View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0361_low_21 (Length: 294)

Name: NF0361_low_21
Description: NF0361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0361_low_21
NF0361_low_21
[»] chr6 (46 HSPs)
chr6 (146-294)||(14036664-14036810)
chr6 (146-204)||(14035372-14035430)
chr6 (207-294)||(15448429-15448524)
chr6 (207-294)||(20182189-20182284)
chr6 (207-294)||(22153707-22153802)
chr6 (207-294)||(24661009-24661104)
chr6 (207-294)||(28668144-28668239)
chr6 (210-294)||(25398046-25398138)
chr6 (207-294)||(9893007-9893102)
chr6 (205-252)||(30833958-30834005)
chr6 (207-294)||(495627-495722)
chr6 (207-294)||(1939242-1939337)
chr6 (207-294)||(2669353-2669448)
chr6 (207-294)||(6598508-6598603)
chr6 (207-294)||(15364458-15364553)
chr6 (207-294)||(15509200-15509295)
chr6 (207-294)||(16250802-16250897)
chr6 (207-294)||(22579349-22579444)
chr6 (207-294)||(28364955-28365050)
chr6 (207-252)||(5250233-5250278)
chr6 (207-252)||(6605496-6605541)
chr6 (207-252)||(26224522-26224567)
chr6 (208-252)||(5360503-5360547)
chr6 (207-247)||(12160847-12160887)
chr6 (205-294)||(26939631-26939728)
chr6 (207-294)||(13145046-13145128)
chr6 (208-247)||(27796835-27796874)
chr6 (207-294)||(11049751-11049846)
chr6 (207-252)||(8844168-8844213)
chr6 (207-252)||(15961407-15961452)
chr6 (207-252)||(21990175-21990220)
chr6 (249-294)||(27705466-27705511)
chr6 (208-252)||(10458858-10458902)
chr6 (207-294)||(18033526-18033620)
chr6 (210-290)||(11077697-11077785)
chr6 (210-294)||(21140983-21141075)
chr6 (207-246)||(33191180-33191219)
chr6 (207-294)||(2992659-2992754)
chr6 (207-294)||(6978321-6978416)
chr6 (206-252)||(12200788-12200834)
chr6 (207-294)||(12351586-12351681)
chr6 (207-294)||(12951752-12951847)
chr6 (207-294)||(18492413-18492508)
chr6 (207-252)||(9885337-9885382)
chr6 (207-252)||(14886655-14886700)
chr6 (146-194)||(14037148-14037196)
[»] chr5 (37 HSPs)
chr5 (208-294)||(17771969-17772063)
chr5 (207-294)||(7003730-7003825)
chr5 (207-294)||(4125188-4125283)
chr5 (207-294)||(16631874-16631969)
chr5 (207-294)||(28265475-28265570)
chr5 (207-294)||(36196438-36196533)
chr5 (207-253)||(40484137-40484183)
chr5 (207-294)||(35620344-35620438)
chr5 (206-294)||(15061017-15061113)
chr5 (207-294)||(618338-618433)
chr5 (207-294)||(746868-746963)
chr5 (207-294)||(2472714-2472809)
chr5 (207-294)||(8108860-8108955)
chr5 (206-252)||(12045821-12045867)
chr5 (207-294)||(16121839-16121934)
chr5 (207-294)||(38837671-38837766)
chr5 (206-247)||(29727894-29727935)
chr5 (207-294)||(8886851-8886946)
chr5 (207-294)||(10494781-10494876)
chr5 (207-294)||(12328226-12328321)
chr5 (207-294)||(17039631-17039726)
chr5 (207-294)||(20187941-20188036)
chr5 (207-294)||(26708585-26708680)
chr5 (207-294)||(26978319-26978414)
chr5 (207-252)||(5982740-5982785)
chr5 (207-252)||(7888891-7888936)
chr5 (207-252)||(13620127-13620172)
chr5 (206-294)||(23409024-23409121)
chr5 (216-294)||(23975679-23975765)
chr5 (207-252)||(25652583-25652628)
chr5 (207-243)||(13974078-13974114)
chr5 (207-246)||(19890986-19891025)
chr5 (207-246)||(36716200-36716239)
chr5 (207-294)||(33818561-33818656)
chr5 (207-247)||(27428012-27428052)
chr5 (250-294)||(33816809-33816853)
chr5 (207-243)||(36831890-36831926)
[»] chr8 (50 HSPs)
chr8 (207-294)||(4331020-4331115)
chr8 (207-294)||(11938787-11938881)
chr8 (207-294)||(19240909-19241004)
chr8 (207-294)||(19314093-19314188)
chr8 (207-294)||(19488061-19488156)
chr8 (207-294)||(24193196-24193291)
chr8 (207-294)||(24576024-24576119)
chr8 (207-294)||(8555304-8555399)
chr8 (207-294)||(16061939-16062034)
chr8 (207-294)||(18010060-18010155)
chr8 (207-294)||(30687978-30688073)
chr8 (207-294)||(32247951-32248046)
chr8 (203-252)||(21219236-21219285)
chr8 (207-252)||(25274689-25274734)
chr8 (207-252)||(27910764-27910809)
chr8 (207-252)||(27957183-27957228)
chr8 (207-252)||(29345163-29345208)
chr8 (207-252)||(30466954-30466999)
chr8 (207-252)||(43431559-43431604)
chr8 (207-247)||(29351021-29351061)
chr8 (207-246)||(8824923-8824962)
chr8 (207-283)||(25655858-25655942)
chr8 (207-246)||(27869336-27869375)
chr8 (207-291)||(33652612-33652704)
chr8 (207-294)||(4647755-4647850)
chr8 (207-294)||(19256254-19256349)
chr8 (207-294)||(21350520-21350615)
chr8 (207-294)||(31399508-31399603)
chr8 (207-252)||(3823225-3823270)
chr8 (207-252)||(17810390-17810435)
chr8 (207-252)||(25000431-25000476)
chr8 (207-252)||(32961751-32961796)
chr8 (207-247)||(25273328-25273368)
chr8 (209-252)||(9915043-9915086)
chr8 (207-294)||(24636694-24636790)
chr8 (207-294)||(10917869-10917964)
chr8 (207-294)||(17824616-17824711)
chr8 (207-294)||(22939355-22939450)
chr8 (207-294)||(23752286-23752381)
chr8 (207-294)||(40289421-40289516)
chr8 (207-252)||(9631496-9631541)
chr8 (207-252)||(13060931-13060976)
chr8 (207-252)||(15251693-15251738)
chr8 (207-252)||(24479813-24479858)
chr8 (207-244)||(33412977-33413013)
chr8 (207-252)||(42700657-42700702)
chr8 (206-246)||(6816382-6816422)
chr8 (250-294)||(8789882-8789926)
chr8 (214-246)||(14304327-14304359)
chr8 (250-294)||(31344223-31344267)
[»] chr7 (36 HSPs)
chr7 (207-294)||(23539276-23539371)
chr7 (205-294)||(23699823-23699920)
chr7 (206-294)||(28800922-28801018)
chr7 (207-294)||(22486438-22486533)
chr7 (205-294)||(24605882-24605979)
chr7 (207-294)||(1842938-1843033)
chr7 (207-294)||(2650828-2650923)
chr7 (207-294)||(3872187-3872282)
chr7 (207-294)||(6849211-6849306)
chr7 (207-253)||(9698538-9698584)
chr7 (207-294)||(11036551-11036646)
chr7 (207-294)||(18217873-18217968)
chr7 (207-294)||(21917334-21917429)
chr7 (207-294)||(23577189-23577284)
chr7 (207-294)||(48933180-48933275)
chr7 (207-252)||(2093362-2093407)
chr7 (207-252)||(3904478-3904523)
chr7 (207-294)||(7733312-7733407)
chr7 (207-294)||(15014405-15014500)
chr7 (207-294)||(20174064-20174159)
chr7 (207-294)||(23232083-23232178)
chr7 (207-294)||(27806062-27806157)
chr7 (207-294)||(31425511-31425606)
chr7 (207-294)||(37135285-37135380)
chr7 (207-294)||(47523650-47523745)
chr7 (207-252)||(1907449-1907494)
chr7 (207-252)||(23750736-23750781)
chr7 (249-294)||(45664812-45664857)
chr7 (207-247)||(33427788-33427828)
chr7 (250-294)||(39979675-39979719)
chr7 (207-294)||(20429509-20429604)
chr7 (207-240)||(687972-688005)
chr7 (211-252)||(2457762-2457803)
chr7 (207-252)||(21623115-21623159)
chr7 (207-252)||(42926419-42926464)
chr7 (250-294)||(36636550-36636594)
[»] chr4 (37 HSPs)
chr4 (207-294)||(9670479-9670574)
chr4 (206-294)||(27040024-27040120)
chr4 (207-294)||(4586758-4586853)
chr4 (207-294)||(44783525-44783620)
chr4 (205-294)||(5473891-5473988)
chr4 (207-294)||(55309212-55309308)
chr4 (207-294)||(2275677-2275773)
chr4 (207-253)||(13564915-13564961)
chr4 (207-294)||(19680424-19680519)
chr4 (207-294)||(19839221-19839316)
chr4 (207-294)||(22168310-22168405)
chr4 (207-294)||(45532579-45532674)
chr4 (207-252)||(7111946-7111991)
chr4 (207-294)||(9238625-9238720)
chr4 (208-283)||(24682328-24682411)
chr4 (207-294)||(32175737-32175832)
chr4 (207-294)||(46286229-46286324)
chr4 (207-252)||(30268988-30269033)
chr4 (207-252)||(30283156-30283201)
chr4 (249-294)||(37378673-37378718)
chr4 (207-252)||(38619939-38619984)
chr4 (207-252)||(38645842-38645887)
chr4 (207-252)||(45091353-45091398)
chr4 (208-252)||(4627079-4627123)
chr4 (207-294)||(9058952-9059047)
chr4 (207-294)||(12072004-12072099)
chr4 (207-294)||(13028816-13028911)
chr4 (207-294)||(18714944-18715039)
chr4 (207-294)||(29625367-29625462)
chr4 (207-294)||(42055439-42055534)
chr4 (207-252)||(25026649-25026694)
chr4 (207-240)||(25225201-25225234)
chr4 (207-252)||(30420033-30420078)
chr4 (249-294)||(30568049-30568094)
chr4 (207-252)||(54539378-54539423)
chr4 (207-247)||(4606829-4606869)
chr4 (250-294)||(30508029-30508073)
[»] chr3 (56 HSPs)
chr3 (207-294)||(3461310-3461405)
chr3 (207-294)||(21816761-21816856)
chr3 (207-294)||(8546285-8546380)
chr3 (207-294)||(18104530-18104625)
chr3 (207-294)||(29956412-29956507)
chr3 (207-294)||(30005567-30005662)
chr3 (207-294)||(48404900-48404995)
chr3 (204-294)||(43329760-43329858)
chr3 (207-294)||(1745488-1745582)
chr3 (205-294)||(11219178-11219275)
chr3 (207-294)||(5260977-5261072)
chr3 (207-294)||(8110379-8110474)
chr3 (206-252)||(10772052-10772098)
chr3 (207-294)||(13921365-13921460)
chr3 (207-294)||(19269864-19269959)
chr3 (207-294)||(26098853-26098948)
chr3 (207-294)||(27449128-27449223)
chr3 (207-252)||(7623531-7623576)
chr3 (208-294)||(11915798-11915892)
chr3 (214-294)||(18539844-18539932)
chr3 (207-294)||(8428211-8428306)
chr3 (207-294)||(9652618-9652713)
chr3 (206-252)||(18091546-18091592)
chr3 (207-294)||(19223489-19223584)
chr3 (207-294)||(26390634-26390729)
chr3 (207-252)||(18380114-18380159)
chr3 (207-252)||(25882660-25882705)
chr3 (207-252)||(29236134-29236179)
chr3 (216-294)||(29704041-29704127)
chr3 (250-294)||(17582352-17582396)
chr3 (202-294)||(10941660-10941760)
chr3 (207-246)||(36543845-36543884)
chr3 (207-246)||(36564439-36564478)
chr3 (207-294)||(1310959-1311054)
chr3 (209-247)||(11386430-11386468)
chr3 (207-294)||(13905038-13905133)
chr3 (207-294)||(15063992-15064087)
chr3 (207-294)||(17762682-17762777)
chr3 (207-294)||(19064002-19064097)
chr3 (207-294)||(19610378-19610473)
chr3 (206-252)||(20761949-20761995)
chr3 (207-294)||(23773517-23773612)
chr3 (207-252)||(5565812-5565857)
chr3 (249-294)||(6718750-6718795)
chr3 (249-294)||(10803760-10803805)
chr3 (207-252)||(11007683-11007728)
chr3 (205-242)||(17269602-17269639)
chr3 (249-294)||(19545550-19545595)
chr3 (207-248)||(20088499-20088540)
chr3 (207-252)||(21020155-21020200)
chr3 (207-252)||(46942577-46942622)
chr3 (207-252)||(47263265-47263310)
chr3 (206-246)||(11837213-11837253)
chr3 (250-294)||(16299901-16299945)
chr3 (250-294)||(17269655-17269699)
chr3 (250-294)||(26830493-26830537)
[»] chr2 (30 HSPs)
chr2 (205-294)||(23857956-23858052)
chr2 (206-294)||(37552267-37552363)
chr2 (207-294)||(22140364-22140459)
chr2 (207-294)||(41736212-41736307)
chr2 (208-294)||(28319580-28319674)
chr2 (205-294)||(20065072-20065169)
chr2 (205-294)||(32300491-32300588)
chr2 (207-294)||(44476375-44476470)
chr2 (207-252)||(12779690-12779735)
chr2 (207-294)||(32008992-32009088)
chr2 (206-294)||(13613092-13613188)
chr2 (205-252)||(32185922-32185969)
chr2 (207-294)||(13788055-13788150)
chr2 (207-294)||(15636735-15636830)
chr2 (207-294)||(18551253-18551348)
chr2 (207-294)||(21293711-21293806)
chr2 (207-294)||(27039908-27040003)
chr2 (207-294)||(28841342-28841437)
chr2 (207-294)||(41637658-41637753)
chr2 (207-294)||(43408511-43408606)
chr2 (207-252)||(7093658-7093703)
chr2 (207-252)||(37723992-37724037)
chr2 (214-294)||(1141576-1141664)
chr2 (206-294)||(8430336-8430432)
chr2 (207-242)||(44723032-44723067)
chr2 (207-245)||(26243321-26243359)
chr2 (207-252)||(16098917-16098962)
chr2 (208-294)||(23388379-23388473)
chr2 (210-246)||(28262460-28262496)
chr2 (250-294)||(31266394-31266438)
[»] chr1 (39 HSPs)
chr1 (207-294)||(50092298-50092393)
chr1 (207-294)||(12720853-12720948)
chr1 (207-294)||(15243129-15243224)
chr1 (207-294)||(22158846-22158941)
chr1 (207-294)||(46790044-46790139)
chr1 (208-294)||(25787998-25788092)
chr1 (207-294)||(6459261-6459356)
chr1 (207-294)||(9109975-9110070)
chr1 (207-294)||(20408160-20408255)
chr1 (207-294)||(28229455-28229550)
chr1 (207-294)||(45839336-45839431)
chr1 (207-252)||(8940994-8941039)
chr1 (207-252)||(12369951-12369996)
chr1 (207-252)||(48522612-48522657)
chr1 (207-247)||(29549517-29549557)
chr1 (206-294)||(52183722-52183818)
chr1 (207-294)||(4340451-4340546)
chr1 (207-294)||(6412053-6412148)
chr1 (207-294)||(12161858-12161953)
chr1 (207-294)||(19865288-19865383)
chr1 (207-294)||(22603592-22603687)
chr1 (207-294)||(23457941-23458036)
chr1 (207-294)||(27253855-27253950)
chr1 (207-294)||(46339445-46339540)
chr1 (207-294)||(50845330-50845425)
chr1 (207-294)||(51973468-51973563)
chr1 (207-252)||(7181555-7181600)
chr1 (249-294)||(9464147-9464192)
chr1 (207-252)||(20290321-20290366)
chr1 (207-252)||(46865337-46865382)
chr1 (213-294)||(46785964-46786053)
chr1 (207-246)||(41120737-41120776)
chr1 (206-244)||(9177202-9177240)
chr1 (207-294)||(17200010-17200105)
chr1 (206-252)||(41752527-41752573)
chr1 (207-252)||(9985327-9985372)
chr1 (207-252)||(38531170-38531215)
chr1 (214-246)||(18890556-18890588)
chr1 (207-247)||(18894900-18894940)
[»] scaffold0007 (3 HSPs)
scaffold0007 (207-294)||(202818-202913)
scaffold0007 (207-294)||(3786-3881)
scaffold0007 (206-252)||(274664-274710)
[»] scaffold0062 (1 HSPs)
scaffold0062 (207-246)||(44017-44056)
[»] scaffold0576 (1 HSPs)
scaffold0576 (207-294)||(9229-9324)
[»] scaffold0240 (1 HSPs)
scaffold0240 (207-294)||(14990-15085)
[»] scaffold0219 (1 HSPs)
scaffold0219 (207-294)||(19647-19742)
[»] scaffold0108 (1 HSPs)
scaffold0108 (207-294)||(12696-12791)
[»] scaffold0014 (1 HSPs)
scaffold0014 (207-294)||(22255-22350)
[»] scaffold0599 (1 HSPs)
scaffold0599 (208-294)||(7549-7643)
[»] scaffold0009 (2 HSPs)
scaffold0009 (208-294)||(182574-182668)
scaffold0009 (206-252)||(219730-219776)
[»] scaffold0717 (1 HSPs)
scaffold0717 (207-294)||(918-1014)
[»] scaffold0023 (1 HSPs)
scaffold0023 (207-246)||(39703-39742)
[»] scaffold0655 (1 HSPs)
scaffold0655 (207-294)||(3162-3257)
[»] scaffold0603 (1 HSPs)
scaffold0603 (207-294)||(5979-6074)
[»] scaffold0128 (1 HSPs)
scaffold0128 (207-294)||(10663-10758)
[»] scaffold0006 (1 HSPs)
scaffold0006 (211-294)||(84678-84769)
[»] scaffold0001 (3 HSPs)
scaffold0001 (207-294)||(84347-84442)
scaffold0001 (207-294)||(8110-8205)
scaffold0001 (207-294)||(21842-21937)
[»] scaffold0011 (1 HSPs)
scaffold0011 (207-252)||(17617-17662)
[»] scaffold0554 (1 HSPs)
scaffold0554 (207-246)||(9910-9949)
[»] scaffold0161 (1 HSPs)
scaffold0161 (210-252)||(6889-6931)
[»] scaffold0076 (1 HSPs)
scaffold0076 (207-294)||(26527-26622)
[»] scaffold0047 (1 HSPs)
scaffold0047 (207-294)||(58626-58721)
[»] scaffold0002 (1 HSPs)
scaffold0002 (207-294)||(440007-440102)


Alignment Details
Target: chr6 (Bit Score: 118; Significance: 3e-60; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 146 - 294
Target Start/End: Complemental strand, 14036810 - 14036664
Alignment:
Q  146 ttagtctggacccatttatgttttgagtcacgaccattcaattcatttgagttgtttccagcactactagaaaaagaaaaattagcgagggaaattagtg 245  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  14036810 ttagtctggacccatttatgtt--gagtcacgaccattcaattcatttgggttgtttccagcactactaaaaaaaggaaaattagcgagggaaattagtg 14036713  T
Q  246 acagaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||    
T  14036712 acagaaattcctcacaaattccatgatcgcaaaatttaatgacagaatt 14036664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 14035430 - 14035372
Alignment:
Q  146 ttagtctggacccatttatgttttgagtcacgaccattcaattcatttgagttgtttcc 204  Q
    |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  14035430 ttagtctggacccatttatgttttgagtcatgaccgttcaattcttttgagttgtttcc 14035372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 15448524 - 15448429
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| | ||||||||||||||||||||||||    
T  15448524 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttaatgacggaatt 15448429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 20182284 - 20182189
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  20182284 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaatt 20182189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 22153707 - 22153802
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  22153707 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaatt 22153802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 24661009 - 24661104
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||||||||||||||    
T  24661009 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaatt 24661104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 28668239 - 28668144
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||        ||||||| ||||||| ||||||||||||||||||||||||||    
T  28668239 cactactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacggaatt 28668144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 25398138 - 25398046
Alignment:
Q  210 tactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  25398138 tactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 25398046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 9893102 - 9893007
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  9893102 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 9893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 30833958 - 30834005
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  30833958 agcactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 30834005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 495627 - 495722
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||| |||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  495627 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 495722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 1939242 - 1939337
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| |||||   || |||||||||||||||||||||||    
T  1939242 cactactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaattttttggtcgcaaaatttaatgacggaatt 1939337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 2669448 - 2669353
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||| |||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  2669448 cactactagaaaaagcaaaattaacgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 2669353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 6598603 - 6598508
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  6598603 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattacttggtcgcaaaatttagtgacggaatt 6598508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 15364458 - 15364553
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  15364458 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 15364553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 15509295 - 15509200
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||| ||||||||||||||||||||||||||||||||||         ||||||||||| ||||| |||| ||| |||||||| ||||||||||    
T  15509295 cactaccagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcggaaaatttagtgacggaatt 15509200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 16250802 - 16250897
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||| |||||||||||||||||         ||||||||||| ||||| ||||||||||||||||| |||| |||||    
T  16250802 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacagaatt 16250897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 22579349 - 22579444
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| |||||||||||||||||||||||||         ||||||||||| |||||| ||| |||||||||||| ||||||||||    
T  22579349 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaatt 22579444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 28365050 - 28364955
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  28365050 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatt 28364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 5250278 - 5250233
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  5250278 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaa 5250233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 6605496 - 6605541
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  6605496 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 6605541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 26224567 - 26224522
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  26224567 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 26224522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 5360547 - 5360503
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||    
T  5360547 actactagaaaaagcaaaattagcgagggaaattagtgacggaaa 5360503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 12160847 - 12160887
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  12160847 cactactagaaaaagtaaaattagcgagggaaattagtgac 12160887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 26939728 - 26939631
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgaca--------gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||| |||||||  |||||||||||||||||        ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  26939728 agcactactagaaaaagtaaaattactgagggaaattagtgacaaaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 26939631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 13145128 - 13145046
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||||||| |||||||||||  |      ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  13145128 cactactagaaaaagaaaaatcagcgagggaaaaaat-----gaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 13145046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 247
Target Start/End: Original strand, 27796835 - 27796874
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  27796835 actactagaaaaagcaaaattagcgagggaaattagtgac 27796874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 11049751 - 11049846
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  ||||||||| |||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  11049751 cactactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 11049846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 8844168 - 8844213
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||    
T  8844168 cactactagaaaaagaaaaatcagggagggaaattagtgacggaaa 8844213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 15961407 - 15961452
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  15961407 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaa 15961452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 21990175 - 21990220
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||    
T  21990175 cactactagaaaaagcaaaattagcgagggaaattaatgacggaaa 21990220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 27705511 - 27705466
Alignment:
Q  249 gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  27705511 gaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 27705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 10458902 - 10458858
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||    
T  10458902 actactagaaaaagtaaaattagtgagggaaattagtgacggaaa 10458858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 18033526 - 18033620
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa-------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||| ||||| |||||||| |||||||||| ||||| ||||       ||||||| ||||||| || |||||||||||| ||||||||||    
T  18033526 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaacattaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 18033620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 11077785 - 11077697
Alignment:
Q  210 tactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacgg 290  Q
    ||||||||||||||||||||| |||||||||| ||||| |        |||||||||| ||||||| || |||||||||||| ||||||    
T  11077785 tactagaaaaagaaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacgg 11077697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 21141075 - 21140983
Alignment:
Q  210 tactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||| ||||||| |||||||||||||||||         ||||||||||  ||||| |||| |||||||||||| ||||||||||    
T  21141075 tactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcccaaatttcatggtcgcaaaatttagtgacggaatt 21140983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 33191219 - 33191180
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  33191219 cactattagaaaaagcaaaattagcgagggaaattagtga 33191180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 2992754 - 2992659
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||| ||||| | ||||||||||||||||||||||  ||||        ||||||| ||||||| || |||||||||||| ||||||||||    
T  2992754 cactactaggaaaagcataattagcgagggaaattagtgatggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 2992659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 6978416 - 6978321
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||| ||||| |||||||||||||||||||||| || ||||        ||||||| ||||||| || |||||||||||| ||||||||||    
T  6978416 cactattaggaaaagcaaaattagcgagggaaattagttacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 6978321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 12200834 - 12200788
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||| |||||||||| |||||||| |||||||||||||||| ||||    
T  12200834 gcactgctagaaaaagcaaaattagtgagggaaattagtgacggaaa 12200788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 12351586 - 12351681
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| | |||||  |||||||||||||||| ||||        ||||||| ||||||| |  |||||||||||||||||||||||    
T  12351586 cactactagaaaaagtataattaaggagggaaattagtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttaatgacggaatt 12351681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 12951847 - 12951752
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||| ||||| |||||||| |||||||||| ||||| ||||        || |||| ||||||| || |||||||||||||||||||||||    
T  12951847 cactactaggaaaagcaaaattagagagggaaatttgtgacggaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaatt 12951752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 18492508 - 18492413
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||| |||||||||| ||||||||||| | ||||||||||| ||||        || |||| |||||||||| |||||||||||| ||||||||||    
T  18492508 cactgctagaaaaagcaaaattagcgatgcaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgcaaaatttagtgacggaatt 18492413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 9885382 - 9885337
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||| || |||||||||||||||| ||||    
T  9885382 cactactagaaaaagcaaaatcagggagggaaattagtgacggaaa 9885337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 14886700 - 14886655
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||| |||||||| |||||||| |||| ||||||||||||||||    
T  14886700 cactaccagaaaaagcaaaattagggaggaaaattagtgacagaaa 14886655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 14037196 - 14037148
Alignment:
Q  146 ttagtctggacccatttatgttttgagtcacgaccattcaattcatttg 194  Q
    ||||| |||||||||||||||||||||||| || | |||||||| ||||    
T  14037196 ttagtttggacccatttatgttttgagtcatgatcgttcaattcttttg 14037148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 17771969 - 17772063
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||        ||||||||||||||| ||||||||||||||| ||||||||||    
T  17771969 actactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcaaaaattccttgatcgcaaaatttagtgacggaatt 17772063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 7003730 - 7003825
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||        ||||||| ||||||||||||||||||||||| ||||||||||    
T  7003730 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaattccatgatcgcaaaatttagtgacggaatt 7003825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 4125188 - 4125283
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  4125188 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 4125283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 16631874 - 16631969
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||||||||||||||||||||||||         ||||||||||| ||||||| || || ||||||||| ||||||||||    
T  16631874 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaatt 16631969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 28265475 - 28265570
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||         ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  28265475 cactactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 28265570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 36196533 - 36196438
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||| |||||| |||||||||||| ||||||||||    
T  36196533 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaaatccatggtcgcaaaatttagtgacggaatt 36196438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 40484183 - 40484137
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaat 253  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  40484183 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaat 40484137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 35620344 - 35620438
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac-------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| |||||||||||||||||||||||||       | |||||||||| ||||||| || |||||||||||| ||||||||||    
T  35620344 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 35620438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 15061113 - 15061017
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||| |||||||| |||||||||||||||||||||||||         ||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  15061113 gcactaccagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 15061017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 618433 - 618338
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  618433 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 618338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 746868 - 746963
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||| |||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  746868 cactacaagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 746963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 2472714 - 2472809
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| || ||||||||||||| ||||        ||||||| ||||||| || |||||||||||||||||||||||    
T  2472714 cactactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaatt 2472809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 8108860 - 8108955
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  8108860 cactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 8108955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 12045867 - 12045821
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12045867 gcactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 12045821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 16121839 - 16121934
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||||||||||||||| |        |||||||||| ||||||| || || ||||||||| ||||||||||    
T  16121839 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcacaaaatttagtgacggaatt 16121934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 38837671 - 38837766
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||| ||||||    
T  38837671 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaatt 38837766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 29727894 - 29727935
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  29727894 gcactactagaaaaagtaaaattagcgagggaaattagtgac 29727935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 8886851 - 8886946
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgaca--------gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| ||||| |||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  8886851 cactactagaaaaagcaaaattagcgaggaaaatttgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 8886946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 10494876 - 10494781
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||  |||||||||||||||||||| ||||        ||||||| ||||||| || |||||||||||| ||||||||||    
T  10494876 cactactagaaaaagcaaatgtagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 10494781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 12328226 - 12328321
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||| ||         ||||||||||| ||||| | ||||||||||||||| ||||||||||    
T  12328226 cactactagaaaaagcaaaattagtgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaatt 12328321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 17039631 - 17039726
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| |||| |||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  17039631 cactactagaaaaagcaaaattagtgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 17039726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 20187941 - 20188036
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||| ||||        ||||||| ||||||| |||||||||||||||||||| |||||    
T  20187941 cactattagcaaaagcaaaattagcgaaggaaattagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacagaatt 20188036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 26708585 - 26708680
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtg--------acagaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||| | |||||||||||||||||||||||        |  ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  26708585 cactactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 26708680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 26978319 - 26978414
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtg--------acagaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||| | |||||||||||||||||||||||        |  ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  26978319 cactactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 26978414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 5982785 - 5982740
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  5982785 cactactagaaaaagcaaaatcagcgagggaaattagtgacggaaa 5982740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 7888936 - 7888891
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||    
T  7888936 cactactagaaaaagcaaaattagcgagggaaattattgacggaaa 7888891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 13620127 - 13620172
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||    
T  13620127 cactactagaaaaagaaaaatcagggagggaaattagtgacggaaa 13620172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 23409121 - 23409024
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgac---------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||| ||||||||||||  |||||||||||          ||||||||||| ||||| | ||||||||||||||| ||||||||||    
T  23409121 gcactactagaaaaagcaaaattagcgagaaaaattagtgacggaaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaatt 23409024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 23975765 - 23975679
Alignment:
Q  216 aaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||| ||||||||||||||||||||||||| ||||        ||||||| ||||| |||| |||||||||||| ||||||||||    
T  23975765 aaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 23975679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 25652583 - 25652628
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||    
T  25652583 cactattagaaaaagcaaaattagcgagggaaatcagtgacagaaa 25652628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 13974078 - 13974114
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattag 243  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13974078 cactactagaaaaagcaaaattagcgagggaaattag 13974114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 19890986 - 19891025
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  19890986 cactattagaaaaagcaaaattagcgagggaaattagtga 19891025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 36716200 - 36716239
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  36716200 cactactagaaaaaacaaaattagcgagggaaattagtga 36716239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 33818561 - 33818656
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||| | |||||||||| ||||| ||||        ||||||| ||||||| || |||||||||||| ||||||||||    
T  33818561 cactactagaaaaagcaaaattggggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 33818656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 27428012 - 27428052
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    ||||||||  |||||||||||||| ||||||||||||||||    
T  27428012 cactactaataaaagaaaaattagggagggaaattagtgac 27428052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 33816809 - 33816853
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| ||||||| || |||||||||||| ||||||||||    
T  33816809 aaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 33816853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 36831890 - 36831926
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattag 243  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  36831890 cactactagaaaaagcaaaattagtgagggaaattag 36831926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 4331115 - 4331020
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  4331115 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 4331020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 11938881 - 11938787
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac-------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||        ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  11938881 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 11938787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 19241004 - 19240909
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  19241004 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 19240909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 19314188 - 19314093
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  19314188 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 19314093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 19488061 - 19488156
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  19488061 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 19488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 24193196 - 24193291
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  24193196 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 24193291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 24576024 - 24576119
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  24576024 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 24576119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 8555304 - 8555399
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  8555304 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatt 8555399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 16061939 - 16062034
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| |||||| ||| ||||||||| || ||||||||||    
T  16061939 cactactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatgtagtgacggaatt 16062034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 18010060 - 18010155
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||| |||||||| |||||||||||| |||||||||||| ||||        ||||||| ||||||| ||||||||||||||| ||||||||||    
T  18010060 cactaccagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaatt 18010155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 30688073 - 30687978
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||| ||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  30688073 cactactagaaaaagcaaaattagcgagggaaatcagtgaccgaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 30687978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 32248046 - 32247951
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||| |||||||||||||||||         ||||||||||| |||||| ||| |||||||||||| ||||||||||    
T  32248046 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaatt 32247951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 21219236 - 21219285
Alignment:
Q  203 ccagcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  21219236 ccagcactactagaaaaagaaaaatcagcgagagaaattagtgacggaaa 21219285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 25274734 - 25274689
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  25274734 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 25274689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 27910764 - 27910809
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  27910764 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 27910809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 27957183 - 27957228
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  27957183 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 27957228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 29345208 - 29345163
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  29345208 cactactagaaaaagaaaaattagggagggaaattagtgacggaaa 29345163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 30466954 - 30466999
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  30466954 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 30466999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 43431559 - 43431604
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  43431559 cactactagaaaaagaaaaattagtgagggaaattagtgacggaaa 43431604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 29351061 - 29351021
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  29351061 cactactagaaaaagcaaaattagcgagggaaattagtgac 29351021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 8824962 - 8824923
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  8824962 cactactagaaaaagcaaaattagcgagggaaattagtga 8824923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 25655858 - 25655942
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaattta 283  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| |||||||||| ||||||||||||    
T  25655858 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaattta 25655942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 27869375 - 27869336
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27869375 cactactagaaaaagcaaaattagcgagggaaattagtga 27869336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 33652704 - 33652612
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacgga 291  Q
    |||||| |||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| |||||||    
T  33652704 cactaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgga 33652612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 4647755 - 4647850
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  |||||||||||||||||||||||||         ||||||||||| ||||| |||  |||||||||||| ||||||||||    
T  4647755 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaatt 4647850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 19256349 - 19256254
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |        |||||||||| ||||| | || |||||||||||| ||||||||||    
T  19256349 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 19256254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 21350615 - 21350520
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||| ||| ||||||||||||||| ||||        ||||||| ||||||| || |||||||||||| ||||||||||    
T  21350615 cactactagaaaaagcaaaataagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 21350520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 31399508 - 31399603
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgaca--------gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  ||||||| ||||||||||||||||          ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  31399508 cactactagaaaaaacaaaattaacgagggaaattagtgatgaaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 31399603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 3823270 - 3823225
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  3823270 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaa 3823225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 17810435 - 17810390
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  17810435 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaa 17810390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 25000431 - 25000476
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||    
T  25000431 cactactagaaaaagtaaaattagtgagggaaattagtgacggaaa 25000476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 32961796 - 32961751
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||    
T  32961796 cactactaaaaaaagcaaaattagcgagggaaatcagtgacagaaa 32961751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 25273328 - 25273368
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  25273328 cactactagaaaaagcaaaattaacgagggaaattagtgac 25273368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 9915043 - 9915086
Alignment:
Q  209 ctactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||    
T  9915043 ctactagaaaaagcaaaattagcgagagaaattagtgacggaaa 9915086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 24636790 - 24636694
Alignment:
Q  207 cactactagaaaa-agaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||| || ||||||| ||||||||||||||||| ||||        ||||||| ||||| | ||||||||||||||| ||||||||||    
T  24636790 cactactagaaaatagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaatt 24636694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 10917964 - 10917869
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| |||||||||| ||||| |        |||||||||| ||||| | |||| |||||||||| ||||||||||    
T  10917964 cactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaatttcttgattgcaaaatttagtgacggaatt 10917869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 17824616 - 17824711
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| |||||||||| ||||| |        |||||||||| ||||||  || |||||||||||| ||||||||||    
T  17824616 cactactagaaaaagcaaaattagagagggaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaatt 17824711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 22939450 - 22939355
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| || |||||||||||||         ||||||||||| ||||||| |  |||||||||||| ||||||||||    
T  22939450 cactactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattcctttgtcgcaaaatttagtgacggaatt 22939355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 23752286 - 23752381
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| ||||||||||||||| |||||||||         |||||| |||| ||||||| || |||||||||||| ||||||||||    
T  23752286 cactattagaaaaagcaaaattagcgagggatattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaatt 23752381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 40289421 - 40289516
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  ||||||||||||| ||||||||||| ||||        || |||| ||||||| || |||||||||||| ||||||||||    
T  40289421 cactactagaaaaattaaaattagcgaggaaaattagtgacggaaaaaatgaattttctcacaaattccttggtcgcaaaatttagtgacggaatt 40289516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 9631541 - 9631496
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||| ||| ||||||||||| ||||    
T  9631541 cactactagaaaaagcaaaattagcaaggaaaattagtgacggaaa 9631496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 13060931 - 13060976
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||| ||||| ||||||||||||| ||||||||||| ||||    
T  13060931 cactactagcaaaagcaaaattagcgaggtaaattagtgacggaaa 13060976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 15251738 - 15251693
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||| ||||||| |||||||| |||||||||||||||| ||||    
T  15251738 cactacttgaaaaagcaaaattagggagggaaattagtgacggaaa 15251693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 24479813 - 24479858
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||| |||||| | |||||| |||||||||||||||||||||    
T  24479813 cactactaaaaaaagcataattagagagggaaattagtgacagaaa 24479858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 33412977 - 33413013
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagt 244  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  33412977 cactactagaaaaagaaaa-ttagcgagggaaattagt 33413013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 42700657 - 42700702
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||| |||| |||||| ||||    
T  42700657 cactactagaaaaagtaaaattagcgaggaaaatcagtgacggaaa 42700702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 6816382 - 6816422
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    |||||||||| ||||| | ||||||||||||||||||||||    
T  6816382 gcactactaggaaaagcataattagcgagggaaattagtga 6816422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 8789926 - 8789882
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| ||||||| || |||||||||||| ||||||||||    
T  8789926 aaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 8789882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 14304359 - 14304327
Alignment:
Q  214 agaaaaagaaaaattagcgagggaaattagtga 246  Q
    |||||||| ||||||||||||||||||||||||    
T  14304359 agaaaaagcaaaattagcgagggaaattagtga 14304327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 31344223 - 31344267
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| |||| ||||| | ||||||||||||||||||||||||||    
T  31344223 aaatttctcataaatttcttgatcgcaaaatttaatgacggaatt 31344267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 23539371 - 23539276
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| |||||||||  |||||||||||||||||||||||    
T  23539371 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttaatgacggaatt 23539276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 23699823 - 23699920
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||||||||||||||||||||||||||         ||||||||||| ||||| |||| |||||||||||| |||| |||||    
T  23699823 agcactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaatt 23699920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 28801018 - 28800922
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgaca--------gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||| ||||||||||||||||||||||||||        ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  28801018 gcactactagaaaaagcaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 28800922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 22486533 - 22486438
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  22486533 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 22486438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 24605979 - 24605882
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||||||||| |||||||||||||||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  24605979 agcactactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatt 24605882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 1843033 - 1842938
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||| |||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  1843033 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 1842938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 2650828 - 2650923
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||||||| ||||||| ||||||||         ||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  2650828 cactactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 2650923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 3872187 - 3872282
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || || ||||||||| ||||||||||    
T  3872187 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtctcaaaatttagtgacggaatt 3872282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 6849211 - 6849306
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| |  |||||||||||| ||||||||||    
T  6849211 cactactagaaaaagcaaaattagcgagggaaattagtgacggagaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaatt 6849306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 9698538 - 9698584
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaat 253  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  9698538 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaat 9698584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 11036646 - 11036551
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||| |||||||||||||||         ||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  11036646 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 11036551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 18217968 - 18217873
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||| ||||    
T  18217968 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaatt 18217873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 21917334 - 21917429
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  21917334 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 21917429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 23577189 - 23577284
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||||||| |||||| ||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  23577189 cactactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 23577284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 48933275 - 48933180
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| ||||||||||||| ||||||||||| ||||        ||||||| |||||||||| |||||||||||| ||||||||||    
T  48933275 cactattagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 48933180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 2093362 - 2093407
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  2093362 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaa 2093407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 3904478 - 3904523
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  3904478 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 3904523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 7733312 - 7733407
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||  ||||||||||||||||||||||||         ||||||||||| ||||||| || ||||||||||||  |||||||||    
T  7733312 cactactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagagacggaatt 7733407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 15014405 - 15014500
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |        |||||||||| ||||||| |  |||||||||||| ||||||||||    
T  15014405 cactactagaaaaagtaaaattagcgagggaaattggtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttagtgacggaatt 15014500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 20174159 - 20174064
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||| || ||||| ||||||||||||||||||||||||| ||||        ||||||| ||||| |||| |||||||||||| ||||||||||    
T  20174159 cactaccaggaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 20174064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 23232178 - 23232083
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  23232178 cactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatt 23232083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 27806157 - 27806062
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||         ||||||||||| ||||||| || ||| |||||||| ||||||||||    
T  27806157 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaatt 27806062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 31425511 - 31425606
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  31425511 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctgtggtcgcaaaatttagtgacggaatt 31425606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 37135285 - 37135380
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  |||||||| ||||||||||||||||         ||||||||||| |||||||||| ||| |||||||| ||||||||||    
T  37135285 cactactagaaaaaacaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcataaattccatggtcgtaaaatttagtgacggaatt 37135380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 47523650 - 47523745
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  |||||||||||||||||||||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  47523650 cactactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatt 47523745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 1907494 - 1907449
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  1907494 cactactaggaaaagcaaaattagcgagggaaattagtgacggaaa 1907449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 23750736 - 23750781
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||    
T  23750736 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaa 23750781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 45664857 - 45664812
Alignment:
Q  249 gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  45664857 gaaattcctcacaaattccttgatcgcaaaatttagtgacggaatt 45664812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 33427828 - 33427788
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  33427828 cactactagaaaaaacaaaattagcgagggaaattagtgac 33427788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 39979675 - 39979719
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  39979675 aaattcctcacaaattccttggtcgcaaaatttaatgacggaatt 39979719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 20429604 - 20429509
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||| | |||||||||||||||         ||||||||||| ||||| |||| ||| |||||||| ||||||||||    
T  20429604 cactactagaaaaagcaaaattaacaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgtaaaatttagtgacggaatt 20429509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 688005 - 687972
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaat 240  Q
    ||||||||||||||| ||||||||||||||||||    
T  688005 cactactagaaaaagcaaaattagcgagggaaat 687972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 2457803 - 2457762
Alignment:
Q  211 actagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||| ||||| |||||||| |||||||||||||||||||||    
T  2457803 actaggaaaagcaaaattagggagggaaattagtgacagaaa 2457762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 21623159 - 21623115
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  21623159 cactactagaaaaagcaaaat-agcgagggaaattagtgacggaaa 21623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 42926419 - 42926464
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||  ||||||||||||| ||||||||||| ||||    
T  42926419 cactactagaaaaaataaaattagcgaggaaaattagtgacggaaa 42926464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 36636594 - 36636550
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| ||||||| || |||||||||||| ||||||||||    
T  36636594 aaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 36636550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 9670479 - 9670574
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  9670479 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 9670574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 27040024 - 27040120
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||| ||||||||||||||||||||||||| |        |||||||||| ||||| |||| |||||||||||| ||||||||||    
T  27040024 gcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 27040120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 4586758 - 4586853
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| |||||| |||||||| ||||||||||    
T  4586758 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgtaaaatttagtgacggaatt 4586853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 44783620 - 44783525
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||| |||||||||||||||||||| ||||        ||||||| ||||||| || |||||||||||||||||||||||    
T  44783620 cactactagaaaaagcaaaactagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaatt 44783525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 5473988 - 5473891
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||| |||||||||||||||||||||||||         |||||||||||  |||||| || |||||||||||| ||||||||||    
T  5473988 agcactactagaaaaagcaaaattagcgagggaaattagtgacgggaaaaatgaaattcctcaccaattccttggtcgcaaaatttagtgacggaatt 5473891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 55309212 - 55309308
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac---------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||          ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  55309212 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 55309308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 2275677 - 2275773
Alignment:
Q  207 cactactagaaaaag-aaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||        ||||||| ||||||| ||||||||||||||| ||||||||||    
T  2275677 cactactagaaaaaacaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaatt 2275773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 13564915 - 13564961
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaat 253  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  13564915 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaat 13564961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 19680424 - 19680519
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||||||| ||||||| ||||||||         ||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  19680424 cactactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 19680519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 19839316 - 19839221
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         |||||| |||| ||||||| || |||||||||||| ||||||||||    
T  19839316 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaatt 19839221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 22168405 - 22168310
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| || |||||||    
T  22168405 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattccttggtcgcaaaatttagtgccggaatt 22168310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 45532579 - 45532674
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| ||||        ||||||| ||||| | ||||||||||||||||||||||||||    
T  45532579 cactattagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttaatgacggaatt 45532674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 7111946 - 7111991
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  7111946 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 7111991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 9238625 - 9238720
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||| |||||| |||||||||||||||||||||||||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  9238625 cactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 9238720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 24682328 - 24682411
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaattta 283  Q
    ||||||||||||||||||||||| ||||||||||| |||| |        |||||||||| |||||||||| ||||||||||||    
T  24682328 actactagaaaaagaaaaattagggagggaaattaatgacggaaaaaataaaattcctcacaaattccatggtcgcaaaattta 24682411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 32175737 - 32175832
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |        |||||||||| ||||| | || |||||||||||| ||||||||||    
T  32175737 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 32175832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 46286229 - 46286324
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| || ||||||||||||| |        |||||||||| ||||| |||| |||||||||||| ||||||||||    
T  46286229 cactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 46286324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 30268988 - 30269033
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||    
T  30268988 cactactagaaaaagcaaaattagcgagggaaatcagtgacggaaa 30269033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 30283201 - 30283156
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||    
T  30283201 cactactagaaaaagcaaaattagcgagggaaatcagtgacggaaa 30283156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 37378673 - 37378718
Alignment:
Q  249 gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  37378673 gaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 37378718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 38619984 - 38619939
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||    
T  38619984 cactactagaaaaagcaaaattagcgagggaaattaatgacggaaa 38619939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 38645887 - 38645842
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||    
T  38645887 cactactagaaaaagcaaaattagcgagggaaattattgacggaaa 38645842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 45091398 - 45091353
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||    
T  45091398 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaa 45091353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 4627079 - 4627123
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||    
T  4627079 actactagaaaaagcaaaattagcgagggaaattaatgacggaaa 4627123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 9058952 - 9059047
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||| ||||| |||||||| |||||||||| ||||| ||||        || |||| ||||||| || |||||||||||||||||||||||    
T  9058952 cactactaggaaaagcaaaattagggagggaaatttgtgactgaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaatt 9059047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 12072099 - 12072004
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| |||||||||||| |||||||||||  ||||        ||| ||| ||||||| ||||||||||||||| ||||||||||    
T  12072099 cactattagaaaaagcaaaattagcgagcgaaattagtgatcgaaaaaatgaaattcttcataaattccttgatcgcaaaatttagtgacggaatt 12072004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 13028816 - 13028911
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacaga--------aattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||| ||||||||| ||||||||||| ||        ||||||||| ||||| | || |||||||||||| ||||||||||    
T  13028816 cactactagaaaaagcaaacttagcgaggaaaattagtgacggaaaaaatgcaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 13028911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 18715039 - 18714944
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| || ||||||||||||||| |||||| |        |||||||||| ||||||| || || ||||||||| ||||||||||    
T  18715039 cactactagaaaaagcaatattagcgagggaaataagtgacggaaaaaataaaattcctcacaaattccttggtctcaaaatttagtgacggaatt 18714944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 29625462 - 29625367
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| || |||||| |||||||||||||||||||| |||| ||||        ||||||| |||||||||  |||||||||||| ||||||||||    
T  29625462 cactaatataaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttagtgacggaatt 29625367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 42055534 - 42055439
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||||||||  |||||         ||||||||||| ||||||| || |||||||||||| | ||||||||    
T  42055534 cactactagaaaaagcaaaattagcgagggaaatctgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtaacggaatt 42055439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 25026694 - 25026649
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||| ||||||||| |||||||| |||||||||||||||| ||||    
T  25026694 cactattagaaaaagtaaaattagtgagggaaattagtgacggaaa 25026649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 25225234 - 25225201
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaat 240  Q
    |||||||||||||||||||||||| |||||||||    
T  25225234 cactactagaaaaagaaaaattagggagggaaat 25225201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 30420033 - 30420078
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||| |||| ||||||||||| ||||    
T  30420033 cactactagaaaaagcaaaattagggaggaaaattagtgacggaaa 30420078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 30568049 - 30568094
Alignment:
Q  249 gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||| |||||| ||| ||| |||||||||||||||||||    
T  30568049 gaaattcctcacaaattctatggtcgtaaaatttaatgacggaatt 30568094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 54539423 - 54539378
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||| ||| ||||||||||| ||||    
T  54539423 cactactagaaaaagcaaaattagcaaggaaaattagtgacggaaa 54539378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 4606829 - 4606869
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  4606829 cactactaggaaaagtaaaattagggagggaaattagtgac 4606869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 30508073 - 30508029
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| ||||||| || |||||||||||| ||||||||||    
T  30508073 aaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 30508029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 3461310 - 3461405
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||| |||||||||||||||        |||||||||| ||||| | ||||||||||||||||||||||||||    
T  3461310 cactactagaaaaagcaaaattagcgaaggaaattagtgacagaaaaaataaaattcctcacaaatttcttgatcgcaaaatttaatgacggaatt 3461405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 21816856 - 21816761
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  21816856 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 21816761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 8546380 - 8546285
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||| |||||||| ||||||||||||| ||||||||||| ||||        ||||||| ||||||||||||||||||||||| ||||||||||    
T  8546380 cactaccagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatgatcgcaaaatttagtgacggaatt 8546285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 18104530 - 18104625
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||| |||| |        |||||||||| |||||||||| |||||||||||| ||||||||||    
T  18104530 cactactagaaaaagcaaaattagcgagggaaattattgacggaaaaaattaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 18104625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 29956507 - 29956412
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtg--------acagaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||        |  ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  29956507 cactactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 29956412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 30005662 - 30005567
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtg--------acagaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||        |  ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  30005662 cactactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 30005567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 48404995 - 48404900
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  48404995 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 48404900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 43329760 - 43329858
Alignment:
Q  204 cagcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || ||| |||||||| ||||||||||    
T  43329760 cagcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaatt 43329858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 1745488 - 1745582
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac-------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||| |||||| |||||||||||||||||||||||||        ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  1745488 cactactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 1745582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 11219275 - 11219178
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||  |||||||||||||||||||||||||         |||||| |||| |||||||||  |||||||||||||||||||||||    
T  11219275 agcactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatagtcgcaaaatttaatgacggaatt 11219178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 5261072 - 5260977
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  5261072 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 5260977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 8110474 - 8110379
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| ||||||| || ||| |||||||||||||||||||    
T  8110474 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcggaaaatttaatgacggaatt 8110379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 10772052 - 10772098
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  10772052 gcactactagaaaaagtaaaattaacgagggaaattagtgacagaaa 10772098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 13921460 - 13921365
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  13921460 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 13921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 19269864 - 19269959
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  19269864 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 19269959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 26098948 - 26098853
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtg--------acagaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||        |  ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  26098948 cactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 26098853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 27449223 - 27449128
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  27449223 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatt 27449128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 7623531 - 7623576
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7623531 cactactagaaaaagaaaaatcagcgagggaaattagtgacggaaa 7623576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 11915892 - 11915798
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  11915892 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaatt 11915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 294
Target Start/End: Complemental strand, 18539932 - 18539844
Alignment:
Q  214 agaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||| |||||||| |||||||||||||||| ||||        ||||||||||||| |||| |||||||||||| ||||||||||    
T  18539932 agaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcaaaaatttcatggtcgcaaaatttagtgacggaatt 18539844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 8428306 - 8428211
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  |||||||||||||||||||||||||         ||||||||||| ||||||| || ||| |||||||| ||||||||||    
T  8428306 cactactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaatt 8428211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 9652713 - 9652618
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||| ||||||||||||||||||         ||||||||||| ||||| |||  |||||||||||| ||||||||||    
T  9652713 cactactagaaaaagcaaaattggcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaatt 9652618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 18091546 - 18091592
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  18091546 gcactactaaaaaaagcaaaattagcgagggaaattagtgacggaaa 18091592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 19223584 - 19223489
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||||||||| |||||         ||||||||||| ||||||| || ||| |||||||| ||||||||||    
T  19223584 cactactagaaaaagcaaaattagcgagggaaattggtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaatt 19223489  T

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Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 26390634 - 26390729
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||| ||||||||||||         ||||||||||| ||||||| || || ||||||||| ||||||||||    
T  26390634 cactactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaatt 26390729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 18380159 - 18380114
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||    
T  18380159 cactactagaaaaagtaaaattagcgagggaaatcagtgacggaaa 18380114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 25882705 - 25882660
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  25882705 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaa 25882660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 29236179 - 29236134
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  29236179 cactattagaaaaagcaaaattagcgagggaaattagtgacggaaa 29236134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 294
Target Start/End: Original strand, 29704041 - 29704127
Alignment:
Q  216 aaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||| ||||||||||||||||||||||||| ||||        ||||||| |||||  |||||||||||||||| ||||||||||    
T  29704041 aaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttatgatcgcaaaatttagtgacggaatt 29704127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 17582352 - 17582396
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||    
T  17582352 aaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 17582396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 294
Target Start/End: Original strand, 10941660 - 10941760
Alignment:
Q  202 tccagcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaat 293  Q
    |||| ||||||||||||||| ||||||||  |||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||| |||||    
T  10941660 tccaccactactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaat 10941759  T
Q  294 t 294  Q
    |    
T  10941760 t 10941760  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 36543884 - 36543845
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  36543884 cactactagaaaaagaaaaattagggaggaaaattagtga 36543845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 36564439 - 36564478
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  36564439 cactactagaaaaagaaaaattagggaggaaaattagtga 36564478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 1310959 - 1311054
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||| ||| |||||||||||         |||| |||||| ||||||| || |||||||||||| ||||||||||    
T  1310959 cactactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaaatcctcacaaattccttggtcgcaaaatttagtgacggaatt 1311054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 11386468 - 11386430
Alignment:
Q  209 ctactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  11386468 ctactagaaaaagcaaaattagcgatggaaattagtgac 11386430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 13905038 - 13905133
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||| ||||||||||||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  13905038 cactactagaaaaagcaaaattagagagcgaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 13905133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 15063992 - 15064087
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||| ||||| |||||||| |||||||||| ||||| ||||        ||||||| ||||||| || |||||||||||| ||||||||||    
T  15063992 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 15064087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 17762777 - 17762682
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||| |  |||||||||||||||||||||||||         ||||||||||| ||||||| || || ||||||||| ||||||||||    
T  17762777 cactactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaatt 17762682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 19064097 - 19064002
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||| |  |||||||||||||||||||||||||         ||||||||||| ||||||| || || ||||||||| ||||||||||    
T  19064097 cactactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaatt 19064002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 19610473 - 19610378
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||| ||||| |||||||| |||||||||| ||||| ||||        ||||||| ||||||| || |||||||||||| ||||||||||    
T  19610473 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 19610378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 20761949 - 20761995
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||||| ||||| || |||||||||||||||| ||||    
T  20761949 gcactactagaaaaagcaaaatcagggagggaaattagtgacggaaa 20761995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 23773612 - 23773517
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaa--------attcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  ||||||||  ||||||||||||||| |||        |||||||| ||||||| || |||||||||||| ||||||||||    
T  23773612 cactactagaaaaaacaaaattagtaagggaaattagtgacggaagaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 23773517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 5565857 - 5565812
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||| || |||||||||||||||| ||||    
T  5565857 cactactagaaaaagcaaaatcagggagggaaattagtgacggaaa 5565812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 6718795 - 6718750
Alignment:
Q  249 gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  6718795 gaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 6718750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 10803805 - 10803760
Alignment:
Q  249 gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||| ||||| | || |||||||||||||||||||||||    
T  10803805 gaaattcctcacaaatttcttggtcgcaaaatttaatgacggaatt 10803760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 11007683 - 11007728
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  11007683 cactactagaaaaagcaaaattagtaagggaaattagtgacggaaa 11007728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 17269602 - 17269639
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaatta 242  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  17269602 agcactactagaaaaagcaaaattagcgatggaaatta 17269639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 19545595 - 19545550
Alignment:
Q  249 gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  19545595 gaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 19545550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 20088540 - 20088499
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgaca 248  Q
    ||||||||||||||| |||||||| |||||||||||| ||||    
T  20088540 cactactagaaaaagtaaaattagagagggaaattagcgaca 20088499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 21020200 - 21020155
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||| ||||| |||||||| |||||||||||||||| ||||    
T  21020200 cactactaggaaaagcaaaattagggagggaaattagtgacggaaa 21020155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 46942622 - 46942577
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||  |||||||| || ||||||||||||||||||    
T  46942622 cactactagaaaaatcaaaattagggaaggaaattagtgacagaaa 46942577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 47263265 - 47263310
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||| ||| ||||||| ||||||||||    
T  47263265 cactactagaaaaagcaaaattaacgaaggaaattggtgacagaaa 47263310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 11837213 - 11837253
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    |||||||||||||||  ||||||||||||||||||| ||||    
T  11837213 gcactactagaaaaaacaaaattagcgagggaaattcgtga 11837253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 16299945 - 16299901
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| ||||||| || |||||||||||| ||||||||||    
T  16299945 aaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 16299901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 17269655 - 17269699
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| ||||||  ||||||||||||||| ||||||||||    
T  17269655 aaattcctcacaaattctttgatcgcaaaatttagtgacggaatt 17269699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 26830493 - 26830537
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| |||||||||| |||||||||||  ||||||||||    
T  26830493 aaattcctcacaaattccatggtcgcaaaattttgtgacggaatt 26830537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 23857956 - 23858052
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgac-------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||| |||||||||||||||||||||||||        ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  23857956 agcactactagaaaaagcaaaattagcgagggaaattagtgacgggaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 23858052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 37552363 - 37552267
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||  || |||||||||||||||||||||||    
T  37552363 gcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaatt 37552267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 22140364 - 22140459
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||| |||||||||||||||||         ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  22140364 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 22140459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 41736307 - 41736212
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| ||||||||||||||| ||||| ||||    
T  41736307 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacgaaatt 41736212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 28319580 - 28319674
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||        ||||||| |||||||||| |||||||||||| ||||||||||    
T  28319580 actactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 28319674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 294
Target Start/End: Original strand, 20065072 - 20065169
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| |||| |||||||||||| |||| |||||    
T  20065072 agcactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgactgaatt 20065169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 32300588 - 32300491
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||| ||| |||||||| ||||||||||||||||||||||||| ||||        ||||||| |||||||||| |||||||||||| ||||||||||    
T  32300588 agcattaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 32300491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 44476375 - 44476470
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||| ||| ||||||| || |||||||||||| ||||||||||    
T  44476375 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcacaaattccttggtcgcaaaatttagtgacggaatt 44476470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 12779735 - 12779690
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12779735 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 12779690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 32009088 - 32008992
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac---------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||          ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  32009088 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 32008992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 13613092 - 13613188
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||| ||||||||||||||||||||| |||||||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  13613092 gcactactggaaaaagaaaaattagcgaggaaaattagtgacgaaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatt 13613188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 32185969 - 32185922
Alignment:
Q  205 agcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  32185969 agcactactagaaaaaacaaaattagcgagggaaattagtgacggaaa 32185922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 13788055 - 13788150
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||| ||||||         ||||||||||| ||||||| || |||||||||||| ||||| ||||    
T  13788055 cactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaatt 13788150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 15636735 - 15636830
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||| |||||||| |||||||||||||||||||||||||         ||||||||||| ||||| |||| |||||||||||| ||||| ||||    
T  15636735 cactaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacgaaatt 15636830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 18551253 - 18551348
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||| |||||| ||||||||||||| |||||||||||         ||||||||||| ||||||| | ||||||||||||| ||||||||||    
T  18551253 cactactaaaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttagtgacggaatt 18551348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 21293711 - 21293806
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  |||||||||||||||||||||||||         |||||| |||| |||||||||| ||| |||||||| ||||||||||    
T  21293711 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgtaaaatttagtgacggaatt 21293806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 27039908 - 27040003
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  27039908 cactactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 27040003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 28841342 - 28841437
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||| ||||| |||||||||||||||||||||| ||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  28841342 cactactaggaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 28841437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 41637753 - 41637658
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| |||||||||| ||||| |        |||||||||| ||||||| || |||||||||||| ||||||||||    
T  41637753 cactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 41637658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 43408511 - 43408606
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  43408511 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 43408606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 7093703 - 7093658
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  7093703 cactactagtaaaagcaaaattagcgagggaaattagtgacggaaa 7093658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 37723992 - 37724037
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||    
T  37723992 cactgctagaaaaagaaaaatcagcgagggaaattagtgacggaaa 37724037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 294
Target Start/End: Complemental strand, 1141664 - 1141576
Alignment:
Q  214 agaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||| |||||||||||||||||||||||||         ||||||||||| ||||| |||| |||||||||||| |||| |||||    
T  1141664 agaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaatt 1141576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 8430432 - 8430336
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||  |||||||||| |||||||||||||| |        |||||||||| |||||  ||||||| |||||||| ||||||||||    
T  8430432 gcactactagaaaaaacaaaattagcgggggaaattagtgacggaaaaaataaaattcctcacaaattttatgatcgtaaaatttagtgacggaatt 8430336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 242
Target Start/End: Complemental strand, 44723067 - 44723032
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaatta 242  Q
    ||||||||||||||| ||||||||||||||||||||    
T  44723067 cactactagaaaaagcaaaattagcgagggaaatta 44723032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 26243321 - 26243359
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtg 245  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  26243321 cactactagaaaaagcaaaattaacgagggaaattagtg 26243359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 16098917 - 16098962
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||  |||||||| ||||||||||||| |||||||    
T  16098917 cactactagaaaaatcaaaattagggagggaaattagtaacagaaa 16098962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 23388379 - 23388473
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||  ||||||||||||||||||| |||||         ||||||| ||| ||||| |||| |||||||||||| ||||||||||    
T  23388379 actactagaaaaaacaaaattagcgagggaaattggtgacggaaaaaatgaaattcttcacaaatttcatggtcgcaaaatttagtgacggaatt 23388473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 28262496 - 28262460
Alignment:
Q  210 tactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  28262496 tactagaaaaagtaaaattagcaagggaaattagtga 28262460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 31266438 - 31266394
Alignment:
Q  250 aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||| ||||||| || |||||||||||| ||||||||||    
T  31266438 aaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 31266394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 50092298 - 50092393
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||||||||||||||||||||||||         ||||||||||| ||||| ||||||| ||||||||| ||||||||||    
T  50092298 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcacaaaatttagtgacggaatt 50092393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 12720948 - 12720853
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||||||||||||||| |        |||||||||| ||||||| || |||||||||||| ||||||||||    
T  12720948 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 12720853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 15243224 - 15243129
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||        ||||||| ||||||| ||||||||||||||| ||||||||||    
T  15243224 cactactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaatt 15243129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 22158941 - 22158846
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgaca--------gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||| |||||||| ||||||||||||||||||||||||||        ||||||||||| ||||| |||| |||||||||||| ||||||||||    
T  22158941 cactaccagaaaaagtaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 22158846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 46790139 - 46790044
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||  || |||||||||||||||||||||||    
T  46790139 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaatt 46790044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 25787998 - 25788092
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||| ||||||||||||| ||||||||||| |        |||||||||| |||||||||| |||||||||||| ||||||||||    
T  25787998 actactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaagaaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 25788092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 6459356 - 6459261
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||  ||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  6459356 cactactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 6459261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 9109975 - 9110070
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  9109975 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 9110070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 20408160 - 20408255
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||         ||||||||||| |||||||||| |||||||||||| | ||||||||    
T  20408160 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtaacggaatt 20408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 28229455 - 28229550
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||| ||||||    
T  28229455 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaatt 28229550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 45839431 - 45839336
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||| |||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  45839431 cactactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 45839336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 8940994 - 8941039
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  8940994 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 8941039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 12369951 - 12369996
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12369951 cactactagaaaaagcaaaattagcgagggaaattagtgacggaaa 12369996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 48522657 - 48522612
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  48522657 cactactagaaaaagcaaaattagcgaggaaaattagtgacagaaa 48522612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 29549557 - 29549517
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  29549557 cactactagaaaaagcaaaattagcgagggaaattagtgac 29549517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 52183818 - 52183722
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||| ||||||| |||||||||||| |||| |        |||||||||| ||||| |||| |||||||||||| ||||||||||    
T  52183818 gcactactagaaaaagcaaaattaacgagggaaattaatgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 52183722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 4340546 - 4340451
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| ||||        ||||||| ||||||| || |||||||||||| ||||||||||    
T  4340546 cactattagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 4340451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 6412053 - 6412148
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||| ||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  6412053 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 6412148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 12161953 - 12161858
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||| |||| ||||        ||||||| ||||| |||| |||||||||||| ||||||||||    
T  12161953 cactactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 12161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 19865383 - 19865288
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||         |||||| |||| ||||||| || |||||||||||| ||||||||||    
T  19865383 cactactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaatt 19865288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 22603687 - 22603592
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtg--------acagaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||| |||||||||||||        |  ||||||||||| ||||||  ||||||||||||||| ||||||||||    
T  22603687 cactactagaaaaagcaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcacaaattctttgatcgcaaaatttagtgacggaatt 22603592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 23458036 - 23457941
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||| |||| ||||        ||||||| ||||| |||| |||||||||||| ||||||||||    
T  23458036 cactactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaatt 23457941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 27253855 - 27253950
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||||||| |||| |||||| |||| |        ||||| |||| |||||||||| |||||||||||| ||||||||||    
T  27253855 cactactagaaaaagaaaaattagggaggaaaattaatgacggaaaaaataaaatttctcacaaattccatggtcgcaaaatttagtgacggaatt 27253950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 46339445 - 46339540
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||         ||||||||||| ||||||| |  |||||||||||| ||||||||||    
T  46339445 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaatt 46339540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 50845330 - 50845425
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag--------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| |||||||||| ||||| |        |||||||||| ||||||| || |||||||||||| ||||||||||    
T  50845330 cactactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 50845425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 51973563 - 51973468
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||| ||         ||||||||||| ||| || ||| |||||||||||| ||||||||||    
T  51973563 cactactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcataaaatctatggtcgcaaaatttagtgacggaatt 51973468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 7181555 - 7181600
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  7181555 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaa 7181600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 9464192 - 9464147
Alignment:
Q  249 gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||    
T  9464192 gaaattcctcacaaattccatggtcgcaaaatttagtgacggaatt 9464147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 20290321 - 20290366
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||    
T  20290321 cactgctagaaaaagtaaaattagcgagggaaattagtgacggaaa 20290366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 46865382 - 46865337
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||    
T  46865382 cactactagaaaaagaaaaactagggagggaaattagtgacggaaa 46865337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 46785964 - 46786053
Alignment:
Q  213 tagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||| |||||||||||||||||||||||||         |||||| |||| || |||| || |||||||||||||||||||||||    
T  46785964 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaagttccttggtcgcaaaatttaatgacggaatt 46786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 41120737 - 41120776
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  41120737 cactaatagaaaaagcaaaattagcgagggaaattagtga 41120776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 9177240 - 9177202
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagt 244  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  9177240 gcactactagaaaaaacaaaattagcgagggaaattagt 9177202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 17200010 - 17200105
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  |||||||||||||||||| ||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  17200010 cactactagaaaaaacaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattcattggtcgcaaaatttagtgacggaatt 17200105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 41752573 - 41752527
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||||| |||||||| || ||||||||||||| ||||    
T  41752573 gcactactagaaaaagcaaaattagtgacggaaattagtgacggaaa 41752527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 9985327 - 9985372
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  9985327 cactactagaaaaaacaaaattagcaagggaaattagtgacggaaa 9985372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 38531170 - 38531215
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||| |||||||| ||||||||| |||||| ||||    
T  38531170 cactactagaaaaagtaaaattagggagggaaataagtgacggaaa 38531215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 18890556 - 18890588
Alignment:
Q  214 agaaaaagaaaaattagcgagggaaattagtga 246  Q
    |||||||| ||||||||||||||||||||||||    
T  18890556 agaaaaagcaaaattagcgagggaaattagtga 18890588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 18894900 - 18894940
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac 247  Q
    ||||||||| ||||| ||||||||||||| |||||||||||    
T  18894900 cactactaggaaaagcaaaattagcgaggaaaattagtgac 18894940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 202913 - 202818
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||||||||||||||||||||||||||||||         |||||| |||| ||||||| || |||||||||||| ||||||||||    
T  202913 cactactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattgctcacaaattccttggtcgcaaaatttagtgacggaatt 202818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 3881 - 3786
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||||||| |||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  3881 cactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 3786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 274664 - 274710
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||    
T  274664 gcactactagaaaaaacaaaattagcgagggaaattagtgacggaaa 274710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 44056 - 44017
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44056 cactactagaaaaagaaaaattagcgagggaaattagtga 44017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 9229 - 9324
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| ||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  9229 cactactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 9324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 14990 - 15085
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  14990 cactactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaatt 15085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 19742 - 19647
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||| |||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||||||||||    
T  19742 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatt 19647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 12791 - 12696
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||| ||||||| |||||||||||||||||||||||||         ||||||||||| |||||| ||| |||||||||||| ||||||||||    
T  12791 cactacttgaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattctatggtcgcaaaatttagtgacggaatt 12696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 22350 - 22255
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| |  |||||||||||| ||||||||||    
T  22350 cactactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaatt 22255  T

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Target: scaffold0599 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 7643 - 7549
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||| |||||||||||||||||||||||||         ||||||||||| ||||| | || |||||||||||| ||||||||||    
T  7643 actactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaatt 7549  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 182668 - 182574
Alignment:
Q  208 actactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||||||||||||| |||||||||||||||||||||||||         |||||| |||| ||||||| || |||||||||||| ||||||||||    
T  182668 actactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaatt 182574  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 219776 - 219730
Alignment:
Q  206 gcactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  219776 gcactactagaaaaagcaaaattagcgacggaaattagtgacggaaa 219730  T

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Target: scaffold0717 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 918 - 1014
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacag---------aaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||||||||||||||| |||| |         |||||||||| ||||||| || |||||||||||| ||||||||||    
T  918 cactactagaaaaagcaaaattagcgagggaaattactgacggaaaaaaataaaattcctcataaattccttggtcgcaaaatttagtgacggaatt 1014  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 39703 - 39742
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  39703 cactactagaaaaagcaaaattagcgagggaaattagtga 39742  T

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Target: scaffold0655 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 3162 - 3257
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||        ||||||| ||||| |||| |||||||||||| |||| |||||    
T  3162 cactaatagaaaaagaaaaattagggagggaaattagtgacggaaaagataaagttcctcacaaatttcatggtcgcaaaatttagtgacagaatt 3257  T

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Target: scaffold0603 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 5979 - 6074
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||  |||||||||||||||||||||||||         ||||||||||| ||||||| || |||||||||||| ||| ||||||    
T  5979 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaatt 6074  T

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Target: scaffold0128 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 10663 - 10758
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||| |||||||||| |||||||||||||||||||||||||         ||||||||||| ||||||| |  |||||||||||| ||||||||||    
T  10663 cactgctagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaatt 10758  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 294
Target Start/End: Original strand, 84678 - 84769
Alignment:
Q  211 actagaaaaagaaaaattagcgagggaaattagtgaca--------gaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||| |||||||| |||||||||||||||||        ||||||||||| ||||||| || |||||||||||| ||| ||||||    
T  84678 actagaaaaagcaaaattagtgagggaaattagtgacagaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaatt 84769  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 84442 - 84347
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||| |||||||||||||||         ||||||||||| ||||| |||| || ||||||||| ||||||||||    
T  84442 cactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcacaaaatttagtgacggaatt 84347  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 8110 - 8205
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||| |||||||||| |||||||||||||||||||| ||||         ||||||||| | ||||||| || |||||||||||| ||||||||||    
T  8110 cacttctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaatt 8205  T

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Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 21842 - 21937
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    |||| |||||||||| |||||||||||||||||||| ||||         ||||||||| | ||||||| || |||||||||||| ||||||||||    
T  21842 cacttctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaatt 21937  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 17617 - 17662
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||    
T  17617 cactactagaaaaaacaaaattagcgagggaaattagtgacggaaa 17662  T

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Target: scaffold0554 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 9949 - 9910
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtga 246  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  9949 cactactagaaaaagcaaaattagcgagtgaaattagtga 9910  T

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Target: scaffold0161 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 6931 - 6889
Alignment:
Q  210 tactagaaaaagaaaaattagcgagggaaattagtgacagaaa 252  Q
    |||||||||||| |||||||||||||||||||| |||| ||||    
T  6931 tactagaaaaagcaaaattagcgagggaaattattgacggaaa 6889  T

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Target: scaffold0076 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 26622 - 26527
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgac--------agaaattcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| |||||||| || |||||||||||||         ||||||||||| ||||||  || |||||||||||| ||||||||||    
T  26622 cactactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatt 26527  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 58721 - 58626
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||| ||||| |||||||| |||||||||| ||||| ||||        ||||||||||||| | || |||||||||||| ||||||||||    
T  58721 cactactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaaaaatttcttggtcgcaaaatttagtgacggaatt 58626  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 440102 - 440007
Alignment:
Q  207 cactactagaaaaagaaaaattagcgagggaaattagtgacagaaa--------ttcctcaaaaattccatgatcgcaaaatttaatgacggaatt 294  Q
    ||||||||||||||| ||||||||| ||| | ||||||||| ||||        ||||||| ||||| | ||||||||||||||| ||||||||||    
T  440102 cactactagaaaaagtaaaattagcaaggaatattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaatt 440007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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