignment:
Q  296 gatgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtca 395  Q
    |||||||||||  |||||||| | ||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||| || |||||||||||    
T  12770359 gatgaagaacacgacaacattttaatgatcagaatgttcacccagattttcaagtaaaagctagtggggcccaggacacgtggcaaaagaccattggtca 12770458  T
Q  396 ccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa-catcttaaaa 494  Q
    ||||| |||  |||||||||| |||||||||||||||||||  | || | |||| ||||||||||||| ||||||| |||||||||||| || | ||| |    
T  12770459 ccctccaacaactacaagagctcaagaactctataaatagagatcaaggcctcagcattacttgcacctttgcaaagcatacaagaaaagcaacataaga 12770558  T
Q  495 gtg-tttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttat-attgttaaagat-aatt 591  Q
    ||| |||||||||||||||    |||||||| ||||  ||||| | |   || | |  |||||||||||| |||||||||||  || | |||||| || |    
T  12770559 gtgttttgaagctttagca--aaaattgatcgtcacaaagattccaagaagtctttaaaagtgtaaatcagttctctcttatctttctaaaagataaact 12770656  T
Q  592 tctcccttcattcttctcttgtctcatttcaatcattcaaactccataca-aattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| |||| |||||||||||||| |||||||||||||||||| |||| | ||||||    ||| |||||||||||| |||||||||||||||||||    
T  12770657 tctctcttctttcttctcttgtctgatttcaatcattcaaact-cataaacaattgt----aaagtctcatctagctataggggtactaaagtgtta 12770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 308 - 486
Target Start/End: Original strand, 45553496 - 45553674
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  45553496 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 45553595  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  45553596 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 45553674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 24540588 - 24540410
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||| ||||| |  ||||||    
T  24540588 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacacgtggcataacaccattgatcaccttacaacggc 24540489  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  24540488 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 24540410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 303 - 687
Target Start/End: Original strand, 9007225 - 9007610
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctcta 402  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||    ||| | |||| ||||| |||||||||||||||| | | | |  |    
T  9007225 aacataacaacattctgatggtcagaatgttcacccagattttcaagtaaaattttgtgcgtcccaagacacgtggcataacaccattgattatcttaca 9007324  T
Q  403 acggctacaagagcccaagaactctataaatagaagtgaaaggctcaaca-ttacttgcaccattgcaaaacatacaagaaaa-catcttaaaagtgttt 500  Q
    ||  ||| |  | ||||| |||||||||||||||  | |||||||||||| |||||| || | ||||||| |||||||||||| || | ||| |||||||    
T  9007325 acatctatatcatcccaaaaactctataaatagatatcaaaggctcaacaattactttcaactttgcaaagcatacaagaaaaacaacataagagtgttt 9007424  T
Q  501 -gaagcttt-agcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctccct 598  Q
     |||||||| || |    |||||||||||||  ||||| | |   || | |  |||||||||| |||||||| |||| || |||||| ||| |||||| |    
T  9007425 tgaagcttttagaaaa--aattgatcatcacaaagattccaagaagtctttaaaagtgtaaataaattctctgttatcttcttaaagttaacttctcctt 9007522  T
Q  599 tcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
     ||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  9007523 ccat-cttctcttgtctgattttaatcattcaaactccatacaaattgtaaacaaattctcatctagctttagaggtactaaagtgtta 9007610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 71 - 326
Target Start/End: Original strand, 9006951 - 9007216
Alignment:
Q  71 aaagcatggacctgaagatgcagaaccactattctctctcctgcacacaatccgatgcatatttggaaaaagtttatg-----tt-----gcaactttct 160  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||||||||| ||||| || ||||  || |||||      ||     ||||  ||||    
T  9006951 aaagcatgaacctgaagatgcagatccactactctctctcctgcacacaatccaatgcaaatatggagcaactttatccaactttatccagcaagattct 9007050  T
Q  161 gatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatga 260  Q
     |||| |||| |||||  || ||  ||| ||| |||||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  9007051 aatgtatgtggaaaagttactacttatggatattgcccagaaaatcatatgaaacgcattggataaacccagaaactcatcatacattcatatatgatga 9007150  T
Q  261 acccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgttca 326  Q
    |||||| |||   || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9007151 acccaaatgaagatcttgatgaacatcaacattctgatgaagaacacaacaacattctgatgttca 9007216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 552 - 687
Target Start/End: Complemental strand, 15988201 - 15988061
Alignment:
Q  552 aagtgtaaatcaattctctcttatattgttaaagataat-ttctcccttcattcttct---cttgtctcatttcaatcattcaaact-ccatacaaattg 646  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||||||||||||||   ||||||| |||||||||||||||||| ||| ||||||||    
T  15988201 aagtgtaaatcaattctctcttatctttttaaagataaaattctcccttcattcttcttctcttgtctgatttcaatcattcaaacttccaaacaaattg 15988102  T
Q  647 taatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||  ||| ||||||||||||||||||||||||||||||||    
T  15988101 taaagaaagtctcatctagctttaggggtactaaagtgtta 15988061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 338 - 687
Target Start/End: Complemental strand, 5615204 - 5614851
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  5615204 cagaatttcaagttaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 5615105  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  5615104 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 5615005  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaac-t 634  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  ||||||||||| |    
T  5615004 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaaacct 5614905  T
Q  635 ccatacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  5614904 ccatacaaattgtaaagaaaagtctcatctagctttaggggtactaaagtgtta 5614851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 302 - 479
Target Start/End: Original strand, 10415988 - 10416165
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||||||||||| |||| |      
T  10415988 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacatgtggcataacaccattgggcaccttac 10416087  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaa 479  Q
    |||||||| | ||||||||  |||| |||||||||  | || | || | ||  ||||||||||||||||| |||||||    
T  10416088 aacggctatatgagcccaaagactccataaatagagatcaaggccttaccaaaacttgcaccattgcaaagcatacaa 10416165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 302 - 483
Target Start/End: Original strand, 12491618 - 12491799
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| | ||||||||||| |||  ||||||||||||    | |||| ||| ||||| ||||||||||||||||| || |||      
T  12491618 gaacacaacaacattctgatggttagaatgttcacccagggtttcaagtaaaaatatgcggggaccaagacacgtggcataacaccattggacatcctac 12491717  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaa 483  Q
    |||||||| | ||||||||  ||||||||||||||  |  |||||||| ||||||||||||||||||||| |||||||||||    
T  12491718 aacggctatatgagcccaaagactctataaatagagatctaaggctcatcattacttgcaccattgcaaagcatacaagaaa 12491799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 160 - 263
Target Start/End: Original strand, 12770253 - 12770356
Alignment:
Q  160 tgatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatg 259  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||  ||||||||||||||| | ||||||| ||| ||||||||||||| |||||||||    
T  12770253 tgatgtttgtgcaaaagacacaacacatgaatattgcccagaaaacaataaggcacgcattgaaaaaacccataaattcatcatacactcgtaaatgatg 12770352  T
Q  260 aacc 263  Q
    ||||    
T  12770353 aacc 12770356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 338 - 687
Target Start/End: Complemental strand, 13285452 - 13285104
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||  ||||||| ||  |||||||||||  ||  ||||||||||||||||||     
T  13285452 cagaatttcaagtgaaagttggtgggtcccaggacacgtggcataagaccggtggtcactcttcaacggctacaaaggc--aagaactctataaatagag 13285355  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  13285354 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 13285255  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  |||||||||||||    
T  13285254 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaaactc 13285155  T
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||| |||| |||| ||| ||||||||||||||||||||||||||||    
T  13285154 catacaaat-gtaaacaaagtcttatctagctttaggggtactaaagtgtta 13285104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 338 - 687
Target Start/End: Original strand, 31825032 - 31825384
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  31825032 cagaatttcaagttaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 31825131  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  31825132 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 31825231  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    | |   || |    ||||| |||||||| |||| ||||| || | |||||||| | ||  ||| |||||||||||||||| || |  |||||||||  ||    
T  31825232 caagaagtcttcaaaagtgcaaatcaatatctcccttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaacttc 31825331  T
Q  636 catacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  31825332 catacaaattgtaaagaaaagtctcatctagctttaggggtactaaaatgtta 31825384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 506
Target Start/End: Original strand, 12515440 - 12515627
Alignment:
Q  319 gatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagccc 418  Q
    |||| ||||||||||||| |||| |||||||||||||   | |||| ||| ||||| ||||||||||||||||| ||||||  ||||| || | ||||||    
T  12515440 gatggtcagaatgttcacccagagtttcaagtaaaagtatgcggggaccaagacacgtggcataacaccattggacaccctacaacggatatatgagccc 12515539  T
Q  419 aagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagct 506  Q
    ||  ||||||||||||||  |  |||||||| |||||||| ||||||||||||  ||||||||||||| ||| |   |||||||||||    
T  12515540 aaagactctataaatagagttctaaggctcatcattacttacaccattgcaaaggatacaagaaaacaacttgattttgtttgaagct 12515627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 370 - 687
Target Start/End: Original strand, 42595728 - 42596047
Alignment:
Q  370 gacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgca 469  Q
    ||||| |||||||| ||||  |||||| ||| |||||||||||  || |||||||||||||||||||  | ||   |||| ||| ||   || | |||||    
T  42595728 gacacgtggcataagaccagcggtcactctccaacggctacaaaggctcaagaactctataaatagagatcaagacctcagcataacacacatctttgca 42595827  T
Q  470 aaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaat-tct 568  Q
    || |||||||| ||||| | ||| |||||||||| ||||||||     ||||||||||||  ||||| | |   ||||    |||||||||||||  | |    
T  42595828 aagcatacaaggaaacaacataagagtgtttgaaactttagcaaaaacattgatcatcacaaagattccaagaagtattcaaaagtgtaaatcaacattt 42595927  T
Q  569 ctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagct 667  Q
    ||||||| || |||||||||| | ||  ||| |||||||||||||||| || |  ||||||||||||||||||||||||||| |||| ||||||||||||    
T  42595928 ctcttatctttttaaagataaatatcctcctccattcttctcttgtctgatctatatcattcaaactccatacaaattgtaaacaaagtctcatctagct 42596027  T
Q  668 ttaggggtactaaagtgtta 687  Q
    ||||||||| |||| |||||    
T  42596028 ttaggggtattaaaatgtta 42596047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 341 - 484
Target Start/End: Complemental strand, 15988396 - 15988254
Alignment:
Q  341 attttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtg 440  Q
    |||||||||||||||  ||||||||||| |||||||| || || |||||||| ||||||  |||||||| | |||||||| ||||||||||||| |  |     
T  15988396 attttcaagtaaaagttagtggggcccaggacacatgtcacaagaccattggacaccctacaacggctatatgagcccaaaaactctataaataaagatc 15988297  T
Q  441 aaaggctcaacattacttgcaccattgcaaaacatacaagaaaa 484  Q
    |||| || | ||||||||||||||||||||| || |||||||||    
T  15988296 aaagtcttagcattacttgcaccattgcaaagca-acaagaaaa 15988254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 11626119 - 11625957
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  11626119 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 11626020  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  11626019 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 11625957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 26362956 - 26362794
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  26362956 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 26362857  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  26362856 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 26362794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 27989148 - 27989310
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  27989148 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 27989247  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || | |  | ||  ||||||||||||||||| ||||||||||||||    
T  27989248 ctctataaatagatatcaaggtcgtagcaaaacttgcaccattgcaaagcatacaagaaaaca 27989310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 5381570 - 5381408
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  5381570 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 5381471  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  5381470 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 5381408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 5391208 - 5391046
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  5391208 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 5391109  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  5391108 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 5391046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 5927442 - 5927604
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  5927442 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 5927541  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  5927542 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 5927604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 32098687 - 32098849
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| |||||||||||||||| |||||| ||||||  |||||||| | ||||||||| |    
T  32098687 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacatcattggacaccctacaacggctatatgagcccaagga 32098786  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  32098787 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 32098849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 32109124 - 32109286
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| |||||||||||||||| |||||| ||||||  |||||||| | ||||||||| |    
T  32109124 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacatcattggacaccctacaacggctatatgagcccaagga 32109223  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  32109224 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 32109286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 46497421 - 46497583
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  46497421 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 46497520  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  46497521 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 46497583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 46508033 - 46508195
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  46508033 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 46508132  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  46508133 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 46508195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 6534791 - 6534903
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  6534791 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 6534890  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  6534891 ctctataaataga 6534903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 6545112 - 6545224
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  6545112 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 6545211  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  6545212 ctctataaataga 6545224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 687
Target Start/End: Original strand, 41027944 - 41028264
Alignment:
Q  370 gacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgca 469  Q
    ||||| |||||||| |||| | ||||| ||| |||||||||||  || |||||||||||||||||||  | ||   |||| ||| ||   |||  |||||    
T  41027944 gacacgtggcataagaccagtagtcactctcaaacggctacaaaggctcaagaactctataaatagagatcaagacctcagcataacacacacatttgca 41028043  T
Q  470 aaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaat-tct 568  Q
    || |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  ||||| | |   || |    |||||||||||||| | |    
T  41028044 aagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaacattgatcatcacaaagattccaagaagtcttcaaaagtgtaaatcaatattt 41028143  T
Q  569 ctcttatattgttaaagat-aatttctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagct 667  Q
    ||||||| ||   |||||| ||| ||||  | |||| ||||| ||||| || |  ||||||||||||||||||||||||||| |||| |||||| |||||    
T  41028144 ctcttatctttgcaaagatgaatctctcattccattattctcctgtctgatctatatcattcaaactccatacaaattgtaaacaaagtctcatatagct 41028243  T
Q  668 tta-ggggtactaaagtgtta 687  Q
     || |||||||||||||||||    
T  41028244 atagggggtactaaagtgtta 41028264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 44908027 - 44908139
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  44908027 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 44908126  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  44908127 ctctataaataga 44908139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 486
Target Start/End: Original strand, 26307457 - 26307584
Alignment:
Q  359 gtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattactt 458  Q
    ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |||||||||||||| |     | || | ||  ||||    
T  26307457 gtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaggactctataaatagagggcttggccttagcaaaactt 26307556  T
Q  459 gcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| ||||||||||||||    
T  26307557 gcaccattgcaaagcatacaagaaaaca 26307584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 8501356 - 8501518
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| |  |||||||  |    
T  8501356 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatataagcccaaaga 8501455  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  8501456 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 8501518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 8511826 - 8511988
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| |  |||||||  |    
T  8511826 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatataagcccaaaga 8511925  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  8511926 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 8511988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 9534695 - 9534634
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  9534695 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 9534634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 9534995 - 9534833
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||| ||| | ||||||||  |    
T  9534995 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacgactatatgagcccaaaga 9534896  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  9534895 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 9534833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 9545278 - 9545116
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||| ||| | ||||||||  |    
T  9545278 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacgactatatgagcccaaaga 9545179  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  9545178 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 9545116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 16131669 - 16131507
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||| ||||||||||| ||||||  |||||||| | ||||||||  |    
T  16131669 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcagaacaccattggacaccctacaacggctatatgagcccaaaga 16131570  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  16131569 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 16131507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 16142218 - 16142056
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||| ||||||||||| ||||||  |||||||| | ||||||||  |    
T  16142218 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcagaacaccattggacaccctacaacggctatatgagcccaaaga 16142119  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  16142118 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 16142056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 19586351 - 19586412
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  19586351 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 19586412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 43983784 - 43983946
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||||||||  ||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  43983784 tcagaatgtttgcccagaatttcaagtttaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 43983883  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  43983884 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 43983946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 434
Target Start/End: Original strand, 44897602 - 44897712
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  44897602 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 44897701  T
Q  424 ctctataaata 434  Q
    |||||||||||    
T  44897702 ctctataaata 44897712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 12491510 - 12491611
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    ||||| |||||||||||||||| |||| | |||||||||||  |||    ||| ||||| |||||||||||||||||||||| | |||||||||||||||    
T  12491510 aaacctagaaactcatcatacattcatcattgatgaacccagatgaagaacatcatgaatatcaacattctgatgaagaacacagcaacattctgatgtt 12491609  T
Q  325 ca 326  Q
    ||    
T  12491610 ca 12491611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 338 - 532
Target Start/End: Complemental strand, 7019156 - 7018962
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| ||||||||||||||  ||| | |||| |||||||||||| |||| ||||| ||||||  |||||||| | ||||||||  | ||||||||||||     
T  7019156 cagaatttcaagtaaaagcttgtgcgacccaggacacatggcattacacaattggacaccctacaacggctatatgagcccaaagaatctataaatagag 7019057  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagc-atctgaattgatcatcactga 532  Q
     | |  | || ||||  |||||||||||| |||| ||||||| |||||| | | ||| ||||||||||| | || || ||||||||||||||||||    
T  7019056 atcatggccttaacaaaacttgcaccatttcaaagcatacaaaaaaacaac-tgaaattgtttgaagctcttgcaatttgaattgatcatcactga 7018962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 338 - 532
Target Start/End: Complemental strand, 7034518 - 7034324
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| ||||||||||||||  ||| | |||| |||||||||||| |||| ||||| ||||||  |||||||| | ||||||||  | ||||||||||||     
T  7034518 cagaatttcaagtaaaagcttgtgcgacccaggacacatggcattacacaattggacaccctacaacggctatatgagcccaaagaatctataaatagag 7034419  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagc-atctgaattgatcatcactga 532  Q
     | |  | || ||||  |||||||||||| |||| ||||||| |||||| | | ||| ||||||||||| | || || ||||||||||||||||||    
T  7034418 atcatggccttaacaaaacttgcaccatttcaaagcatacaaaaaaacaac-tgaaattgtttgaagctcttgcaatttgaattgatcatcactga 7034324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 9544978 - 9544917
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| || |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  9544978 cattcaaccttcatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 9544917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 10415867 - 10415981
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa-cattctgatgaagaacataaca 311  Q
    |||| ||||||||||||||||||||||||| ||| |||| | ||||||||| |  |||    ||| ||||| | ||| ||||||||||||||||||| ||    
T  10415867 cacgtattggataaacccagaaactcatcagacattcatcattgatgaacctagatgaagaacatcatgaataccaaacattctgatgaagaacatagca 10415966  T
Q  312 acattctgatgttca 326  Q
    |||||||||||||||    
T  10415967 acattctgatgttca 10415981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 15372169 - 15372267
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaataga 436  Q
    |||| ||||||||||||||   |||| |||| ||||||||||||||||||||||| ||||||  || ||||| | ||||||||  ||||||||||||||    
T  15372169 cagaatttcaagtaaaagcttatgggacccaggacacatggcataacaccattggacaccctacaatggctatatgagcccaaagactctataaataga 15372267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 27989609 - 27989670
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  27989609 cattcaacctccatacaaattgtaa-caaagtctcatctagctttagaggtactaaagtgtta 27989670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 42621696 - 42621757
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  42621696 cattcaacctctatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 42621757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 14944576 - 14944674
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaataga 436  Q
    |||| ||||||||||||||   |||| |||| ||||||||||||||||||||||| ||||||  || ||||| | || |||||  ||||||||||||||    
T  14944576 cagaatttcaagtaaaagcttatgggacccaggacacatggcataacaccattggacaccctacaatggctatatgatcccaaagactctataaataga 14944674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 604 - 687
Target Start/End: Complemental strand, 24540117 - 24540038
Alignment:
Q  604 cttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  24540117 cttctcttgtctgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 24540038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 687
Target Start/End: Original strand, 12515731 - 12515812
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| | ||||||||||||||| ||| | |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  12515731 ttcttctcttgtttgatttcaatcattcaagctcgaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 12515812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 687
Target Start/End: Original strand, 45553965 - 45554046
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||   |||||    | ||||||||||||||||||||||||||||||||    
T  45553965 ttcttctcttgtctgatttcaatcattcaagcttcaaacatcctgtaa----agtctcatctagctttaggggtactaaagtgtta 45554046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 12515318 - 12515412
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatg 322  Q
    ||||| |||||||||||||||| |||| | |||||||||||  |||    ||| ||||| |||||||||||||||||||||   ||||||||||||||    
T  12515318 aaacctagaaactcatcatacattcatcattgatgaacccagatgaagaacatcatgaatatcaacattctgatgaagaac---acaacattctgatg 12515412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 509
Target Start/End: Complemental strand, 12827088 - 12826917
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||  |||||||| |||| ||||||| ||| |||||||||||  || ||||||||||| |||||||     
T  12827088 cagaatttcaagtgaaagttggtgggtcccaggacatgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctacaaatagag 12826989  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagcttta 509  Q
     | ||   ||||| || ||   |||| ||||||| |||||||||||||| | ||| ||||||||| ||||||    
T  12826988 atcaagacctcaatataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgacgcttta 12826917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 24539896 - 24539862
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  24539896 aaatctcatctagctttaggggtactaaagtgtta 24539862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 43984291 - 43984325
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  43984291 aaatctcatctagctttaggggtactaaagtgtta 43984325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 45553445 - 45553483
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  45553445 aacattctgatgaagaacacaacaacattctgatgttca 45553483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 45554188 - 45554222
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  45554188 aaatctcatctagctttaggggtactaaagtgtta 45554222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 687
Target Start/End: Complemental strand, 7018850 - 7018801
Alignment:
Q  638 tacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| || |||| ||||||||||||||||||||||| |||||    
T  7018850 tacaaattgtaaacagaatcacatctagctttaggggtactaaaatgtta 7018801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 687
Target Start/End: Complemental strand, 7034212 - 7034163
Alignment:
Q  638 tacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| || |||| ||||||||||||||||||||||| |||||    
T  7034212 tacaaattgtaaacagaatcacatctagctttaggggtactaaaatgtta 7034163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 639 - 687
Target Start/End: Original strand, 14946728 - 14946776
Alignment:
Q  639 acaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||| || |||||||||||| ||||||| |||||||||||||    
T  14946728 acaaattgtaagcagaatctcatctagatttagggatactaaagtgtta 14946776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 639 - 687
Target Start/End: Original strand, 15374321 - 15374369
Alignment:
Q  639 acaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||| || |||||||||||| ||||||| |||||||||||||    
T  15374321 acaaattgtaagcagaatctcatctagatttagggatactaaagtgtta 15374369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 10416530 - 10416561
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  10416530 tctcatctagctttaggggtactaaagtgtta 10416561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 45554103 - 45554134
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  45554103 tctcatctagctttaggggtactaaagtgtta 45554134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 8340812 - 8340873
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| |  |||||||||||| ||| |||||||||  |||||||||||||||||||||    
T  8340812 cattcaaacttcccacaaattgtaat-aaagtctcatctaattttaggggtactaaagtgtta 8340873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 654
Target Start/End: Complemental strand, 12826843 - 12826781
Alignment:
Q  592 tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaa 654  Q
    ||||||| ||||| ||| |||||| || |  ||||||||||||||||||||||||||| ||||    
T  12826843 tctccctccattcctcttttgtctgatctatatcattcaaactccatacaaattgtaaacaaa 12826781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 24540639 - 24540601
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  24540639 aacattctgatgaagaacacagcaacattctgatgttca 24540601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 27989724 - 27989758
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||| |||||||||||||||||||||||||    
T  27989724 aaatctcatatagctttaggggtactaaagtgtta 27989758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 14 - 525
Target Start/End: Original strand, 21109254 - 21109765
Alignment:
Q  14 aatcagagatggacacgtatgagatttggtactctacaataccatgcaaatctcccaaaagcatggacctgaagat-gcagaaccactattctctctcct 112  Q
    ||||| |||||||||||| |||||| |||| |  ||||||| | |||| ||||||||||||| ||| ||||||||| ||||||||||||||||||||||     
T  21109254 aatcaaagatggacacgt-tgagatatggttcagtacaatatcttgcatatctcccaaaagcttgggcctgaagattgcagaaccactattctctctccc 21109352  T
Q  113 gcacacaatccgatgcatatttggaaaaagtttatgttgcaactttctgatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatcataagg 212  Q
    ||||| ||||| ||||| || ||||| || |||||   ||||||||||||| | |||  |||||  ||||| ||||| || |||||| ||| |||| |||    
T  21109353 gcaca-aatccaatgcagatatggaataactttatccagcaactttctgatatatgtacaaaagtaacaactcatgagtattgcccataaattcatcagg 21109451  T
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaa 312  Q
    ||| |||||||||||||| |||||||||||||||||||| |||||| ||||||  |||   ||||||||||||||||||||||||  ||||||| |||||    
T  21109452 cacacattggataaaccctgaaactcatcatacactcatcaatgataaacccagatgaagatcatgatgaacatcaacattctgacaaagaacacaacaa 21109551  T
Q  313 cattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaa 412  Q
    | |||||||| |||||||||| ||  ||||||||||||||||| ||||||| |||| |||||||| |||||||||||||| ||||||| |||||||| |     
T  21109552 cgttctgatggtcagaatgtttacctagattttcaagtaaaagtcagtggg-cccaagacacatgacataacaccattggccaccctccaacggctatat 21109650  T
Q  413 gagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaa-gaaaacatcttaaaagtg-tttgaagctttag 510  Q
    |||||||| |||| ||||||||||  | ||||||||||||||||||||||||||||||| ||||||| ||||||| | | ||| || |||||||||||||    
T  21109651 gagcccaaaaactttataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaaggaaaacaaccttaaattgttttgaagctttag 21109750  T
Q  511 catctgaattgatca 525  Q
    |||||||||||||||    
T  21109751 catctgaattgatca 21109765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 71 - 687
Target Start/End: Complemental strand, 70113 - 69487
Alignment:
Q  71 aaagcatggacctgaagatgcagaaccactattctctctcctgcacacaatccgatgcatatttggaaaaagtttatgttgcaactttctgatgtttgtg 170  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| || |||   || |||||   ||||| || |||||| ||||    
T  70113 aaagcatgggcctgaagatgcagatccactattctctctcctgcacacaatccaatgcagatctggtgcaactttatccagcaacattatgatgtatgtg 70014  T
Q  171 taaaagacacaacacatgaataatgcccagaaaatcataaggcacgcattggataaacccagaaactcatca-tacactcataaatgatgaacccaactg 269  Q
     |||||  || |   ||| ||| |||||||||||||||| |  ||||||  || ||||||| ||||||||   |  | ||||||||||||||||||| ||    
T  70013 gaaaagttactaattatggatattgcccagaaaatcatatgaaacgcatatgacaaacccataaactcatgtgttaattcataaatgatgaacccaaatg 69914  T
Q  270 attgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagcca-gtggggccca 368  Q
    |    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  |||| |||||| ||||||    | || |||||    
T  69913 aagaccatgatgaacatcaacattctgatgaagaacataacaacattctgatggtcagaatgtttatccagaatttcaattaaaagttttgcggagccca 69814  T
Q  369 tgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgc 468  Q
     ||||| |||||||||||||||||||||| |  |||||||| | |||||||| |||||||||||||||  | ||||| ||||||||||||||||||||||    
T  69813 agacacgtggcataacaccattggtcaccttacaacggctatatgagcccaaaaactctataaatagagatcaaaggatcaacattacttgcaccattgc 69714  T
Q  469 aaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctg-aattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattc 567  Q
    ||| |||||||||||||| |  | || |||||||||||||||||| || |||||||||||||  ||||| | |   |||| ||| || ||||||||||||    
T  69713 aaatcatacaagaaaacaacagagaa-tgtttgaagctttagcatttgaaattgatcatcacaaagattccaagaagtattttttagcgtaaatcaattc 69615  T
Q  568 ----tctcttatattgttaaagat-aatttctc---ccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctc 659  Q
        |||||||| || | |||||| || | |||   ||||  ||||||| |||| | ||||||| |||||||||||||||||||||||||||||| ||||    
T  69614 tctttctcttatcttttcaaagataaactcctccctcctttcttcttcttttgtttgatttcaaacattcaaactccatacaaattgtaatcaaagtctc 69515  T
Q  660 atctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||    
T  69514 atctagctttaggggtactaaagtgtta 69487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 288 - 479
Target Start/End: Complemental strand, 37862835 - 37862644
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacacc 387  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  |||||||||| |    
T  37862835 aacattctaatgaagaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacatgtggcataacatc 37862736  T
Q  388 attggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaa 479  Q
    |||||||||| |  |||||||| | |||||||| |||||||||||||||  | ||||||||| ||||||||||||||||||||| |||||||    
T  37862735 attggtcaccttacaacggctatatgagcccaaaaactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaa 37862644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 308 - 486
Target Start/End: Original strand, 45191131 - 45191309
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  45191131 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 45191230  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  45191231 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 45191309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 302 - 532
Target Start/End: Original strand, 12570873 - 12571102
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| |||| ||||| |||||||||||||||||||||| | |    
T  12570873 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtgggacccaggacacgtggcataacaccattggtcaccttat 12570972  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttg 501  Q
    | |||||| | || ||||| |||||||||||||| ||  ||||||||||||||||||||| ||||||||| ||||||||||||||  |  ||| ||||||    
T  12570973 agcggctatatgaacccaaaaactctataaatag-agacaaaggctcaacattacttgcatcattgcaaagcatacaagaaaaca-atagaaattgtttg 12571070  T
Q  502 aagctttagc-atctgaattgatcatcactga 532  Q
    ||||| | || || ||||||||||||||||||    
T  12571071 aagctcttgcaatttgaattgatcatcactga 12571102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 359 - 687
Target Start/End: Original strand, 19342649 - 19342980
Alignment:
Q  359 gtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattactt 458  Q
    ||||| |||| ||||| |||||||| || | ||||||| ||| |||||| ||||  || |||| ||||||||||||||  | ||   |||||||| ||      
T  19342649 gtgggtcccaggacacgtggcataagactagtggtcactctccaacggccacaaaggctcaaggactctataaatagagatcaagacctcaacataacac 19342748  T
Q  459 gcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgta 558  Q
     |||| |||||||||||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  ||||| | |   || |    |||||||    
T  19342749 acacctttgcaaaacatacaagaaaacaacataagagtgtttgaagctttagcaaaaacattgatcatcacaaagattccaagaagtcttcaaaagtgta 19342848  T
Q  559 aatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaa- 655  Q
    ||||||| | |||||||| || |||||||||| | ||||||| |||| ||||||||||| || |  ||||||||||||||||||||||||||| |||||     
T  19342849 aatcaatatttctcttatctttttaaagataaatctctccctccatttttctcttgtctgatctatatcattcaaactccatacaaattgtaaacaaaag 19342948  T
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||| ||||||||||    
T  19342949 tctcatctagctttaggggtattaaagtgtta 19342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 359 - 687
Target Start/End: Original strand, 22902474 - 22902804
Alignment:
Q  359 gtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattactt 458  Q
    ||||| |||||||||| |||||||| |||| ||||||| ||| |||||||||||  ||  ||||||||||||||||||  | |||  |||||||| ||      
T  22902474 gtgggtcccatgacacgtggcataagaccagtggtcactctccaacggctacaaaggcttaagaactctataaatagagatcaaaacctcaacataacac 22902573  T
Q  459 gcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgta 558  Q
     |||| ||||||| |||||||||||||| | ||| |||||||||||||||| ||     ||||||||| ||  ||||| | |   || |    |||||||    
T  22902574 acacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttaacaaaaacattgatcataacaaagattccaagaagtcttcaaaagtgta 22902673  T
Q  559 aatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaat 656  Q
    ||||||| | |||||||| || |||||| ||| | ||||||| |||||||||||||||| || |  |||||| |||||||||||||||||||| |||| |    
T  22902674 aatcaatatttctcttatctttttaaaggtaaatctctccctccattcttctcttgtctgatctatatcatttaaactccatacaaattgtaaacaaagt 22902773  T
Q  657 ctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| || |||||||||||||||    
T  22902774 ctcatctagcttaagaggtactaaagtgtta 22902804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 302 - 436
Target Start/End: Original strand, 574553 - 574687
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |      
T  574553 gaacacaacaacattctgatgttcagaatgttcacccaaattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 574652  T
Q  402 aacggctacaagagcccaagaactctataaataga 436  Q
    |||||||| | ||||||||  ||||||||||||||    
T  574653 aacggctatatgagcccaaagactctataaataga 574687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 3605696 - 3605512
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||| ||||| ||||||||||||| |||||||||||||||||||  ||||| |||| ||||| ||||||||||||||| | |||| |      
T  3605696 gaacacaacaacattatgatggtcagaatgttcacccagattttcaagtaaaagcttgtgggacccaggacacgtggcataacaccattaggcaccttac 3605597  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||| | |||| |||  ||||||||||||||  | |||| || | ||  ||||||||||||||||||||||||||||||||    
T  3605596 aacggctatatgagctcaaagactctataaatagagatcaaagccttagcaaaacttgcaccattgcaaaacatacaagaaaaca 3605512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 600 - 687
Target Start/End: Original strand, 21109792 - 21109879
Alignment:
Q  600 cattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21109792 cattcttctcttgtctgatttcaatcattgaaacttcatacaaattgtaatcaaaatctcatatagctttaggggtactaaagtgtta 21109879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 44638693 - 44638531
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||||||||||||||  ||||| |||||||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  44638693 tcagaatgtttgcccagaatttcaagtaaaagcttgtgggacccatgacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 44638594  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || | || | ||  ||||||||||||||||||||||||||||||||    
T  44638593 ctctataaatagagatcaaggtcttagcaaaacttgcaccattgcaaaacatacaagaaaaca 44638531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 460 - 687
Target Start/End: Complemental strand, 22908419 - 22908190
Alignment:
Q  460 caccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaa 559  Q
    |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  ||||| | |   || |    ||||||||    
T  22908419 cacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattccaagaagtcttcaaaagtgtaa 22908320  T
Q  560 atcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatc 657  Q
    |||||| | |||||||| || |||||||||| | ||||||| ||||| |||||| ||| || |  |||| |||||||||||||||||||||| |||| ||    
T  22908319 atcaatatttctcttatctttttaaagataaatctctccctccattcctctcttatctaatctatatcaatcaaactccatacaaattgtaaacaaagtc 22908220  T
Q  658 tcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||    
T  22908219 tcatctagctttaggggtactaaagtgtta 22908190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 22687438 - 22687259
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaa-gccagtggggcccatgacacatggcataacaccattggtcaccctctaacgg 406  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||| |   ||||| |||| ||||  |||||||||||||| ||||||| |  |||||    
T  22687438 aacaacattctgatgttcaaaatgttcacccaaattttcaagtaaaaagattgtgggacccaggacatgtggcataacaccatcggtcaccttacaacgg 22687339  T
Q  407 ctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||| | |||||||| |||||||||||||||  | |||| |||  |||||||||||||| |||| | ||||||||||||||    
T  22687338 ctatatgagcccaaaaactctataaatagagatcaaagactcggcattacttgcaccactgcatagcatacaagaaaaca 22687259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 552 - 687
Target Start/End: Complemental strand, 27159456 - 27159319
Alignment:
Q  552 aagtgtaaatcaat-tctctcttatattgttaaagataa-tttctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaa 649  Q
    |||||||||||||| |||||||||| || | |||||||| ||||  ||| |||||||||||||||| || |  ||||||||| |||||||||||||||||    
T  27159456 aagtgtaaatcaatatctctcttatcttttcaaagataaatttcaacctccattcttctcttgtctgatctatatcattcaacctccatacaaattgtaa 27159357  T
Q  650 tcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
      ||| ||||||||||||||||||||||||||||||||    
T  27159356 agaaagtctcatctagctttaggggtactaaagtgtta 27159319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 552 - 687
Target Start/End: Complemental strand, 27169804 - 27169667
Alignment:
Q  552 aagtgtaaatcaat-tctctcttatattgttaaagataa-tttctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaa 649  Q
    |||||||||||||| |||||||||| || | |||||||| ||||  ||| |||||||||||||||| || |  ||||||||| |||||||||||||||||    
T  27169804 aagtgtaaatcaatatctctcttatcttttcaaagataaatttcaacctccattcttctcttgtctgatctatatcattcaacctccatacaaattgtaa 27169705  T
Q  650 tcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
      ||| ||||||||||||||||||||||||||||||||    
T  27169704 agaaagtctcatctagctttaggggtactaaagtgtta 27169667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 406 - 684
Target Start/End: Complemental strand, 15475154 - 15474877
Alignment:
Q  406 gctacaagagcccaaga-actctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaag 504  Q
    ||||||||||  ||||| |||||||||||||||||| |||||||||||||||   |||| ||||||| |||||||||||||| | ||| |||||||||||    
T  15475154 gctacaagaggtcaagacactctataaatagaagtggaaggctcaacattacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaag 15475055  T
Q  505 ctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagat-aatttctcccttcat 602  Q
    ||||||||     ||||||  ||||  ||||| | |   |||| |  | ||||  |||||| | |||||||| || |||||||| ||||||||| | | |    
T  15475054 ctttagcaaaaacattgat-gtcacaaagattccaagaagtatttaaacgtgtgtatcaatatttctcttatctttttaaagataaatttctccttcctt 15474956  T
Q  603 tcttctcttgtctcatttcaatcattcaaactc-catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtg 684  Q
    | ||||||||||| ||||||||||||||||||| || |||||||||    ||| |||||||||||||||  ||||||||||||    
T  15474955 tattctcttgtctgatttcaatcattcaaactcacaaacaaattgt----aaagtctcatctagctttacaggtactaaagtg 15474877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 16902249 - 16902087
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||| |||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  16902249 tcagaatgtttgcccagaattttaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 16902150  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  16902149 ctctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 16902087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 16995640 - 16995478
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||| |||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  16995640 tcagaatgtttgcccagaattttaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 16995541  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  16995540 ctctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 16995478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 17488997 - 17489159
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | ||||||||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  17488997 tcagaatgtttgcccagattttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 17489096  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  17489097 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 17489159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 338 - 486
Target Start/End: Complemental strand, 38957508 - 38957360
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| |||||  ||||| |||||||||||||||||||||||||| | ||||||  |||| ||| | ||||||||  ||||||||||||||     
T  38957508 cagaatttcaagttaaagcttgtgggacccatgacacatggcataacaccatttgacaccctacaacgactatatgagcccaaagactctataaatagag 38957409  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  38957408 atcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 38957360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 2998369 - 2998207
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  2998369 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 2998270  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  2998269 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 2998207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 4458502 - 4458664
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  4458502 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 4458601  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  4458602 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 4458664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 4468127 - 4468289
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  4468127 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 4468226  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  4468227 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 4468289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 5336807 - 5336645
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  5336807 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 5336708  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  5336707 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 5336645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 5346660 - 5346498
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  5346660 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 5346561  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  5346560 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 5346498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 9502432 - 9502270
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  9502432 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 9502333  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  9502332 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 9502270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 9513798 - 9513636
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  9513798 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 9513699  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  9513698 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 9513636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 18651525 - 18651687
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  18651525 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 18651624  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  18651625 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 18651687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 18663643 - 18663805
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  18663643 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 18663742  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  18663743 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 18663805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 24696257 - 24696095
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  || ||||| | ||||||||  |    
T  24696257 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaatggctatatgagcccaaaga 24696158  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  24696157 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 24696095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 3605816 - 3605703
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaa 312  Q
    |||| |||||||||||| |||||||||||| ||| |||| | ||||||||| |  |||    ||| ||||| |||||||||||||||||||||| |||||    
T  3605816 cacgtattggataaacctagaaactcatcagacattcatcattgatgaacctagatgaagaacatcatgaatatcaacattctgatgaagaacacaacaa 3605717  T
Q  313 cattctgatgttca 326  Q
    ||||||||||||||    
T  3605716 cattctgatgttca 3605703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 355
Target Start/End: Complemental strand, 24238845 - 24238739
Alignment:
Q  248 tcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgttcagaatgttcacgcagattttca 347  Q
    ||||| ||||||||||||  ||| |||| ||||||||||||||||| ||||||||||||  |||||||||||||  |||||||||| || || | |||||    
T  24238845 tcatatatgatgaacccaggtgaatgtc-tgatgaacatcaacattttgatgaagaacacgacaacattctgatagtcagaatgtttacccaaaatttca 24238747  T
Q  348 agtaaaag 355  Q
    ||||||||    
T  24238746 agtaaaag 24238739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 486
Target Start/End: Complemental strand, 38930156 - 38930013
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    |||||||| |||||  ||||| |||| || |||||||||||||||||||| ||||||  |||||||| | | ||||||  ||||||||||||||  | ||    
T  38930156 tttcaagttaaagcttgtgggacccaggaaacatggcataacaccattggacaccctacaacggctatatgggcccaaagactctataaatagagatcaa 38930057  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     |  | ||||  ||||||||||||||||| ||||||||||||||    
T  38930056 ggcattaacaaaacttgcaccattgcaaagcatacaagaaaaca 38930013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 24695957 - 24695896
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  24695957 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 24695896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 37862489 - 37862428
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37862489 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 37862428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 45015017 - 45015179
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  | ||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  45015017 tcagaatgtttgcccagaatttcaagttaaagcttgcgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 45015116  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  45015117 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 45015179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 45015317 - 45015378
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  45015317 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 45015378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 45025116 - 45025278
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| |  |||||||  |    
T  45025116 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatataagcccaaaga 45025215  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  45025216 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 45025278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 45191441 - 45191502
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  45191441 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 45191502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 618 - 687
Target Start/End: Complemental strand, 41026288 - 41026220
Alignment:
Q  618 tttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||| ||| |||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  41026288 tttcaaacatccaaacttcatacaaattgtaatcaag-tctcatctagctttaggggtactaaagtgtta 41026220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 385 - 670
Target Start/End: Original strand, 23730153 - 23730440
Alignment:
Q  385 accattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa 484  Q
    |||| ||||||| ||| |||||||||||  || |||||||||||||||||||  | ||   |||| ||| ||   |||  ||||||| ||||||||||||    
T  23730153 accagtggtcactctccaacggctacaaaggctcaagaactctataaatagagatcaagacctcagcataacacacacatttgcaaagcatacaagaaaa 23730252  T
Q  485 catcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaa 583  Q
    || | ||| |||||||||| ||||||||     ||||||||||||  ||||| | |   || |    |||||||||| ||| | |||||||| || |||     
T  23730253 caacataagagtgtttgaatctttagcaaaaacattgatcatcacaaagattccaagaagtcttcaaaagtgtaaattaatatttctcttatctttttat 23730352  T
Q  584 agataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagcttta 670  Q
    |||||| | ||||||| |||||||||||||||| || |  |||||||||  |||||||||||||||| |||| ||| |||||||||||    
T  23730353 agataaatatctccctccattcttctcttgtctgatctacatcattcaatttccatacaaattgtaaacaaagtcttatctagcttta 23730440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 687
Target Start/End: Complemental strand, 32936293 - 32936100
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga-gatttccaactgtat-ctttaagtgtaaatcaattctctct--tatattgttaaagataatttc 593  Q
    ||||||||||||||||||||||||||||||||||| ||||    | | | | |||  |||||||||||||||| |||  ||| |  ||||||||||        
T  32936293 tttgaagctttagcatctgaattgatcatcactgaagattctttaatatcttcttgtagtgtaaatcaattctttctgctatctctttaaagataacact 32936194  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagc-tttaggggtactaaagtgtta 687  Q
    ||| | | |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||| | ||||| ||| |||||||||||    
T  32936193 tccttcctttcttctcttgtctgatttcattcattcaagctccatacaaattgtaa-caaagtctcatctaacttttagaggtcctaaagtgtta 32936100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 22687564 - 22687451
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataaca 311  Q
    |||| ||||||| ||||||||||||||||| ||| |||| |||||||||||||  |||    ||| ||||| ||| |||||||||||||||||||  |||    
T  22687564 cacgtattggatgaacccagaaactcatcaaacattcatcaatgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaaca-caca 22687466  T
Q  312 acattctgatgttca 326  Q
    |||||||||||||||    
T  22687465 acattctgatgttca 22687451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 29423957 - 29424018
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  29423957 cattcaacctccatacaaattgtaa-caaagtctcatctaactttaggggtactaaagtgtta 29424018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 498 - 687
Target Start/End: Complemental strand, 3605325 - 3605136
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactgagatttc--caactgtatctttaagtgtaaatcaattc--tctcttatattgttaaagataatttc 593  Q
    |||||||||||||||||||||||||||||||||||   |||   ||     ||||  |||||||||||||||  ||| |||| |  ||||||||||        
T  3605325 tttgaagctttagcatctgaattgatcatcactgaatattctttaatatcttcttgtagtgtaaatcaattctttctgttatctctttaaagataacact 3605226  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||| | | |||||||||||||| ||||||||||||||| || || |||  ||||    ||| ||||||||||||||||||||||||||||||||    
T  3605225 tccttcctttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgt----aaagtctcatctagctttaggggtactaaagtgtta 3605136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 12571201 - 12571262
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| |  |||||||||||||||  ||||||||||||||||||||||||||||||||    
T  12571201 cattcaaacttctcacaaattgtaatcaag-tctcatctagctttaggggtactaaagtgtta 12571262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 23722222 - 23722320
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaataga 436  Q
    |||| |||||||| ||||   |||||||||| ||||| |||||||  |||| ||||||| ||| |||||||||||  || |||||||||||||||||||    
T  23722222 cagaatttcaagtgaaagttggtggggcccaggacacgtggcatacgaccagtggtcactctccaacggctacaaaggctcaagaactctataaataga 23722320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 633 - 687
Target Start/End: Complemental strand, 38929875 - 38929822
Alignment:
Q  633 ctccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  38929875 ctccatacaaattgtaa-caaagtctcatctacctttaggggtactaaagtgtta 38929822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 16901792 - 16901711
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||| ||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  16901792 ttcttctcttgtctgatttccatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 16901711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 16995183 - 16995102
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||| ||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  16995183 ttcttctcttgtctgatttccatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 16995102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 4459009 - 4459043
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  4459009 aaatctcatctagctttaggggtactaaagtgtta 4459043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 4468634 - 4468668
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  4468634 aaatctcatctagctttaggggtactaaagtgtta 4468668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 5336210 - 5336176
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  5336210 aaatctcatctagctttaggggtactaaagtgtta 5336176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 5336301 - 5336267
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  5336301 aaatctcatctagctttaggggtactaaagtgtta 5336267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 5346062 - 5346028
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  5346062 aaatctcatctagctttaggggtactaaagtgtta 5346028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 5346153 - 5346119
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  5346153 aaatctcatctagctttaggggtactaaagtgtta 5346119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 16901569 - 16901535
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  16901569 aaatctcatctagctttaggggtactaaagtgtta 16901535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 532
Target Start/End: Complemental strand, 16901900 - 16901866
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga 532  Q
    |||||||||||||||||||||||||||||||||||    
T  16901900 tttgaagctttagcatctgaattgatcatcactga 16901866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 16994960 - 16994926
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  16994960 aaatctcatctagctttaggggtactaaagtgtta 16994926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 532
Target Start/End: Complemental strand, 16995291 - 16995257
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga 532  Q
    |||||||||||||||||||||||||||||||||||    
T  16995291 tttgaagctttagcatctgaattgatcatcactga 16995257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 27159670 - 27159572
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaataga 436  Q
    |||| |||||||| ||||   ||||| ||||  |||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||    
T  27159670 cagaatttcaagttaaagttggtgggtcccagaacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaataga 27159572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 27170018 - 27169920
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaataga 436  Q
    |||| |||||||| ||||   ||||| ||||  |||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||    
T  27170018 cagaatttcaagttaaagttggtgggtcccagaacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaataga 27169920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 447 - 532
Target Start/End: Original strand, 28450743 - 28450829
Alignment:
Q  447 tcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctg-aattgatcatcactga 532  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| |   ||||||||||| | |||  || ||||||||||||||||    
T  28450743 tcaaaattacttgcaccattgcaaagcatacaagaaaacaacttgattttgtttgaagctcttgcaattgaaattgatcatcactga 28450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 33432554 - 33432520
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  33432554 aaatctcatctagctttaggggtactaaagtgtta 33432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 33432645 - 33432611
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  33432645 aaatctcatctagctttaggggtactaaagtgtta 33432611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 637 - 687
Target Start/End: Complemental strand, 38957213 - 38957164
Alignment:
Q  637 atacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  38957213 atacaaattgtaa-caaagtctcatctacctttaggggtactaaagtgtta 38957164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 532
Target Start/End: Complemental strand, 44638333 - 44638299
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga 532  Q
    |||||||||||||||||||||||||||||||||||    
T  44638333 tttgaagctttagcatctgaattgatcatcactga 44638299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 12570757 - 12570866
Alignment:
Q  218 attggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa-cattctgatgaagaacataacaacatt 316  Q
    |||||||| ||| |||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| | ||| ||||||||||||||||| | |||||||    
T  12570757 attggatagacctagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaataccaaacattctgatgaagaacacagcaacatt 12570856  T
Q  317 ctgatgttca 326  Q
    ||||||||||    
T  12570857 ctgatgttca 12570866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 326
Target Start/End: Original strand, 45191018 - 45191118
Alignment:
Q  227 acccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataacaacattctgatgttc 325  Q
    |||||||||||||||| ||| ||||   |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| | ||||||||||||||||    
T  45191018 acccagaaactcatcagacattcatccttgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacagcaacattctgatgttc 45191117  T
Q  326 a 326  Q
    |    
T  45191118 a 45191118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 3605079 - 3605048
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  3605079 tctcatctagctttaggggtactaaagtgtta 3605048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 16901654 - 16901623
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  16901654 tctcatctagctttaggggtactaaagtgtta 16901623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 16995045 - 16995014
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  16995045 tctcatctagctttaggggtactaaagtgtta 16995014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 22679183 - 22679152
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  22679183 tctcatctagctttaggggtactaaagtgtta 22679152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 687
Target Start/End: Original strand, 28450926 - 28450992
Alignment:
Q  620 tcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| |||||||||| |  ||||||||||| |||| ||||||||||||||| |||||| |||||||||    
T  28450926 tcaaacattcaaacttctcacaaattgtaaacaaa-tctcatctagctttaagggtaccaaagtgtta 28450992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 574508 - 574546
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  574508 aacattctgatgaagaacacatcaacattctgatgttca 574546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 3604994 - 3604960
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||| |||||    
T  3604994 aaatctcatctagctttaggggtactaaaatgtta 3604960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 22679098 - 22679064
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||| ||||||||||||||||    
T  22679098 aaatctcatctagctttaagggtactaaagtgtta 22679064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 22908542 - 22908444
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaataga 436  Q
    |||| |||||||| ||||   ||||| |||| || || |||||||| |||| ||||||| ||| || ||||||||  || |||||||||||||||||||    
T  22908542 cagaatttcaagtgaaaggttgtgggtcccaggatacgtggcataagaccagtggtcactctccaatggctacaaaggctcaagaactctataaataga 22908444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 24234258 - 24234196
Alignment:
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcacca 464  Q
    |||||||| | |||| ||| |||||||||||||||  | ||||||||| ||||||||||||||    
T  24234258 aacggctatatgagctcaaaaactctataaatagagatcaaaggctcaccattacttgcacca 24234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 392
Target Start/End: Original strand, 29423663 - 29423717
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattgg 392  Q
    |||| ||||||||||||||  ||||| |||| |||||||| ||||||||||||||    
T  29423663 cagaatttcaagtaaaagcttgtgggacccaggacacatgacataacaccattgg 29423717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 308 - 651
Target Start/End: Original strand, 11477191 - 11477532
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||| |||||||||||| || |||| ||||||||||||| |||||||||||| ||||||||||| || || | |||| | |||| ||||||    
T  11477191 aacaacattctgaagttcagaatgtttacccagaatttcaagtaaaagtcagtggggcccaggacacatggcagaagactaatggttatcctccaacggc 11477290  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctt 507  Q
     |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| |||| | |||||||||| |||||||||||||||||    
T  11477291 aacaagagcccaagaactctataaatagaagtgaaagactcagcattacttgcaccatttcaaagcatataggaaaacatctgaaaagtgtttgaagctt 11477390  T
Q  508 tagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctcccttcattcttc 607  Q
    || ||| |||||||||||||||||||||||  || ||| |||| ||||||||||||||||||| || | | ||||| |   |||||||||| ||||||||    
T  11477391 taacatttgaattgatcatcactgagattttaaattgtctcttaaagtgtaaatcaattctctattttctagttaagg--tatttctccctccattcttc 11477488  T
Q  608 tcttgtctcatttcaatcattcaaactccatacaaattgtaatc 651  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  11477489 tcttgtctgatttcaatcattcaaactccatacaaattgtaatc 11477532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 312 - 687
Target Start/End: Complemental strand, 13792806 - 13792431
Alignment:
Q  312 acattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctaca 411  Q
    ||||||| |||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| || |||||| ||||||||| ||||||||||    
T  13792806 acattcttatgttcagaatgtttacccagattttcaagtaaaagctagtggggcccatgacacatggcacaagaccattagtcaccctccaacggctaca 13792707  T
Q  412 agagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaaga-aaacatc-ttaaaagtgtt-tgaagcttt 508  Q
    ||| |||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| || | |||| ||||| |   || | |||| |||||||||    
T  13792706 agatcccaagaactctataaatagaagtgagaggctcatcattacttgcactattgcaaagca-aaaagagaaacaacaagaacattgttgtgaagcttt 13792608  T
Q  509 agcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagat-aatttctcccttcattc--- 604  Q
    ||| |   |||||||||||||||||||||| || ||  |||  |||||||||||||||||||||||| ||||||||||| || ||| |||| |||||       
T  13792607 agcgttaaaattgatcatcactgagatttcaaattg--tctcgaagtgtaaatcaattctctcttatcttgttaaagataaacttccccctccattctta 13792510  T
Q  605 ttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||| |||| |||||||||| ||||| ||| |||||    ||| ||||||||| ||||||||||||||||||||||    
T  13792509 ttctcttgtctgattttaatcattcaatctccaaacatattgt----aaagtctcatctaactttaggggtactaaagtgtta 13792431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 300 - 687
Target Start/End: Complemental strand, 6405616 - 6405224
Alignment:
Q  300 aagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccct 399  Q
    ||||||| ||||| ||||||||| |||||| |||||| |||||||| |||||||| | ||||||||||| ||||||||| | || ||||||||||||| |    
T  6405616 aagaacacaacaatattctgatgatcagaaggttcacccagattttgaagtaaaatctagtggggcccaggacacatggaacaagaccattggtcacctt 6405517  T
Q  400 ctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaag-aaaacatcttaaaagtgt 498  Q
    | |||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||||| ||| || ||||| |||||| |  ||||||||    
T  6405516 ccaacggctacaagagcccaagaactctataagtataagtgaaaggcacatcattacttgcaccattgtaaagca-acaagaaaaacaacagaaaagtgt 6405418  T
Q  499 t-tgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagat-aatttctcc 596  Q
    | |||| ||||||||    |||||||||| ||| ||||||| |   || | || ||||||||||||||| |||||||| || |||||||| || ||||||    
T  6405417 tgtgaaactttagcaaaaaaattgatcataactaagatttcaagaagtcttttaaagtgtaaatcaattatctcttatctttttaaagataaacttctcc 6405318  T
Q  597 cttca---ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    || ||   ||||||| |||||| |||| |||||||||||||| | |||| |||||| |||| ||||||||||||||||||||| ||||||||||    
T  6405317 ctccattcttcttcttttgtctgattttaatcattcaaactctaaacaagttgtaaacaaagtctcatctagctttaggggtattaaagtgtta 6405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 298 - 687
Target Start/End: Complemental strand, 14600449 - 14600055
Alignment:
Q  298 tgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcacc 397  Q
    ||||||||| |||||||||||| || |||||||| | || |||| |||| ||||||||   |||||||||| ||||| ||||||||||||||||||||||    
T  14600449 tgaagaacacaacaacattctggtggtcagaatgcttacccagaatttcgagtaaaagtttgtggggcccaagacacgtggcataacaccattggtcacc 14600350  T
Q  398 ctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtg 497  Q
     |  |||||||| | |||||||| ||||||||||||| |  | ||||||||||||||||||||||||||||||| ||||||||||||||| | ||| |||    
T  14600349 ttacaacggctatatgagcccaaaaactctataaataaagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaacatttgaaatgtg 14600250  T
Q  498 tttgaagctttagc-atctgaattgatcatcactgagatt-tccaactgtatctttaagtgtaaatcaattctctcttatat---tgttaaagataattt 592  Q
    ||||||||  | || || |||||||||||||| ||||||| |  |  ||| ||||  |||||||||||||||| | ||  ||   | |||||||||||||    
T  14600249 tttgaagcccttgcaatttgaattgatcatcaatgagattctttatatgt-tcttgtagtgtaaatcaattctttatttcatctcttttaaagataattt 14600151  T
Q  593 ctcccttcattcttctcttgtctcatt-tcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
     ||| | |||||| || |||| |  || |||| ||||||||||||||||||||||||||  || || ||||||||||||| |||||||||||||||    
T  14600150 ttccttccattctccttttgtttgtttctcaaacattcaaactccatacaaattgtaatttaagtcccatctagctttagaggtactaaagtgtta 14600055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 308 - 486
Target Start/End: Original strand, 16629827 - 16630005
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  16629827 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 16629926  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  16629927 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 16630005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 285 - 508
Target Start/End: Original strand, 16397162 - 16397385
Alignment:
Q  285 atcaacattctgatgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataac 384  Q
    |||||||||||||||||||||| ||||||||||||||| | | ||||||||| || | |||||||||||||   |||||||| | |||||||||||||||    
T  16397162 atcaacattctgatgaagaacacaacaacattctgatggtaataatgttcacccatagtttcaagtaaaagtatgtggggcctaggacacatggcataac 16397261  T
Q  385 accattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa 484  Q
    |||||||| ||||||  |||||||| | ||||||||  ||||||||||||||  |  ||||||||||||||||||||| |||||||| |||||||  |||    
T  16397262 accattggacaccctacaacggctatatgagcccaaagactctataaatagagatctaaggctcaacattacttgcactattgcaaagcatacaaataaa 16397361  T
Q  485 catcttaaaagtgtttgaagcttt 508  Q
    || ||||| | |||||||||||||    
T  16397362 caacttaagattgtttgaagcttt 16397385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 308 - 610
Target Start/End: Original strand, 41526407 - 41526710
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    |||||||||||||||||| ||||||| ||  | | ||||||||||||| |||||||||| | ||||||||||| | ||||| |||| || ||| ||||||    
T  41526407 aacaacattctgatgttcggaatgtttacctaaaatttcaagtaaaagtcagtggggcc-aggacacatggcaaatcaccaatggttacactccaacggc 41526505  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaag-aaaacatc-ttaaaagtgtt-tgaag 504  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| |||||| |   || | |||| |||||    
T  41526506 tataagagcccaagaactctataaatagaagtgaaaggctcagcattacttgcaccattgcaaagca-acaagaaaaacaacaagaacattgttgtgaag 41526604  T
Q  505 ctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctcccttcattc 604  Q
    ||||||||    |||||||||||||  ||||| | |   |||| || |||||||||| |||||| |||||| ||||||||||||| |||||| | |||||    
T  41526605 ctttagcaaaaaaattgatcatcacaaagattccaagaagtattttcaagtgtaaattaattctttcttatcttgttaaagataagttctccttccattc 41526704  T
Q  605 ttctct 610  Q
    ||||||    
T  41526705 ttctct 41526710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 300 - 512
Target Start/End: Original strand, 19918482 - 19918695
Alignment:
Q  300 aagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccct 399  Q
    ||||||| ||||| ||| ||||||||| ||||||||| || |||||||||||||||  |||||| |||| || |||||||| || ||||||| |||| ||    
T  19918482 aagaacacaacaatattttgatgttcataatgttcacccatattttcaagtaaaagttagtgggacccaggaaacatggcacaagaccattgctcactct 19918581  T
Q  400 ctaacggctacaagagcccaaga-actctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgt 498  Q
    | ||| ||||||||||  ||||| || ||||||||||||||| |||||||| ||||||||||||| || |||| |||||||||||||| ||||| |||||    
T  19918582 ccaacagctacaagaggtcaagacaccctataaatagaagtggaaggctcagcattacttgcacctttacaaagcatacaagaaaacaacttaagagtgt 19918681  T
Q  499 ttgaagctttagca 512  Q
    ||||||||||||||    
T  19918682 ttgaagctttagca 19918695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 302 - 532
Target Start/End: Complemental strand, 16210942 - 16210712
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||  ||||| ||||| ||||||||||| ||||||      
T  16210942 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggcccgggacacgtggcaaaacaccattggacaccctac 16210843  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttg 501  Q
    |||||||| | |||| |||  ||||||||||||||  | |  | || | ||  ||||||||||||||||| |||||||||||||| ||| ||| ||||||    
T  16210842 aacggctatatgagctcaaagactctataaatagagatcatggccttagcaaaacttgcaccattgcaaagcatacaagaaaacaacttgaaattgtttg 16210743  T
Q  502 aagctttagcatctgaattgatcatcactga 532  Q
    ||||| | |||  ||||||||||||||||||    
T  16210742 aagctcttgcaattgaattgatcatcactga 16210712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 338 - 687
Target Start/End: Complemental strand, 17421050 - 17420699
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| || ||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  17421050 cagaatttcaagttaaagttggtgggtcccaggacacgtgacataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 17420951  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||||||| || | |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  17420950 atcaagacctcaacataacatacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 17420851  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    | |   || |    |||| ||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  |||||||||||||    
T  17420850 caagaagtcttcaaaagtataaatcaatatctctcttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaaactc 17420751  T
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  17420750 catacaaattgtaaagaaagtctcatctagctttaggggtactaaagtgtta 17420699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 324 - 503
Target Start/End: Complemental strand, 9835821 - 9835642
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    |||||||||| || || | |||||||||||||   |||||||||| |||||||| |||||||||||||| ||||||  || |||||   |||||||| ||    
T  9835821 tcagaatgtttacccataatttcaagtaaaagtttgtggggcccaggacacatgacataacaccattggacaccctacaatggctatgtgagcccaaaaa 9835722  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaa 503  Q
    |||||||||||||  | ||| ||||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||||    
T  9835721 ctctataaatagagatcaaatgctcaacattacttgcaccattgcaaagcatacaagaaaacatttgaaacgtgtttgaa 9835642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 338 - 687
Target Start/End: Complemental strand, 521946 - 521593
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||| ||  || |||||||||||||||||||     
T  521946 cagaatttcaagtgaaagttggtgggacccaggacacgtggcataagaccagtggtcactctccaacggctataaaggctcaagaactctataaatagag 521847  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  521846 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 521747  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaac-t 634  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  ||||||||||| |    
T  521746 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaaacct 521647  T
Q  635 ccatacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  521646 ccatacaaattgtaaagaaaagtctcatctagctttaggggtactaaagtgtta 521593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 359 - 498
Target Start/End: Complemental strand, 15622489 - 15622349
Alignment:
Q  359 gtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa-ctctataaatagaagtgaaaggctcaacattact 457  Q
    ||||| |||| ||||||||||| || |||||||||||| ||| || | ||| |||||| |||||| |||||| |||||||||| ||||||||||||||||    
T  15622489 gtgggtcccaggacacatggcacaagaccattggtcactctccaatgactaaaagagctcaagaaactctattaatagaagtggaaggctcaacattact 15622390  T
Q  458 tgcaccattgcaaaacatacaagaaaacatcttaaaagtgt 498  Q
    ||||||||||||||||||||||| ||||| | |||||||||    
T  15622389 tgcaccattgcaaaacatacaagtaaacaacataaaagtgt 15622349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 302 - 479
Target Start/End: Original strand, 2829811 - 2829988
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||  ||| |      
T  2829811 gaacacaacaacattctaatggtcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattgggtaccttac 2829910  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaa 479  Q
    |||||||| | ||||||||  ||||||||||||||  | || | || | ||  ||||||||||||||||| |||||||    
T  2829911 aacggctatatgagcccaaagactctataaatagagatcaatgccttagcaaaacttgcaccattgcaaagcatacaa 2829988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 344 - 687
Target Start/End: Original strand, 8841515 - 8841848
Alignment:
Q  344 ttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaaga-actctataaatagaagtgaa 442  Q
    ||||||||||||   ||||| |||| ||||| ||||| || || ||||||||| ||  || |||||||||||  ||||| |||||||||||||||| | |    
T  8841515 ttcaagtaaaagttggtgggtcccaggacacgtggcacaagactattggtcacacttcaatggctacaagagttcaagacactctataaatagaagagga 8841614  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaac 542  Q
    ||| |||||||||||||||| | ||||||||||||||||||||| |  ||||||||||||| |            ||||||| ||||  ||| ||||||     
T  8841615 aggttcaacattacttgcactagtgcaaaacatacaagaaaacaccacaaaagtgtttgaaac------------attgatc-tcacaaaga-ttccaa- 8841699  T
Q  543 tgtatcttt--aagtgtaaatcaat-tctctcttatattgttaaagat-aatttctcccttcattcttctcttgtctcatttcaatcattcaaac-tcca 637  Q
       ||||||  |||||| ||||||| |||||||||| || |||||||| || |||||||| |||||| ||||||||| ||||||||||||||||| | ||    
T  8841700 gaaatctttaaaagtgtgaatcaatatctctcttatctttttaaagataaacttctccctccattctactcttgtctgatttcaatcattcaaactttca 8841799  T
Q  638 tacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
     |||||||||||  ||| ||||||||||| ||||||||||||||||||||    
T  8841800 aacaaattgtaaagaaagtctcatctagc-ttaggggtactaaagtgtta 8841848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 359 - 687
Target Start/End: Original strand, 26458753 - 26459084
Alignment:
Q  359 gtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattactt 458  Q
    ||||| |||| ||||| |||||||| |||| ||||| | ||| |||||||||||  || |||||||||||||||||||  | ||   |||||||| ||      
T  26458753 gtgggtcccaggacacgtggcataagaccagtggtctctctccaacggctacaaaggctcaagaactctataaatagatctcaagacctcaacataacac 26458852  T
Q  459 gcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgta 558  Q
     |||  ||||||| ||||||||||||||   ||| ||||||||||||||||| |     ||||||||||||  ||||| | |   || |    |||||||    
T  26458853 acacatttgcaaagcatacaagaaaacaatataagagtgtttgaagctttagaaaaaatattgatcatcacaaagattccaagaagtcttcaaaagtgta 26458952  T
Q  559 aatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaat 656  Q
    ||||||| |||||||||| || | ||||| || | ||  | | |||||||||||||||| || |  ||||||||||||||||||||||||||| |||| |    
T  26458953 aatcaatatctctcttatcttttcaaagaaaaatctcaacgtccattcttctcttgtctgatctatatcattcaaactccatacaaattgtaaacaaagt 26459052  T
Q  657 ctcatctagcttta-ggggtactaaagtgtta 687  Q
    |||||||||||||| |||||||||||||||||    
T  26459053 ctcatctagctttagggggtactaaagtgtta 26459084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 309 - 479
Target Start/End: Complemental strand, 53946077 - 53945907
Alignment:
Q  309 acaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggct 408  Q
    |||||||| ||||| ||||||||||||| |||||||||||||||||||  ||||||  |||||||| ||||||||||||||||| ||||    |||||||    
T  53946077 acaacattttgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggtgcatgacacgtggcataacaccattgggcacctcacaacggct 53945978  T
Q  409 acaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaa 479  Q
    | | ||||||||  ||||||||||||||  | ||   || ||||  ||||||||||||||||| |||||||    
T  53945977 atatgagcccaaagactctataaatagagatcaagaccttaacaaaacttgcaccattgcaaagcatacaa 53945907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 302 - 434
Target Start/End: Complemental strand, 7846522 - 7846389
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagt-aaaagccagtggggcccatgacacatggcataacaccattggtcaccctc 400  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||  ||||| |||| ||||||||||||||||||||||| ||| |      
T  7846522 gaacacaacaacattctgaagttcagaatgttcacccagattttcaagtaaaaagcttgtgggacccaggacacatggcataacaccattggacactcca 7846423  T
Q  401 taacggctacaagagcccaagaactctataaata 434  Q
     |||||||| | ||||||||  ||||||||||||    
T  7846422 aaacggctatatgagcccaaagactctataaata 7846389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 552 - 687
Target Start/End: Complemental strand, 15622354 - 15622214
Alignment:
Q  552 aagtgtaaatcaattctctcttatattgttaaagat-aatttctccct---tcattcttctcttgtctcatttcaatcattcaaac-tccatacaaattg 646  Q
    ||||||||| |||||||||||||| || |||||||| || ||| ||||   |  |||||||||||||| ||||||||||||||||| |||| |||| |||    
T  15622354 aagtgtaaaacaattctctcttatctttttaaagataaacttccccctatattcttcttctcttgtctgatttcaatcattcaaacttccaaacaatttg 15622255  T
Q  647 taatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||  ||| ||||||||||||||||||||||||||||||||    
T  15622254 taaagaaagtctcatctagctttaggggtactaaagtgtta 15622214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 513 - 631
Target Start/End: Original strand, 41526708 - 41526825
Alignment:
Q  513 tctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctcccttcattcttctcttg 612  Q
    ||||||||||||||||||||||| || || ||| ||||  |||||||||||||||| |||||| ||||||||||||| |||| | | | |||||||||||    
T  41526708 tctgaattgatcatcactgagatctcaaaatgtctcttgtagtgtaaatcaattctttcttatcttgttaaagataagttct-cttcctttcttctcttg 41526806  T
Q  613 tctcatttcaatcattcaa 631  Q
    ||| |||||||||||||||    
T  41526807 tctgatttcaatcattcaa 41526825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 44888908 - 44889021
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaa 312  Q
    |||| ||||||||||||||||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| |||||||||||||||||||||| | |||    
T  44888908 cacgtattggataaacccagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaacattctgatgaagaacacagcaa 44889007  T
Q  313 cattctgatgttca 326  Q
    ||||||||||||||    
T  44889008 cattctgatgttca 44889021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 5292850 - 5292688
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  5292850 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 5292751  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  5292750 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 5292688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 5302509 - 5302347
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  5302509 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 5302410  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  5302409 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 5302347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 6692525 - 6692687
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  6692525 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 6692624  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  6692625 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 6692687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 6702931 - 6703093
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  6702931 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 6703030  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  6703031 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 6703093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 17827927 - 17827765
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  17827927 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 17827828  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  17827827 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 17827765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 17837318 - 17837156
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  17837318 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 17837219  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  17837218 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 17837156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 17984626 - 17984464
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  17984626 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 17984527  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  17984526 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 17984464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 18105176 - 18105014
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  18105176 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 18105077  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  18105076 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 18105014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 27680513 - 27680351
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  27680513 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 27680414  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  27680413 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 27680351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 27690168 - 27690006
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  27690168 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 27690069  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  27690068 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 27690006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 40922150 - 40922312
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  40922150 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 40922249  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  40922250 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 40922312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 302 - 392
Target Start/End: Original strand, 44889028 - 44889118
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattgg 392  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||  ||||| | || ||||| |||||||||| ||||||    
T  44889028 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtgggactcaggacacgtggcataacatcattgg 44889118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 16249753 - 16249865
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  16249753 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 16249852  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  16249853 ctctataaataga 16249865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 21856002 - 21856114
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  21856002 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 21856101  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  21856102 ctctataaataga 21856114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 21911865 - 21911977
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  21911865 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 21911964  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  21911965 ctctataaataga 21911977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 3487389 - 3487227
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||||||||  ||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  3487389 tcagaatgtttgcccagaatttcaagtttaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 3487290  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  3487289 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 3487227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 3496712 - 3496550
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||||||||  ||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  3496712 tcagaatgtttgcccagaatttcaagtttaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 3496613  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  3496612 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 3496550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 14600530 - 14600453
Alignment:
Q  248 tcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||| ||||| ||||||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  14600530 tcatacatgataaacccaaatgaatgtc-tgatgaacatcaacattctgatgaagaacacaacaacattctaatgttca 14600453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 16630137 - 16630198
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  16630137 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 16630198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 16211050 - 16210949
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    |||||||||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| |||||||||||||||||||||| | |||||||||||||||    
T  16211050 aaacccagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaacattctgatgaagaacacatcaacattctgatgtt 16210951  T
Q  325 ca 326  Q
    ||    
T  16210950 ca 16210949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 338 - 687
Target Start/End: Original strand, 30651902 - 30652249
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| ||||| || |||||||||||| ||| ||||| |||||  || |||||||||||||||||||     
T  30651902 cagaatttcaagtgaaagttggtgggtcccaggacacgtggcacaagaccattggtcactctccaacggttacaaaggctcaagaactctataaatagag 30652001  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaag-aaaacatc-ttaaaagtgtt-tgaagctttagcatctgaattgatcatcactgaga 534  Q
     | ||   |||||||| || |||||||||||||| || ||||| |||||| |   || | |||| |||||||||||||    |||||||||||||  |||    
T  30652002 atcaagacctcaacataacatgcaccattgcaaagca-acaagaaaaacagcaagaacattgttgtgaagctttagca-aaaaattgatcatcacaaaga 30652099  T
Q  535 tttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagat-aatttctcccttcattcttctcttgtctcatt-tcaatcattcaaa 632  Q
    |||| |   || | |||||||||||||||||||||| |||| || |||||||| || |||||||| |||||||||  ||| |  || |||| | ||||||    
T  30652100 tttcaataagtctttttaagtgtaaatcaattctcttttatctttttaaagataaacttctccctccattcttcttctgtttgtttctcaaac-ttcaaa 30652198  T
Q  633 ctccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||| |||  ||||    ||| | ||||||||||||||||||||||||||||||    
T  30652199 ctccaaacatcttgt----aaagtttcatctagctttaggggtactaaagtgtta 30652249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 338 - 486
Target Start/End: Original strand, 15670410 - 15670558
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| ||||||||||||||  ||||| |||| ||||||||| |||||| |||||| ||||||  |||||||| | ||||||||  ||||||||||||||     
T  15670410 cagaatttcaagtaaaagcttgtgggacccaagacacatggtataacatcattggacaccctacaacggctatatgagcccaaagactctataaatagag 15670509  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | |  | || | ||  ||||||| ||||||||| ||||||||||||||    
T  15670510 atcatggccttagcaaaacttgcaacattgcaaagcatacaagaaaaca 15670558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 536
Target Start/End: Original strand, 17161994 - 17162066
Alignment:
Q  464 attgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatt 536  Q
    |||||||| ||||||||||||||    |||| |||||||||||||||||| ||||||||||||||||||||||    
T  17161994 attgcaaagcatacaagaaaacaaacaaaaattgtttgaagctttagcatttgaattgatcatcactgagatt 17162066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 21846410 - 21846522
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  21846410 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 21846509  T
Q  424 ctctataaataga 436  Q
    ||| |||||||||    
T  21846510 ctccataaataga 21846522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 21902273 - 21902385
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  21902273 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 21902372  T
Q  424 ctctataaataga 436  Q
    ||| |||||||||    
T  21902373 ctccataaataga 21902385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 10422387 - 10422448
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  10422387 cattcaacctccatacaaattgtaa-caaagtctcatctagctctaggggtactaaagtgtta 10422448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 15670684 - 15670745
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  15670684 cattcaacctccatacaaattgtaa-caaagtctcatatagctttaggggtactaaagtgtta 15670745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 687
Target Start/End: Original strand, 2830218 - 2830299
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  2830218 ttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 2830299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 350 - 486
Target Start/End: Original strand, 10422105 - 10422241
Alignment:
Q  350 taaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctca 449  Q
    |||||||  ||||| |||| ||||||||||||||||||||||| ||||||  | |||||| | ||| ||||  ||||||||||||||  | |  | || |    
T  10422105 taaaagcttgtgggacccaggacacatggcataacaccattggacaccctacagcggctatatgagtccaaagactctataaatagagatcatggcctta 10422204  T
Q  450 acattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     ||  ||||||||||||||||| ||||||||||||||    
T  10422205 gcaaaacttgcaccattgcaaagcatacaagaaaaca 10422241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 16210538 - 16210457
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  16210538 ttcttctcttgtctgatttcaatcattcaatcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 16210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 16253666 - 16253778
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||| |||||| |||||||| ||||||  |||||||| | ||||||||  |    
T  16253666 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatcgcataagaccattggacaccctacaacggctatatgagcccaaaga 16253765  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  16253766 ctctataaataga 16253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 464 - 536
Target Start/End: Original strand, 17144085 - 17144156
Alignment:
Q  464 attgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatt 536  Q
    |||||||| |||||||||||||| |  || | |||||||||||||||||| ||||||||||||||||||||||    
T  17144085 attgcaaagcatacaagaaaacaaca-aagattgtttgaagctttagcatttgaattgatcatcactgagatt 17144156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 7846198 - 7846136
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  7846198 cattcaacctccat-caaattgtaaccaaaagtctcatctagctttaggggtactaaagtgtta 7846136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 687
Target Start/End: Original strand, 44889538 - 44889596
Alignment:
Q  628 tcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  44889538 tcaacctccatacaaattgtaa-caaagtctcatctaactttaggggtactaaagtgtta 44889596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 532
Target Start/End: Complemental strand, 13402800 - 13402611
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    ||||||||||||||  ||||| |||| ||||||| ||||||| |||||||  |||||  || ||||| | ||||||||  ||||||||||||||  | ||    
T  13402800 tttcaagtaaaagcttgtgggacccaggacacatagcataacgccattggataccctacaatggctatatgagcccaaatactctataaatagagatcaa 13402701  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagc-atctgaattgatcatcactga 532  Q
     | |||  ||  |||||||| |||||||| |||||||| ||||| |  || | ||||||||||| | || || ||||||||||||||||||    
T  13402700 ggcctcggcaaaacttgcacaattgcaaagcatacaaggaaacaac-aaagattgtttgaagctcttgcaatttgaattgatcatcactga 13402611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 484
Target Start/End: Original strand, 16058612 - 16058737
Alignment:
Q  358 agtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattact 457  Q
    |||||| |||| ||||| ||||| || |||||||||||| ||| |||| ||||||  || |||||||||||||||||||  | ||   |||||||| ||     
T  16058612 agtgggtcccaggacacgtggcacaagaccattggtcactctccaacgactacaaaggctcaagaactctataaatagagatcaatacctcaacataaca 16058711  T
Q  458 tgcaccattgcaaaacatacaagaaaa 484  Q
    |||||||||||||| || |||||||||    
T  16058712 tgcaccattgcaaagca-acaagaaaa 16058737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 687
Target Start/End: Original strand, 16397647 - 16397750
Alignment:
Q  580 ttaaagataatttctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtacta 679  Q
    |||||||||| || ||| | | |||||||||||||| ||||||||||||||| ||||| |||  ||||    ||| | ||||||||||||||| ||||||    
T  16397647 ttaaagataacttttccttcctttcttctcttgtctgatttcaatcattcaagctccaaacatcttgt----aaagtgtcatctagctttaggagtacta 16397742  T
Q  680 aagtgtta 687  Q
    ||||||||    
T  16397743 aagtgtta 16397750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 626 - 683
Target Start/End: Original strand, 16253841 - 16253897
Alignment:
Q  626 attcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagt 683  Q
    |||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  16253841 attcaacctccatacaaattgtaa-caaagtctcatctagcttgaggggtactaaagt 16253897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 52499408 - 52499520
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||||||||   ||||| |||| |||  |||||||||||||||||| |||| |  |||||||| | ||||||||  |    
T  52499408 tcagaatgtttgcccagaatttcaagtaaaaggttgtgggacccaggacgtatggcataacaccattggacaccatacaacggctatatgagcccaaaga 52499507  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  52499508 ctctataaataga 52499520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 652 - 687
Target Start/End: Original strand, 17162131 - 17162166
Alignment:
Q  652 aaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||||||    
T  17162131 aaaatctcatctagctttaggggtactaaagtgtta 17162166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 2830441 - 2830475
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  2830441 aaatctcatctagctttaggggtactaaagtgtta 2830475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 2830617 - 2830651
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  2830617 aaatctcatctagctttaggggtactaaagtgtta 2830651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 3486880 - 3486846
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  3486880 aaatctcatctagctttaggggtactaaagtgtta 3486846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 3496203 - 3496169
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  3496203 aaatctcatctagctttaggggtactaaagtgtta 3496169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 4837519 - 4837485
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  4837519 aaatctcatctagctttaggggtactaaagtgtta 4837485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 5292341 - 5292307
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  5292341 aaatctcatctagctttaggggtactaaagtgtta 5292307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 5302000 - 5301966
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  5302000 aaatctcatctagctttaggggtactaaagtgtta 5301966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 21846917 - 21846951
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  21846917 aaatctcatctagctttaggggtactaaagtgtta 21846951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 21856509 - 21856543
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  21856509 aaatctcatctagctttaggggtactaaagtgtta 21856543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 21902780 - 21902814
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  21902780 aaatctcatctagctttaggggtactaaagtgtta 21902814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 21912372 - 21912406
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  21912372 aaatctcatctagctttaggggtactaaagtgtta 21912406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 27680006 - 27679972
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  27680006 aaatctcatctagctttaggggtactaaagtgtta 27679972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 27689661 - 27689627
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  27689661 aaatctcatctagctttaggggtactaaagtgtta 27689627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 688
Target Start/End: Complemental strand, 13402353 - 13402271
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgttaa 688  Q
    |||||||||||||| ||||||||||||||| ||||| |||  ||||    ||| ||||||| |||| ||||||||||||| ||||||    
T  13402353 ttcttctcttgtctgatttcaatcattcaagctccaaacatcttgt----aaagtctcatccagctctaggggtactaaattgttaa 13402271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 326
Target Start/End: Original strand, 16629714 - 16629814
Alignment:
Q  227 acccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataacaacattctgatgttc 325  Q
    |||||||||||||||| ||| ||||   |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| | ||||||||||||||||    
T  16629714 acccagaaactcatcagacattcatccttgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacagcaacattctgatgttc 16629813  T
Q  326 a 326  Q
    |    
T  16629814 a 16629814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 2830356 - 2830387
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  2830356 tctcatctagctttaggggtactaaagtgtta 2830387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 2830532 - 2830563
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  2830532 tctcatctagctttaggggtactaaagtgtta 2830563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 4837428 - 4837397
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  4837428 tctcatctagctttaggggtactaaagtgtta 4837397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 7846576 - 7846529
Alignment:
Q  279 atgaacatcaacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||| || ||||||||||||||||||| |||||||| ||||||||||    
T  7846576 atgaatattaacattctgatgaagaacacaacaacatgctgatgttca 7846529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 16058916 - 16058947
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  16058916 tctcatctagctttaggggtactaaagtgtta 16058947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 687
Target Start/End: Original strand, 17144271 - 17144306
Alignment:
Q  652 aaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||| |||||    
T  17144271 aaaatctcatctagctttaggggtactaaaatgtta 17144306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 687
Target Start/End: Original strand, 30652302 - 30652337
Alignment:
Q  652 aaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||| ||||||||||    
T  30652302 aaaatctcatctagctttaggggtattaaagtgtta 30652337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 53945539 - 53945508
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  53945539 tctcatctagctttaggggtactaaagtgtta 53945508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 532
Target Start/End: Complemental strand, 13402460 - 13402426
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga 532  Q
    |||||||||||| ||||||||||||||||||||||    
T  13402460 tttgaagctttatcatctgaattgatcatcactga 13402426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 17144360 - 17144394
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||| ||||||||||||    
T  17144360 aaatctcatctagctttaggggaactaaagtgtta 17144394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 486
Target Start/End: Original strand, 17161549 - 17161668
Alignment:
Q  365 cccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcacca 464  Q
    |||| |||||||||||||||  |||||| ||||||  |||||||| | ||||||||  ||||||||||||||  | |  | || | ||  ||||||||||    
T  17161549 cccaggacacatggcataac--cattggacaccctacaacggctatatgagcccaaagactctataaatagatttcatggccttagcaaaacttgcacca 17161646  T
Q  465 ttgcaaaacatacaagaaaaca 486  Q
    ||||||| |||| |||||||||    
T  17161647 ttgcaaagcatataagaaaaca 17161668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 44889650 - 44889684
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||| |||||||||||||||||||||||||    
T  44889650 aaatctcatttagctttaggggtactaaagtgtta 44889684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 687
Target Start/End: Complemental strand, 16210398 - 16210369
Alignment:
Q  658 tcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||    
T  16210398 tcatctagctttaggggtactaaagtgtta 16210369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 549 - 589
Target Start/End: Original strand, 16058805 - 16058845
Alignment:
Q  549 tttaagtgtaaatcaattctctcttatattgttaaagataa 589  Q
    |||||||||||||||||| |||||||| || ||||||||||    
T  16058805 tttaagtgtaaatcaattatctcttatctttttaaagataa 16058845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 4e-86; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 365 - 687
Target Start/End: Complemental strand, 27787224 - 27786902
Alignment:
Q  365 cccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcacca 464  Q
    ||||||||||||| ||||||||||||||||||| |  |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27787224 cccatgacacatgacataacaccattggtcacctttcaacggctacaggaacccaagaactctataaatagaagtgaaaggctcaacattacttgcacca 27787125  T
Q  465 ttgcaaaacatacaagaaaa-catcttaaa-agtgtt-tgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaat 561  Q
    ||||||| ||| |||||||| || |   |  | |||| ||||||||||||||||||||||||||||| | ||||||| ||  || |||| || |||||||    
T  27787124 ttgcaaagcat-caagaaaaacaacaagatcattgttgtgaagctttagcatctgaattgatcatcattaagatttcaaatcgtttcttaaa-tgtaaat 27787027  T
Q  562 caattctctcttatattgttaaagataatttctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcat 661  Q
    |||||||||||||| |||||||||| ||||||||||| |||| |||||||||||  |||||||||||  |||||||||||||||||||||||||||||||    
T  27787026 caattctctcttatcttgttaaaga-aatttctccctccattattctcttgtctggtttcaatcattacaactccatacaaattgtaatcaaaatctcat 27786928  T
Q  662 ctagctttaggggtactaaagtgtta 687  Q
     ||||||||||||||||||| |||||    
T  27786927 atagctttaggggtactaaattgtta 27786902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 302 - 532
Target Start/End: Complemental strand, 18712046 - 18711816
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| |      
T  18712046 gaacacaacaacattctgatgttcagaatgttcatccagattttcaagtaaaagcttgtggggcccaggacacatggcataacaccattggtcaccttac 18711947  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttg 501  Q
    || ||||| | |||||||| |||||||||||||||  | ||||||||||||||||||||||||||| ||| |||||||||||||| |   ||| ||||||    
T  18711946 aatggctatatgagcccaaaaactctataaatagagatcaaaggctcaacattacttgcaccattgaaaagcatacaagaaaacaac-agaaattgtttg 18711848  T
Q  502 aagctttagc-atctgaattgatcatcactga 532  Q
    ||||| | || || ||||||||||||||||||    
T  18711847 aagctcttgcaatttgaattgatcatcactga 18711816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 302 - 532
Target Start/End: Complemental strand, 18706111 - 18705881
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| |      
T  18706111 gaacacaacaacattctgatgttcagaatgttcatccagattttcaagtaaaagcttgtggggcccaggacacatggcataacaccattggtcaccttac 18706012  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttg 501  Q
    || ||||| | |||||||| |||||||||||||||  | ||||||||| ||||||||||||||||| ||| |||||||||||||| |   ||| ||||||    
T  18706011 aatggctatatgagcccaaaaactctataaatagagatcaaaggctcatcattacttgcaccattgaaaagcatacaagaaaacaac-agaaattgtttg 18705913  T
Q  502 aagctttagc-atctgaattgatcatcactga 532  Q
    ||||| | || || ||||||||||||||||||    
T  18705912 aagctcttgcaatttgaattgatcatcactga 18705881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 302 - 532
Target Start/End: Original strand, 26168690 - 26168920
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||| || || ||| | ||||||||||||||| |||||| |      
T  26168690 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggagctcaggacgcgtggcataacaccattagtcaccttac 26168789  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttg 501  Q
    |||||||| | |||||||| ||| |||||||||||  | ||| ||||| || |||||||||||||||||| ||||||| |||||| ||| ||| ||||||    
T  26168790 aacggctatatgagcccaaaaacactataaatagagatcaaatgctcagcactacttgcaccattgcaaagcatacaataaaacaacttgaaattgtttg 26168889  T
Q  502 aagctttagcatctgaattgatcatcactga 532  Q
    ||||| | |||  ||||||||||||||||||    
T  26168890 aagctcttgcaattgaattgatcatcactga 26168920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 302 - 486
Target Start/End: Original strand, 16321596 - 16321780
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||| ||| | ||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||| |||||| |      
T  16321596 gaacacaacaacattctaatggttagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacacatggcataacaccatttgtcaccttaa 16321695  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||| | |||||||| ||||| |||||||||  | ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  16321696 aacggctatatgagcccaaaaactcaataaatagagattaaaggctcaacattacttgcacccttgcaaagcatacaagaaaaca 16321780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 302 - 486
Target Start/End: Original strand, 16333744 - 16333928
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||| ||| | ||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||| |||||| |      
T  16333744 gaacacaacaacattctaatggttagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacacatggcataacaccatttgtcaccttaa 16333843  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||| | |||||||| ||||| |||||||||  | ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  16333844 aacggctatatgagcccaaaaactcaataaatagagattaaaggctcaacattacttgcacccttgcaaagcatacaagaaaaca 16333928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 423 - 687
Target Start/End: Original strand, 19361297 - 19361563
Alignment:
Q  423 actctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattga 522  Q
    |||||||||||| |||||||||||||||||||||||||||  ||||||| |||||||||||||| | ||| |||||||||||||||||||     |||||    
T  19361297 actctataaataaaagtgaaaggctcaacattacttgcacttttgcaaagcatacaagaaaacaacataatagtgtttgaagctttagcaaaaacattga 19361396  T
Q  523 tcatcactgagatttccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagat-aatttctcccttcattcttctcttgtctcattt 620  Q
    || ||||  ||||| | |   || | |  ||||||  |||||| | |||||||| || |||||||| || |||||||| | || ||||||||||| ||||    
T  19361397 tc-tcacaaagattccaagaagtctataaaagtgtgtatcaatatttctcttatctttttaaagataaacttctccctcccttattctcttgtctgattt 19361495  T
Q  621 caatcattcaaactc-catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||| || |||||||||||  ||| ||||||||||||||| ||||||||||||||||    
T  19361496 caatcattcaaactcacaaacaaattgtaaagaaagtctcatctagctttatgggtactaaagtgtta 19361563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 498 - 687
Target Start/End: Original strand, 15503918 - 15504100
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctccc 597  Q
    |||||||||||||||||| |||||||||||||||||||||| || | | ||||  |||||||||||||| ||| |||| | || |||||||| |||||||    
T  15503918 tttgaagctttagcatctaaattgatcatcactgagatttcaaattctctcttatagtgtaaatcaattatcttttatctagtgaaagataaattctccc 15504017  T
Q  598 ttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    | |||| || |||||||| |||| ||||||||||| ||||||||||||||     |||||||||||||||||| ||||||||||||||||    
T  15504018 tccatt-ttttcttgtctgattttaatcattcaaa-tccatacaaattgt-----aaatctcatctagctttaagggtactaaagtgtta 15504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 338 - 687
Target Start/End: Original strand, 34765669 - 34766022
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||| ||  || |||||||||||||||||||     
T  34765669 cagaatttcaagtgaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctataaaggctcaagaactctataaatagag 34765768  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  34765769 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 34765868  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataa-tttctcccttcattcttctcttgtctcatttcaatcattcaaac-t 634  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| ||||  ||| |||||||||||||||| || |  ||||||||||| |    
T  34765869 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatttcaacctccattcttctcttgtctgatctatatcattcaaacct 34765968  T
Q  635 ccatacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  34765969 ccatacaaattgtaaagaaaagtctcatctagctttaggggtactaaagtgtta 34766022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 552 - 687
Target Start/End: Original strand, 18333243 - 18333380
Alignment:
Q  552 aagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaa 649  Q
    |||| ||||||||| | |||||||| || |||||||||| | ||||||| |||||||||||||| | || |   ||||||||||||||||||||||||||    
T  18333243 aagtataaatcaatatttctcttatctttttaaagataaatctctccctccattcttctcttgtttgatctatttcattcaaactccatacaaattgtaa 18333342  T
Q  650 tcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
     |||| ||||||||||||||||||||||||||||||||    
T  18333343 acaaagtctcatctagctttaggggtactaaagtgtta 18333380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 24505167 - 24505078
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcacc 397  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||    
T  24505167 aacaacattctgaagttcagaatgttcacccatattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcacc 24505078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 322 - 486
Target Start/End: Original strand, 1597111 - 1597275
Alignment:
Q  322 gttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaag 421  Q
    ||||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||     
T  1597111 gttcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaa 1597210  T
Q  422 aactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     ||||||||||||||  | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  1597211 gactctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 1597275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 30657926 - 30657745
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||| |||   ||| ||||||||||||||||| | || |      
T  30657926 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggtcca--gcacgtggcataacaccattgggc-ccttac 30657830  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||| ||| | ||||||||  ||||||||||||||  | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  30657829 aacgactatatgagcccaaagactctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 30657745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 790992 - 790809
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||  |||||| |||  |||| ||||||||||||||||| || | |      
T  790992 gaacacaacaacattctgatgttcagaatgttcacccagaattt-aagtaaaagcttgtggggtccagtacacgtggcataacaccattggacatcttac 790894  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||   ||||||||  ||||||||||||||  | |  | || | ||  ||||||||||||||||| ||||||||||||||    
T  790893 aacggctatgtgagcccaaagactctataaatagagatcatggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 790809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 14791909 - 14792071
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  14791909 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 14792008  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  14792009 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 14792071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 18170180 - 18170342
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  18170180 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 18170279  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  18170280 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 18170342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 24930791 - 24930629
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  24930791 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 24930692  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || | || | ||  ||| ||||||||||||| ||||||||||||||    
T  24930691 ctctataaatagagatcaaggccttagcaaaactcgcaccattgcaaagcatacaagaaaaca 24930629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 623 - 687
Target Start/End: Complemental strand, 8562763 - 8562699
Alignment:
Q  623 atcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  8562763 atcattcaaactccatacaaattgtaaacaaagtctcatatagctttaggggtactaaagtgtta 8562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 338 - 486
Target Start/End: Complemental strand, 24921741 - 24921593
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||||     
T  24921741 cagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagag 24921642  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | || | ||  ||| ||||||||||||| ||||||||||||||    
T  24921641 atcaaggccttagcaaaactcgcaccattgcaaagcatacaagaaaaca 24921593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 343 - 486
Target Start/End: Original strand, 18160387 - 18160530
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |||||||||||||| |        
T  18160387 tttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaggactctataaatagagggctt 18160486  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | ||  ||||||||||||||||| ||||||||||||||    
T  18160487 ggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 18160530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 3286153 - 3286315
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  3286153 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 3286252  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  3286253 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 3286315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 338 - 512
Target Start/End: Complemental strand, 8563012 - 8562838
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| |||||||||||||||  || |||||||||||||||||||     
T  8563012 cagaatttcaagtgaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctctaacggctacaaaggctcaagaactctataaatagag 8562913  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagca 512  Q
     | ||   |||| ||| ||   |||  ||||||| |||||||||||||| | ||| |||||||||||||||||||    
T  8562912 atcaagacctcagcataacacacacatttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagca 8562838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 12455360 - 12455522
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  12455360 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 12455459  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  12455460 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 12455522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 16898253 - 16898415
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  16898253 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 16898352  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  16898353 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 16898415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 16908906 - 16909068
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  16908906 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 16909005  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  16909006 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 16909068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 20912589 - 20912751
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  20912589 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 20912688  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  20912689 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 20912751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 687
Target Start/End: Complemental strand, 30657588 - 30657364
Alignment:
Q  464 attgcaaaacatacaag-aaaacatcttaaaagtg-tttgaagctttagcatctgaattgatcatcactg-agatt-tccaactgtatctttaagtgtaa 559  Q
    |||||||| |||||||| |||||| |||||   || |||||||||||||||||||||||||||||||||| ||||| |  |  | | ||||  |||||||    
T  30657588 attgcaaagcatacaagaaaaacaacttaaggttgttttgaagctttagcatctgaattgatcatcactgaagattctttatatct-tcttgtagtgtaa 30657490  T
Q  560 atcaattc--tctcttatattgttaaagataatttctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatc 657  Q
    ||||||||  ||| |||| |  |||||||||| || ||| | | |||||||||||||| ||||||||||||||| || || |||  ||||    ||| ||    
T  30657489 atcaattctttctgttatctctttaaagataacttttccttcctttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgt----aaagtc 30657394  T
Q  658 tcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||    
T  30657393 tcatctagctttaggggtactaaagtgtta 30657364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 31357867 - 31357979
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  31357867 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 31357966  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  31357967 ctctataaataga 31357979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 31367596 - 31367708
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  31367596 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 31367695  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  31367696 ctctataaataga 31367708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 791100 - 790999
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    |||||||||||||||||| ||| |||| | |||||||| ||  |||    ||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  791100 aaacccagaaactcatcagacattcatcattgatgaactcagatgaagaacatcatgaatatcaacattctgatgaagaacacaacaacattctgatgtt 791001  T
Q  325 ca 326  Q
    ||    
T  791000 ca 790999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 580 - 687
Target Start/End: Original strand, 24692369 - 24692475
Alignment:
Q  580 ttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtact 678  Q
    |||||||||| | ||||||| ||||| ||| |||||| || |  ||||||||||||||| |||||||||||||  | |||||||||||||||| ||||||    
T  24692369 ttaaagataaatctctccctccattcatctattgtctgatctatatcattcaaactccacacaaattgtaatc--agtctcatctagctttagaggtact 24692466  T
Q  679 aaagtgtta 687  Q
    |||||||||    
T  24692467 aaagtgtta 24692475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 338 - 486
Target Start/End: Original strand, 18201512 - 18201660
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| |  |||||||  |||| |||||||||     
T  18201512 cagaatttcaagttaaagattgtgggacccaggacacatggcataacaccattggacaccctacaacggctatattagcccaaagactcgataaatagag 18201611  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  18201612 atcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 18201660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 338 - 486
Target Start/End: Original strand, 29540761 - 29540909
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| |||||  |||||  ||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||||     
T  29540761 cagaatttcaagttaaagcttgtgggaaccaagacacatggcataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagag 29540860  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     |    | || | ||  ||||||||||||||||| ||||||||||||||    
T  29540861 atcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 29540909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 602 - 687
Target Start/End: Original strand, 18201954 - 18202036
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| ||||| |||  |||||   ||| |||||||||||||||||| |||||||||||||    
T  18201954 ttcttctcttgtctgatttcaatcattcaagctccaaacatcttgta---aaagtctcatctagctttagggatactaaagtgtta 18202036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 486
Target Start/End: Complemental strand, 26020499 - 26020356
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    |||||||| |||||  ||||| |||| |||| |||||||||||||||||| || |||  |||||||| | ||||||||  ||||||||||||||  | ||    
T  26020499 tttcaagttaaagcttgtgggacccaggacatatggcataacaccattggacatcctaaaacggctatatgagcccaaagactctataaatagagatcaa 26020400  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     |  | | ||  ||||||||||||||||| ||||||||||||||    
T  26020399 ggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 26020356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 17826456 - 17826517
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  17826456 cattcaacctccatacaaattgtaa-caaagtctcatctagctttatgggtactaaagtgtta 17826517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 633 - 687
Target Start/End: Original strand, 20968454 - 20968507
Alignment:
Q  633 ctccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  20968454 ctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 20968507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 596 - 687
Target Start/End: Complemental strand, 26020069 - 26019982
Alignment:
Q  596 ccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||| |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  26020069 ccttccttcttctcttgtctgatttcaatcattcaagcttcaaacatgttgtaa----agtctcatctagctttaggggtactaaagtgtta 26019982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 687
Target Start/End: Original strand, 1597566 - 1597647
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  1597566 ttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 1597647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 26168552 - 26168656
Alignment:
Q  218 attggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattc 317  Q
    |||||||||| |||||||||||||| ||| ||||   |||||||||||  |||    ||| ||||| |||||||||||||||||||||| | ||||||||    
T  26168552 attggataaagccagaaactcatcagacattcatccttgatgaacccagatgaagaacatcatgaatatcaacattctgatgaagaacacagcaacattc 26168651  T
Q  318 tgatg 322  Q
    |||||    
T  26168652 tgatg 26168656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 30657985 - 30657933
Alignment:
Q  274 tcatgatgaacatcaacattctgatgaagaacataacaacattctgatgttca 326  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  30657985 tcatcatgaacatcaacattctgatgaagaacacagcaacattctgatgttca 30657933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 16321475 - 16321589
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa-cattctgatgaagaacataaca 311  Q
    |||| |||| || ||||||||||||||||| ||| |||| | |||||||||||| |||    ||| ||||| ||||| ||||||||||||||||| | |     
T  16321475 cacgtattgaatgaacccagaaactcatcagacattcatcattgatgaacccaaatgaagaacatcatgaatatcaaacattctgatgaagaacacagct 16321574  T
Q  312 acattctgatgttca 326  Q
    |||||||||||||||    
T  16321575 acattctgatgttca 16321589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 16333623 - 16333737
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa-cattctgatgaagaacataaca 311  Q
    |||| |||| || ||||||||||||||||| ||| |||| | |||||||||||| |||    ||| ||||| ||||| ||||||||||||||||| | |     
T  16333623 cacgtattgaatgaacccagaaactcatcagacattcatcattgatgaacccaaatgaagaacatcatgaatatcaaacattctgatgaagaacacagct 16333722  T
Q  312 acattctgatgttca 326  Q
    |||||||||||||||    
T  16333723 acattctgatgttca 16333737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 18706232 - 18706118
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataaca 311  Q
    |||| ||||||||||||||||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| | | |||||| |||||||||||| | ||    
T  18706232 cacgtattggataaacccagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaataccaaacattttgatgaagaacacagca 18706133  T
Q  312 acattctgatgttca 326  Q
    |||||||||||||||    
T  18706132 acattctgatgttca 18706118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 18712167 - 18712053
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataaca 311  Q
    |||| ||||||||||||||||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| | | |||||| |||||||||||| | ||    
T  18712167 cacgtattggataaacccagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaataccaaacattttgatgaagaacacagca 18712068  T
Q  312 acattctgatgttca 326  Q
    |||||||||||||||    
T  18712067 acattctgatgttca 18712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 26168644 - 26168683
Alignment:
Q  287 caacattctgatgaagaacataacaacattctgatgttca 326  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  26168644 caacattctgatgaagaacacaacaacattctgatgttca 26168683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 640 - 687
Target Start/End: Original strand, 26169034 - 26169080
Alignment:
Q  640 caaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  26169034 caaattgtaatcaag-tctcatctagctttaggggtactaaagtgtta 26169080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 1597789 - 1597823
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  1597789 aaatctcatctagctttaggggtactaaagtgtta 1597823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 7754154 - 7754120
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  7754154 aaatctcatctagctttaggggtactaaagtgtta 7754120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 17826164 - 17826222
Alignment:
Q  328 aatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacac 386  Q
    ||||||||| |||||||||||||||||||  ||||| |||| ||||| |||||||||||    
T  17826164 aatgttcacccagattttcaagtaaaagcttgtgggacccaggacacgtggcataacac 17826222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 24505218 - 24505180
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  24505218 aacattctgatgaagaacacaacaacattctgatgttca 24505180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 26019840 - 26019806
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  26019840 aaatctcatctagctttaggggtactaaagtgtta 26019806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 29541050 - 29541111
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||| ||||||| |||| ||| ||||| ||||||||||||||||||||||    
T  29541050 cattcaacctccatacagattgtaa-caaagtcttatctaactttaggggtactaaagtgtta 29541111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 30657310 - 30657276
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  30657310 aaatctcatctagctttaggggtactaaagtgtta 30657276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 589
Target Start/End: Complemental strand, 22223106 - 22223066
Alignment:
Q  549 tttaagtgtaaatcaattctctcttatattgttaaagataa 589  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  22223106 tttaagtgtaaatcaattctctcttatctttttaaagataa 22223066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 589
Target Start/End: Complemental strand, 22248941 - 22248901
Alignment:
Q  549 tttaagtgtaaatcaattctctcttatattgttaaagataa 589  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  22248941 tttaagtgtaaatcaattctctcttatctttttaaagataa 22248901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 790451 - 790420
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  790451 tctcatctagctttaggggtactaaagtgtta 790420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 1597704 - 1597735
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  1597704 tctcatctagctttaggggtactaaagtgtta 1597735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 18202093 - 18202124
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  18202093 tctcatctagctttaggggtactaaagtgtta 18202124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 22222910 - 22222879
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  22222910 tctcatctagctttaggggtactaaagtgtta 22222879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 22248745 - 22248714
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  22248745 tctcatctagctttaggggtactaaagtgtta 22248714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 532
Target Start/End: Original strand, 18201846 - 18201880
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga 532  Q
    |||||||||||||||| ||||||||||||||||||    
T  18201846 tttgaagctttagcatgtgaattgatcatcactga 18201880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 18202178 - 18202212
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| ||||||||||||||||||||||    
T  18202178 aaatctcatctaactttaggggtactaaagtgtta 18202212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 30658182 - 30658125
Alignment:
Q  59 gcaaatctcccaaaagcatggacctgaaga-tgcagaaccactattctctctcctgcac 116  Q
    |||||||||| | ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  30658182 gcaaatctcctagaagcatggacctgaagattgcagatccacta-tctctctcctgcac 30658125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 658 - 687
Target Start/End: Complemental strand, 790537 - 790508
Alignment:
Q  658 tcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||    
T  790537 tcatctagctttaggggtactaaagtgtta 790508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 639 - 687
Target Start/End: Complemental strand, 18705768 - 18705721
Alignment:
Q  639 acaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  ||||||||| |||| |||||||||||||||||    
T  18705768 acaaattgtaatcaag-tctcatctaacttttggggtactaaagtgtta 18705721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 639 - 687
Target Start/End: Complemental strand, 18711703 - 18711656
Alignment:
Q  639 acaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  ||||||||| |||| |||||||||||||||||    
T  18711703 acaaattgtaatcaag-tctcatctaacttttggggtactaaagtgtta 18711656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 656 - 688
Target Start/End: Complemental strand, 22222998 - 22222966
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgttaa 688  Q
    ||||||||||||||||| |||||||||||||||    
T  22222998 tctcatctagctttaggagtactaaagtgttaa 22222966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 656 - 688
Target Start/End: Complemental strand, 22248833 - 22248801
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgttaa 688  Q
    ||||||||||||||||| |||||||||||||||    
T  22248833 tctcatctagctttaggagtactaaagtgttaa 22248801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 161; Significance: 2e-85; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 310 - 684
Target Start/End: Complemental strand, 28557 - 28181
Alignment:
Q  310 caacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggcta 409  Q
    ||||||||||||| ||||||||||    |||||||||||||||||  |||||||||| | ||||| ||||||| || |||||||||||||| || |||||    
T  28557 caacattctgatggtcagaatgttataccagattttcaagtaaaactcagtggggcctaggacacgtggcatatcatcattggtcaccctccaatggcta 28458  T
Q  410 caagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa-catcttaaaagtgttt-gaagctt 507  Q
     | |||| ||| |||| ||||||||||  | |||||||||||||||| |||||||||||||| |||| ||||||| || | | | | ||||| |||||||    
T  28457 tatgagctcaaaaactgtataaatagatatcaaaggctcaacattacctgcaccattgcaaagcatataagaaaaacaaccttagattgttttgaagctt 28358  T
Q  508 tagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctcccttcattcttc 607  Q
    ||||||||||||| |||||||| |||||||| || ||| ||||  |||||||||||||||  |||||| ||||||| ||||| || ||||| |||| |||    
T  28357 tagcatctgaattcatcatcaccgagatttcaaattgtctcttgtagtgtaaatcaattccatcttatcttgttaaggataagttgtccctccattattc 28258  T
Q  608 tcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtg 684  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  28257 tcttgtctgatttgaatgattcaaactccatacaaattgtaatcaaaatctcatctagctttaggcgtagtaaagtg 28181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 25 - 299
Target Start/End: Complemental strand, 28818 - 28545
Alignment:
Q  25 gacacgtatgagatttggtactctacaataccatgcaaatctcccaaaagcatggacctgaagatgcagaaccactattctctctcctgcacacaatccg 124  Q
    ||||| |||||||||||||| | ||||||| || |||||| ||    |||||||  ||||||| |||||| | ||||  ||||| ||||||||||||||     
T  28818 gacacatatgagatttggtattgtacaatatcaggcaaatatcattgaagcatgagcctgaagctgcagatcaacta--ctctcgcctgcacacaatcca 28721  T
Q  125 atgcatatttggaaaaagtttatgt-tgcaactttctgatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatcataaggcacgcattgga 223  Q
    ||||| |||||||| || ||||| | |  ||| ||||||||||||||  |||| ||||||||||||||||  |||| ||| | |||||||||||||||||    
T  28720 atgcaaatttggaacaactttatctatttaacattctgatgtttgtgccaaagtcacaacacatgaataaatcccaaaaagttataaggcacgcattgga 28621  T
Q  224 taaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatg 299  Q
    |||||||||||||||||| |||| ||||||||||||||||||  |||   |||| |||||||||||||||||||||    
T  28620 taaacccagaaactcatcttacattcataaatgatgaacccagatgaagatcataatgaacatcaacattctgatg 28545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 1e-76; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 14 - 326
Target Start/End: Original strand, 22956555 - 22956868
Alignment:
Q  14 aatcagagatggacacgtatgagatttggtactctacaataccatgcaaatctcccaaaagcatggacctgaagatgcagaaccactattctctctcctg 113  Q
    ||||| |||||||||| ||||||||||| |||| ||||||| ||||||||||||| | || |||||   ||||| || | ||||||||||||||||||||    
T  22956555 aatcaaagatggacacatatgagatttgttactatacaatatcatgcaaatctcctagaaacatgggaatgaagctgaaaaaccactattctctctcctg 22956654  T
Q  114 cacacaatccgatgcatatttggaaaaagtttatgtt-gcaactttctgatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatcataagg 212  Q
    |||||||||| ||||| || ||||| || |||||    ||||| ||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||    
T  22956655 cacacaatccaatgcagatctggaataactttatccaagcaacattcagatgtttgtgcaaaagacacaacacatgaataatgccaaaaaaatcataagg 22956754  T
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaa 312  Q
    ||| ||||||||||||| |||||||||||||||||| ||||||||||||||||  |||   ||||||| |||||||||||||| |||||||||| |||||    
T  22956755 cacacattggataaacctagaaactcatcatacacttataaatgatgaacccagatgaagatcatgataaacatcaacattctaatgaagaacacaacaa 22956854  T
Q  313 cattctgatgttca 326  Q
    | |||| |||||||    
T  22956855 cgttctaatgttca 22956868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 324 - 585
Target Start/End: Complemental strand, 18058833 - 18058571
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    |||||||||| || |||| ||||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||  |||||||| | |||||||| ||    
T  18058833 tcagaatgtttacccagaatttcaagtaaaagcttgtggggcccaagacacatggcataacaccattggacaccctacaacggctatatgagcccaaaaa 18058734  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatct-gaattga 522  Q
    |||||||||||||  | |||| |||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||||||||||||| | |||||||    
T  18058733 ctctataaatagagatcaaagactcaacattacttgcaccattgcaaagcatataagaaaacatctgaaatgtgtttgaagctttagcatttcgaattga 18058634  T
Q  523 tcatcactg-agatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaag 585  Q
    ||||||||| | |||| ||  ||| |||| ||||||||||||||||| |||||| |||||||||    
T  18058633 tcatcactggacattttcat-tgtctcttgaagtgtaaatcaattctttcttatcttgttaaag 18058571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 302 - 506
Target Start/End: Complemental strand, 26193221 - 26193017
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |      
T  26193221 gaacacaacaaaattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 26193122  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttg 501  Q
    |||||||| | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| |||||||||||||| ||| |   ||||||    
T  26193121 aacggctatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaacaacttgattttgtttg 26193022  T
Q  502 aagct 506  Q
    |||||    
T  26193021 aagct 26193017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 20317815 - 20317631
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |      
T  20317815 gaacttaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttac 20317716  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||| | ||| ||||  ||| ||||||||||  | |||||| || ||||||||||||||||||||| ||||||||||||||    
T  20317715 aacggctatatgagtccaaagactatataaatagagatcaaaggcgcagcattacttgcaccattgcaaagcatacaagaaaaca 20317631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 303 - 532
Target Start/End: Complemental strand, 18096706 - 18096476
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctcta 402  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||   |||||||||||||||  |||| |||||||||||| || |||  |    
T  18096706 aacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagtgtgtggggcccatgacatgtggcttaacaccattggacatcctaca 18096607  T
Q  403 acggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttga 502  Q
    | ||||| | ||||||||  ||||||||||||||  |  |||||||||||||||||||||||||||||| |||||||||||||| ||| |   |||||||    
T  18096606 atggctatatgagcccaaagactctataaatagagatctaaggctcaacattacttgcaccattgcaaagcatacaagaaaacaacttgattttgtttga 18096507  T
Q  503 agctttagcatctg-aattgatcatcactga 532  Q
    |||| | |||  || ||||||||||||||||    
T  18096506 agctcttgcaattgaaattgatcatcactga 18096476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 308 - 486
Target Start/End: Original strand, 20314725 - 20314903
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||| |||||||| || ||||||||||| |||| ||  |||||||||| ||||| |||||||||||||||||||| | |  ||||||    
T  20314725 aacaacattctgatgtttagaatgtttacccagattttcaattaaatgcttgtggggcccaggacacgtggcataacaccattggtcatcttacaacggc 20314824  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  20314825 tatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaaca 20314903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 200 - 483
Target Start/End: Complemental strand, 21821342 - 21821059
Alignment:
Q  200 gaaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatg 299  Q
    |||||||||| ||||| ||||| | |||||||||||||||| ||| | |||| |||||||||||||  |||    ||| || ||||| ||||||||||||    
T  21821342 gaaaatcatatggcacacattgaacaaacccagaaactcataataaattcatcaatgatgaacccagatgaagaacatcataaacattaacattctgatg 21821243  T
Q  300 aagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccct 399  Q
    ||||||| ||||||||||||||| ||| ||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| || ||||||| |||  ||    
T  21821242 aagaacacaacaacattctgatggtcaaaatgttcacccatattttcaagtaaaagctagtggggcccaggacacgtggcaaaagaccattgatcatgct 21821143  T
Q  400 ctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaa 483  Q
      ||||| || | ||||||||  | ||||||||||||  | || |  ||| ||| ||||||||| ||||||| |||||||||||    
T  21821142 acaacggttatatgagcccaaacattctataaatagagatcaaggcttcatcataacttgcacctttgcaaagcatacaagaaa 21821059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 329 - 486
Target Start/End: Original strand, 27066395 - 27066552
Alignment:
Q  329 atgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactcta 428  Q
    |||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||| | |  |||||||| | ||||||||  ||||||    
T  27066395 atgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcatcttacaacggctatatgagcccaaagactcta 27066494  T
Q  429 taaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  27066495 taaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaaca 27066552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 20328291 - 20328113
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||||||  ||||| |||| ||||| |||||||||||||||||||||| |  ||||||    
T  20328291 aacaacattctgatgttcataatgttcaccctgattttcaagtaaaagcttgtgggtcccaggacacgtggcataacaccattggtcaccttacaacggc 20328192  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||| ||||  ||| ||||||||||  | |||||| || ||||||||||||||||||||| ||||||||||||||    
T  20328191 tatatgagtccaaagactatataaatagagatcaaaggcgcagcattacttgcaccattgcaaagcatacaagaaaaca 20328113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 338 - 687
Target Start/End: Complemental strand, 1974433 - 1974082
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  1974433 cagaatttcaagttaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 1974334  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  1974333 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 1974234  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  ||||||||| |||    
T  1974233 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaacctc 1974134  T
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  1974133 catacaaattgtaaagaaagtctcatctagctttaggggtactaaagtgtta 1974082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 302 - 486
Target Start/End: Original strand, 22961177 - 22961361
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||| ||| ||||||| ||||| |||||||||||||||||||  ||||||||||  |||| ||||||||||||||||| ||||||      
T  22961177 gaacacaacaacattctaatggtcagaattttcacccagattttcaagtaaaagcttgtggggcccagaacacgtggcataacaccattggacaccctac 22961276  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||| |||| | |||||||| |||||||||||||||  ||||   || ||||  ||||||||||||||||| ||||||||||||||    
T  22961277 aactgctatatgagcccaaaaactctataaatagagatgaagaccttaacaaaacttgcaccattgcaaatcatacaagaaaaca 22961361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 25039186 - 25039002
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| ||||||| |||||  ||| |||||||||||||   |||||||||| ||||| || |||||||||||||| ||||||      
T  25039186 gaacacaacaacattctgatggtcagaattttcacctagagtttcaagtaaaagtatgtggggcccaagacacgtgacataacaccattggacaccctac 25039087  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||| | ||||||||  ||||||||||||||  |  |||||||||||||||||||||||||||||| |||| || ||||||    
T  25039086 aacggctatatgagcccaaagactctataaatagagatctaaggctcaacattacttgcaccattgcaaagcatataataaaaca 25039002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 25044398 - 25044214
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| ||||||| |||||  ||| |||||||||||||   |||||||||| ||||| || |||||||||||||| ||||||      
T  25044398 gaacacaacaacattctgatggtcagaattttcacctagagtttcaagtaaaagtatgtggggcccaagacacgtgacataacaccattggacaccctac 25044299  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||| | ||||||||  ||||||||||||||  |  |||||||||||||||||||||||||||||| |||| || ||||||    
T  25044298 aacggctatatgagcccaaagactctataaatagagatctaaggctcaacattacttgcaccattgcaaagcatataataaaaca 25044214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 370 - 686
Target Start/End: Complemental strand, 2370135 - 2369819
Alignment:
Q  370 gacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgca 469  Q
    ||||||||||||||||| ||| | |||| |  |||||||| | |||||||| |||||||||||||||  | ||||| ||||||||| ||||| |||||||    
T  2370135 gacacatggcataacacaattagacaccttacaacggctatatgagcccaaaaactctataaatagagatcaaaggatcaacattaattgcaacattgca 2370036  T
Q  470 aaacatacaagaaaacatcttaaaagtgtttgaagctttagc-atctgaattgatcatcactgagatttccaactgt-atcttt-aagtgtaaatcaatt 566  Q
    || ||||||||||||||| | ||| |||||||||||| | || || ||||||||||||||||||    ||   || |  |||||  ||||||||||||||    
T  2370035 aagcatacaagaaaacatttgaaacgtgtttgaagctcttgcaatttgaattgatcatcactgaatactctttctatcttctttgtagtgtaaatcaatt 2369936  T
Q  567 ctctcttatat---tgttaaagataatttctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatct 663  Q
    || |||  |||   | |||||||||| ||||   | |||||  ||||||| |  |||||| || || |||||||||||||||||||||||| ||||||||    
T  2369935 ctttctattatctcttttaaagataacttct---tccattc--ctcttgtttgttttcaaaca-tccaactccatacaaattgtaatcaaagtctcatct 2369842  T
Q  664 agctttaggggtactaaagtgtt 686  Q
    | |||||||||||||||||||||    
T  2369841 aactttaggggtactaaagtgtt 2369819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 71 - 512
Target Start/End: Original strand, 34822997 - 34823450
Alignment:
Q  71 aaagcatggacctgaagatgcagaaccactattctctctcctgcacacaatccgatgcatatttggaaaaagtttatgttgcaactttctgatgtttgtg 170  Q
    ||||||||| | |||||||||||| ||||| | |||||||||||||||| ||| | ||| |||||||||    || |    |||| |||||| |  ||||    
T  34822997 aaagcatgggcatgaagatgcagatccactttcctctctcctgcacacattccaaggcaaatttggaaaggcattgtccaacaacattctgaagcatgtg 34823096  T
Q  171 taaaagacacaacacatgaataatgcccagaaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactga 270  Q
     ||| ||||| || |||| | || ||||||||| ||||  | |||||||  ||| |||||| |||||||||||||| ||||   |||||||| |   |||    
T  34823097 caaatgacactactcatggacaaagcccagaaattcatctgacacgcatctgatgaacccataaactcatcatacattcatgtgtgatgaactcgtatga 34823196  T
Q  271 ttgtcatgatgaacat--caacattctgatg-------aagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtg 361  Q
       ||||||||||||   |||||||||||||       ||||||| ||||||||| ||||||||||||||||  | || |||||||||||||| |  |||    
T  34823197 agatcatgatgaacacaacaacattctgatgtattctcaagaacacaacaacattttgatgttcagaatgtttgcccatattttcaagtaaaaactggtg 34823296  T
Q  362 gggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaag-aactctataaatagaagtgaaaggctcaacattacttgc 460  Q
    |  |||| |||| |||||| || | |||||||||| ||| ||| |||| |||||  |||| |||||||||||||| |||| || ||||| |||||| | |    
T  34823297 gaccccaggacatatggcacaaaatcattggtcactctccaacagctataagaggtcaagaaactctataaataggagtggaatgctcatcattacatac 34823396  T
Q  461 accattgcaaaacatacaagaaaaca---tcttaaaagtgtttgaagctttagca 512  Q
    ||| ||||||| ||||||||||||||   | ||||||||||||||||||||||||    
T  34823397 acc-ttgcaaagcatacaagaaaacaacttattaaaagtgtttgaagctttagca 34823450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 302 - 436
Target Start/End: Original strand, 4950813 - 4950947
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||  |||||| ||||||||||| |      
T  4950813 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacaagtgaaataacaacattggtcaccttac 4950912  T
Q  402 aacggctacaagagcccaagaactctataaataga 436  Q
    |||||||| | |||||||| |||||||||||||||    
T  4950913 aacggctatatgagcccaaaaactctataaataga 4950947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 302 - 506
Target Start/End: Complemental strand, 25823225 - 25823021
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtgggg-cccatgacacatggcataacaccattggtcaccctc 400  Q
    ||||| ||||||||||||||| | | ||||||||| |||||||||||||||||||  |||||| |||||||||| ||| |||||| ||||| ||||| |     
T  25823225 gaacacaacaacattctgatggttaaaatgttcac-cagattttcaagtaaaagcttgtgggggcccatgacacgtggtataacatcattgttcacctta 25823127  T
Q  401 taacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgttt 500  Q
     |||||||| | ||| ||||  ||||||||||||||  |  || ||||||||||||||||||||||||||| ||| |||| ||||| ||| | | |||||    
T  25823126 caacggctatatgagtccaaagactctataaatagatatctaaagctcaacattacttgcaccattgcaaagcatgcaagtaaacaacttgagattgttt 25823027  T
Q  501 gaagct 506  Q
    ||||||    
T  25823026 gaagct 25823021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 465 - 687
Target Start/End: Complemental strand, 52949319 - 52949095
Alignment:
Q  465 ttgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaa 564  Q
    ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  ||||| | |   || |    |||||||||||||    
T  52949319 ttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaacattgatcatcacaaagattccaagaagtcttcaaaagtgtaaatcaa 52949220  T
Q  565 t-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatc 662  Q
    | | |||||||| || |||||||||| | |||||||  |||| |||||||| | || |  ||||||||||||||||||||||||||| |||| |||||||    
T  52949219 tatttctcttatctttttaaagataaatatctccctctattcatctcttgtttgatctatatcattcaaactccatacaaattgtaaacaaagtctcatc 52949120  T
Q  663 tagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||    
T  52949119 tagctttaggggtactaaagtgtta 52949095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 338 - 687
Target Start/End: Complemental strand, 1989220 - 1988869
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| ||||  |||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  1989220 cagaatttcaagttaaagttggtgggtcccagaacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 1989121  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| |||      |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  1989120 atcaagacctcagcatacaacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 1989021  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  ||||||||| ||     
T  1989020 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaacctt 1988921  T
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  1988920 catacaaattgtaaagaaagtctcatctagctttaggggtactaaagtgtta 1988869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 201 - 326
Target Start/End: Original strand, 21792899 - 21793024
Alignment:
Q  201 aaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatga 300  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||| |||| |||||||||||||  |||    ||| || |||||||||||||| ||||    
T  21792899 aaaatcatatggcacgcattgaagaaacccagaaactcatcatacattcatcaatgatgaacccagatgaagaacatcataaacatcaacattcttatga 21792998  T
Q  301 agaacataacaacattctgatgttca 326  Q
    |||||| |||||||||||||||||||    
T  21792999 agaacacaacaacattctgatgttca 21793024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 324 - 532
Target Start/End: Original strand, 18383664 - 18383871
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||||||||||||||  ||||| |||| |||||||||||||||| |||||| ||||||  ||||||||   ||||||||  |    
T  18383664 tcagaatgtttgcccagaatttcaagtaaaagcttgtgggacccaggacacatggcataacatcattggacaccctacaacggctatttgagcccaaaga 18383763  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgat 523  Q
    ||||||||||| |  | | ||||||| ||||||||||| ||||||||| |||||||||||||| | | ||| |||||||||||   |||  | |||||||    
T  18383764 ctctataaataaagatcacaggctcagcattacttgcatcattgcaaagcatacaagaaaacaac-tgaaattgtttgaagctcctgcaattaaattgat 18383862  T
Q  524 catcactga 532  Q
    |||||||||    
T  18383863 catcactga 18383871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 359 - 486
Target Start/End: Original strand, 2117195 - 2117322
Alignment:
Q  359 gtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattactt 458  Q
    ||||| |||||||||||||||||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||||  | || | || | ||  ||||    
T  2117195 gtgggacccatgacacatggcataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagagatcaaggccttagcaaaactt 2117294  T
Q  459 gcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||||||||||||||||||    
T  2117295 gcaccattgcaaaacatacaagaaaaca 2117322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 302 - 485
Target Start/End: Original strand, 37012279 - 37012461
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| ||| ||||||||| |||||||||||||||||||  |||||||| | |||||  |||||||||||||||| |||| |      
T  37012279 gaacacaacaacattctgatggtcaaaatgttcacccagattttcaagtaaaagcttgtggggcctaggacac-gggcataacaccattgggcaccttac 37012377  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaac 485  Q
    |||| ||| | ||||||||  ||||||||||||||  | || | || | ||  ||||||||||||||||| |||||| ||||||    
T  37012378 aacgactatatgagcccaaagactctataaatagatatcaaggccttagcaaaacttgcaccattgcaaagcatacaggaaaac 37012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 20309163 - 20309252
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcacc 397  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||  || ||||||| ||||| ||||||||||||||||||||||    
T  20309163 aacaacattctgatgttaagaatgttcacccatattttcaagtaaaagcttgtagggcccaggacacgtggcataacaccattggtcacc 20309252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 302 - 391
Target Start/End: Original strand, 49333633 - 49333722
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattg 391  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||| ||| ||||| ||||||||||||||||    
T  49333633 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggtccaggacacgtggcataacaccattg 49333722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 338 - 493
Target Start/End: Original strand, 13965182 - 13965337
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| |||||  ||||| ||||  |||||||||||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||||     
T  13965182 cagaatttcaagttaaagcttgtgggacccagtacacatggcataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagag 13965281  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaa 493  Q
     | || |  ||| ||  ||||||| ||||||||| |||||||||||||| ||||||    
T  13965282 atcaaggcttcagcaaaacttgcatcattgcaaagcatacaagaaaacaacttaaa 13965337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 16155190 - 16155352
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  16155190 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 16155289  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  16155290 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 16155352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 21458935 - 21459097
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  21458935 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 21459034  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  21459035 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 21459097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 25019775 - 25019937
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| ||||||||||||| |||||||||||||| || |||  |||||||| | ||||||||  |    
T  25019775 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccatgacacatgtcataacaccattggacatcctacaacggctatatgagcccaaaga 25019874  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  25019875 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 25019937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 687
Target Start/End: Original strand, 8540857 - 8540926
Alignment:
Q  618 tttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||| |||||||||  | |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8540857 tttcaaacattcaaacctcttacaaattgtaaacaaaatctcatctagctttaggggtactaaagtgtta 8540926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 687
Target Start/End: Original strand, 8606096 - 8606165
Alignment:
Q  618 tttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||| |||||||||  | |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8606096 tttcaaacattcaaacctcttacaaattgtaaacaaaatctcatctagctttaggggtactaaagtgtta 8606165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 37012159 - 37012272
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaa 312  Q
    |||| ||||||||||||||||||||||||| ||| |||| | |||||||||||  |||    ||| ||||||||||||| ||||||||||||||   |||    
T  37012159 cacgtattggataaacccagaaactcatcaaacattcatcattgatgaacccagatgaagaacatcatgaacatcaacaatctgatgaagaacacggcaa 37012258  T
Q  313 cattctgatgttca 326  Q
    ||||||||||||||    
T  37012259 cattctgatgttca 37012272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 498 - 687
Target Start/End: Original strand, 37012655 - 37012841
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga-gatt-tccaactgtatctttaagtgtaaatcaattctctct--tatattgttaaagataatttc 593  Q
    ||||||||||||||||||||||||||||||||||| |||| |  |  | | ||||  |||||||||||||| | |||  ||| || |||||||||||||     
T  37012655 tttgaagctttagcatctgaattgatcatcactgaagattctttatatct-tcttgtagtgtaaatcaattatttctgttatctttttaaagataatttt 37012753  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||| | | |||||||||||||| ||||||||||||||| ||||| |||  ||||      ||  ||||||||||||||||||||||||||||||    
T  37012754 tccttcctttcttctcttgtctgatttcaatcattcaagctccaaacatcttgt------aaagtcatctagctttaggggtactaaagtgtta 37012841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 486
Target Start/End: Original strand, 42034498 - 42034641
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    ||||||||||||||  ||||| |||| ||||| ||||||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||||  | |     
T  42034498 tttcaagtaaaagcttgtgggacccaggacacgtggcataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagagatcat 42034597  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | ||  ||||||||||||| ||| ||||||||||||||    
T  42034598 tgccttagcaaaacttgcaccattgtaaagcatacaagaaaaca 42034641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 2117459 - 2117520
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  2117459 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 2117520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 20315035 - 20315096
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  20315035 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 20315096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 394
Target Start/End: Original strand, 22956874 - 22956968
Alignment:
Q  300 aagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtc 394  Q
    ||||||| ||||||| || |||| |||||||||||||  | ||||||||||||||||  |||||| ||||||||||||||| || ||||||||||    
T  22956874 aagaacacaacaacactcagatggtcagaatgttcacctaaattttcaagtaaaagctggtggggtccatgacacatggcacaagaccattggtc 22956968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 27066684 - 27066745
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  27066684 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 27066745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 4950693 - 4950806
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaa 312  Q
    ||||||||||| |||||||||||||||||||||| |||| | |||||||| ||  |||     || ||||| ||||||||| |||||||||||| | |||    
T  4950693 cacgcattggacaaacccagaaactcatcatacattcatcattgatgaactcagatgaagaatatcatgaatatcaacattttgatgaagaacacatcaa 4950792  T
Q  313 cattctgatgttca 326  Q
    ||||||||||||||    
T  4950793 cattctgatgttca 4950806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 18096815 - 18096714
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    ||||| |||||||||||||||| |||| | |||||||| ||| |||    ||| ||||| ||||||||| |||||||||||| |||||||||||||||||    
T  18096815 aaaccgagaaactcatcatacattcatcattgatgaactcaaatgaagaacatcatgaatatcaacattttgatgaagaacacaacaacattctgatgtt 18096716  T
Q  325 ca 326  Q
    ||    
T  18096715 ca 18096714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 26193332 - 26193228
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaa 312  Q
    |||| |||||||  |||||||||||||||||||| |||| | |||||||||||          |||| |||||||||||||||||||||||||| |||||    
T  26193332 cacgtattggatggacccagaaactcatcatacattcatcattgatgaacccag---------atgaagaacatcaacattctgatgaagaacacaacaa 26193242  T
Q  313 cattctgatgttca 326  Q
    ||||||||||||||    
T  26193241 cattctgatgttca 26193228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 49333525 - 49333626
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    |||||||||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| ||||||||| |||||||||||| |||||||||||||||||    
T  49333525 aaacccagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaacattttgatgaagaacacaacaacattctgatgtt 49333624  T
Q  325 ca 326  Q
    ||    
T  49333625 ca 49333626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 312 - 436
Target Start/End: Original strand, 21793042 - 21793166
Alignment:
Q  312 acattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctaca 411  Q
    ||||||||||| || |||||||||| || |||||||||||||||| |||||||| || ||||| ||||| || ||||||||||| |||  |||| |||      
T  21793042 acattctgatggtccgaatgttcacccatattttcaagtaaaagctagtggggcacaggacacgtggcaaaataccattggtcaacctacaacgactatt 21793141  T
Q  412 agagcccaagaactctataaataga 436  Q
     ||||||||  | ||||||||||||    
T  21793142 tgagcccaaacattctataaataga 21793166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 607 - 687
Target Start/End: Original strand, 34823554 - 34823633
Alignment:
Q  607 ctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||| |||||||||| |||||||||| ||  |||||||  ||| ||||||||||||||||||||||||||||||||    
T  34823554 ctcttgtctgatttcaatcactcaaactcca-actcattgtaaagaaagtctcatctagctttaggggtactaaagtgtta 34823633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 42034818 - 42034879
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  42034818 cattcaacctccatacaaattgcaa-caaagtctcatctagctttaggggtactaaagtgtta 42034879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 553 - 637
Target Start/End: Complemental strand, 18058514 - 18058431
Alignment:
Q  553 agtgtaaatcaattctctcttatattgttaaagataatttctcccttcattcttctcttgtctcatttcaatcattcaaactcca 637  Q
    |||||||||||||||| |||||| ||||||||||||| |||| | | | || ||||||||||| |||| ||||||||||||||||    
T  18058514 agtgtaaatcaattctttcttatcttgttaaagataagttct-cttcctttattctcttgtctgattttaatcattcaaactcca 18058431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 26192742 - 26192661
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  26192742 ttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 26192661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 359 - 506
Target Start/End: Complemental strand, 19748298 - 19748152
Alignment:
Q  359 gtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattactt 458  Q
    ||||| |||| |||||||| |||||||||||||| ||||||  |||| ||| | ||||||||  ||||||||||||||  | |  | || |  |  ||||    
T  19748298 gtgggacccaagacacatgacataacaccattggacaccctacaacgactatatgagcccaaagactctataaatagagatcatggccttagaaaaactt 19748199  T
Q  459 gcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagct 506  Q
    ||||||||||||| |||||||||||||| ||| ||| |||||||||||    
T  19748198 gcaccattgcaaagcatacaagaaaacaactt-aaattgtttgaagct 19748152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 633 - 687
Target Start/End: Complemental strand, 30549074 - 30549021
Alignment:
Q  633 ctccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  30549074 ctccatacaaattgaaa-caaagtctcatctagctttaggggtactaaagtgtta 30549021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 217 - 326
Target Start/End: Original strand, 22961061 - 22961170
Alignment:
Q  217 cattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacatt 316  Q
    ||||||| ||| | ||||| |||||| ||| |||| | |||||||||||  |||    ||| ||||| |||||||||||||||||||||| |||||||||    
T  22961061 cattggacaaatctagaaaatcatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaacattctgatgaagaacacaacaacatt 22961160  T
Q  317 ctgatgttca 326  Q
     |||||||||    
T  22961161 atgatgttca 22961170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 25823333 - 25823232
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    ||||| |||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| |||||||||||||||||||| | ||||| |||||||||||    
T  25823333 aaacctagaaactcatcagacattcatcattgatgaacccatatgaagaacatcatgaatatcaacattctgatgaagaaaacaacaagattctgatgtt 25823234  T
Q  325 ca 326  Q
    ||    
T  25823233 ca 25823232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 41543483 - 41543401
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagcttt-aggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| ||||| |||  ||||    ||| |||||||||||||| ||||||||||||||||||    
T  41543483 ttcttctcttgtctgatttcaatcattcaagctccaaacatcttgt----aaagtctcatctagctttaaggggtactaaagtgtta 41543401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 19747958 - 19747877
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| |||| |||||||||| ||||| |||  ||||||    | ||||||||| ||||||||||||||||||||||    
T  19747958 ttcttctcttgtctgattttaatcattcaagctccaaacatcttgtaa----agtctcatctaactttaggggtactaaagtgtta 19747877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 687
Target Start/End: Original strand, 13965467 - 13965534
Alignment:
Q  620 tcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| |||||||||  | |||||||||||| || ||||||||||| |||||||||| |||||||||||    
T  13965467 tcaaacattcaaacctcttacaaattgtaaacataatctcatctaactttaggggttctaaagtgtta 13965534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 620 - 687
Target Start/End: Complemental strand, 18096382 - 18096316
Alignment:
Q  620 tcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| |||||||||| |  ||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  18096382 tcaaacattcaaacttctcacaaattgtaaacaaa-tctcatctagctttaggggtactatagtgtta 18096316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 20317921 - 20317822
Alignment:
Q  228 cccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa-cattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||| ||| ||||   ||||||||| |  ||| |  ||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  20317921 cccagaaactcatcagacattcatccttgatgaacctagatgaataacatcatgaatatcaaacattctgatgaagaacacaacaacattctgatgttca 20317822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 21821490 - 21821435
Alignment:
Q  61 aaatctcccaaaagcatggacctgaagatgcagaaccactattctctctcctgcac 116  Q
    |||||||| | |||||||| |||||||||||||  |||||||||||||||||||||    
T  21821490 aaatctcctataagcatgggcctgaagatgcaggtccactattctctctcctgcac 21821435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 20327603 - 20327569
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  20327603 aaatctcatctagctttaggggtactaaagtgtta 20327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 687
Target Start/End: Complemental strand, 21820946 - 21820859
Alignment:
Q  597 cttcattcttctcttgtctcatttcaatcattcaaactc-catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| |||||| || |||| ||||||||||||||||||| || |||||||||||    | ||||||||| | ||||||||||||||||||||    
T  21820946 cttctttcttccctggtctgatttcaatcattcaaactcacaaacaaattgtaa----agtctcatctaacattaggggtactaaagtgtta 21820859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 22961508 - 22961569
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| |  ||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  22961508 cattcaaacttctcacaaattgttatcaag-tctcatctagctttaggggtactaaagtgtta 22961569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 25038853 - 25038792
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| | |||||||||||| |||| ||||||||||||||| |||||||| |||||||    
T  25038853 cattcaaacttcttacaaattgtaaacaaa-tctcatctagctttacgggtactatagtgtta 25038792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 25039295 - 25039193
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataacaacattctgatgt 323  Q
    ||||||| |||||||||| ||| |||| | |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| | ||||||||||||||    
T  25039295 aaacccaaaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacagcaacattctgatgt 25039196  T
Q  324 tca 326  Q
    |||    
T  25039195 tca 25039193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 25044065 - 25044004
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| | |||||||||||| |||| ||||||||||||||| |||||||| |||||||    
T  25044065 cattcaaacttcttacaaattgtaaacaaa-tctcatctagctttacgggtactatagtgtta 25044004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 41543259 - 41543225
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  41543259 aaatctcatctagctttaggggtactaaagtgtta 41543225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 532
Target Start/End: Complemental strand, 41543590 - 41543556
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga 532  Q
    |||||||||||||||||||||||||||||||||||    
T  41543590 tttgaagctttagcatctgaattgatcatcactga 41543556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 343 - 532
Target Start/End: Complemental strand, 41543866 - 41543678
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    ||||||||||||||  ||||| |||| ||||||| |||||| |||||||| ||| ||  |||| ||| | ||||||||  ||||||||||||||  | ||    
T  41543866 tttcaagtaaaagcttgtgggacccaggacacattgcataataccattggacacactacaacgtctatatgagcccaaagactctataaatagagatcaa 41543767  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagc-atctgaattgatcatcactga 532  Q
     | || | ||  |||||||||||||| || |||| ||||||||| | | ||| |||||||||||   || || ||||||||||||||||||    
T  41543766 ggccttagcaaaacttgcaccattgc-aagcatataagaaaacaac-tgaaattgtttgaagctcctgcaatttgaattgatcatcactga 41543678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 30549362 - 30549269
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaataga 436  Q
    |||||||| |||||  ||||| || | ||||||||||||||||||||||| || |||  |||||||| | |||| |||  ||||||||||||||    
T  30549362 tttcaagttaaagcttgtgggacctaggacacatggcataacaccattggacatcctacaacggctatatgagctcaaagactctataaataga 30549269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 326
Target Start/End: Original strand, 27066270 - 27066370
Alignment:
Q  227 acccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataacaacattctgatgttc 325  Q
    |||||||||||||||  ||||||||   |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| | ||||||||||||||||    
T  27066270 acccagaaactcatctgacactcatccttgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacagcaacattctgatgttc 27066369  T
Q  326 a 326  Q
    |    
T  27066370 a 27066370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 4951064 - 4951095
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  4951064 tctcatctagctttaggggtactaaagtgtta 4951095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 20317206 - 20317175
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  20317206 tctcatctagctttaggggtactaaagtgtta 20317175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 20327688 - 20327657
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  20327688 tctcatctagctttaggggtactaaagtgtta 20327657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 25822591 - 25822560
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  25822591 tctcatctagctttaggggtactaaagtgtta 25822560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 26192604 - 26192573
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  26192604 tctcatctagctttaggggtactaaagtgtta 26192573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 41543344 - 41543313
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  41543344 tctcatctagctttaggggtactaaagtgtta 41543313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 20314674 - 20314712
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  20314674 aacattctgatgaagaacacaacaacattctaatgttca 20314712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 20317121 - 20317087
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||| |||||||||||||||||||||    
T  20317121 aaatctcatctagttttaggggtactaaagtgtta 20317087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 20328342 - 20328304
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  20328342 aacattctgatgaagaacacagcaacattctgatgttca 20328304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 25044499 - 25044405
Alignment:
Q  233 aaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataacaacattctgatgttca 326  Q
    |||||||||| ||| |||| | |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| | |||||||||||||||||    
T  25044499 aaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacagcaacattctgatgttca 25044405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 343 - 399
Target Start/End: Original strand, 8540576 - 8540632
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccct 399  Q
    ||||||||||||||  ||||| |||| |||||||| |||||||| ||||| ||||||    
T  8540576 tttcaagtaaaagcttgtgggacccaggacacatgacataacactattggacaccct 8540632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 343 - 399
Target Start/End: Original strand, 8605815 - 8605871
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccct 399  Q
    ||||||||||||||  ||||| |||| |||||||| |||||||| ||||| ||||||    
T  8605815 tttcaagtaaaagcttgtgggacccaggacacatgacataacactattggacaccct 8605871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 602 - 687
Target Start/End: Original strand, 49336245 - 49336326
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||| |||||||| || |||||||||||| || || ||| |||||||    | |||||||||| ||||||||||||||| |||||    
T  49336245 ttcttatcttgtctgatctcaatcattcaagcttcaaacatattgtaa----agtctcatctagttttaggggtactaaaatgtta 49336326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 2e-75; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 288 - 688
Target Start/End: Complemental strand, 10508473 - 10508067
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacacc 387  Q
    ||||||||||||||||||| ||||||||||||||| | | ||||||||| |||||||||||||| |||   |||| ||||| ||||||||||||||||||    
T  10508473 aacattctgatgaagaacacaacaacattctgatggtgaaaatgttcacccagattttcaagtataagtttgtggagcccaggacacatggcataacacc 10508374  T
Q  388 attggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacat 487  Q
    | ||||||||||  |||||||| | |||| ||| |||||||||||||||  | ||||||| | |||||||||||| |||||||| |||||||||||||||    
T  10508373 aatggtcaccctacaacggctatatgagctcaaaaactctataaatagagatcaaaggcttagcattacttgcactattgcaaagcatacaagaaaacat 10508274  T
Q  488 cttaaaagtgtttgaagctttagca--tctgaattgatcatcactgagatttccaactgtatctttaag---tgtaaatcaattc--tctcttatattgt 580  Q
    || ||| ||||||||||||||||||  | |||||||||||||| ||||||||  |  | | ||||  ||   |||||| ||||||  ||| |||| ||||    
T  10508273 ctaaaacgtgtttgaagctttagcatttttgaattgatcatcattgagatttttatatct-tcttgtagtactgtaaaccaattctttctattatcttgt 10508175  T
Q  581 taaagataatttctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaa 680  Q
    ||||||||| |||| | | | || | ||||||| |  |||||| |||||||||| ||||||||||||||||||| ||||||||| |||||||  ||||||    
T  10508174 taaagataacttcttcatcctttttcctcttgtttgttttcaaacattcaaacttcatacaaattgtaatcaaagtctcatctaactttaggcttactaa 10508075  T
Q  681 agtgttaa 688  Q
    ||||||||    
T  10508074 agtgttaa 10508067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 19828001 - 19827823
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||  |||||||||| ||||| ||||||||||||| |||||||| |  ||||||    
T  19828001 aacaacattctgatgttcagaatgtttacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccactggtcaccttacaacggc 19827902  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| |||||||  |||||||||||| ||||||||||||||    
T  19827901 tatatgagcccaaagactctataaatagagatcaaaggctcagcattactcacaccattgcaaagcatacaagaaaaca 19827823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 20744832 - 20744654
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||| ||||||||||||||||||||||| ||||||  ||||||    
T  20744832 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggtccaggacacatggcataacaccattggacaccctacaacggc 20744733  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | || | || |  |  ||||||||||||||||| ||||||||||||||    
T  20744732 tatatgagcccaaagactctataaatagagatcaaggccttagaaaaacttgcaccattgcaaagcatacaagaaaaca 20744654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 687
Target Start/End: Complemental strand, 49387132 - 49386779
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  49387132 cagaatttcaagttaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 49387033  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||||||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  49387032 atcaagacctcaacataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 49386933  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaac-t 634  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  ||||||||||| |    
T  49386932 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaaacct 49386833  T
Q  635 ccatacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  49386832 ccatacaaattgtaaagaaaagtctcatctagctttaggggtactaaagtgtta 49386779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 338 - 687
Target Start/End: Original strand, 24793752 - 24794102
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| |||||||  || |||||||||||  || |||||||||||||||||||     
T  24793752 cagaatttcaagtgaaagttggtgggtcccaggacacgtggcataagaccagtggtcactttccaacggctacaaaggctcaagaactctataaatagag 24793851  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | | |  |||| ||| ||   |||  ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  24793852 ataagac-ctcagcataacacacacatttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaacattgatcatcacaaagattc 24793950  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    | |   || |    |||||||||||||| | |||||||| || |||||||||| | ||||||| |||||||||||||||| || |  |||||||||||||    
T  24793951 caagaagtcttcaaaagtgtaaatcaatatttctcttatctttttaaagataaatctctccctccattcttctcttgtctgatctatatcattcaaactc 24794050  T
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| |||| | |||||||||||||| |||||||||||||||    
T  24794051 catacaaattgtaaacaaagtatcatctagctttagaggtactaaagtgtta 24794102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 423 - 687
Target Start/End: Original strand, 11459536 - 11459804
Alignment:
Q  423 actctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa-catcttaaaagtgtt-tgaagctttagcatctgaatt 520  Q
    |||||||||||||||||| ||| || ||||||||||||||||||| ||| || ||||||||| || | ||| | |||| ||||| |||||||    ||||    
T  11459536 actctataaatagaagtggaagacttaacattacttgcaccattgaaaagca-acaagaaaaacaacataataatgttgtgaagatttagcaaaa-aatt 11459633  T
Q  521 gatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagat-aatttctcccttca---ttcttctcttgtctc 616  Q
    |||||||||  ||||||| |   || | |  ||||||||||||||||||||||||  | |||||||| ||  ||||||| ||   ||||||||||||||     
T  11459634 gatcatcacaaagatttctagaagtctttaaaagtgtaaatcaattctctcttatcattttaaagataaacctctccctccattcttcttctcttgtctg 11459733  T
Q  617 atttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||| |||||||||||  ||| |||||| |||||||||||||||||||||||||    
T  11459734 atttcaatcattcaaactccaaacaaattgtaaagaaagtctcatatagctttaggggtactaaagtgtta 11459804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 10011990 - 10011806
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||| ||||||  | |||| |||||||| |||||  ||||| |||| |||||||||||| |||||||||| ||||||      
T  10011990 gaacacaacaacattctgatgttcataatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcattacaccattggacaccctac 10011891  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||| | ||||||||  ||||||||||||||  | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  10011890 aacggctatatgagcccaaagactctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 10011806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 225 - 486
Target Start/End: Complemental strand, 51978638 - 51978386
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    ||||||||||||| |||| ||| |||| | |||||||||||  |||    ||| ||||| ||||||||| |||||||||||| |||||||||||||||||    
T  51978638 aaacccagaaacttatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaacattttgatgaagaacacaacaacattctgatgtt 51978539  T
Q  325 cagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaac 424  Q
    ||         | |||||||||||||||||||  |||||||||| ||||| |||||||| |||||||| ||||||  |||| ||| | ||||||||  ||    
T  51978538 ca---------cccagattttcaagtaaaagcttgtggggcccaggacacgtggcataataccattggacaccctacaacgactatatgagcccaaagac 51978448  T
Q  425 tctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||  | |  | || | ||  ||||||| ||||||||| ||||||||||||||    
T  51978447 tctataaatagagattatggccttagcaaaacttgcatcattgcaaagcatacaagaaaaca 51978386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 338 - 687
Target Start/End: Complemental strand, 24872973 - 24872622
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| ||||  |||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  24872973 cagaatttcaagttaaagttggtgggtcccagaacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 24872874  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| |||      |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  24872873 atcaagacctcagcatacaaaacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 24872774  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    | |   || |    |||||||||||||| |||||| ||| || | ||||||||   ||  ||| |||||||||||||||| || |  ||||||||| |||    
T  24872773 caagaagtcttcaaaagtgtaaatcaatatctctcatatcttttcaaagataaaactcaacctccattcttctcttgtctgatctatatcattcaacctc 24872674  T
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  24872673 catacaaattgtaaagaaagtctcatctagctttaggggtactaaagtgtta 24872622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 568 - 687
Target Start/End: Original strand, 17734682 - 17734803
Alignment:
Q  568 tctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaa-tctcatctag 665  Q
    |||||||| || |||||||||| | |||  || |||||||||||||||| || | ||||||||| |||||||||||| ||||||||||| |||||| |||    
T  17734682 tctcttatctttttaaagataaatctctttctccattcttctcttgtctgatctaaatcattcatactccatacaaactgtaatcaaaagtctcatatag 17734781  T
Q  666 ctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||    
T  17734782 ctttaggggtactaaagtgtta 17734803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 568 - 687
Target Start/End: Original strand, 19035951 - 19036072
Alignment:
Q  568 tctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaa-tctcatctag 665  Q
    |||||||| || |||||||||| | |||  || |||||||||||||||| || | ||||||||| |||||||||||| ||||||||||| |||||| |||    
T  19035951 tctcttatctttttaaagataaatctctttctccattcttctcttgtctgatctaaatcattcatactccatacaaactgtaatcaaaagtctcatatag 19036050  T
Q  666 ctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||    
T  19036051 ctttaggggtactaaagtgtta 19036072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 343 - 486
Target Start/End: Complemental strand, 13119356 - 13119213
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||||  | ||    
T  13119356 tttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagagatcaa 13119257  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | ||  ||||||||||||||||| ||||||||||||||    
T  13119256 ggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 13119213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 5655387 - 5655225
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  5655387 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 5655288  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  5655287 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 5655225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 8973153 - 8973315
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  8973153 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 8973252  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  8973253 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 8973315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 8983708 - 8983870
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  8983708 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 8983807  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  8983808 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 8983870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 9537442 - 9537554
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  9537442 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 9537541  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  9537542 ctctataaataga 9537554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 9547768 - 9547880
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  9547768 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 9547867  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  9547868 ctctataaataga 9547880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 324 - 484
Target Start/End: Original strand, 25433142 - 25433302
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||| ||| | ||||||||  |    
T  25433142 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacgtctatatgagcccaaaga 25433241  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa 484  Q
    |||||||||||||  | || | || | ||  ||||||||||||||||| ||||||||||||    
T  25433242 ctctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaa 25433302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 1685012 - 1684850
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  1685012 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 1684913  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  1684912 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 1684850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 4371662 - 4371824
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  4371662 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 4371761  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  4371762 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 4371824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 4381403 - 4381565
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  4381403 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 4381502  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  4381503 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 4381565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 4782378 - 4782216
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  4782378 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 4782279  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  4782278 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 4782216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 303 - 397
Target Start/End: Original strand, 12376840 - 12376934
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcacc 397  Q
    |||| ||||||||||||||| ||||||||||||  |||||||| |||||||||   |||||||||| ||||  ||||||||||||||||||||||    
T  12376840 aacacaacaacattctgatggtcagaatgttcatccagattttaaagtaaaaggttgtggggcccaggacatgtggcataacaccattggtcacc 12376934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 16335174 - 16335012
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  16335174 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 16335075  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  16335074 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 16335012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 324 - 493
Target Start/End: Complemental strand, 4023892 - 4023723
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||||||||||||||  ||||| || | ||||||||||||||||||||||| |||| |  |||||||| | ||||||||  |    
T  4023892 tcagaatgtttgcccagaatttcaagtaaaagcttgtgggacctaggacacatggcataacaccattggacaccttacaacggctatatgagcccaaaga 4023793  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaa 493  Q
    |||||||||||||  | || | |||| ||  || |||| ||||||||| |||||||||||| | ||||||    
T  4023792 ctctataaatagagatcaaggcctcagcaaaacctgcatcattgcaaagcatacaagaaaataacttaaa 4023723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 486
Target Start/End: Complemental strand, 11728 - 11585
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||||  | ||    
T  11728 tttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagagatcaa 11629  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
        | | ||  ||||||||||||||||| ||||||||||||||    
T  11628 gacattagcaaaacttgcaccattgcaaagcatacaagaaaaca 11585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 486
Target Start/End: Complemental strand, 2488968 - 2488825
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    |||||||| |||||  ||||| |||| |||||||| |||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||||  | ||    
T  2488968 tttcaagttaaagcttgtgggacccaggacacatgacataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagagatcaa 2488869  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | ||  |||| |||||||||||| ||||||||||||||    
T  2488868 ggtcttagcaaaacttacaccattgcaaagcatacaagaaaaca 2488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 620 - 687
Target Start/End: Original strand, 12386831 - 12386898
Alignment:
Q  620 tcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| |||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12386831 tcaaacattcacacttcttacaaattgtaatcaaagtctcatctagctttaggggtactaaagtgtta 12386898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 302 - 373
Target Start/End: Original strand, 20293321 - 20293392
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgaca 373  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  20293321 gaacaaaacaacattccgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggaca 20293392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 11448 - 11387
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  11448 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 11387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 6433035 - 6433197
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||  ||  |||||||| | ||||||||  |    
T  6433035 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacattctacaacggctatatgagcccaaaga 6433134  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  6433135 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 6433197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 19827691 - 19827629
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  19827691 cattcaacctccatacaaattgtaaacaaagtctcatctaactttaggggtactaaagtgtta 19827629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 12376719 - 12376832
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaa 312  Q
    ||||||||| | |||||||||||||||||| ||| |||| | |||| ||||||| |||    ||| ||||| |||| ||||||||||||||||| | |||    
T  12376719 cacgcattgaacaaacccagaaactcatcagacattcatcattgattaacccaaatgaagaacatcatgaatatcagcattctgatgaagaacacagcaa 12376818  T
Q  313 cattctgatgttca 326  Q
    ||||||||||||||    
T  12376819 cattctgatgttca 12376832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 6422608 - 6422770
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| |||||||| ||||||||||| || || |||  |||||||| | ||||||||  |    
T  6422608 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatgacataacaccatgggacatcctacaacggctatatgagcccaaaga 6422707  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  6422708 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 6422770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 687
Target Start/End: Original strand, 25433497 - 25433686
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactg-agatt-tccaactgtatctttaagtgtaaatcaattc--tctcttatattgttaaagataatttc 593  Q
    |||||||||||||||||||||||||||||||||| ||||| |  ||     ||||  |||||||||||||||  ||| |||| |  ||||||||||        
T  25433497 tttgaagctttagcatctgaattgatcatcactgaagattctttaatatcttcttgtagtgtaaatcaattctttctattatctctttaaagataacact 25433596  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||| | | |||||||||||||| ||||||||||||||| || || |||  ||||    ||| ||||||||||||||||||||||||||||||||    
T  25433597 tccttcctttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgt----aaagtctcatctagctttaggggtactaaagtgtta 25433686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 2488529 - 2488448
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  2488529 ttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 2488448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 4782102 - 4782021
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  4782102 ttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 4782021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 486
Target Start/End: Original strand, 20492376 - 20492492
Alignment:
Q  370 gacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgca 469  Q
    ||||||||||||||||||||||| ||||||  |||||||| | ||||| ||  ||||||||||||||  | |  | || | ||  |||||||||||||||    
T  20492376 gacacatggcataacaccattggacaccctacaacggctatatgagccaaaagactctataaatagagatcatggtcttagcaaaacttgcaccattgca 20492475  T
Q  470 aaacatacaagaaaaca 486  Q
    || ||||||||||||||    
T  20492476 aagcatacaagaaaaca 20492492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 20744364 - 20744283
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  20744364 ttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 20744283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 620 - 687
Target Start/End: Complemental strand, 4023593 - 4023526
Alignment:
Q  620 tcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| |||||||||  | |||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  4023593 tcaaacattcaaacctcttacaaattgtaaacataatctcatctaactttaggggtactaaagtgtta 4023526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 687
Target Start/End: Complemental strand, 10011657 - 10011607
Alignment:
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  10011657 catacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 10011607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 621 - 687
Target Start/End: Complemental strand, 14801892 - 14801827
Alignment:
Q  621 caatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| |  ||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  14801892 caatcattcaaacttctcacaaattataatcaac-tctcatctagctttaggggtactaaagtgtta 14801827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 638 - 687
Target Start/End: Original strand, 20492647 - 20492696
Alignment:
Q  638 tacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  20492647 tacaaattgtaaacagaatctcatctaactttaggggtactaaagtgtta 20492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 13119098 - 13119017
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| | ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  13119098 ttcttctcttgtatgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 13119017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 51978141 - 51978060
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||| | ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  51978141 ttcttctcttgtttgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 51978060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 625 - 688
Target Start/End: Original strand, 20293650 - 20293712
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgttaa 688  Q
    ||||||||||||  |||||||||||||||  ||||||||||||| |||||||||||||| ||||    
T  20293650 cattcaaactcctcacaaattgtaatcaag-tctcatctagcttcaggggtactaaagtattaa 20293712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 2488306 - 2488272
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  2488306 aaatctcatctagctttaggggtactaaagtgtta 2488272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 532
Target Start/End: Complemental strand, 2488637 - 2488603
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga 532  Q
    |||||||||||||||||||||||||||||||||||    
T  2488637 tttgaagctttagcatctgaattgatcatcactga 2488603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 4372171 - 4372205
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  4372171 aaatctcatctagctttaggggtactaaagtgtta 4372205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 4381912 - 4381946
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  4381912 aaatctcatctagctttaggggtactaaagtgtta 4381946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 4781879 - 4781845
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  4781879 aaatctcatctagctttaggggtactaaagtgtta 4781845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 20744141 - 20744107
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  20744141 aaatctcatctagctttaggggtactaaagtgtta 20744107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 2488391 - 2488360
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  2488391 tctcatctagctttaggggtactaaagtgtta 2488360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 13118960 - 13118929
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  13118960 tctcatctagctttaggggtactaaagtgtta 13118929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 20744226 - 20744195
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  20744226 tctcatctagctttaggggtactaaagtgtta 20744195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 25433743 - 25433774
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  25433743 tctcatctagctttaggggtactaaagtgtta 25433774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 51977915 - 51977884
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  51977915 tctcatctagctttaggggtactaaagtgtta 51977884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 51978003 - 51977972
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  51978003 tctcatctagctttaggggtactaaagtgtta 51977972  T

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Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 13118875 - 13118841
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||| |||||||||||||||||||||    
T  13118875 aaatctcatctagttttaggggtactaaagtgtta 13118841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 19828052 - 19828014
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  19828052 aacattctgatgaagaacacatcaacattctgatgttca 19828014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 20293276 - 20293314
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  20293276 aacattctgatgaagaacacatcaacattctgatgttca 20293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 20293036 - 20293096
Alignment:
Q  59 gcaaatctcccaaaagcatggacctgaagatgcagaaccactat--tctctctcctgcaca 117  Q
    ||||||||||   |||||||| |||||||||||||| |||||||  |||||||||||||||    
T  20293036 gcaaatctccttgaagcatgggcctgaagatgcagatccactatcctctctctcctgcaca 20293096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 2489621 - 2489562
Alignment:
Q  59 gcaaatctcccaaaagcatggacctgaagatgcagaaccactat--tctctctcctgcac 116  Q
    ||||||||||   |||||||| |||||||||||||| |||||||  ||||||||||||||    
T  2489621 gcaaatctccttgaagcatgggcctgaagatgcagatccactatcctctctctcctgcac 2489562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 135; Significance: 5e-70; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 303 - 687
Target Start/End: Original strand, 15732 - 16106
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctcta 402  Q
    |||| |||||||||||| || ||||||||||||| ||||||||||||| ||||| |||||| |||| || |||||||| || ||||||| ||||||||||    
T  15732 aacacaacaacattctggtgatcagaatgttcacccagattttcaagtcaaagctagtgggacccaggaaacatggcacaagaccattgttcaccctcta 15831  T
Q  403 acggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtt-tg 501  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||||||||| || |||||  |||||        |||| ||    
T  15832 acggttacaagagccgaagaactctataaatagaagtgaaagactcagcattactcgcaccattgcaaagca-acaag--aacat--------tgttgtg 15920  T
Q  502 aagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagat-aatttctcccttc 600  Q
    || ||| |||||   |||||||||||| ||||||||| || ||| |||| |||||||||||||||||||||||| ||| ||||||| || ||| |||| |    
T  15921 aatcttaagcattaaaattgatcatcattgagatttcaaattgtctcttaaagtgtaaatcaattctctcttatcttgctaaagataaacttccccctcc 16020  T
Q  601 attc---ttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||   ||||||||||| |||| |||||||||||||||| |||||||||    ||| |||||||||| |||||| |||| |||||||||    
T  16021 attctttttctcttgtctgattttaatcattcaaactccaaacaaattgt----aaagtctcatctagatttaggagtaccaaagtgtta 16106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 5e-70; HSPs: 83)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 303 - 687
Target Start/End: Complemental strand, 23376733 - 23376359
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctcta 402  Q
    |||| |||||||||||| || ||||||||||||| ||||||||||||| ||||| |||||| |||| || |||||||| || ||||||| ||||||||||    
T  23376733 aacacaacaacattctggtgatcagaatgttcacccagattttcaagtcaaagctagtgggacccaggaaacatggcacaagaccattgttcaccctcta 23376634  T
Q  403 acggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtt-tg 501  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||||||||| || |||||  |||||        |||| ||    
T  23376633 acggttacaagagccgaagaactctataaatagaagtgaaagactcagcattactcgcaccattgcaaagca-acaag--aacat--------tgttgtg 23376545  T
Q  502 aagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagat-aatttctcccttc 600  Q
    || ||| |||||   |||||||||||| ||||||||| || ||| |||| |||||||||||||||||||||||| ||| ||||||| || ||| |||| |    
T  23376544 aatcttaagcattaaaattgatcatcattgagatttcaaattgtctcttaaagtgtaaatcaattctctcttatcttgctaaagataaacttccccctcc 23376445  T
Q  601 attc---ttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||   ||||||||||| |||| |||||||||||||||| |||||||||    ||| |||||||||| |||||| |||| |||||||||    
T  23376444 attctttttctcttgtctgattttaatcattcaaactccaaacaaattgt----aaagtctcatctagatttaggagtaccaaagtgtta 23376359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 22173214 - 22173036
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  22173214 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaagacacgtggcataacaccattggtcaccttacaacggc 22173115  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  22173114 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 22173036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 27274143 - 27273965
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  27274143 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 27274044  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  27274043 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 27273965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 13571642 - 13571464
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  13571642 aacaacattctgatgttcagaatgtttacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 13571543  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  13571542 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 13571464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 308 - 506
Target Start/End: Original strand, 31917106 - 31917304
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||| ||||| |||||||||||||||||||||| |  ||||||    
T  31917106 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtgaggcccaggacacgtggcataacaccattggtcaccttacaacggc 31917205  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagct 506  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| |||||||||||||| ||| |   |||||||||||    
T  31917206 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaacaacttgattttgtttgaagct 31917304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 37298776 - 37298598
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  37298776 aacaacattatgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 37298677  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | |||||||| |||||||||||||||  | ||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  37298676 tatatgagcccaaaaactctataaatagagatcaaaggctcagcattactagcaccattgcaaagcatacaagaaaaca 37298598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 308 - 486
Target Start/End: Original strand, 37817892 - 37818070
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  37817892 aacaacattctgatgttcagaatgtttacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 37817991  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  37817992 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 37818070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 42090486 - 42090302
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| | |||||| |||||||| |||||||||| |      
T  42090486 gaacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccagggcacatgtcataacacaattggtcaccttac 42090387  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||  ||| | |||||||| |||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  42090386 aacaactatatgagcccaaaaactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaaca 42090302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 25 - 326
Target Start/End: Complemental strand, 21484085 - 21483782
Alignment:
Q  25 gacacgtatgagatttggtactctacaataccatgcaaatctcccaaaagcatggacctgaagatgcagaaccactattctctctcctgcacacaatccg 124  Q
    ||||| |||||||||||||||| ||||||| || |||||||||  | |||||||  |||| || | || | |||||| |||| ||| ||||||||||||     
T  21484085 gacacatatgagatttggtactgtacaatatcaggcaaatctcatagaagcatgagcctgtagctacatatccactactctccctcttgcacacaatcca 21483986  T
Q  125 atgcatatttggaaaaagtttatgt-tgcaactttc-tgatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatcataaggcacgcattgg 222  Q
    ||||| |||||||| || |||||   || ||| ||| |||||||||||  ||||  ||||||||||||||| || || ||| | ||||||||| ||||||    
T  21483985 atgcagatttggaacaactttatccatgtaacattcctgatgtttgtgccaaagttacaacacatgaataaagctcaaaaagttataaggcacacattgg 21483886  T
Q  223 ataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatg 322  Q
    |||||||||||||||||||||||| |||||||| ||||||| |  |||   |||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  21483885 ataaacccagaaactcatcatacattcataaataatgaacctagatgaagatcataatgaacatcaacattttgatgaagaacacaacaacattctgatg 21483786  T
Q  323 ttca 326  Q
    ||||    
T  21483785 ttca 21483782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 4037941 - 4037763
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  4037941 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 4037842  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | |||||||||  ||||||||||| |||||||| ||||||||||||||    
T  4037841 tatatgagcccaaagactctataaatagagatcaaaggctcagaattacttgcacaattgcaaagcatacaagaaaaca 4037763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 34130451 - 34130273
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||| ||||| |  |||| |    
T  34130451 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattgatcaccttacaacgac 34130352  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||||||||||||||| |||||||||  |||||||||||||    
T  34130351 tatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcatcattgcaaagtatacaagaaaaca 34130273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 302 - 528
Target Start/End: Original strand, 20764642 - 20764868
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||| |||| ||||| |||||||||||||||| ||||| |      
T  20764642 gaacacaacaacattatgatgttcagaaagttcacccagattttcaagtaaaagcttgtgggacccaggacacgtggcataacaccattgatcaccttac 20764741  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttg 501  Q
    || | ||| | |||||||| |||||||||||||||  | ||||||||| ||||||||||||||||||||| |||||||||||||| | | ||| ||||||    
T  20764742 aatgactatatgagcccaaaaactctataaatagagatcaaaggctcatcattacttgcaccattgcaaagcatacaagaaaacaacat-aaattgtttg 20764840  T
Q  502 aagctttagc-atctgaattgatcatca 528  Q
    ||||| | || || ||||||||||||||    
T  20764841 aagctcttgcaatttgaattgatcatca 20764868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 338 - 687
Target Start/End: Original strand, 20948165 - 20948516
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| ||||  |||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  20948165 cagaatttcaagttaaagttggtgggtcccagaacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 20948264  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| |||    | |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  20948265 atcaagacctcagcatacaatacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 20948364  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  ||||||||| |||    
T  20948365 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttaaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaacctc 20948464  T
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  20948465 catacaaattgtaaagaaagtctcatctagctttaggggtactaaagtgtta 20948516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 338 - 687
Target Start/End: Original strand, 20958534 - 20958885
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| ||||  |||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||     
T  20958534 cagaatttcaagttaaagttggtgggtcccagaacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagag 20958633  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| |||    | |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  20958634 atcaagacctcagcatacaatacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 20958733  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactc 635  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| | ||  ||| |||||||||||||||| || |  ||||||||| |||    
T  20958734 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttaaaagataaatctcaacctccattcttctcttgtctgatctatatcattcaacctc 20958833  T
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  20958834 catacaaattgtaaagaaagtctcatctagctttaggggtactaaagtgtta 20958885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 303 - 479
Target Start/End: Complemental strand, 205446 - 205270
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctcta 402  Q
    |||| ||||||||| ||||| |||||||||||||  ||||||||||||||||||  |||||||||| ||||| ||||||||||||||||| |||| |  |    
T  205446 aacacaacaacattatgatggtcagaatgttcacctagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattgggcaccttaca 205347  T
Q  403 acggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaa 479  Q
    |||| || | |||||||| |||||||||||||||  | || | || | ||  ||||||||||||||||| |||||||    
T  205346 acggttatatgagcccaaaaactctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaa 205270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 302 - 479
Target Start/End: Original strand, 19780872 - 19781049
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| ||| ||| ||||| |||||||||||||||||||  |||||||||| |||||||| |||||||||||||  |||| |      
T  19780872 gaacacaacaacattctgatggtcaaaatattcacccagattttcaagtaaaagcttgtggggcccaggacacatgacataacaccattgagcaccttac 19780971  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaa 479  Q
    |||||||| | ||||||||  ||||||||||||||  | || | || | ||  ||||||||||||||||| |||||||    
T  19780972 aacggctatatgagcccaaagactctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaa 19781049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 32070747 - 32070909
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  32070747 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 32070846  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  32070847 ctctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 32070909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 326
Target Start/End: Original strand, 20897094 - 20897230
Alignment:
Q  190 ataatgcccagaaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa 289  Q
    |||| ||| ||||||||||| ||||||||||| | ||| |||||||||||||||||| |||| || ||||||||||  ||| |  ||| || |||||||     
T  20897094 ataaagcctagaaaatcatatggcacgcattgaacaaatccagaaactcatcatacattcatcaaagatgaacccagatgaataacatcataaacatcat 20897193  T
Q  290 cattctgatgaagaacataacaacattctgatgttca 326  Q
    |||||| |||||||||| ||||||||||| |||||||    
T  20897194 cattcttatgaagaacacaacaacattctaatgttca 20897230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 311 - 482
Target Start/End: Complemental strand, 20904493 - 20904323
Alignment:
Q  311 aacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctac 410  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| || |  ||||| || |||||||||||||||  ||||| ||     
T  20904493 aacattctgatggtcagaatgttcacccagattttcaagtaaaagctagtggggcccaggata-gtggcaaaagaccattggtcaccctacaacggttat 20904395  T
Q  411 aagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaa 482  Q
    | ||||||||  | || |||||||||  | || | |||| ||| ||||||||| || |||| ||||||||||    
T  20904394 atgagcccaaacattcgataaatagagatcaaggcctcatcataacttgcacctttacaaagcatacaagaa 20904323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 26191777 - 26191615
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  26191777 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 26191678  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  26191677 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 26191615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 26202359 - 26202197
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||| |    
T  26202359 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaagga 26202260  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  26202259 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 26202197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 687
Target Start/End: Original strand, 36316693 - 36317023
Alignment:
Q  359 gtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattactt 458  Q
    ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||  | ||   |||| ||| ||      
T  36316693 gtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaatagagatcaagacctcagcataacac 36316792  T
Q  459 gcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgta 558  Q
     |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  ||||| | |   || |    |||||||    
T  36316793 acacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattccaagaagtcttcaaaagtgta 36316892  T
Q  559 aatcaat-tctctcttatattgttaaagat-aatttctcccttcattcttc-tct--tgtctcatt-tcaatcattcaaactccatacaaattgtaatca 652  Q
    ||||||| |||||||||| || |||||||| || |||||||| |||||||| |||  ||| |  || |||| ||||||||||||| |||  ||||    |    
T  36316893 aatcaatatctctcttatctttttaaagataaacttctccctccattcttcttcttctgtttgtttctcaaacattcaaactccaaacatcttgt----a 36316988  T
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    || ||||||||||||||||||||||||||||||||    
T  36316989 aagtctcatctagctttaggggtactaaagtgtta 36317023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 552 - 687
Target Start/End: Complemental strand, 19547977 - 19547840
Alignment:
Q  552 aagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaa 649  Q
    |||||| ||||||| | |||||||| || |||||||||| | ||||||| ||| | |||||| ||| || |  |||||||||||||||||  ||||||||    
T  19547977 aagtgtgaatcaatatttctcttatctttttaaagataaatctctccctccatccctctcttctctgatctatatcattcaaactccatattaattgtaa 19547878  T
Q  650 tcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
     |||| ||||||||||||||||||||||||||||||||    
T  19547877 acaaagtctcatctagctttaggggtactaaagtgtta 19547840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 348 - 493
Target Start/End: Complemental strand, 27580181 - 27580036
Alignment:
Q  348 agtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggct 447  Q
    |||||||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||||  ||||   ||    
T  27580181 agtaaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaatgactctataaatagagatgaagacct 27580082  T
Q  448 caacattacttgcaccattgcaaaacatacaagaaaacatcttaaa 493  Q
     | ||  |||| ||| ||||||||||||||||||||||| ||||||    
T  27580081 tagcaaaacttccactattgcaaaacatacaagaaaacaacttaaa 27580036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 8765119 - 8764957
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  8765119 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 8765020  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  8765019 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 8764957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 13571332 - 13571270
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13571332 cattcaacctccatacaaattgtaaacaaagtctcatctagctttaggggtactaaagtgtta 13571270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 506
Target Start/End: Original strand, 21682305 - 21682487
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  21682305 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 21682404  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagct 506  Q
    ||||||||||||| |     |  | | ||  |||||||||||||||||||||||||||||||| ||| |   |||||||||||    
T  21682405 ctctataaatagaggacttggcattagcaaaacttgcaccattgcaaaacatacaagaaaacaacttgattttgtttgaagct 21682487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 21753750 - 21753912
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  21753750 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 21753849  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  21753850 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 21753912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Original strand, 21763037 - 21763199
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  21763037 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 21763136  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  21763137 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 21763199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 30943413 - 30943251
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  30943413 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 30943314  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  30943313 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 30943251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 30952835 - 30952673
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  30952835 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 30952736  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  30952735 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 30952673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Complemental strand, 18209403 - 18209291
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  18209403 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 18209304  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  18209303 ctctataaataga 18209291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Complemental strand, 18218741 - 18218629
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  18218741 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 18218642  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  18218641 ctctataaataga 18218629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 18361584 - 18361696
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  18361584 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 18361683  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  18361684 ctctataaataga 18361696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 18390541 - 18390653
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  18390541 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 18390640  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  18390641 ctctataaataga 18390653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 33939624 - 33939736
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  33939624 tcagaatgtttgcccagaatttcaagttaaagcgtgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 33939723  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  33939724 ctctataaataga 33939736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 33950024 - 33950136
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  33950024 tcagaatgtttgcccagaatttcaagttaaagcgtgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 33950123  T
Q  424 ctctataaataga 436  Q
    |||||||||||||    
T  33950124 ctctataaataga 33950136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 486
Target Start/End: Complemental strand, 11410844 - 11410701
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |||||||||||||| |        
T  11410844 tttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaagactctataaatagagggctt 11410745  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | ||  ||||||||||||||||| ||||||||||||||    
T  11410744 ggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 11410701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 486
Target Start/End: Original strand, 27412474 - 27412617
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaa 442  Q
    |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  ||||||||||||||  | ||    
T  27412474 tttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaagactctataaatagagatcaa 27412573  T
Q  443 aggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     |  | | ||  ||||||||||||||||| ||||||||||||||    
T  27412574 ggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 27412617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 4037631 - 4037570
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  4037631 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 4037570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 19887985 - 19887823
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||| ||||  |    
T  19887985 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagtccaaaga 19887886  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  19887885 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 19887823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 31917416 - 31917477
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  31917416 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 31917477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 37298466 - 37298405
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  37298466 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 37298405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 37818202 - 37818264
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  37818202 cattcaacctccatacaaattgtaaacaaagtctcatctagctttaggcgtactaaagtgtta 37818264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 687
Target Start/End: Complemental strand, 18209045 - 18208852
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga-gatttccaactgtat-ctttaagtgtaaatcaattctctct--tatattgttaaagataatttc 593  Q
    ||||||||||||||||||||||||||||||||||| ||||    | | | | |||  |||||||||||||||| |||  ||| |  ||||||||||        
T  18209045 tttgaagctttagcatctgaattgatcatcactgaagattctttaatatcttcttgtagtgtaaatcaattctttctgttatctctttaaagataacact 18208946  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagc-tttaggggtactaaagtgtta 687  Q
    ||| | | |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||| | ||||| ||| |||||||||||    
T  18208945 tccttcctttcttctcttgtctgatttcattcattcaagctccatacaaattgtaa-caaagtctcatctaacttttagaggtcctaaagtgtta 18208852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 498 - 687
Target Start/End: Complemental strand, 18218383 - 18218190
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga-gatttccaactgtat-ctttaagtgtaaatcaattctctct--tatattgttaaagataatttc 593  Q
    ||||||||||||||||||||||||||||||||||| ||||    | | | | |||  |||||||||||||||| |||  ||| |  ||||||||||        
T  18218383 tttgaagctttagcatctgaattgatcatcactgaagattctttaatatcttcttgtagtgtaaatcaattctttctgttatctctttaaagataacact 18218284  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagc-tttaggggtactaaagtgtta 687  Q
    ||| | | |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||| | ||||| ||| |||||||||||    
T  18218283 tccttcctttcttctcttgtctgatttcattcattcaagctccatacaaattgtaa-caaagtctcatctaacttttagaggtcctaaagtgtta 18218190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 200 - 326
Target Start/End: Complemental strand, 20904636 - 20904510
Alignment:
Q  200 gaaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatg 299  Q
    |||||||||| ||||| ||||| | ||||||||||| |||||||||| |||| ||||||||||| |  |||    ||| |  || || ||| ||||||||    
T  20904636 gaaaatcatatggcacacattgaacaaacccagaaattcatcatacattcatcaatgatgaacctagatgaaaaacatcaaaaaaattaacgttctgatg 20904537  T
Q  300 aagaacataacaacattctgatgttca 326  Q
    ||||||| |||||||||||||||||||    
T  20904536 aagaacacaacaacattctgatgttca 20904510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 22172904 - 22172843
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  22172904 cattcaacctccatacaaattgtaa-caaagcctcatctagctttaggggtactaaagtgtta 22172843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 37538522 - 37538360
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| || | ||||||||||||||||||||||  || |||  |||||||| | ||||||||  |    
T  37538522 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacctaggacacatggcataacaccattgaacatcctacaacggctatatgagcccaaaga 37538423  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  37538422 ctctataaatagagatcaaggaattagcaaaacttgcaccattgcaaagcatacaagaaaaca 37538360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 205555 - 205454
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    ||||| |||||||||| | ||| |||| | |||||||||||| |||    ||| ||||| |||||||||||||||||||||| |||||||||||| ||||    
T  205555 aaacctagaaactcataagacattcatcattgatgaacccaaatgaagaacatcatgaatatcaacattctgatgaagaacacaacaacattctggtgtt 205456  T
Q  325 ca 326  Q
    ||    
T  205455 ca 205454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 436
Target Start/End: Original strand, 20897239 - 20897372
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctcta 402  Q
    |||| |||||||||||||||  | |||||||||| || |||||||||||||| | ||||||||||| ||||  ||||| || |||||||| || |||  |    
T  20897239 aacacaacaacattctgatgaaccgaatgttcacccatattttcaagtaaaatctagtggggcccaggacatgtggcaaaagaccattggccaacctaca 20897338  T
Q  403 acggctacaagagcccaagaactctataaataga 436  Q
    |||||||   ||||||||  | ||||||||||||    
T  20897339 acggctatttgagcccaaacattctataaataga 20897372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 498 - 669
Target Start/End: Original strand, 21682660 - 21682834
Alignment:
Q  498 tttgaagctttagcatctgaattgatcatcactga-gatttccaactgtat-ctttaagtgtaaatcaattctctct--tatattgttaaagataatttc 593  Q
    ||||||||||||||||||||||||||||||||||| ||||    | | | | |||  |||||||||||||||| |||  ||| |  ||||||||||        
T  21682660 tttgaagctttagcatctgaattgatcatcactgaagattctttaatatcttcttgtagtgtaaatcaattctttctgttatctctttaaagataacact 21682759  T
Q  594 tcccttcattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagcttt 669  Q
    ||| | | |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||| ||||    
T  21682760 tccttcctttcttctcttgtctgatttcattcattcaagctccatacaaattgtaa-caaagtctcatctaacttt 21682834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 37538069 - 37537988
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  37538069 ttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 37537988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 37647180 - 37647099
Alignment:
Q  602 ttcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| ||||||||||||||| || || |||  ||||||    | ||||||||||||||||||||||||||||||||    
T  37647180 ttcttctcttgtctgatttcaatcattcaagcttcaaacatcttgtaa----agtctcatctagctttaggggtactaaagtgtta 37647099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 205118 - 205057
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| |  |||||||||||||||  ||||||||||||||||||||||||||||||||    
T  205118 cattcaaacttctcacaaattgtaatcaag-tctcatctagctttaggggtactaaagtgtta 205057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 20807841 - 20807902
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| |  |||||||||||||||  ||||||||||||||||||||||||||||||||    
T  20807841 cattcaaacttctcacaaattgtaatcaag-tctcatctagctttaggggtactaaagtgtta 20807902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 687
Target Start/End: Complemental strand, 20904201 - 20904114
Alignment:
Q  597 cttcattcttctcttgtctcatttcaatcattcaaactc-catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| |||||| ||||||| |||||||||||| |||||| || |||||||||||    | ||||||||||| ||||||||||||||||||||    
T  20904201 cttctttcttcccttgtctgatttcaatcatttaaactcacaaacaaattgtaa----agtctcatctagcattaggggtactaaagtgtta 20904114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 27273833 - 27273772
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| |||||||||||||||||  ||| |||||||||||||||||| |||||||||||||    
T  27273833 cattcaacctccatacaaattgtaaa-aaagtctcatctagctttagggatactaaagtgtta 27273772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 34130141 - 34130080
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| |||| |||||||||||| ||||||||||||||    
T  34130141 cattcaacctccatacaaattgtaa-caaagtctcctctagctttaggagtactaaagtgtta 34130080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 37647633 - 37647471
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| || |  |||||||||||||||||||||| || |||  ||||| || | ||||||||  |    
T  37647633 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacctagaacacatggcataacaccattggacatcctacaacggttatatgagcccaaaga 37647534  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  37647533 ctctataaatagagatcaaggaattagcaaaacttgcaccattgcaaagcatacaagaaaaca 37647471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 279 - 326
Target Start/End: Original strand, 19780818 - 19780865
Alignment:
Q  279 atgaacatcaacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||| |||||||||||||||||||||| | |||||||||||||||||    
T  19780818 atgaatatcaacattctgatgaagaacacagcaacattctgatgttca 19780865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 34130563 - 34130464
Alignment:
Q  228 cccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||| ||| ||||   |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  34130563 cccagaaactcatcagacattcatccttgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacaacaacattctgatgttca 34130464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 19887313 - 19887279
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  19887313 aaatctcatctagctttaggggtactaaagtgtta 19887279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 687
Target Start/End: Original strand, 20897486 - 20897619
Alignment:
Q  552 aagtgtaaatcaattctctcttatattg--ttaaagataatttctcccttcattcttctcttgtctcatttcaatcattcaaactc-catacaaattgta 648  Q
    ||||||| |||||||||||||||| ||   | ||||||||  | ||||||| |||||| ||| ||| |||||||||||||||| || || ||||||||||    
T  20897486 aagtgtatatcaattctctcttatctttcataaaagataaact-tcccttctttcttcccttatctgatttcaatcattcaaattctcaaacaaattgta 20897584  T
Q  649 atcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |    | ||||||||| || |||||||||||||||||||    
T  20897585 a----agtctcatctacctataggggtactaaagtgtta 20897619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 21754166 - 21754200
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  21754166 aaatctcatctagctttaggggtactaaagtgtta 21754200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 21763453 - 21763487
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||||||||||||||||||||||    
T  21763453 aaatctcatctagctttaggggtactaaagtgtta 21763487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 31917055 - 31917093
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  31917055 aacattctgatgaagaacacaacaacattctgatgttca 31917093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 37298827 - 37298789
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  37298827 aacattctgatgaagaacacaacaacattctgatgttca 37298789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 42090158 - 42090097
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| |  |||||||||||||||  |||||||||||||| |||||||||||||||||    
T  42090158 cattcaaacttctcacaaattgtaatcaag-tctcatctagcttttggggtactaaagtgtta 42090097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 687
Target Start/End: Original strand, 22245153 - 22245188
Alignment:
Q  652 aaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||| |||||||||||||||||||||||||    
T  22245153 aaaatctcatatagctttaggggtactaaagtgtta 22245188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 37537931 - 37537900
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  37537931 tctcatctagctttaggggtactaaagtgtta 37537900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Complemental strand, 37647042 - 37647011
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  37647042 tctcatctagctttaggggtactaaagtgtta 37647011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 4037992 - 4037954
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  4037992 aacattctgatgaagaacacagcaacattctgatgttca 4037954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 13571693 - 13571655
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  13571693 aacattctgatgaagaacacagcaacattctgatgttca 13571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 22173265 - 22173227
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  22173265 aacattctgatgaagaacacagcaacattctgatgttca 22173227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 27274194 - 27274156
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  27274194 aacattctgatgaagaacacagcaacattctgatgttca 27274156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 37537846 - 37537812
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||| |||||||||||||||    
T  37537846 aaatctcatctagctttagaggtactaaagtgtta 37537812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 37646957 - 37646923
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||| |||||||||||||||    
T  37646957 aaatctcatctagctttagaggtactaaagtgtta 37646923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 37817841 - 37817879
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  37817841 aacattctaatgaagaacacaacaacattctgatgttca 37817879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 376
Target Start/End: Complemental strand, 21483765 - 21483720
Alignment:
Q  331 gttcacgcagattttcaagtaaaagccagtggggcccatgacacat 376  Q
    |||||| ||||||||||||||||||  ||||||||||| |||||||    
T  21483765 gttcacccagattttcaagtaaaagttagtggggcccaggacacat 21483720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 20764370 - 20764417
Alignment:
Q  72 aagcatggacctgaagatgcagaaccactat--tctctctcctgcaca 117  Q
    |||||||| |||||||||||||| |||||||  |||||||||||||||    
T  20764370 aagcatgggcctgaagatgcagatccactatcctctctctcctgcaca 20764417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 20764521 - 20764573
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaaccca 265  Q
    |||| |||||||||||| |||||||||||| ||| |||| | |||||||||||    
T  20764521 cacgtattggataaacctagaaactcatcagacattcatcattgatgaaccca 20764573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 656 - 684
Target Start/End: Original strand, 36317080 - 36317108
Alignment:
Q  656 tctcatctagctttaggggtactaaagtg 684  Q
    |||||||||||||||||||||||||||||    
T  36317080 tctcatctagctttaggggtactaaagtg 36317108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 133; Significance: 8e-69; HSPs: 4)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 14 - 261
Target Start/End: Complemental strand, 198761 - 198513
Alignment:
Q  14 aatcagagatggacacgtatgagatttggtactctacaataccatgcaaatctcccaaaagcatggacctgaagatgcagaaccactattctctctcctg 113  Q
    ||||| |||||||||| ||||||||||| |||| ||||||| ||||||||||||| | || |||||   ||||| || | ||||||||||||||||||||    
T  198761 aatcaaagatggacacatatgagatttgttactatacaatatcatgcaaatctcctagaaacatgggtttgaagctgtataaccactattctctctcctg 198662  T
Q  114 cacacaatccgatgcatatttggaaaaagtttatgtt-gcaactttctgatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatcataagg 212  Q
    |||||||||| ||||| || ||||| || |||||    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  198661 cacacaatccaatgcagatctggaataactttatccaagcaacattctgatgtttgtgcaaaagacacaacacatgaataatgcccagaaaatcataacg 198562  T
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaa 261  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  198561 cacacattggataaacctagaaactcatcatacactcataaatgatgaa 198513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 298 - 486
Target Start/End: Complemental strand, 197168 - 196980
Alignment:
Q  298 tgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcacc 397  Q
    ||||||||| ||||||| || |||| | | ||||||||| || |||||||||||||||| || |||| ||||||||||||||| || |||||||||||||    
T  197168 tgaagaacacaacaacactcagatggtgataatgttcacccaaattttcaagtaaaagctagcggggtccatgacacatggcacaagaccattggtcacc 197069  T
Q  398 ctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||| ||||||||||| ||||||||||||  | ||| | ||  ||||||   |||| |||||||||| |||||||||||    
T  197068 ctctaacggctacaggagcccaagaattctataaatagagatcaaaagttctgcattacacacacctttgcaaaacaaacaagaaaaca 196980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 197224 - 197172
Alignment:
Q  274 tcatgatgaacatcaacattctgatgaagaacataacaacattctgatgttca 326  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||| |||||||    
T  197224 tcatgatgaacatcaatattctaatgaagaacacaacaacattctaatgttca 197172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 687
Target Start/End: Complemental strand, 196860 - 196797
Alignment:
Q  624 tcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||    ||||||||| |||| |||||| |||||||| ||||||||||||||||    
T  196860 tcattcaaactcctcttaaattgtaaacaaagtctcatttagctttaagggtactaaagtgtta 196797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 128; Significance: 8e-66; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 500 - 687
Target Start/End: Original strand, 1427 - 1613
Alignment:
Q  500 tgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatattgttaaagataatttctccctt 599  Q
    |||||||||||||||||||||| ||||||  |||||||  || ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||     
T  1427 tgaagctttagcatctgaattgttcatcatcgagattttaaattgtctctt-aagtgtaaatcaattctctcttatcttgttaaagataatttctccctc 1525  T
Q  600 cattcttctcttgtctcatttcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  1526 cattcttctcttgtttgatttcaatcattcaaactccatacaatttgtaatcaaaatctcatttagctttaggggtactaaagtgtta 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 122; Significance: 3e-62; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 298 - 687
Target Start/End: Original strand, 216929 - 217323
Alignment:
Q  298 tgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcacc 397  Q
    ||||||||| |||||||||||| || |||||||| | || |||| |||| ||||||||   |||||||||| ||||| ||||||||||||||||||||||    
T  216929 tgaagaacacaacaacattctggtggtcagaatgcttacccagaatttcgagtaaaagtttgtggggcccaagacacgtggcataacaccattggtcacc 217028  T
Q  398 ctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtg 497  Q
     |  |||||||| | |||||||| ||||||||||||| |  | ||||||||||||||||||||||||||||||| ||||||||||||||| | ||| |||    
T  217029 ttacaacggctatatgagcccaaaaactctataaataaagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaacatttgaaatgtg 217128  T
Q  498 tttgaagctttagc-atctgaattgatcatcactgagatt-tccaactgtatctttaagtgtaaatcaattctctcttatat---tgttaaagataattt 592  Q
    ||||||||  | || || |||||||||||||| ||||||| |  |  ||| ||||  |||||||||||||||| | ||  ||   | |||||||||||||    
T  217129 tttgaagcccttgcaatttgaattgatcatcaatgagattctttatatgt-tcttgtagtgtaaatcaattctttatttcatctcttttaaagataattt 217227  T
Q  593 ctcccttcattcttctcttgtctcatt-tcaatcattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
     ||| | |||||| || |||| |  || |||| ||||||||||||||||||||||||||  || || ||||||||||||| |||||||||||||||    
T  217228 ttccttccattctccttttgtttgtttctcaaacattcaaactccatacaaattgtaatttaagtcccatctagctttagaggtactaaagtgtta 217323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 309781 - 309619
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  309781 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacatcctacaacggctatatgagcccaaaga 309682  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  309681 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 309619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 216848 - 216925
Alignment:
Q  248 tcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||| ||||| ||||||| ||| |||| |||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  216848 tcatacatgataaacccaaatgaatgtc-tgatgaacatcaacattctgatgaagaacacaacaacattctaatgttca 216925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 115; Significance: 5e-58; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 617 - 439
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  617 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 518  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  517 tatatgagcccaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaaca 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 304 - 243
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  304 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 111; Significance: 1e-55; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 308 - 486
Target Start/End: Complemental strand, 111542 - 111364
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |  ||||||    
T  111542 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattggtcaccttacaacggc 111443  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | ||||||||  ||||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  111442 tatatgagcccaaagactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacaagaaaaca 111364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 633 - 687
Target Start/End: Complemental strand, 111224 - 111171
Alignment:
Q  633 ctccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||    
T  111224 ctccatataaattgtaa-caaagtctcatctagctttaggggtactatagtgtta 111171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 326
Target Start/End: Complemental strand, 111655 - 111555
Alignment:
Q  227 acccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataacaacattctgatgttc 325  Q
    |||||||||||||||| ||| ||||   |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| | ||||||||||||||||    
T  111655 acccagaaactcatcagacattcatccttgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacagcaacattctgatgttc 111556  T
Q  326 a 326  Q
    |    
T  111555 a 111555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 109; Significance: 2e-54; HSPs: 7)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 302 - 506
Target Start/End: Original strand, 146979 - 147183
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||| |||||||||||||  ||||||||||||||||||  ||||| |||| ||||| |||||||||||||||||||| | | |    
T  146979 gaacacaacaacattctgatggtcagaatgttcacctagattttcaagtaaaagcttgtgggacccaggacacgtggcataacaccattggtcatcttat 147078  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttg 501  Q
    |||||||| | |||||||| |||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||| ||| |   ||||||    
T  147079 aacggctatatgagcccaaaaactctataaatagagatcaaaggctcaacattacttgcaccattgcaaatcatacaagaaaacaacttgattttgtttg 147178  T
Q  502 aagct 506  Q
    |||||    
T  147179 aagct 147183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 114314 - 114130
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||  |||||||||| ||||| || ||||||||||||| ||||| |      
T  114314 gaacacaacaacattctgatgttcaaaatgttcacctagattttcaagtaaaagcttgtggggcccaggacacgtgacataacaccattgatcaccttac 114215  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||| | |||||||| |||||||||||||||  | ||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  114214 aacggctatatgagcccaaaaactctataaatagagatcaaaggctcatcattacttgcaccattgaaaagcatacaagaaaaca 114130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 233750 - 233588
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  233750 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 233651  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  233650 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 233588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 222 - 326
Target Start/End: Complemental strand, 114425 - 114321
Alignment:
Q  222 gataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgat 321  Q
    ||||||||||||||||||||| ||| ||||   |||| ||||||  |||    ||| ||||| |||||||||||||||||||||| ||||||||||||||    
T  114425 gataaacccagaaactcatcagacattcatccttgataaacccagatgaagaacatcatgaatatcaacattctgatgaagaacacaacaacattctgat 114326  T
Q  322 gttca 326  Q
     ||||    
T  114325 attca 114321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 146858 - 146972
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa-cattctgatgaagaacataaca 311  Q
    |||| ||||||| ||||||||||||||||| ||| |||| | |||||||||||  |||     || ||||| ||||| ||||||||||||||||| | ||    
T  146858 cacgtattggatgaacccagaaactcatcagacattcatcattgatgaacccagatgaagaatatcatgaatatcaaacattctgatgaagaacacagca 146957  T
Q  312 acattctgatgttca 326  Q
    |||||||||||||||    
T  146958 acattctgatgttca 146972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 147311 - 147372
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| |||||||||||| |||| |||  ||||||||||||||||||||||||||||||||    
T  147311 cattcaacctccatacaaatagtaa-caatgtctcatctagctttaggggtactaaagtgtta 147372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 146694 - 146754
Alignment:
Q  59 gcaaatctcccaaaagcatggacctgaagatgcagaaccactat--tctctctcctgcaca 117  Q
    ||||||||||   |||||||| |||||||||||||| |||||||  |||||||||||||||    
T  146694 gcaaatctccttgaagcatgggcctgaagatgcagatccactatcctctctctcctgcaca 146754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1705 (Bit Score: 107; Significance: 3e-53; HSPs: 2)
Name: scaffold1705
Description:

Target: scaffold1705; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 308 - 486
Target Start/End: Original strand, 1197 - 1375
Alignment:
Q  308 aacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggc 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||| |||||||||||||||| ||||| |  ||||||    
T  1197 aacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggacacgtggcataacaccattgatcaccttacaacggc 1296  T
Q  408 tacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || | |||||||| |||||||||||||||  | ||||||||| ||||||||||||||||||||| |||||| |||||||    
T  1297 tatatgagcccaaaaactctataaatagagatcaaaggctcagcattacttgcaccattgcaaagcatacatgaaaaca 1375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1705; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 1146 - 1184
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  1146 aacattctgatgaagaacacagcaacattctgatgttca 1184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 101; Significance: 1e-49; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 303 - 486
Target Start/End: Original strand, 19048 - 19228
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctcta 402  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| | ||| |||||||||||||||||||||| |  |    
T  19048 aacacaacaacattctgatgttcagaatgttcacccagattttcaagtaaaagcttgtggggcccaggtcacgtggcataacaccattggtcaccttaca 19147  T
Q  403 acggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||| | |||||||| |||||  ||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  19148 acggctatatgagcccaa-aactc--taaatagagatcaaaggctcaacattacttgcaccattgcaaagcatacaagaaaaca 19228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 213 - 324
Target Start/End: Original strand, 18926 - 19038
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaa-cattctgatgaagaacataaca 311  Q
    |||| ||||||| ||||||||||||||||| ||| |||| | ||||||||| |  |||    ||| ||||| ||||| ||||||||||||||||| ||||    
T  18926 cacgtattggatgaacccagaaactcatcagacattcatcattgatgaacctagatgaagaacatcatgaatatcaaacattctgatgaagaacacaaca 19025  T
Q  312 acattctgatgtt 324  Q
    |||||||||||||    
T  19026 acattctgatgtt 19038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 687
Target Start/End: Original strand, 19374 - 19436
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttag-gggtactaaagtgtta 687  Q
    |||||||||| |  ||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  19374 cattcaaacttctcacaaattgtaatc-aagtctcatctagctttagcgggtactaaagtgtta 19436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 152 - 326
Target Start/End: Original strand, 15526 - 15700
Alignment:
Q  152 caactttctgatgtttgtgtaaaagacacaacacatgaataatgcccagaaaatcataaggcacgcattggataaacccagaaactcatcatacactcat 251  Q
    |||| |||||||||||||| ||||||||||||||||||||| || ||||||||  ||||||||| ||||| | ||||||||||| |||||||||||||||    
T  15526 caacattctgatgtttgtgcaaaagacacaacacatgaatattgtccagaaaacaataaggcacacattgaacaaacccagaaattcatcatacactcat 15625  T
Q  252 aaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||  |||    ||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  15626 aaatgatgaacccagatgaagaacatgatgaaaatgaacattctgatgaagaacacaacaacattctgatgttca 15700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 15704 - 15769
Alignment:
Q  298 tgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggg 363  Q
    ||||||| | ||||||||||||||| | ||||||||||| ||||||||| ||||||||| ||||||    
T  15704 tgaagaagacaacaacattctgatggttagaatgttcacccagattttctagtaaaagctagtggg 15769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 94; Significance: 2e-45; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 303 - 532
Target Start/End: Original strand, 7716 - 7944
Alignment:
Q  303 aacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctcta 402  Q
    |||| ||||||||||||||| ||||||||||||  |||||||| |||||||||   ||||| |||| |||||||||||||||||||||||||||| |  |    
T  7716 aacacaacaacattctgatggtcagaatgttcatccagattttaaagtaaaagtttgtgggacccaggacacatggcataacaccattggtcaccttaca 7815  T
Q  403 acggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttga 502  Q
    || |||| | |||||||| |||||||||||||||  | ||||||| | ||||||||||||||||||||| |||||| ||||||| | |||||  ||||||    
T  7816 acagctatatgagcccaaaaactctataaatagagatcaaaggcttagcattacttgcaccattgcaaagcatacacgaaaacaac-taaaatcgtttga 7914  T
Q  503 agctttagcatctgaattgatcatcactga 532  Q
    || | | |||  ||||||||||||||||||    
T  7915 agttcttgcaattgaattgatcatcactga 7944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 7607 - 7708
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    |||||||||||||||||||||| ||||   |||||||||||  |||    ||| ||||| ||||||||| |||||||||||| |||||||||||||||||    
T  7607 aaacccagaaactcatcatacattcatctttgatgaacccagatgaagaacatcatgaatatcaacattttgatgaagaacacaacaacattctgatgtt 7706  T
Q  325 ca 326  Q
    ||    
T  7707 ca 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 641 - 687
Target Start/End: Original strand, 8057 - 8103
Alignment:
Q  641 aaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||    
T  8057 aaattgtaatcaaagtctcatctagctttagggctactaaagtgtta 8103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 200 - 483
Target Start/End: Original strand, 11467 - 11750
Alignment:
Q  200 gaaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatg 299  Q
    |||||||||| ||||| ||||| | |||||||||||||||| ||| | |||| |||||||||||||  |||    ||| || ||||| ||||||||||||    
T  11467 gaaaatcatatggcacacattgaacaaacccagaaactcataataaattcatcaatgatgaacccagatgaagaacatcataaacattaacattctgatg 11566  T
Q  300 aagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccct 399  Q
    ||||||| ||||||||||||||| ||| ||||||||| || |||||||||||||||| ||||||||||| ||||| ||||| || ||||||| |||  ||    
T  11567 aagaacacaacaacattctgatggtcaaaatgttcacccatattttcaagtaaaagctagtggggcccaggacacgtggcaaaagaccattgatcatgct 11666  T
Q  400 ctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaa 483  Q
      ||||| || | ||||||||  | ||||||||||||  | || |  ||| ||| ||||||||| ||||||| |||||||||||    
T  11667 acaacggttatatgagcccaaacattctataaatagagatcaaggcttcatcataacttgcacctttgcaaagcatacaagaaa 11750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 11319 - 11374
Alignment:
Q  61 aaatctcccaaaagcatggacctgaagatgcagaaccactattctctctcctgcac 116  Q
    |||||||| | |||||||| |||||||||||||  |||||||||||||||||||||    
T  11319 aaatctcctataagcatgggcctgaagatgcaggtccactattctctctcctgcac 11374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 687
Target Start/End: Original strand, 11817 - 11950
Alignment:
Q  552 aagtgtaaatcaattctctcttatattg--ttaaagataatttctcccttcattcttctcttgtctcatttcaatcattcaaactc-catacaaattgta 648  Q
    |||||||||||||||||||||||| ||   | ||||||||  | |  |||| |||||| || |||| ||||||||||||||||||| || ||||||||||    
T  11817 aagtgtaaatcaattctctcttatctttcataaaagataaact-tatcttctttcttccctggtctgatttcaatcattcaaactcacaaacaaattgta 11915  T
Q  649 atcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |    | ||||||||| | ||||||||||||||||||||    
T  11916 a----agtctcatctaacattaggggtactaaagtgtta 11950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 90; Significance: 4e-43; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 302 - 471
Target Start/End: Original strand, 23450 - 23619
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| |||||||||||| |||||||||||||||| |||||||||||||||||||  |||| ||| | ||||| |||||||||||||||||||||| |      
T  23450 gaacacaacaacattctggtgttcagaatgttcacccagattttcaagtaaaagcatgtggagccaaggacacgtggcataacaccattggtcaccttac 23549  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaa 471  Q
    |||||||| | ||||| ||  ||||||||||||||  | |||||||||||||||||||||||||||||||    
T  23550 aacggctatatgagccgaaagactctataaatagagatcaaaggctcaacattacttgcaccattgcaaa 23619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 23344 - 23443
Alignment:
Q  228 cccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatc-aacattctgatgaagaacataacaacattctgatgttca 326  Q
    ||||||||||||||| ||| ||||   |||||||||||  |||    ||| ||||| ||| ||||||||||||||||||| | |||||||||||||||||    
T  23344 cccagaaactcatcagacattcatccttgatgaacccagatgaagaacatcatgaatatcaaacattctgatgaagaacacagcaacattctgatgttca 23443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0764 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 338 - 687
Target Start/End: Complemental strand, 528 - 175
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||| ||  || |||||||||||||||||||     
T  528 cagaatttcaagtgaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctataaaggctcaagaactctataaatagag 429  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  428 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 329  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataa-tttctcccttcattcttctcttgtctcatttcaatcattcaaac-t 634  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| ||||  ||| |||||||||||||||| || |  ||||||||||| |    
T  328 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatttcaacctccattcttctcttgtctgatctatatcattcaaacct 229  T
Q  635 ccatacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  228 ccatacaaattgtaaagaaaagtctcatctagctttaggggtactaaagtgtta 175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 78; Significance: 6e-36; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 338 - 687
Target Start/End: Original strand, 6081 - 6434
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||| ||  || |||||||||||||||||||     
T  6081 cagaatttcaagtgaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctataaaggctcaagaactctataaatagag 6180  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  6181 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 6280  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataa-tttctcccttcattcttctcttgtctcatttcaatcattcaaac-t 634  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| ||||  ||| |||||||||||||||| || |  ||||||||||| |    
T  6281 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatttcaacctccattcttctcttgtctgatctatatcattcaaacct 6380  T
Q  635 ccatacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  6381 ccatacaaattgtaaagaaaagtctcatctagctttaggggtactaaagtgtta 6434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 338 - 687
Target Start/End: Original strand, 20238 - 20591
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| ||||   ||||| |||| ||||| |||||||| |||| ||||||| ||| |||||||| ||  || |||||||||||||||||||     
T  20238 cagaatttcaagtgaaagttggtgggtcccaggacacgtggcataagaccagtggtcactctccaacggctataaaggctcaagaactctataaatagag 20337  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagattt 537  Q
     | ||   |||| ||| ||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||||||||  |||||     
T  20338 atcaagacctcagcataacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaatattgatcatcacaaagattc 20437  T
Q  538 ccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataa-tttctcccttcattcttctcttgtctcatttcaatcattcaaac-t 634  Q
    | |   || |    |||||||||||||| |||||||||| || | |||||||| ||||  ||| |||||||||||||||| || |  ||||||||||| |    
T  20438 caagaagtcttcaaaagtgtaaatcaatatctctcttatcttttcaaagataaatttcaacctccattcttctcttgtctgatctatatcattcaaacct 20537  T
Q  635 ccatacaaattgtaatcaaaa-tctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  20538 ccatacaaattgtaaagaaaagtctcatctagctttaggggtactaaagtgtta 20591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 338 - 686
Target Start/End: Complemental strand, 40320 - 39973
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaaga-actctataaataga 436  Q
    |||| |||||| ||||||   ||||| |||| ||||| ||||| || || ||||||||| ||| || | |||||| ||  ||||| ||||||||||||||    
T  40320 cagaatttcaaataaaagttggtgggtcccaagacacgtggcacaagactattggtcacactccaatgactacaaaaggtcaagacactctataaataga 40221  T
Q  437 agtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagctttagcatctgaattgatcatcactgagatt 536  Q
    |||  ||||||| |||||||   |||| ||||||| |||||||||||||| | ||| |||||||||||||||||||     ||||||| ||||  |||||    
T  40220 agtagaaggctcgacattacacacacctttgcaaagcatacaagaaaacaacataagagtgtttgaagctttagcaaaaacattgatc-tcacaaagatt 40122  T
Q  537 tccaactgtatctttaagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtctcatttcaatcattcaaact 634  Q
     | |   |||| |  | ||||  |||||| | |||||||| || |||||||||| | |||||||||||||||||||||||  ||||||||||||||||||    
T  40121 ccaagaagtatttaaacgtgtgtatcaatatttctcttatctttttaaagataaatatctcccttcattcttctcttgtcatatttcaatcattcaaact 40022  T
Q  635 c-catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtt 686  Q
    | || |||||||||    ||| ||||||||||||||||||||| |||||||||    
T  40021 cacaaacaaattgt----aaagtctcatctagctttaggggtattaaagtgtt 39973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 72; Significance: 2e-32; HSPs: 6)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 298 - 484
Target Start/End: Original strand, 58876 - 59060
Alignment:
Q  298 tgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcacc 397  Q
    ||||||||| ||||||||| ||||| |||||||||||||  || ||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||    
T  58876 tgaagaacacaacaacattatgatggtcagaatgttcaccgagtttttcaagtaaaagccagtggggcccaggacacgtggcaaaagaccattggtcacc 58975  T
Q  398 ctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa 484  Q
    ||  | |||||| | |||||||  ||| |||||||||||  | || | |||||||| ||||||||   |||||| ||||||||||||    
T  58976 ctacagcggctatatgagccca--aacactataaatagagatcaaggcctcaacataacttgcacatctgcaaagcatacaagaaaa 59060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 298 - 484
Target Start/End: Original strand, 60304 - 60488
Alignment:
Q  298 tgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcacc 397  Q
    ||||||||| ||||||||| ||||| |||||||||||||  || ||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||    
T  60304 tgaagaacacaacaacattatgatggtcagaatgttcaccgagtttttcaagtaaaagccagtggggcccaggacacgtggcaaaagaccattggtcacc 60403  T
Q  398 ctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa 484  Q
    ||  | |||||| | |||||||  ||| |||||||||||  | || | |||||||| ||||||||   |||||| ||||||||||||    
T  60404 ctacagcggctatatgagccca--aacactataaatagagatcaaggcctcaacataacttgcacatctgcaaagcatacaagaaaa 60488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 298 - 484
Target Start/End: Original strand, 54924 - 55111
Alignment:
Q  298 tgaagaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagcca---gtggggcccatgacacatggcataacaccattggtc 394  Q
    ||||||||| ||||||||| | ||| ||| |||||||||  || |||||||||||||||||   |||||||||| ||||| ||||| || ||||||||||    
T  54924 tgaagaacacaacaacattatcatggtcaaaatgttcaccgagtttttcaagtaaaagccagtggtggggcccaggacacgtggcaaaagaccattggtc 55023  T
Q  395 accctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaa 484  Q
    |||||  |||||||| | |||||||  ||| |||||||||||  | || | |||||||| ||||||||   |||||| ||||||||||||    
T  55024 accctacaacggctatatgagccca--aacactataaatagagatcaaggcctcaacataacttgcacatctgcaaagcatacaagaaaa 55111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 201 - 326
Target Start/End: Original strand, 54795 - 54920
Alignment:
Q  201 aaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatga 300  Q
    ||||||||| || || ||||| | ||||| ||||||||||||| || |||| ||||||||||| |  |||    ||| ||||||||||||||| ||||||    
T  54795 aaaatcatatggaacacattgaacaaaccaagaaactcatcattcattcatcaatgatgaacctagatgaagaacatcatgaacatcaacattttgatga 54894  T
Q  301 agaacataacaacattctgatgttca 326  Q
    |||||||| |||||||||||||||||    
T  54895 agaacatagcaacattctgatgttca 54920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 201 - 326
Target Start/End: Original strand, 58747 - 58872
Alignment:
Q  201 aaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatga 300  Q
    ||||||||| || || ||||| | ||||| ||||||||||||| || |||| ||||||||||| |  |||    ||| ||||||||||||||| ||||||    
T  58747 aaaatcatatggaacacattgaacaaacctagaaactcatcattcattcatcaatgatgaacctagatgaagaacatcatgaacatcaacattttgatga 58846  T
Q  301 agaacataacaacattctgatgttca 326  Q
    |||||||| |||||||||||||||||    
T  58847 agaacatagcaacattctgatgttca 58872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 201 - 326
Target Start/End: Original strand, 60175 - 60300
Alignment:
Q  201 aaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatga 300  Q
    ||||||||| || || ||||| | ||||| ||||||||||||| || |||| ||||||||||| |  |||    ||| ||||||||||||||| ||||||    
T  60175 aaaatcatatggaacacattgaacaaacctagaaactcatcattcattcatcaatgatgaacctagatgaagaacatcatgaacatcaacattttgatga 60274  T
Q  301 agaacataacaacattctgatgttca 326  Q
    |||||||| |||||||||||||||||    
T  60275 agaacatagcaacattctgatgttca 60300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 66; Significance: 8e-29; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 385 - 687
Target Start/End: Complemental strand, 6713 - 6412
Alignment:
Q  385 accattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaag-aaa 483  Q
    |||||||||||||||  |||||||| | |||||||| |||||||||||||||  | ||   |||||||| ||||||||||||||||| ||| |||| |||    
T  6713 accattggtcaccctacaacggctatatgagcccaaaaactctataaatagagatcaagacctcaacataacttgcaccattgcaaagcatgcaagaaaa 6614  T
Q  484 acatcttaaaagtg-tttgaagctttagcatctgaattgatcatcactgagatttccaactgtatctttaagtgtaaatcaattctctcttatatt--gt 580  Q
    ||| | ||| |||| |||||||||||||||    |||||||||||||  ||||| | |   || | |  |||||||||||||||||||||||| ||   |    
T  6613 acaacataagagtgttttgaagctttagca--aaaattgatcatcacaaagattccaagaagtct-taaaagtgtaaatcaattctctcttatctttctt 6517  T
Q  581 taaagat-aatttctcccttcattcttctcttgtctcatttcaatcattcaaactc-catacaaattgtaatcaaaatctcatctagctttaggggtact 678  Q
     |||||| ||  |||| |||| |||||||||||||| |||||||||||||||||||  | |||||||||    ||| |||||| ||||||||||||||||    
T  6516 aaaagataaacctctctcttctttcttctcttgtctgatttcaatcattcaaactcataaacaaattgt----aaagtctcatttagctttaggggtact 6421  T
Q  679 aaagtgtta 687  Q
    |||||||||    
T  6420 aaagtgtta 6412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 6858 - 6793
Alignment:
Q  201 aaaatcataaggcacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaa 266  Q
    ||||||||| ||||| ||||| | ||||||| |||||||||| ||| |||| ||||||||||||||    
T  6858 aaaatcatatggcacacattgaacaaacccataaactcatcacacattcatcaatgatgaacccaa 6793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 338 - 684
Target Start/End: Complemental strand, 3232 - 2887
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    ||||||||||||||||||  |||||||| || ||||||||||| |  ||| ||||  |||||  |||||||| | ||||| || |||||||||||||||     
T  3232 cagattttcaagtaaaagttagtggggcacaggacacatggcacacgaccgttggataccctacaacggctatatgagccgaaaaactctataaatagag 3133  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaag-aaaacatcttaaaagtg-tttgaagctttagcatctgaattgatcatcactgagat 535  Q
     | ||||||||||||| ||||| | | ||||||| |||||||| |||||| | ||| |||| |||| ||||||||||    |||||||||||||  ||||    
T  3132 atcaaaggctcaacatcacttgtagcgttgcaaagcatacaagaaaaacaacataagagtgttttggagctttagca--aaaattgatcatcacaaagat 3035  T
Q  536 ttccaactgtatctttaagtgtaaatcaattctctctta-tattgttaaagat-aatttctcccttcattcttctcttgtctcatttcaatcattcaaac 633  Q
    | | |   || | |  ||||||||||||||||||||||| | || | |||||| || ||||| || | ||||| |||||||| |||||||||||||||||    
T  3034 tccaagaagtctttaaaagtgtaaatcaattctctcttatttttctcaaagataaacttctctctaccttcttttcttgtctgatttcaatcattcaaac 2935  T
Q  634 tc-catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtg 684  Q
    || || |||  ||||    ||| ||||||||||||||| |||||||||||||    
T  2934 tcacaaacatcttgt----aaagtctcatctagctttacgggtactaaagtg 2887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 61; Significance: 8e-26; HSPs: 6)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 302 - 486
Target Start/End: Complemental strand, 29065 - 28882
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctct 401  Q
    ||||| ||||||||| ||||||||||||||||  | |||| |||||||| || ||   |||| |||| ||||| |||||||||||||||||||||| |      
T  29065 gaacacaacaacattttgatgttcagaatgtttgcccagaatttcaagttaa-gcttttgggacccaagacacgtggcataacaccattggtcaccttac 28967  T
Q  402 aacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    || ||||| ||||||||||  ||||||||||||||  | || | || | ||||||||||||||||||||| ||||||| ||||||    
T  28966 aatggctataagagcccaaagactctataaatagagatcaaggccttagcattacttgcaccattgcaaagcatacaaaaaaaca 28882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 376 - 486
Target Start/End: Complemental strand, 50196 - 50086
Alignment:
Q  376 tggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacat 475  Q
    |||||||||||||||||||||| |  |||||||| | ||||||||  ||||||||||||||  | |||||||||  |||||||||||||||||||| |||    
T  50196 tggcataacaccattggtcaccttacaacggctatatgagcccaaagactctataaatagagatcaaaggctcagtattacttgcaccattgcaaagcat 50097  T
Q  476 acaagaaaaca 486  Q
    |||||||||||    
T  50096 acaagaaaaca 50086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 687
Target Start/End: Complemental strand, 49765 - 49707
Alignment:
Q  628 tcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  49765 tcaacctccatacaaattgtaa-caaagtctcatctatctttaggggtactaaagtgtta 49707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 636 - 687
Target Start/End: Complemental strand, 28554 - 28504
Alignment:
Q  636 catacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  28554 catacaaattgtaa-caaagtctcatatagctttaggggtactaaagtgtta 28504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 28450 - 28416
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||| |||||||||||||||||    
T  28450 aaatctcatctagctttcggggtactaaagtgtta 28416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 29110 - 29072
Alignment:
Q  288 aacattctgatgaagaacataacaacattctgatgttca 326  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  29110 aacattttgatgaagaacacaacaacattctgatgttca 29072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 74491 - 74329
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  74491 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 74392  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  74391 ctctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 74329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 74191 - 74130
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  74191 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 74130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1468 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold1468
Description:

Target: scaffold1468; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 302 - 391
Target Start/End: Original strand, 1614 - 1703
Alignment:
Q  302 gaacataacaacattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattg 391  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||| ||| ||||| ||||||||||||||||    
T  1614 gaacacaacaacattctgatggtcagaatgttcacccagattttcaagtaaaagcttgtggggtccaggacacgtggcataacaccattg 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1468; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 1506 - 1607
Alignment:
Q  225 aaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaacattctgatgtt 324  Q
    |||||||||||||||||| ||| |||| | |||||||||||  |||    ||| ||||| ||||||||| |||||||||||| |||||||||||||||||    
T  1506 aaacccagaaactcatcagacattcatcattgatgaacccagatgaagaacatcatgaatatcaacattttgatgaagaacacaacaacattctgatgtt 1605  T
Q  325 ca 326  Q
    ||    
T  1606 ca 1607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 486
Target Start/End: Original strand, 8446 - 8594
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| |||||  ||||| |||| |||||||||||||| |||||||| ||||||  |||||||| | ||||||||  ||||||||||||||     
T  8446 cagaatttcaagttaaagcttgtgggacccaggacacatggcataagaccattggacaccctacaacggctatatgagcccaaagactctataaatagag 8545  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | || ||||  ||||||||||||||||| ||||||||||||||    
T  8546 atcaaggccttaacaaaacttgcaccattgcaaagcatacaagaaaaca 8594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 626 - 687
Target Start/End: Original strand, 8716 - 8776
Alignment:
Q  626 attcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8716 attcaacctccatacaaattgtaa-caaaatctcatctagcttgaggggtactaaagtgtta 8776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 376 - 536
Target Start/End: Complemental strand, 16324 - 16163
Alignment:
Q  376 tggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacat 475  Q
    |||||||||||||||||||||| |  |||| ||| | ||||| || ||||||||||||| |  | ||||||||  |||||||| |||||||||||| |||    
T  16324 tggcataacaccattggtcaccttacaacgactatatgagcctaaaaactctataaataaagatcaaaggctcggcattacttacaccattgcaaagcat 16225  T
Q  476 acaagaaaacatcttaaaagtgtttgaagctttagc-atctgaattgatcatcactgagatt 536  Q
    |||| ||||||| | ||  |||||||||||| | || || ||||||||||||||| ||||||    
T  16224 acaataaaacatttgaagcgtgtttgaagctcttgcaatttgaattgatcatcaccgagatt 16163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 16399 - 16350
Alignment:
Q  277 tgatgaacatcaacattctgatgaagaacataacaacattctgatgttca 326  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16399 tgatgaacatcaacattctgatgaagaacacaacaacattctgatgttca 16350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 338 - 486
Target Start/End: Complemental strand, 17141 - 16993
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaatagaa 437  Q
    |||| |||||||| |||||  ||||| ||||||||||||| |||||||||||||| ||||||  |||||||| | |||||||   ||||||||||||||     
T  17141 cagaatttcaagttaaagcttgtgggacccatgacacatgacataacaccattggacaccctacaacggctatatgagcccagagactctataaatagag 17042  T
Q  438 gtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
     | || | || | ||  ||||||||||||||||| ||||||||||||||    
T  17041 atcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 16993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 508
Target Start/End: Complemental strand, 92635 - 92451
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| ||||   ||||| |||| |||||||||||||| |||||||| ||||||  |||||||| | ||||||||  |    
T  92635 tcagaatgtttgcccagaatttcaagttaaagtttgtgggacccaggacacatggcataagaccattggacaccctacaacggctatatgagcccaaaga 92536  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaacatcttaaaagtgtttgaagcttt 508  Q
    |||||||||||||  | || | || | ||  ||||||||||||||||| ||||||||||| || ||| |   |||||||||||||    
T  92535 ctctataaatagagatcaaggccttagcaaaacttgcaccattgcaaagcatacaagaaagcaacttgattttgtttgaagcttt 92451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 92342 - 92281
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||    
T  92342 cattcaacctccatacaaattgtaa-caaagtctcatctagatttagaggtactaaagtgtta 92281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 19126 - 18964
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| |||||||| |||||  ||||| |||| |||| |||||||||||||||||| || |||  |||||||| | ||||||||  |    
T  19126 tcagaatgtttgcccagaatttcaagttaaagcttgtgggacccaggacatatggcataacaccattggacatcctacaacggctatatgagcccaaaga 19027  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    |||||||||||||  | || |  | | ||  ||||||||||||||||| ||||||||||||||    
T  19026 ctctataaatagagatcaaggcattagcaaaacttgcaccattgcaaagcatacaagaaaaca 18964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 7604 - 7442
Alignment:
Q  324 tcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaa 423  Q
    ||||||||||  | |||| ||||||||  ||||  ||||| |||| ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  |    
T  7604 tcagaatgtttgcccagaatttcaagtttaagcttgtgggacccaggacacatggcataacaccattggacaccctacaacggctatatgagcccaaaga 7505  T
Q  424 ctctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||||||||||| |     | || | ||  ||||||||||||||||| ||||||||||||||    
T  7504 ctctataaatagagggcttggccttagcaaaacttgcaccattgcaaagcatacaagaaaaca 7442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 625 - 687
Target Start/End: Complemental strand, 1421 - 1360
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  1421 cattcaacctctatacaaattgtaa-caaagtctcatctagctttaggggtactaaagtgtta 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 486
Target Start/End: Complemental strand, 1729 - 1556
Alignment:
Q  313 cattctgatgttcagaatgttcacgcagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaa 412  Q
    |||||||||| ||| |||||| || |||||||||||||| |||    |||| |||| ||||| |||||||||||||||||||||| |  || ||||| |     
T  1729 cattctgatggtcaaaatgtttacccagattttcaagtagaagtttatgggacccaggacacgtggcataacaccattggtcaccttacaatggctatat 1630  T
Q  413 gagcccaagaactctataaatagaagtgaaaggctcaacattacttgcaccattgcaaaacatacaagaaaaca 486  Q
    ||||| ||  |||||||||||||   | || | || | ||  || |||||||||||||| ||||||||||||||    
T  1629 gagcctaaagactctataaatagggatcaaggccttagcaaaacatgcaccattgcaaagcatacaagaaaaca 1556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 55588 - 55490
Alignment:
Q  338 cagattttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaataga 436  Q
    |||| |||||||| |||||  ||||| |||| |||||||||||||| |||||||| ||||||  |||||||| | ||||||||  ||||||||||||||    
T  55588 cagaatttcaagttaaagcttgtgggacccaggacacatggcataataccattggacaccctacaacggctatatgagcccaaagactctataaataga 55490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 625 - 683
Target Start/End: Complemental strand, 55308 - 55251
Alignment:
Q  625 cattcaaactccatacaaattgtaatcaaaatctcatctagctttaggggtactaaagt 683  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||||||| ||||||    
T  55308 cattcaacctccatacaaattgtaa-caaagtctcatctagctttaggggtattaaagt 55251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 343 - 434
Target Start/End: Complemental strand, 20900 - 20809
Alignment:
Q  343 tttcaagtaaaagccagtggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaata 434  Q
    ||||||||||||||  ||| | || | ||||||||||||||||||||||| ||||||  |||||||| | ||||||||  ||||||||||||    
T  20900 tttcaagtaaaagcttgtgagacctaggacacatggcataacaccattggacaccctacaacggctatatgagcccaatgactctataaata 20809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 676
Target Start/End: Complemental strand, 20603 - 20556
Alignment:
Q  628 tcaaactccatacaaattgtaatcaaaatctcatctagctttaggggta 676  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||||||    
T  20603 tcaacctccatacaaattgtaa-caaagtctcatctagctttaggggta 20556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Complemental strand, 20492 - 20458
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||| |||||||||||||||||||||||||    
T  20492 aaatctcatatagctttaggggtactaaagtgtta 20458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 4522 - 4624
Alignment:
Q  213 cacgcattggataaacccagaaactcatcatacactcataaatgatgaacccaactgattgtcatgatgaacatcaacattctgatgaagaacataacaa 312  Q
    ||||||||||| ||||||| |||||||||| ||| |||| | ||||||| |||| |||    |||  |||| ||| |||||||||||||||||| |||||    
T  4522 cacgcattggacaaacccaaaaactcatcagacattcatcattgatgaatccaaatgaagaacatcttgaatatcgacattctgatgaagaacacaacaa 4621  T
Q  313 cat 315  Q
    |||    
T  4622 cat 4624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 436
Target Start/End: Original strand, 14354 - 14430
Alignment:
Q  360 tggggcccatgacacatggcataacaccattggtcaccctctaacggctacaagagcccaagaactctataaataga 436  Q
    |||| |||| ||||| || ||||| |||| ||||||| ||| |||||||||||  || |||||||||||||||||||    
T  14354 tgggtcccaagacacgtgacataagaccagtggtcactctccaacggctacaaaggctcaagaactctataaataga 14430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 615
Target Start/End: Original strand, 14546 - 14611
Alignment:
Q  552 aagtgtaaatcaat-tctctcttatattgttaaagataatt-tctcccttcattcttctcttgtct 615  Q
    |||||||||||||| | |||||||| || |||||||||| | ||||||| ||||||||||||||||    
T  14546 aagtgtaaatcaatatttctcttatctttttaaagataaatctctccctccattcttctcttgtct 14611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 656 - 687
Target Start/End: Original strand, 8595 - 8626
Alignment:
Q  656 tctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||||||||||||||||||||||||||    
T  8595 tctcatctagctttaggggtactaaagtgtta 8626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 653 - 687
Target Start/End: Original strand, 8768 - 8802
Alignment:
Q  653 aaatctcatctagctttaggggtactaaagtgtta 687  Q
    ||||||||| |||||||||||||||||||||||||    
T  8768 aaatctcatatagctttaggggtactaaagtgtta 8802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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