View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0365-Insertion-10 (Length: 317)
Name: NF0365-Insertion-10
Description: NF0365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0365-Insertion-10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 7 - 317
Target Start/End: Original strand, 53055088 - 53055402
Alignment:
| Q |
7 |
atattcctggtttca-gttactaccacctca-attatatataatgcatcaaccttttagaggcattgataatt-gatttggtccatatgattgcttcaaa |
103 |
Q |
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| T |
53055088 |
atattcctggcttcaagttactactacgtcacattatatataatgcatcaaccttttagaggcattgataatttgatttggtccatatgattgcttcaaa |
53055187 |
T |
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| Q |
104 |
tgacaccaaaagcaaaacataaaacaagttaaatatggaaccaattctatatataaatatttattacatctgatgtgatataacttataagaattggaaa |
203 |
Q |
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| T |
53055188 |
tgacaccaaaagcaaaacataaaacaagttaaatatggaaccaattctatatataaatatttattacatctgatgtgatataacttataagaattggaaa |
53055287 |
T |
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| Q |
204 |
acatatatatctgatagtggtattttaccatttattggtgtaacttttattaatagtaccgtattggataggatatgaattgcaaa-gtgtttataagtg |
302 |
Q |
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| T |
53055288 |
agatatatatctgatagtggtattttaccatttattggtgtaacttttattaatagtaccgtattggataggatatgaattgcaaaggtgtttataagtg |
53055387 |
T |
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| Q |
303 |
atggagataatcctc |
317 |
Q |
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| T |
53055388 |
atggagataatcctc |
53055402 |
T |
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