View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0364_low_19 (Length: 246)
Name: NF0364_low_19
Description: NF0364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0364_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 19618853 - 19618690
Alignment:
| Q |
1 |
tttccacaattgattgttgttttaacaaaataaataaatacatccgcaccttaaaaattggtgtgttgtagtaattatccnnnnnnnnnnnnngtagtaa |
100 |
Q |
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| T |
19618853 |
tttccacaattgattgttgttttaacaaaataaataaatacatccgcaccttataaattggtgtgttgtagtaattatcc--tttttttttttgtagtaa |
19618756 |
T |
|
| Q |
101 |
ttatccatgtgacttttacttttcatatgatggaaatgaatgtgatattggatgaagtgatgatgt |
166 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19618755 |
ttatccatgtgacttttacttttcatatgatggaaatgaatgtgatattggatgaagtgatgatgt |
19618690 |
T |
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