View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0359_low_32 (Length: 218)
Name: NF0359_low_32
Description: NF0359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0359_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 52 - 194
Target Start/End: Complemental strand, 33338174 - 33338032
Alignment:
| Q |
52 |
caaaggttcatcatccctaaccaaatataaacacttatataatgggataagaaacaggtaaagataagaagaaaaactagggttttttacattcaaattt |
151 |
Q |
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|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
33338174 |
caaaggttcatcatccctaaccaaatataaacacctacataatgggataagaaacaggtaaagataagaagaaaaactagggtttcttacattcaaattt |
33338075 |
T |
|
| Q |
152 |
cagtagtcccctacagttgcactatcattcaaggtgtttttgg |
194 |
Q |
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|||||||||||||| ||||||||||| |||||||||||||||| |
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| T |
33338074 |
cagtagtcccctaccgttgcactatcgttcaaggtgtttttgg |
33338032 |
T |
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