View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0359_low_31 (Length: 218)
Name: NF0359_low_31
Description: NF0359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0359_low_31 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 88 - 218
Target Start/End: Complemental strand, 543412 - 543282
Alignment:
| Q |
88 |
aggggtagttattgcatatcataagtactcaatttgacggaaaagtaaacaaataacatcacgatcttaacagtaacaaatatttagacgacatctatat |
187 |
Q |
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| T |
543412 |
aggggtagttattccatatcataagtactcaaattgacggaaaagtaaacaaataacatcacgatcttaacagtaacaaatatttagacgacatctatat |
543313 |
T |
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| Q |
188 |
ctagatctataagccagttacataaatatat |
218 |
Q |
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| T |
543312 |
ctagatctataagccagttacataaatatat |
543282 |
T |
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