View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0361_low_10 (Length: 354)
Name: NF0361_low_10
Description: NF0361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0361_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 30 - 301
Target Start/End: Complemental strand, 49035222 - 49034951
Alignment:
| Q |
30 |
tccttctcacagcctttagcctttcatctgaagcaaaaaactaaaacacaccaaacttatagcatacaaaaaggatcatttttatcttatgctcgctcta |
129 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49035222 |
tccttctcacagcctttagcctttcatctgaagcaaaaaactaaaacacaccaaacttatagcatacaaaaaggatcatttttatcttatgctcgctcta |
49035123 |
T |
|
| Q |
130 |
catgagtgnnnnnnnnnnnnatttcgaaaagcaatgctaaaacttgttataacaaaactacaatacaagccttttaaattttaatgcactcacacgtttt |
229 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49035122 |
catgagtgttttttctttttatttcgaaaagcaatgctaaaacttgttataacaaaactacaatacaagccttttaaattttaatgcactcacacgtttt |
49035023 |
T |
|
| Q |
230 |
agttagttataacaaggagttgaatattatttgtaccatgtgttcagtcctgcaaagtccaattccttgtgc |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49035022 |
agttagttataacaaggagttgaatattatttgtaccatgtgttcagtcctgcaaagtccaattccttgtgc |
49034951 |
T |
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