View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0360_low_28 (Length: 284)

Name: NF0360_low_28
Description: NF0360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0360_low_28
NF0360_low_28
[»] scaffold0302 (2 HSPs)
scaffold0302 (132-211)||(7356-7435)
scaffold0302 (132-211)||(414-493)
[»] chr1 (7 HSPs)
chr1 (132-211)||(20927241-20927320)
chr1 (132-211)||(20829485-20829564)
chr1 (132-211)||(41215949-41216028)
chr1 (132-201)||(35930918-35930987)
chr1 (132-211)||(20527240-20527319)
chr1 (140-211)||(22133857-22133928)
chr1 (158-211)||(21200998-21201051)
[»] scaffold0266 (1 HSPs)
scaffold0266 (132-211)||(7885-7964)
[»] scaffold0225 (1 HSPs)
scaffold0225 (132-211)||(25597-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (132-211)||(15111-15190)
scaffold0162 (132-208)||(11198-11274)
[»] chr7 (8 HSPs)
chr7 (132-211)||(7826061-7826140)
chr7 (132-211)||(27105804-27105883)
chr7 (132-211)||(27172442-27172521)
chr7 (132-211)||(4442089-4442168)
chr7 (132-211)||(17925811-17925890)
chr7 (132-211)||(13379046-13379123)
chr7 (132-211)||(13458196-13458275)
chr7 (149-210)||(15716950-15717011)
[»] chr6 (7 HSPs)
chr6 (132-211)||(16380539-16380618)
chr6 (132-211)||(23998284-23998363)
chr6 (132-211)||(1646980-1647059)
chr6 (132-211)||(16648135-16648214)
chr6 (132-211)||(14130505-14130584)
chr6 (132-211)||(23025912-23025991)
chr6 (132-206)||(16100056-16100130)
[»] chr5 (3 HSPs)
chr5 (132-211)||(23507770-23507849)
chr5 (132-211)||(21935391-21935470)
chr5 (132-211)||(24583296-24583375)
[»] chr3 (8 HSPs)
chr3 (132-207)||(15948730-15948805)
chr3 (132-211)||(30139607-30139686)
chr3 (132-211)||(30149158-30149237)
chr3 (132-211)||(8272659-8272738)
chr3 (132-211)||(13965612-13965691)
chr3 (132-211)||(15611904-15611983)
chr3 (132-211)||(6151113-6151192)
chr3 (132-211)||(25768119-25768198)
[»] chr2 (5 HSPs)
chr2 (132-211)||(24829749-24829828)
chr2 (132-208)||(25130415-25130491)
chr2 (127-211)||(22279908-22279992)
chr2 (132-211)||(24568229-24568308)
chr2 (132-211)||(22760130-22760209)
[»] scaffold0610 (1 HSPs)
scaffold0610 (132-211)||(6953-7032)
[»] scaffold0170 (1 HSPs)
scaffold0170 (132-211)||(34288-34367)
[»] scaffold0124 (1 HSPs)
scaffold0124 (132-211)||(5830-5909)
[»] scaffold0076 (1 HSPs)
scaffold0076 (132-211)||(42461-42540)
[»] chr8 (8 HSPs)
chr8 (132-211)||(16875559-16875638)
chr8 (132-211)||(20650819-20650898)
chr8 (132-211)||(21848801-21848880)
chr8 (132-211)||(23155506-23155583)
chr8 (132-211)||(22436541-22436620)
chr8 (132-211)||(21195004-21195083)
chr8 (145-211)||(23902402-23902468)
chr8 (132-211)||(16414329-16414408)
[»] chr4 (2 HSPs)
chr4 (132-211)||(15291179-15291258)
chr4 (158-211)||(12340912-12340965)
[»] scaffold0692 (1 HSPs)
scaffold0692 (132-207)||(1908-1983)
[»] scaffold0369 (1 HSPs)
scaffold0369 (132-211)||(6947-7026)
[»] scaffold0120 (1 HSPs)
scaffold0120 (132-211)||(24379-24458)
[»] scaffold0077 (1 HSPs)
scaffold0077 (132-211)||(26290-26369)
[»] scaffold0022 (1 HSPs)
scaffold0022 (132-211)||(8850-8929)
[»] scaffold1488 (1 HSPs)
scaffold1488 (132-211)||(827-906)
[»] scaffold0462 (1 HSPs)
scaffold0462 (132-211)||(2142-2221)
[»] scaffold0218 (2 HSPs)
scaffold0218 (132-211)||(1976-2055)
scaffold0218 (136-211)||(26530-26605)
[»] scaffold0021 (2 HSPs)
scaffold0021 (132-211)||(21871-21950)
scaffold0021 (132-211)||(31447-31526)
[»] scaffold0008 (2 HSPs)
scaffold0008 (132-211)||(132513-132592)
scaffold0008 (132-211)||(25970-26049)
[»] scaffold0876 (1 HSPs)
scaffold0876 (132-211)||(970-1049)
[»] scaffold0561 (1 HSPs)
scaffold0561 (132-211)||(7029-7108)
[»] scaffold0387 (1 HSPs)
scaffold0387 (132-211)||(16261-16340)
[»] scaffold0467 (1 HSPs)
scaffold0467 (132-207)||(1645-1720)
[»] scaffold0719 (1 HSPs)
scaffold0719 (154-208)||(4793-4847)
[»] scaffold0092 (1 HSPs)
scaffold0092 (143-211)||(310-378)
[»] scaffold0465 (1 HSPs)
scaffold0465 (132-190)||(13649-13707)


Alignment Details
Target: scaffold0302 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 7435 - 7356
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 7356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 493 - 414
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  493 atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 20927320 - 20927241
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 20927241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 20829485 - 20829564
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 20829564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 41215949 - 41216028
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtg 41216028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatga 201  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

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Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 20527319 - 20527240
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||| ||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20527319 atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtg 20527240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 22133857 - 22133928
Alignment:
Q  140 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtg 22133928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 21200998 - 21201051
Alignment:
Q  158 gatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||| |||||||||||||| ||||| |||||||| |||||||||    
T  21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtg 21201051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 7885 - 7964
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 7964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 25676 - 25597
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 25597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 15190 - 15111
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 15111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 11198 - 11274
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattct 208  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattct 11274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 7826140 - 7826061
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 7826061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 27105804 - 27105883
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 27105883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 27172521 - 27172442
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 27172442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 4442168 - 4442089
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtg 4442089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 17925890 - 17925811
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtg 17925811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 13379123 - 13379046
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacac--tgagtattctgtg 13379046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 13458275 - 13458196
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||| |||||||||| |||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||    
T  13458275 atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtg 13458196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 15716950 - 15717011
Alignment:
Q  149 aaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgt 210  Q
    |||||||| |||||||||||||| ||||||||||| || ||||| |||||||| ||||||||    
T  15716950 aaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgt 15717011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 16380539 - 16380618
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 16380618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 23998363 - 23998284
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 23998284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 1646980 - 1647059
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 1647059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 16648135 - 16648214
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 16648214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 14130584 - 14130505
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtg 14130505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 23025912 - 23025991
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||||||||||||||||||||    
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtg 23025991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 16100130 - 16100056
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtatt 206  Q
    |||||||||||| ||| |||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtatt 16100056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 23507849 - 23507770
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 23507770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 21935391 - 21935470
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtg 21935470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 24583375 - 24583296
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 24583296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 15948730 - 15948805
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattc 15948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 30139686 - 30139607
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 30139607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 30149237 - 30149158
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 30149158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 8272659 - 8272738
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 8272738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 13965612 - 13965691
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 13965691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 15611983 - 15611904
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 15611904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 6151113 - 6151192
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtg 6151192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 25768198 - 25768119
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| || || || |||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtg 25768119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 24829749 - 24829828
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtg 24829828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 25130491 - 25130415
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattct 208  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattct 25130415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 22279992 - 22279908
Alignment:
Q  127 tggacatcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||| |||||||||| ||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22279992 tggatatcatcagatcagagtaaagactgaatatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtg 22279908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 24568229 - 24568308
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| |||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtg 24568308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 22760130 - 22760209
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtg 22760209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 6953 - 7032
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtg 7032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 34367 - 34288
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtg 34288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 5830 - 5909
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 5909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 42540 - 42461
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtg 42461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 8e-33; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 16875559 - 16875638
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 16875638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 20650819 - 20650898
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtg 20650898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 21848801 - 21848880
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtg 21848880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 23155506 - 23155583
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacac--tgagtattctgtg 23155583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 22436620 - 22436541
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtg 22436541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 21195004 - 21195083
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| | |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtg 21195083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 23902468 - 23902402
Alignment:
Q  145 agtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  23902468 agtaaaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtg 23902402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 16414408 - 16414329
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| | ||||| |||||  |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  16414408 atcatcatactagaggaaaggtagaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtg 16414329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 15291179 - 15291258
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtg 15291258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 12340912 - 12340965
Alignment:
Q  158 gatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtg 12340965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 1908 - 1983
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattc 1983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 7026 - 6947
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtg 6947  T

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Target: scaffold0120 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 24458 - 24379
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtg 24379  T

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Target: scaffold0077 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 26290 - 26369
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtg 26369  T

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Target: scaffold0022 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 8850 - 8929
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtg 8929  T

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Target: scaffold1488 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 827 - 906
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtg 906  T

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Target: scaffold0462 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 2221 - 2142
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtg 2142  T

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Target: scaffold0218 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 1976 - 2055
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtg 2055  T

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Target: scaffold0218; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 26605 - 26530
Alignment:
Q  136 tcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||| ||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  26605 tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtg 26530  T

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Target: scaffold0021 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 21871 - 21950
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtg 21950  T

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Target: scaffold0021; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 31447 - 31526
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtg 31526  T

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Target: scaffold0008 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 132513 - 132592
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtg 132592  T

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Target: scaffold0008; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 26049 - 25970
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  26049 atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtg 25970  T

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Target: scaffold0876 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 970 - 1049
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    |||||||||||||||| ||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||||||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtg 1049  T

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Target: scaffold0561 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 7029 - 7108
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtg 7108  T

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Target: scaffold0387 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 16340 - 16261
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||||| |||||| | || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 16261  T

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Target: scaffold0467 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 1645 - 1720
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattc 207  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||| |||||||||||||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattc 1720  T

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Target: scaffold0719 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 4847 - 4793
Alignment:
Q  154 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattct 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattct 4793  T

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Target: scaffold0092 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 378 - 310
Alignment:
Q  143 agagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtg 211  Q
    ||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtg 310  T

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Target: scaffold0465 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  132 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtat 190  Q
    |||||||||||| ||| |||||  |||||||||||||||||||||||||||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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