View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0365-Insertion-13 (Length: 292)
Name: NF0365-Insertion-13
Description: NF0365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0365-Insertion-13 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 7 - 283
Target Start/End: Complemental strand, 36522079 - 36521803
Alignment:
| Q |
7 |
aagaagaatgagaagaagatatgaagaaaagtggtcactattcaatgaccatttggttagttagaagttagaaaaagtgatatactatagtactatttct |
106 |
Q |
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| T |
36522079 |
aagaagaatgagaagaagatatgaagaaaagtggtcactattcaatggccatttggttagttagaagttagaaaaagtgatatactatagtactatttct |
36521980 |
T |
|
| Q |
107 |
cctattaaaatgtcaatgatttgctcaataggtgtcatgaagnnnnnnncaaatattctaataatgtcatgaaagaaagttaattgtaattcaaataatt |
206 |
Q |
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| T |
36521979 |
cctattaaaatgtcaatgatttgctcaataggtgtcatgaagaaaaaaacaaatattctaataatgtcatgaaagaaagttaattgtaattcaaataatt |
36521880 |
T |
|
| Q |
207 |
cttctcattggagcatagtcaagatatacactaattgatacattgaatgttcaataatggtggtttgatgatagtga |
283 |
Q |
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| T |
36521879 |
cttctcattggagcatagtcaagatatacactaattgatacattgaatgttcaataatggtggtttgatgatagtga |
36521803 |
T |
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