View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0361_high_16 (Length: 232)
Name: NF0361_high_16
Description: NF0361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0361_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 4647575 - 4647738
Alignment:
| Q |
1 |
ctcacaaaagtaaccttaccatagaagtaaaaccagaagcaacttcaaaataagtagatggacaggatagatagagtgaaaaaagagaaaactttgaaaa |
100 |
Q |
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| T |
4647575 |
ctcacaaaagtaaccttaccatataagtaaaaccagaatcaacttcaaaataagttgatggacaggatagatagagtgaaaaaagagaaaactttgaaaa |
4647674 |
T |
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| Q |
101 |
ctaattcttaatacatttctactcatttcaccattactaatttgacacattgcctttactttct |
164 |
Q |
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| T |
4647675 |
ctaattcttaatacatttctactcatttcaccattactaatttgacacattgcctttactttct |
4647738 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 4643731 - 4643772
Alignment:
| Q |
10 |
gtaaccttaccatagaagtaaaaccagaagcaacttcaaaat |
51 |
Q |
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| T |
4643731 |
gtaaccttaccatataagtaaaaccagaatcaacctcaaaat |
4643772 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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