View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0365-Insertion-14 (Length: 219)
Name: NF0365-Insertion-14
Description: NF0365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0365-Insertion-14 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 219126 - 218915
Alignment:
| Q |
8 |
acctccacatgcaacattaaggacttgtgaacctctacaaattcctaagtaaggaatgtttctttcaagacaaagctttgctaagactaattcaattgaa |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
219126 |
acctccacatgcaacattaaggacttgtgaacctctacaaattcctaagtaaggaatgtttctttcaagacaaagctttgctaagattaattcaattgaa |
219027 |
T |
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| Q |
108 |
tctttttctttgtcaatgtttgtgtcacttgaatgaagctttttgatttcttctaactcttcatgtgaaagattacatgttgtgttatcttgttcgtacc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
219026 |
tctttttctttgtcaatgtttgtgtcacttgaatgaagctttttgatttcttctaactcttcatgtgaaagattacatgttgtgttatcttgttcgtacc |
218927 |
T |
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| Q |
208 |
atgaaggatcta |
219 |
Q |
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|||||||||||| |
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| T |
218926 |
atgaaggatcta |
218915 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 31652092 - 31652208
Alignment:
| Q |
8 |
acctccacatgcaacattaaggacttgtgaacctctacaaattcctaagtaaggaatgtttctttcaagacaaagctttgctaagactaattcaattgaa |
107 |
Q |
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|||||||||||| ||||| |||| |||||| |||||||||||||| ||||||||||| ||||||||||||||||| || |||| |||||||||||||| |
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| T |
31652092 |
acctccacatgccacatttaggagttgtgaccctctacaaattcccaagtaaggaatatttctttcaagacaaagtttggctagtgctaattcaattgaa |
31652191 |
T |
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| Q |
108 |
tctttttctttgtcaat |
124 |
Q |
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| T |
31652192 |
tctttttctttgtcaat |
31652208 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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