View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0361_high_4 (Length: 458)
Name: NF0361_high_4
Description: NF0361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0361_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 13 - 429
Target Start/End: Original strand, 39373367 - 39373783
Alignment:
| Q |
13 |
aaaatcaaaagaagagttatactaaccagtgtctcgaagaaaccggttaaggaagttataaaaaacaatattgcgaaactaaggtgttccaagctaaaaa |
112 |
Q |
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||||||||||||||||||||||||||||||||| | |||| | |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
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| T |
39373367 |
aaaatcaaaagaagagttatactaaccagtgtcccaaagacatcggttaaggaagttataaaaaataatattgcgaaactaaggtgttccaaactaaaaa |
39373466 |
T |
|
| Q |
113 |
ctgaaggaggccgtggacaaattcgaagagaggttaaaatgcgagatcaatcttctaatgataacaatccaagaatccgtttcaaaaataacttgagata |
212 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
39373467 |
ttgaaggaggccgtgaacaaattcgaagagaggttaaaatgcgagatcaatcttctaatgacaacaatccaagaatccgtttcaaaaataacttgagata |
39373566 |
T |
|
| Q |
213 |
aatccagactaccataacatggaggagcctaaagggagcgattctttaacatgtatccgcatgtacggagctaccgataagaaatcaaacactacataaa |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
39373567 |
aatccagactaccataacatggaggagcctaaagggagcgattctttaacatgtatccgcatgtatggagctaccgataagaaatcaaacactacataaa |
39373666 |
T |
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| Q |
313 |
tttgtttatttgtgtatgttaaacgagacagtgaagctgacatttatgtacccaacagtttctgtactgcatcatgtttgaacatatatggtaaactaaa |
412 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
39373667 |
tttgtttatttgtgtatgctaaacgagacagtgaagctgacatttatgtacccaacagtttctgtactgcatcatgtttcgacatatatggtaaactaaa |
39373766 |
T |
|
| Q |
413 |
gtatgccaattataaag |
429 |
Q |
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| T |
39373767 |
gtatgccaattataaag |
39373783 |
T |
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