View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0365_2D_low_16 (Length: 233)

Name: NF0365_2D_low_16
Description: NF0365_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0365_2D_low_16
NF0365_2D_low_16
[»] chr4 (44 HSPs)
chr4 (33-217)||(47704219-47704403)
chr4 (87-218)||(46728792-46728923)
chr4 (87-182)||(43156887-43156982)
chr4 (87-213)||(12519767-12519893)
chr4 (87-217)||(30416466-30416596)
chr4 (87-182)||(40859785-40859880)
chr4 (86-217)||(46716767-46716898)
chr4 (87-217)||(15729854-15729984)
chr4 (87-217)||(23067721-23067851)
chr4 (87-141)||(38434710-38434764)
chr4 (155-220)||(29211737-29211802)
chr4 (87-218)||(35658403-35658533)
chr4 (87-217)||(9661964-9662094)
chr4 (87-217)||(47466016-47466145)
chr4 (88-141)||(14346543-14346596)
chr4 (112-217)||(23963817-23963922)
chr4 (87-222)||(4634394-4634529)
chr4 (87-138)||(6408554-6408605)
chr4 (87-222)||(14542380-14542515)
chr4 (87-218)||(42972149-42972280)
chr4 (87-141)||(7242718-7242772)
chr4 (87-217)||(29589234-29589364)
chr4 (87-121)||(30416590-30416624)
chr4 (87-217)||(46386647-46386777)
chr4 (100-141)||(51646218-51646259)
chr4 (96-167)||(8252917-8252988)
chr4 (96-167)||(8266335-8266406)
chr4 (93-141)||(31601307-31601355)
chr4 (86-217)||(33020800-33020929)
chr4 (157-216)||(3169607-3169666)
chr4 (92-218)||(9474411-9474537)
chr4 (88-147)||(26625247-26625306)
chr4 (87-141)||(32189091-32189145)
chr4 (87-217)||(38170033-38170162)
chr4 (87-121)||(40859757-40859791)
chr4 (87-169)||(49066795-49066877)
chr4 (155-216)||(4154683-4154744)
chr4 (89-218)||(16991985-16992114)
chr4 (157-218)||(20961629-20961690)
chr4 (100-217)||(29474201-29474318)
chr4 (87-140)||(38546008-38546061)
chr4 (90-218)||(1125055-1125183)
chr4 (157-217)||(2945318-2945378)
chr4 (87-115)||(28588673-28588701)
[»] chr3 (21 HSPs)
chr3 (87-217)||(22844163-22844293)
chr3 (87-217)||(913189-913319)
chr3 (86-221)||(32237865-32238000)
chr3 (87-217)||(40797144-40797274)
chr3 (87-141)||(7656464-7656518)
chr3 (126-220)||(35670563-35670657)
chr3 (87-217)||(39340310-39340440)
chr3 (87-217)||(4019706-4019839)
chr3 (87-217)||(42106251-42106379)
chr3 (87-214)||(36540550-36540676)
chr3 (87-141)||(22893664-22893718)
chr3 (87-217)||(43029794-43029924)
chr3 (87-139)||(1220198-1220250)
chr3 (87-139)||(33069767-33069819)
chr3 (86-141)||(29776639-29776694)
chr3 (87-217)||(54240197-54240327)
chr3 (91-217)||(25939352-25939478)
chr3 (87-141)||(40461944-40461998)
chr3 (87-217)||(53426909-53427039)
chr3 (157-218)||(33076466-33076527)
chr3 (91-139)||(44647533-44647581)
[»] chr2 (43 HSPs)
chr2 (87-217)||(43929173-43929303)
chr2 (87-217)||(7443439-7443569)
chr2 (87-217)||(10589206-10589336)
chr2 (87-217)||(37883764-37883894)
chr2 (87-217)||(13268683-13268813)
chr2 (86-217)||(5071243-5071374)
chr2 (87-150)||(15071489-15071552)
chr2 (87-217)||(7640229-7640359)
chr2 (87-217)||(29812488-29812617)
chr2 (87-144)||(25237272-25237329)
chr2 (87-216)||(44951530-44951659)
chr2 (87-139)||(17068866-17068918)
chr2 (87-139)||(17118764-17118816)
chr2 (87-218)||(25622916-25623048)
chr2 (87-210)||(8064667-8064790)
chr2 (87-217)||(31262826-31262957)
chr2 (87-158)||(31269027-31269098)
chr2 (87-217)||(4878609-4878739)
chr2 (87-217)||(19580875-19581005)
chr2 (87-216)||(24500598-24500727)
chr2 (87-139)||(17074863-17074915)
chr2 (115-218)||(12183204-12183307)
chr2 (87-218)||(19953681-19953811)
chr2 (90-217)||(28228336-28228463)
chr2 (87-162)||(33259287-33259362)
chr2 (108-222)||(802956-803070)
chr2 (87-217)||(29734301-29734431)
chr2 (87-139)||(2251296-2251348)
chr2 (87-139)||(17095436-17095488)
chr2 (87-217)||(35353754-35353881)
chr2 (184-219)||(43711540-43711575)
chr2 (87-217)||(3397852-3397982)
chr2 (87-121)||(10589178-10589212)
chr2 (86-212)||(13547008-13547134)
chr2 (87-141)||(16879914-16879968)
chr2 (87-141)||(16992047-16992101)
chr2 (87-141)||(25771556-25771610)
chr2 (87-121)||(41842059-41842093)
chr2 (87-144)||(32341840-32341897)
chr2 (87-135)||(3390543-3390591)
chr2 (87-135)||(3603096-3603144)
chr2 (184-216)||(17792682-17792714)
chr2 (86-138)||(44441492-44441544)
[»] chr8 (35 HSPs)
chr8 (87-217)||(32061905-32062035)
chr8 (87-218)||(37659077-37659208)
chr8 (87-217)||(32256594-32256724)
chr8 (89-217)||(11298633-11298761)
chr8 (87-217)||(8054680-8054810)
chr8 (86-222)||(12244084-12244220)
chr8 (87-182)||(14327590-14327685)
chr8 (87-217)||(3925563-3925693)
chr8 (87-141)||(12248663-12248717)
chr8 (87-217)||(17019229-17019359)
chr8 (87-217)||(17549666-17549796)
chr8 (104-218)||(18197018-18197132)
chr8 (88-222)||(30141220-30141352)
chr8 (87-217)||(31712949-31713079)
chr8 (87-140)||(5917692-5917745)
chr8 (87-216)||(26937636-26937765)
chr8 (95-175)||(36555943-36556022)
chr8 (87-218)||(44295427-44295558)
chr8 (87-217)||(10042883-10043013)
chr8 (87-217)||(32412901-32413031)
chr8 (87-140)||(16937289-16937342)
chr8 (89-141)||(2629025-2629077)
chr8 (87-217)||(1215214-1215342)
chr8 (90-141)||(7269413-7269464)
chr8 (86-125)||(11655875-11655914)
chr8 (95-218)||(32104710-32104833)
chr8 (87-141)||(6833591-6833645)
chr8 (87-141)||(9270132-9270186)
chr8 (87-141)||(9992778-9992832)
chr8 (87-141)||(31874195-31874249)
chr8 (89-122)||(13977515-13977548)
chr8 (157-217)||(5328133-5328193)
chr8 (89-141)||(5989743-5989795)
chr8 (90-138)||(7281079-7281127)
chr8 (87-215)||(27534287-27534415)
[»] chr5 (29 HSPs)
chr5 (87-217)||(20146092-20146219)
chr5 (87-217)||(22397421-22397551)
chr5 (87-222)||(35455204-35455338)
chr5 (87-217)||(20270825-20270955)
chr5 (87-216)||(8812026-8812154)
chr5 (87-217)||(6074609-6074739)
chr5 (87-217)||(9034815-9034945)
chr5 (87-215)||(6647788-6647916)
chr5 (93-216)||(2415517-2415640)
chr5 (87-141)||(13079256-13079310)
chr5 (87-217)||(18472599-18472728)
chr5 (111-217)||(25770741-25770847)
chr5 (87-141)||(33486518-33486572)
chr5 (87-181)||(41358150-41358244)
chr5 (87-217)||(41554598-41554728)
chr5 (86-211)||(15710652-15710777)
chr5 (97-216)||(8957327-8957446)
chr5 (87-222)||(31645940-31646075)
chr5 (87-217)||(40774871-40775002)
chr5 (87-141)||(13007803-13007857)
chr5 (87-217)||(29310227-29310357)
chr5 (87-124)||(34866538-34866575)
chr5 (87-139)||(41988263-41988315)
chr5 (87-217)||(6887051-6887181)
chr5 (87-141)||(37425135-37425189)
chr5 (89-142)||(24288874-24288927)
chr5 (89-142)||(24373295-24373348)
chr5 (89-173)||(32390564-32390648)
chr5 (87-139)||(40565106-40565158)
[»] chr7 (22 HSPs)
chr7 (87-217)||(772554-772684)
chr7 (87-217)||(28015468-28015598)
chr7 (87-218)||(30992695-30992826)
chr7 (87-141)||(34893222-34893276)
chr7 (87-141)||(43483711-43483765)
chr7 (87-212)||(32312678-32312803)
chr7 (87-218)||(43098688-43098819)
chr7 (87-217)||(5024929-5025059)
chr7 (87-217)||(40775378-40775508)
chr7 (87-217)||(43807023-43807153)
chr7 (87-179)||(14733962-14734052)
chr7 (87-217)||(9933958-9934084)
chr7 (87-139)||(34594473-34594525)
chr7 (87-215)||(47749845-47749973)
chr7 (95-217)||(8319434-8319556)
chr7 (87-141)||(13008622-13008676)
chr7 (87-217)||(26017531-26017661)
chr7 (128-217)||(41748400-41748489)
chr7 (86-216)||(14707693-14707823)
chr7 (87-217)||(21552328-21552458)
chr7 (101-175)||(27706504-27706578)
chr7 (144-217)||(35562534-35562607)
[»] chr6 (13 HSPs)
chr6 (87-217)||(23843297-23843427)
chr6 (86-217)||(8644355-8644486)
chr6 (87-217)||(13233981-13234111)
chr6 (87-222)||(33541399-33541532)
chr6 (87-182)||(10744694-10744789)
chr6 (87-222)||(32804406-32804541)
chr6 (87-140)||(34020716-34020769)
chr6 (94-217)||(19759906-19760029)
chr6 (115-222)||(20496332-20496439)
chr6 (87-121)||(15128122-15128156)
chr6 (87-141)||(22530391-22530445)
chr6 (87-133)||(32457757-32457803)
chr6 (157-218)||(7049426-7049487)
[»] scaffold0157 (1 HSPs)
scaffold0157 (87-213)||(1018-1144)
[»] chr1 (34 HSPs)
chr1 (87-211)||(29067160-29067284)
chr1 (86-217)||(10877456-10877587)
chr1 (87-222)||(28213159-28213294)
chr1 (86-217)||(44562622-44562753)
chr1 (92-222)||(12967600-12967730)
chr1 (87-222)||(33177466-33177600)
chr1 (87-217)||(11121087-11121217)
chr1 (87-217)||(21326584-21326714)
chr1 (87-141)||(27469657-27469711)
chr1 (87-217)||(52839641-52839771)
chr1 (87-218)||(13969512-13969646)
chr1 (87-218)||(22344784-22344915)
chr1 (87-141)||(26199691-26199745)
chr1 (87-217)||(36621463-36621593)
chr1 (87-168)||(2350733-2350814)
chr1 (97-222)||(34039443-34039568)
chr1 (87-139)||(37662321-37662373)
chr1 (87-218)||(8893404-8893535)
chr1 (87-217)||(34566799-34566927)
chr1 (89-175)||(35356467-35356553)
chr1 (88-139)||(48654992-48655043)
chr1 (87-201)||(12147937-12148051)
chr1 (87-141)||(23257199-23257253)
chr1 (87-141)||(33703459-33703513)
chr1 (87-141)||(38644746-38644800)
chr1 (87-141)||(38646695-38646749)
chr1 (87-121)||(40488366-40488400)
chr1 (87-141)||(49651955-49652009)
chr1 (93-218)||(5832351-5832476)
chr1 (89-218)||(10264822-10264951)
chr1 (92-133)||(15276407-15276448)
chr1 (177-218)||(29069720-29069761)
chr1 (93-141)||(630733-630781)
chr1 (87-135)||(32539145-32539193)
[»] scaffold0722 (1 HSPs)
scaffold0722 (87-217)||(5399-5529)
[»] scaffold0023 (1 HSPs)
scaffold0023 (108-191)||(91302-91385)
[»] scaffold0316 (1 HSPs)
scaffold0316 (87-217)||(12076-12206)
[»] scaffold0150 (1 HSPs)
scaffold0150 (87-141)||(10260-10314)
[»] scaffold0112 (1 HSPs)
scaffold0112 (87-126)||(25480-25519)
[»] scaffold0018 (1 HSPs)
scaffold0018 (87-141)||(137007-137061)
[»] scaffold0542 (1 HSPs)
scaffold0542 (137-217)||(3943-4023)


Alignment Details
Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 33 - 217
Target Start/End: Complemental strand, 47704403 - 47704219
Alignment:
Q  33 cactctcttgagagtcgacacctaaaactctattttcttctccttcatccaatatcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtt 132  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47704403 cactctcttgagagtcgacacctaaaactctagtttcttctccttcatccaatatcttagtgcgacgttgttttgttcgccgtctttgtacgatattgtt 47704304  T
Q  133 tgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttg 217  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||||||| ||| |  ||||||| ||||||||||||||||||    
T  47704303 tgtctttctagtcttattatggtgtttgtttgtttcaaattgttagatcaactttaactaattgcacattcaatcaatgactttg 47704219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 46728923 - 46728792
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||| |||||| || |  ||  ||| ||||||||||||| ||||| ||||||  ||    
T  46728923 tcttagtgcgaccttgttttgttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagctt 46728824  T
Q  187 tgatcaattgcagattcaatcaatgactttga 218  Q
     |||| | |||||||  |||||||||||||||    
T  46728823 cgatccagtgcagatcaaatcaatgactttga 46728792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 43156887 - 43156982
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatca 182  Q
    ||||||||| |||||||||||||||||| |||||| |||  |||||||||||||| || | |||  ||| ||||||||||||| ||||||||||||    
T  43156887 tcttagtgcaacgttgttttgttcgtcgactttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcggttcagattgttagatca 43156982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 12519767 - 12519893
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||||||| |||||||||||| ||||| |||  ||| |||||||||| || |  ||  ||| |||||| |||||||||||| ||||||| ||    
T  12519767 tcttagtgcgacgttggtttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattgtcagatcaactt 12519866  T
Q  187 tgatcaattgcagattcaatcaatgac 213  Q
     |||| | ||||||| |||||||||||    
T  12519867 cgatctagtgcagatccaatcaatgac 12519893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 30416596 - 30416466
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| |||||||||||||||||||||||||||||  |||  |||||| ||||| | || || ||  ||| ||||||||||||| ||||| ||||||  ||    
T  30416596 tctttgtgcgacgttgttttgttcgtcgtctttgcgcgacgttgtttctcttttttgttttgtttgggtatttgttcggttcagattgtcagatcagctt 30416497  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | |||||||  ||||||||||||||    
T  30416496 tgatccagtgcagatcaaatcaatgactttg 30416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 40859785 - 40859880
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatca 182  Q
    |||| |||||||| ||||||||||||||||||||| |||  |||||||||||||| || || ||  ||| ||||||||||||| ||||| ||||||    
T  40859785 tctttgtgcgacgctgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcagatca 40859880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 46716898 - 46716767
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    ||||| ||||||||||| |||||||||||||||||| |||  |||||||||||||| || |   |  ||| |||| |||||||| ||||| ||||||  |    
T  46716898 atcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagct 46716799  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    | |||| | ||||||| |||||||||||||||    
T  46716798 tcgatccagtgcagatccaatcaatgactttg 46716767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 15729984 - 15729854
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| |||||||||||||||||||||| |||  ||||||| |||||| || |  ||  ||| ||||||| ||||| ||||| ||||||| ||    
T  15729984 tcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcagttcagattgtcagatcaactt 15729885  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||| ||||    
T  15729884 cgatccagtgcagatcaaatcaatgattttg 15729854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 23067851 - 23067721
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||||||||| || |   |  ||| |||| |||||||| ||||| ||||||  ||    
T  23067851 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctt 23067752  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  23067751 cgatccagtgcagatccaatcaatgactttg 23067721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 38434710 - 38434764
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  38434710 tcttagtgcgacgttgttttgttcgtcgtctttgtccgacgttgtttgtctttct 38434764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 29211737 - 29211802
Alignment:
Q  155 tgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttgatg 220  Q
    |||||||||| |||| ||| |||||||||||| |||| |||||||||||||||||||| |||||||    
T  29211737 tgtttgttcgattcagattattagatcaatttcgatctattgcagattcaatcaatgattttgatg 29211802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 35658533 - 35658403
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattat-ggtgtttgttcggttcaaattgttagatcaatt 185  Q
    ||||| |||||||||||||||||   ||||||||| |||  |||||||||||| || |||| |  | ||||||||||| ||| | ||||| |||||| ||    
T  35658533 tcttattgcgacgttgttttgtttaccgtctttgtgcgacgttgtttgtcttt-tc-tcttttgttcggtgtttgttcagtttagattgtcagatcagtt 35658436  T
Q  186 ttgatcaattgcagattcaatcaatgactttga 218  Q
    |||||||| ||||||||||| ||||||||||||    
T  35658435 ttgatcaagtgcagattcaaccaatgactttga 35658403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 9661964 - 9662094
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| || ||||| ||||||||||||  ||    
T  9661964 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatcagctt 9662063  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  9662064 cgatccagtgcagatgcaatcaatgactttg 9662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 47466016 - 47466145
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||| ||||||||| ||||||||||||||  ||||||||| |||| |  ||| ||  ||| ||||||| | | | ||||||||||||| ||    
T  47466016 tcttagtgcgacgatgttttgtttgtcgtctttgtacggcattgtttgtttttc-ccccttgttcaggtatttgttcagataagattgttagatcaaatt 47466114  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||||| | ||||| ||| |||||||||||    
T  47466115 cgatcaagtccagatccaaccaatgactttg 47466145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 14346543 - 14346596
Alignment:
Q  88 cttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||||||||||||||||||||||||| |||| |||  ||||||||||||||    
T  14346543 cttagtgcgacgttgttttgttcgtcgtcgttgtgcgacgttgtttgtctttct 14346596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 23963817 - 23963922
Alignment:
Q  112 tcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatg 211  Q
    |||||||||| |||| ||||||||| ||||| |||| ||  | ||||||||||||||| ||| | | ||||| || |||| | ||||||||||||||||     
T  23963817 tcgtctttgtgcgatgttgtttgtcattctcatcttgttcagatgtttgttcggttcatattatcatatcaacttcgatccaatgcagattcaatcaatt 23963916  T
Q  212 actttg 217  Q
    ||||||    
T  23963917 actttg 23963922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 4634394 - 4634529
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| || ||||| ||||| ||||||  ||    
T  4634394 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagctt 4634493  T
Q  187 tgatcaattgcagattcaatcaatgactttgatgtc 222  Q
     |||| | ||||||| ||||||||||||||| ||||    
T  4634494 cgatccagtgcagatccaatcaatgactttggtgtc 4634529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 6408554 - 6408605
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctt 138  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  6408554 tcttggtgcgacgttgtttggttcgtcgtctttgtgcgacattgtttgtctt 6408605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 222
Target Start/End: Complemental strand, 14542515 - 14542380
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| || ||||| ||||| ||||||  ||    
T  14542515 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagctt 14542416  T
Q  187 tgatcaattgcagattcaatcaatgactttgatgtc 222  Q
     |||| | ||||||| ||||||||||||||| ||||    
T  14542415 cgatccagtgcagatccaatcaatgactttgttgtc 14542380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 42972149 - 42972280
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||| | |||  || ||| ||||||| || |   |  ||| |||| |||||||| ||||| ||||||| ||    
T  42972149 tcttcgtgcgacgttggtttgttcgtcgtctttatgcgacgttatttttctttcttgtttctctcaggtatttgatcggttcagattgtcagatcaactt 42972248  T
Q  187 tgatcaattgcagattcaatcaatgactttga 218  Q
     |||| | ||||||| ||||||||||||||||    
T  42972249 cgatccagtgcagatccaatcaatgactttga 42972280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 7242772 - 7242718
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||||| | |||||||||||||||||| |||  ||||||||||||||    
T  7242772 tcttagtgcgacgtcgatttgttcgtcgtctttgtgcgaagttgtttgtctttct 7242718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 29589364 - 29589234
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||| || |||||||| |||  ||||||||| |||| || |  ||  ||| |||||||  |||| |||||| |||||| ||    
T  29589364 tcttagtgcgacgttgttttgtttgttgtctttgtgcgaccttgtttgtcattcttgtttcgttcaggtatttgttcatttcagattgtttgatcaactt 29589265  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  | ||||||||||||    
T  29589264 cgatccagtgcagatcaactcaatgactttg 29589234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 30416624 - 30416590
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgt 121  Q
    |||||||||||||||||||||||||||||||||||    
T  30416624 tcttagtgcgacgttgttttgttcgtcgtctttgt 30416590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 46386777 - 46386647
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||| || |||||||||||| ||| ||||| ||  ||||||||| ||||| || |  ||  ||| ||||||| ||||||||||| | ||||| ||    
T  46386777 tcttagtgcaactttgttttgttcgccgtgtttgtgcgtcattgtttgtttttcttgtttcgtttaggtatttgttctgttcaaattgtcatatcaactt 46386678  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||| ||| |||||||||||||||    
T  46386677 cgatctagtgctgatccaatcaatgactttg 46386647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 51646218 - 51646259
Alignment:
Q  100 ttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  51646218 ttgttttgttcgtcgtctttgtgcgatgttgtttgtctttct 51646259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 8252917 - 8252988
Alignment:
Q  96 gacgttgttttgttcgtcgtctttgtacgatattg-tttgtctttctcgtcttattatggtgtttgttcggtt 167  Q
    |||||||||||||| ||||||||| |||||| ||| ||||| |||||| |||| ||||||||||| |||||||    
T  8252917 gacgttgttttgtttgtcgtctttatacgatgttgctttgt-tttctcatcttgttatggtgtttattcggtt 8252988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 8266335 - 8266406
Alignment:
Q  96 gacgttgttttgttcgtcgtctttgtacgatattg-tttgtctttctcgtcttattatggtgtttgttcggtt 167  Q
    |||||||||||||| ||||||||| |||||| ||| ||||| |||||| |||| ||||||||||| |||||||    
T  8266335 gacgttgttttgtttgtcgtctttatacgatgttgctttgt-tttctcatcttgttatggtgtttattcggtt 8266406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 31601355 - 31601307
Alignment:
Q  93 tgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||| |||||||||||||||||| ||| ||||||| |||||||    
T  31601355 tgcgacgttggtttgttcgtcgtctttgtgcgacattgtttatctttct 31601307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 33020929 - 33020800
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||||||||||||| ||||||||| ||||||||||| ||   ||||||||||||  |  ||| ||  ||||| |||||| |||| ||||| |||||| ||    
T  33020929 atcttagtgcgacgctgttttgtttgtcgtctttgtgcggcgttgtttgtcttttcc--cttgttgaggtgtctgttcgattcagattgtcagatcagtt 33020832  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    | |||| | |||| || ||| |||||||||||    
T  33020831 tcgatccagtgcaaatccaaccaatgactttg 33020800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 3169607 - 3169666
Alignment:
Q  157 tttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgacttt 216  Q
    ||||||||||||||||||| ||||||  ||  ||| | ||||||||||||||||||||||    
T  3169607 tttgttcggttcaaattgtcagatcagcttcaatccagtgcagattcaatcaatgacttt 3169666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 9474537 - 9474411
Alignment:
Q  92 gtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtct-tattatggtgtttgttcggttcaaattgttagatcaattttgat 190  Q
    ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || | | ||| ||| |||| | |||||| |||||  |||||| || |||    
T  9474537 gtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctta-ggtatttgattggttcagattgtctgatcaacttcgat 9474439  T
Q  191 caattgcagattcaatcaatgactttga 218  Q
    | | || |||| ||||||||||||||||    
T  9474438 ccagtgtagatccaatcaatgactttga 9474411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 26625247 - 26625306
Alignment:
Q  88 cttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtctt 147  Q
    ||||||||||  ||||||||||||||||||||||  | | |||||||||||||| |||||    
T  26625247 cttagtgcgatattgttttgttcgtcgtctttgtgtggtgttgtttgtctttcttgtctt 26625306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 32189091 - 32189145
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| |||||    
T  32189091 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttct 32189145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 38170162 - 38170033
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||| |  |||||||||| ||||||||  |||||  |||||||||||||| || || ||  ||| ||| ||| ||||| ||||| | ||||| ||    
T  38170162 tcttagtgcaatattgttttgtttgtcgtcttcttacgacgttgtttgtctttcttgt-ttgttcaggtatttattccgttcagattgtcatatcaactt 38170064  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | ||| ||| |||||||||||||||    
T  38170063 tgatctagtgctgatccaatcaatgactttg 38170033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 40859757 - 40859791
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgt 121  Q
    |||||||||||||||||||||||||| ||||||||    
T  40859757 tcttagtgcgacgttgttttgttcgttgtctttgt 40859791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 49066795 - 49066877
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttca 169  Q
    |||||||||||| || |||| |||||| | ||| ||| |  |||||||||||||||||||| ||  ||| |||||||||||||    
T  49066795 tcttagtgcgacatttttttattcgtcatttttatacaacgttgtttgtctttctcgtcttgttgaggtatttgttcggttca 49066877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 4154744 - 4154683
Alignment:
Q  155 tgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgacttt 216  Q
    ||||||||||||||| ||||| | |||| |||| ||| | |||| |||||||||||||||||    
T  4154744 tgtttgttcggttcagattgtcatatcattttttatccaatgcatattcaatcaatgacttt 4154683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 16991985 - 16992114
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttg 188  Q
    |||||| |||||||||||||| ||||||||||| |||  ||||||| |||||| || || ||  ||| ||  ||||||||| ||| | ||||||  || |    
T  16991985 ttagtgtgacgttgttttgtttgtcgtctttgtgcgacgttgtttgcctttcttgttttgttcaggtattctttcggttcagattatcagatcagcttcg 16992084  T
Q  189 atcaattgcagattcaatcaatgactttga 218  Q
    ||| | |||| ||  |||||||||||||||    
T  16992085 atccagtgcatatcaaatcaatgactttga 16992114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 20961629 - 20961690
Alignment:
Q  157 tttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttga 218  Q
    |||| ||| |||| ||||| ||||||| || |||| | ||||||||||||||||||||||||    
T  20961629 tttgatcgcttcagattgtcagatcaacttcgatccagtgcagattcaatcaatgactttga 20961690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 29474318 - 29474201
Alignment:
Q  100 ttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcag 199  Q
    |||||||||||||||||||||| |||  |||||||  ||||| || |  ||  ||| ||||||||||||| ||||| ||| ||  || |||| | |||||    
T  29474318 ttgttttgttcgtcgtctttgtgcgacgttgtttgcttttcttgtttcgttcaggtatttgttcggttcagattgtcagaccatcttcgatccagtgcag 29474219  T
Q  200 attcaatcaatgactttg 217  Q
    ||  ||||||||||||||    
T  29474218 atcaaatcaatgactttg 29474201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 38546061 - 38546008
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttc 140  Q
    ||||| ||||||||||| ||||||||||||||||| |||| ||  |||||||||    
T  38546061 tcttaatgcgacgttgtgttgttcgtcgtctttgtgcgatgtttgttgtctttc 38546008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 1125055 - 1125183
Alignment:
Q  90 tagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttga 189  Q
    |||||||| ||||||||||  ||||||||| | |||  ||| |||||||||| || |  ||  ||| |||||| |||||||||||| ||||||  || ||    
T  1125055 tagtgcgatgttgttttgtctgtcgtctttttgcgacgttgattgtctttcttgtttcgttcaggtatttgtttggttcaaattgtcagatcagcttcga 1125154  T
Q  190 tcaattgcagattcaatcaatgactttga 218  Q
    || | |||||||  ||||||||| |||||    
T  1125155 tccagtgcagatcaaatcaatgattttga 1125183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 2945318 - 2945378
Alignment:
Q  157 tttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttg 217  Q
    ||||||||||||| ||||| |||||||||| |||| | || |||  |||||||||||||||    
T  2945318 tttgttcggttcagattgtcagatcaatttcgatccagtgaagacacaatcaatgactttg 2945378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 115
Target Start/End: Original strand, 28588673 - 28588701
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgt 115  Q
    |||||||||||||||||||||||||||||    
T  28588673 tcttagtgcgacgttgttttgttcgtcgt 28588701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 22844163 - 22844293
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| |||||||||||||||||||||| |||  |||||||||||||| || || ||  ||| ||||||||||||| ||||| ||||||| ||    
T  22844163 tcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattgtcagatcaactt 22844262  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||||| |||||||  ||||||||||||||    
T  22844263 cgatcaagtgcagatcaaatcaatgactttg 22844293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 913319 - 913189
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||| | |||||||||||||||||||||| |||  |||||||||||||| || || ||  ||| ||||||||||||| ||||| ||||||  ||    
T  913319 tcttagtgcggcattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagatcagctt 913220  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  913219 cgatccagtgcagatcaaatcaatgactttg 913189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 32238000 - 32237865
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    ||||| |||||| |||| |||||||||||||||||| ||   |||||||||||||| || |  ||  ||| ||||||||||||| ||||| ||||||  |    
T  32238000 atctttgtgcgatgttggtttgttcgtcgtctttgtgcggcgttgtttgtctttctagtttcgttcaggtatttgttcggttcagattgtcagatcagct 32237901  T
Q  186 ttgatcaattgcagattcaatcaatgactttgatgt 221  Q
    | |||| | |||| ||||||||||||||||||||||    
T  32237900 tagatccagtgcacattcaatcaatgactttgatgt 32237865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 40797144 - 40797274
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||| ||| |||||||||||||||||||||| |||  |||||||||||||| || || ||  ||| |||||||| |||| ||||| ||||||  ||    
T  40797144 tcttagtgagacattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcgattcagattgtcagatcagctt 40797243  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  40797244 cgatctagtgcagatcaaatcaatgactttg 40797274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 7656518 - 7656464
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  7656518 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgatattgtttgtctttct 7656464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 35670563 - 35670657
Alignment:
Q  126 tattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttgatg 220  Q
    |||||||||||||||  ||||| ||||| |||||||||| |||| |||||||||| || || |||| | |||| || ||||||||||||||||||    
T  35670563 tattgtttgtctttcctgtcttgttatgatgtttgttcgattcagattgttagataaacttcgatccaatgcatatccaatcaatgactttgatg 35670657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 39340310 - 39340440
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| |||||||| ||||||||||||| ||   |||||||||||||| || |  |||  || ||||||||||| | ||||| | ||||| ||    
T  39340310 tcttagtgcgactttgttttgctcgtcgtctttgtgcggcgttgtttgtctttcttgtttcgttaatgtatttgttcggtttagattgtcatatcaactt 39340409  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||| |||||||||||||||||||    
T  39340410 agatctagtgctgattcaatcaatgactttg 39340440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 4019706 - 4019839
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgt---acgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaa 183  Q
    ||||||||||||||||| |||||||||||||||||    || | || ||||||||| | || || ||  ||| ||||||||||||| ||||| ||||||     
T  4019706 tcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttttttgtctttattgttttgttcaggtatttgttcggttcagattgtcagatcag 4019805  T
Q  184 ttttgatcaattgcagattcaatcaatgactttg 217  Q
     || |||| | ||||||| |||||||||||||||    
T  4019806 cttagatccagtgcagatccaatcaatgactttg 4019839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 42106251 - 42106379
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| |||||||||||||||||||||| ||||||  |||  || ||||||||||| || || ||  ||| ||||||||||||| ||||| ||||||  ||    
T  42106251 tctttgtgcgacgttgttttgttcgtcatctttg--cgacgttatttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagatcagctt 42106348  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  42106349 cgatccagtgcagatcaaatcaatgactttg 42106379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 36540676 - 36540550
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||| |||||||| ||||  ||| |||||||||||||| || | |||   || ||||| ||||||| ||||| ||||||| ||    
T  36540676 tcttagtgcgacgttgttttgatcgtcgtc-ttgtgggatgttgtttgtctttcttgtttcattcaagtatttgtccggttcagattgtcagatcaactt 36540578  T
Q  187 tgatcaattgcagattcaatcaatgact 214  Q
     |||  | | |||||| |||||||||||    
T  36540577 cgattcagtacagattaaatcaatgact 36540550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 22893718 - 22893664
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||||||| |||||||||| ||||||||||   ||||||||||||||    
T  22893718 tcttagtgcgacgttggtttgttcgtcatctttgtacggcgttgtttgtctttct 22893664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 43029794 - 43029924
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| || ||||| ||||| ||||||  ||    
T  43029794 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagctt 43029893  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  43029894 cgatccagtgcagatccaatcaatgactttg 43029924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 1220250 - 1220198
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||||||||| ||||||||||||||||||||||| ||   ||||||||||||    
T  1220250 tcttagtgcgatgttgttttgttcgtcgtctttgtgcggctttgtttgtcttt 1220198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 33069767 - 33069819
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||||||| || |||||||||| |||| |||||||||| |||||||||||||    
T  33069767 tcttagtgcaacattgttttgtttgtcgcctttgtacgacattgtttgtcttt 33069819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 29776694 - 29776639
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||| ||||||||||  |||||||||||||||||||||   ||||||||||||||    
T  29776694 atctttgtgcgacgtttgtttgttcgtcgtctttgtacggcgttgtttgtctttct 29776639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 54240197 - 54240327
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtct-tattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||| ||||||||||| |||||||| ||||||||| |||| |||||||| ||||| || | ||| | ||| |||| |||||||| ||||| ||||||  |    
T  54240197 tcttcgtgcgacgttggtttgttcgacgtctttgtgcgatgttgtttgtttttcttgtttctatca-ggtatttgatcggttcagattgtgagatcagct 54240295  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    | |||  | |||| || |||||||||||||||    
T  54240296 tcgattcagtgcaaatccaatcaatgactttg 54240327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 25939478 - 25939352
Alignment:
Q  91 agtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgat 190  Q
    ||||||||||||||||||| ||||||||||| ||   |||||||||||| | || |  ||  | | ||||||  ||||| ||||||||||||  || |||    
T  25939478 agtgcgacgttgttttgttagtcgtctttgtgcggcgttgtttgtctttgttgtttcgttcagatatttgttatgttcagattgttagatcagcttagat 25939379  T
Q  191 caattgcagattcaatcaatgactttg 217  Q
      | ||||||| |||||||||||||||    
T  25939378 tcagtgcagatccaatcaatgactttg 25939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 40461998 - 40461944
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||||||| |||| |||||||||||||||||| ||   ||||||||||||||    
T  40461998 tcttagtgcgatgttgatttgttcgtcgtctttgtgcggcgttgtttgtctttct 40461944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 53426909 - 53427039
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||| | ||||||||| |||||||  |   |||||||||||||| || || ||  ||| ||||||||||| | ||||| |||| |  ||    
T  53426909 tcttagtgcgacgttttgttgttcgtcatctttgtgtgcctttgtttgtctttcttgttttgttcaggtatttgttcggtttagattgtcagataagctt 53427008  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||  | ||||||| |||||||||||||||    
T  53427009 agatatagtgcagatccaatcaatgactttg 53427039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 33076466 - 33076527
Alignment:
Q  157 tttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttga 218  Q
    |||| |||||||| |||||||||| |  ||||||| | ||||||| ||||||||||||||||    
T  33076466 tttgatcggttcagattgttagattagctttgatccagtgcagatccaatcaatgactttga 33076527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 44647533 - 44647581
Alignment:
Q  91 agtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    |||| ||||||||||||||||||||||| ||  ||||||||||| ||||    
T  44647533 agtgtgacgttgttttgttcgtcgtcttagtctgatattgtttgacttt 44647581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 43929303 - 43929173
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtct-tattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||||||||| || | ||| | ||| |||| |||||||| |||||||||||| ||    
T  43929303 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctatca-ggtatttgatcggttcagattgttagatcagtt 43929205  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    | |||||| |||||||||||||||||||||||    
T  43929204 tcgatcaagtgcagattcaatcaatgactttg 43929173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 7443569 - 7443439
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||||| || || ||  ||| ||||||||||||| ||||| ||||||  ||    
T  7443569 tcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtaagatcagctt 7443470  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
      ||| | |||||||  ||||||||||||||    
T  7443469 caatccagtgcagatcaaatcaatgactttg 7443439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 10589206 - 10589336
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| |||||||||||||||||||||||||||||| |||  |||||||||||||| || || ||  ||| ||||||||||||| | ||| ||||||  ||    
T  10589206 tctttgtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagagtgtcagatcagctt 10589305  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | |||||||  ||||||||||||||    
T  10589306 tgatccagtgcagatcaaatcaatgactttg 10589336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 37883764 - 37883894
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || |  ||   || |||||||| |||| ||||| | ||||  ||    
T  37883764 tcttagtgcgacgttgttttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgttgacgtatttgttcgattcagattgtcatatcagctt 37883863  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | |||||||  ||||||||||||||    
T  37883864 tgatccaatgcagatcaaatcaatgactttg 37883894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 13268683 - 13268813
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||| |  |   ||| ||| |||| |||| ||||| ||||||| ||    
T  13268683 tcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttttcgtttcgtctaggtatttattcgattcagattgtcagatcaactt 13268782  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | |||| || ||||||| |||||||    
T  13268783 tgatccaatgcatatccaatcaacgactttg 13268813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 5071374 - 5071243
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtc-tttctcgtcttattatggtgtttgttcggttcaaattgttagatcaat 184  Q
    |||||||||| ||||||||||||| ||||||||||| |||  ||||||||| |||||| |||| ||  ||||||||||||||||| ||||| |||||||     
T  5071374 atcttagtgcaacgttgttttgtttgtcgtctttgtgcgactttgtttgtcttttctc-tcttgttcaggtgtttgttcggttcagattgtcagatcaac 5071276  T
Q  185 tttgatcaattgcagattcaatcaatgactttg 217  Q
    || |||| | || |||| ||| | |||||||||    
T  5071275 ttcgatctagtgtagatccaaccgatgactttg 5071243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 15071552 - 15071489
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttatt 150  Q
    ||||||| ||||||| ||||||||||||||||||||||   |||||||||||||||||||||||    
T  15071552 tcttagtacgacgttattttgttcgtcgtctttgtacgtcgttgtttgtctttctcgtcttatt 15071489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 7640359 - 7640229
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||||||||| || |   |  ||| |||| |||||||| ||||| ||||||  ||    
T  7640359 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctt 7640260  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  7640259 cgatccagtgcagatccaatcaatgactttg 7640229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 29812617 - 29812488
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||||| |||||||||||||||||||| || | |||||| ||||||| || | |||  ||| | ||||||||||  ||||||| |||| |||    
T  29812617 tcttagtgcgacgt-gttttgttcgtcgtctttgtgcggtgttgtttttctttcttgtttcattcaggtatgtgttcggttcggattgttatatcagttt 29812519  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||| ||||    
T  29812518 agatccagtgcagatccaatcaatgattttg 29812488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 25237329 - 25237272
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgt 144  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||    
T  25237329 tcttagtgcgacgttgttttgttcgtcgtctttgtgcgacattgtttgtttttttcgt 25237272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 44951530 - 44951659
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| ||||||||||||||||||||||  |||||||| ||||| || |   |  ||| |||| |||||||| ||||| ||||||  ||    
T  44951530 tcttcgtgcgacgttggtttgttcgtcgtctttgtacgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctt 44951629  T
Q  187 tgatcaattgcagattcaatcaatgacttt 216  Q
     |||| | ||||||| ||||||||||||||    
T  44951630 cgatccagtgcagatccaatcaatgacttt 44951659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 17068918 - 17068866
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  17068918 tcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttt 17068866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 17118816 - 17118764
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  17118816 tcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttt 17118764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 25623048 - 25622916
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt-ctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||||||||||| |||||||||||||||||||||| ||   |||||||||||| || || ||| |  ||| ||| ||||||||| ||||| | ||||  |    
T  25623048 tcttagtgcgacattgttttgttcgtcgtctttgtgcggcgttgtttgtctttccttgttttactcaggtattttttcggttcagattgtcatatcagct 25622949  T
Q  186 ttgatcaattgcagattcaatcaatgactttga 218  Q
    | |||  | ||||||||||||||||||||||||    
T  25622948 tagattcagtgcagattcaatcaatgactttga 25622916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 8064790 - 8064667
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| |||||||||| ||||| ||||| |||||||||||||||||| | |||| |    |||||||||  ||||||||||| | | ||| ||    
T  8064790 tcttagtgcgacattgttttgtttgtcgtttttgtgcgatattgtttgtctttcccatcttgtccaagtgtttgtttagttcaaattgtcataccaaatt 8064691  T
Q  187 tgatcaattgcagattcaatcaat 210  Q
    ||||| ||  ||||| ||||||||    
T  8064690 tgatccatcacagatccaatcaat 8064667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 31262957 - 31262826
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtc-tttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||||||||||  |||||||||| ||||||||||| || | ||||||||| ||| ||||||| || |||||||| | ||||||| ||||| ||||||  |    
T  31262957 tcttagtgcgagattgttttgtttgtcgtctttgtgcgttgttgtttgtcatttttcgtcttgttttggtgtttttccggttcagattgtcagatcagct 31262858  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    |  ||| | |||| |||||||||| |||||||    
T  31262857 tcaatcgagtgcaaattcaatcaacgactttg 31262826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 31269098 - 31269027
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtt 158  Q
    |||||||||||| |||||||||||||| ||||||| |||| |||||||||| | ||||||| ||||| ||||    
T  31269098 tcttagtgcgacattgttttgttcgtcttctttgtgcgatgttgtttgtctatatcgtcttgttatgatgtt 31269027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 4878739 - 4878609
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| |||||| ||||||||||||||||||||||| |||  |||||||||||||| |  |  ||  ||| ||||||||||||| ||||| | ||||  ||    
T  4878739 tctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcagctt 4878640  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  4878639 cgatccagtgcagatcaaatcaatgactttg 4878609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 19581005 - 19580875
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| |||||||||||||||||||||| |||  |||||||| ||| | || || ||  ||| |||||||| |||| ||||| ||||||  ||    
T  19581005 tcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttgttttttttgttttgttcaggtatttgttcgattcagattgtcagatcagctt 19580906  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||| ||  ||||||||||||||    
T  19580905 cgatccagtgcatatcaaatcaatgactttg 19580875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 24500598 - 24500727
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| || ||||||||||||||||||| |||  |||||||||||||| || || ||   || ||||||||||||| ||| | ||||||  ||    
T  24500598 tcttagtgcgaccttattttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagattatcagatcagctt 24500697  T
Q  187 tgatcaattgcagattcaatcaatgacttt 216  Q
     |||| | |||||||  ||| |||||||||    
T  24500698 cgatccagtgcagatcaaatgaatgacttt 24500727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 17074915 - 17074863
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    |||||||||||||||||||||| |||||||||||| || | ||||||||||||    
T  17074915 tcttagtgcgacgttgttttgtccgtcgtctttgtgcggtgttgtttgtcttt 17074863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 12183307 - 12183204
Alignment:
Q  115 tctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgact 214  Q
    ||||||| |||  |||||||| || | |||||| ||  |||| |||||| ||||| ||||||||||||| || |||||| |||| ||||||| |||||||    
T  12183307 tctttgtgcgacgttgtttgttttccccgtcttgtttaggtgcttgttcagttcatattgttagatcaacttcgatcaagtgcaaattcaataaatgact 12183208  T
Q  215 ttga 218  Q
    ||||    
T  12183207 ttga 12183204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 19953681 - 19953811
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||| ||||||||| ||||| ||||||||||| ||   |||||||||||||| || || ||   || ||||||||||||| ||||| ||||||  ||    
T  19953681 tcttagtacgacgttgtgttgtttgtcgtctttgtgcggcgttgtttgtctttcttgttttgttcaagtatttgttcggttcagattgtcagatcatctt 19953780  T
Q  187 tgatcaattgcagattcaatcaatgactttga 218  Q
      ||| | |||||| |||||||||||||||||    
T  19953781 aaatccaatgcaga-tcaatcaatgactttga 19953811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 28228336 - 28228463
Alignment:
Q  90 tagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttga 189  Q
    |||||||| |||| |||||||||  ||||||| || | |||||||||||||| || |  ||   || ||||||||||||| ||||| | ||||  |||||    
T  28228336 tagtgcgatgttggtttgttcgttatctttgtgcggttttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcatatcagctttga 28228435  T
Q  190 tcaattgcagattcaatcaatgactttg 217  Q
    || | ||||||| |||||||||||||||    
T  28228436 tccaatgcagatccaatcaatgactttg 28228463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 33259362 - 33259287
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgtt 162  Q
    ||||||||||| ||| |||| |||||||||||||| || | ||||||||||||  ||||||||||  |||||||||    
T  33259362 tcttagtgcgatgttattttcttcgtcgtctttgtgcgttgttgtttgtcttttccgtcttattaccgtgtttgtt 33259287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 803070 - 802956
Alignment:
Q  108 ttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatc 207  Q
    ||||||||||| ||  ||||||| ||||||||   ||||| ||  || |||||||||||||| ||||||||| ||  || |||||| |||||||  ||||    
T  803070 ttcgtcgtcttagtgtgatattgcttgtctttactgtcttgtttaggcgtttgttcggttcagattgttagaccatcttcgatcaagtgcagatctaatc 802971  T
Q  208 aatgactttgatgtc 222  Q
    |||||||||| ||||    
T  802970 aatgactttggtgtc 802956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 29734301 - 29734431
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||| |||||||||||||| |||||| ||||||||  ||||||||| |||| || |  ||   |  |||||||| |||| ||||| ||||||| ||    
T  29734301 tcttagtgtgacgttgttttgtttgtcgtcgttgtacgacgttgtttgtccttctggtttcgttcaaggatttgttcgattcagattgtcagatcaactt 29734400  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  29734401 cgatccagtgcagatcaaatcaatgactttg 29734431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 2251348 - 2251296
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||||||||||| ||||||||| ||||||||||| |||  ||||||||||||    
T  2251348 tcttagtgcgacgctgttttgtttgtcgtctttgtgcgacgttgtttgtcttt 2251296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 17095488 - 17095436
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    |||| |||||||||||||||||||||||||||||| |  | ||||||||||||    
T  17095488 tctttgtgcgacgttgttttgttcgtcgtctttgtgcagtgttgtttgtcttt 17095436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 35353754 - 35353881
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||| ||||||||||| |||    ||||||||||  | |||| ||  ||||||||||| | | | ||||| ||||||  ||    
T  35353754 tcttagtgcgacgttgttttgtttgtcgtctttgtgcga---cgtttgtcttttccctcttgttcaggtgtttgttcagattagattgtcagatcatctt 35353850  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| ||| |||||||||||    
T  35353851 cgatccagtgcagatccaaccaatgactttg 35353881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 43711540 - 43711575
Alignment:
Q  184 ttttgatcaattgcagattcaatcaatgactttgat 219  Q
    |||||||||| |||||||||||||||||||||||||    
T  43711540 ttttgatcaagtgcagattcaatcaatgactttgat 43711575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 3397982 - 3397852
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||| |||||||||  ||| ||||||| |||  |||||| |||||  | |||| ||  |||||||||||  |||| ||||| ||||||  ||    
T  3397982 tctttgtgcgacattgttttgtctgtcatctttgtgcgactttgtttatcttttccctcttgttcaggtgtttgttcaattcagattgtcagatcatctt 3397883  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||||||| |||||||||||    
T  3397882 cgatccagtgcagattcaaccaatgactttg 3397852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 10589178 - 10589212
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgt 121  Q
    |||||||| ||||||||||||||||||||||||||    
T  10589178 tcttagtgtgacgttgttttgttcgtcgtctttgt 10589212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 13547008 - 13547134
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||||||||||||||| ||||||| |||||||||||  || ||||||| ||||| | ||||| ||  | ||||||||   |||| ||||| | ||||| |    
T  13547008 atcttagtgcgacgttattttgtttgtcgtctttgtgtgacattgtttatctttattgtcttgtttagatgtttgtttcattcatattgtcatatcaagt 13547107  T
Q  186 ttgatcaattgcagattcaatcaatga 212  Q
    |||||  | ||||  ||||||||||||    
T  13547108 ttgatgcagtgcatgttcaatcaatga 13547134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 16879968 - 16879914
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| |||||    
T  16879968 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttct 16879914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 16992101 - 16992047
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| |||||    
T  16992101 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttct 16992047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 25771556 - 25771610
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| |||||    
T  25771556 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttct 25771610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 41842059 - 41842093
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgt 121  Q
    |||||||||||||||| ||||||||||||||||||    
T  41842059 tcttagtgcgacgttggtttgttcgtcgtctttgt 41842093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 32341897 - 32341840
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgt 144  Q
    |||||||| ||||||||||||||| || |||||||  ||| |||||||||||| ||||    
T  32341897 tcttagtgtgacgttgttttgttcatcatctttgtgtgatgttgtttgtctttttcgt 32341840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 3390543 - 3390591
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgt 135  Q
    |||| ||||||||||| |||||||||||||||||| |||  ||||||||    
T  3390543 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 3390591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 3603096 - 3603144
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgt 135  Q
    |||| ||||||||||| |||||||||||||||||| |||  ||||||||    
T  3603096 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 3603144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 17792682 - 17792714
Alignment:
Q  184 ttttgatcaattgcagattcaatcaatgacttt 216  Q
    |||||||||| ||||||||||||||||||||||    
T  17792682 ttttgatcaaatgcagattcaatcaatgacttt 17792714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 44441492 - 44441544
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctt 138  Q
    ||||||||||||||||  ||||||||||||||| |||||   |||||||||||    
T  44441492 atcttagtgcgacgtttgtttgttcgtcgtcttcgtacggcgttgtttgtctt 44441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 32061905 - 32062035
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||  | |||| ||  ||||||||||||||||| ||||| ||||||  ||    
T  32061905 tcttagtgcgacgctgttttgtttgtcgtctttgtgcgacattgtttgtcttttccctcttgttcaggtgtttgttcggttcagattgtcagatcagctt 32062004  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||||| ||||||| ||| |||||||||||    
T  32062005 cgatcaagtgcagatccaaccaatgactttg 32062035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 37659077 - 37659208
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||| |||||| || |  ||   || ||||||||||||| ||||| ||||||  ||    
T  37659077 tcttagtgcgaccttgttttgttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaagtatttgttcggttcagattgtcagatcagctt 37659176  T
Q  187 tgatcaattgcagattcaatcaatgactttga 218  Q
     |||| | |||||||  |||||||||||||||    
T  37659177 cgatccagtgcagatcaaatcaatgactttga 37659208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 32256724 - 32256594
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||| ||||||||||| ||||||||||| |||  |||||||||||||| || || ||  ||| ||||||||||| | ||||||| ||||  ||    
T  32256724 tcttagtgcgatgttgttttgtttgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggtttagattgttaaatcagctt 32256625  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||||  |||||||  ||||||||||||||    
T  32256624 cgatcatgtgcagatcaaatcaatgactttg 32256594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 11298761 - 11298633
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttg 188  Q
    ||||||||||||||||||||| ||||||||||| ||   ||||||||||||  | |||| ||  ||||||||||||| ||| ||||| |||| |  ||||    
T  11298761 ttagtgcgacgttgttttgtttgtcgtctttgtgcggcgttgtttgtcttttccctcttgttcaggtgtttgttcggatcagattgtcagattagctttg 11298662  T
Q  189 atcaattgcagattcaatcaatgactttg 217  Q
    ||| | ||||||| ||| |||||||||||    
T  11298661 atccagtgcagatccaaccaatgactttg 11298633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 8054810 - 8054680
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||||||||| || |   |  ||| |||| |||||||| ||||| ||||||  ||    
T  8054810 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctt 8054711  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  8054710 cgatccagtgcagatccaatcaatgactttg 8054680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 12244220 - 12244084
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    ||||||||||||||||||||||||||||  |||||| ||   ||||||||| || | || |  ||  ||| |||||||| |||| ||||| | ||||  |    
T  12244220 atcttagtgcgacgttgttttgttcgtcaactttgtgcggcgttgtttgtcgtttttgtttcgttcaggtatttgttcgattcagattgtcatatcagct 12244121  T
Q  186 ttgatcaattgcagattcaatcaatgactttgatgtc 222  Q
    |||||| | ||||||| ||||||||||||||||||||    
T  12244120 ttgatccaatgcagatccaatcaatgactttgatgtc 12244084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 14327590 - 14327685
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatca 182  Q
    ||||||||||||||||||||||| ||||||||||| |||  ||||||||||||  | | || ||   |||||||||||||||| ||||| ||||||    
T  14327590 tcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcccttttgttcaagtgtttgttcggttcagattgtcagatca 14327685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 3925693 - 3925563
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||| || ||||||| |||||||||||||| |||  ||||||| |||||| || | |||  ||| |||||||| |||| || || ||||||  ||    
T  3925693 tcttagtgcaaccttgtttttttcgtcgtctttgtgcgaccttgtttgcctttcttgtttcattcaggtatttgttcgattcagatagtcagatcagctt 3925594  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||||| |||||||  ||||||||||||||    
T  3925593 cgatcaagtgcagatcaaatcaatgactttg 3925563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 12248717 - 12248663
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  12248717 tcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtctttct 12248663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 17019229 - 17019359
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||||||| |||||||||||||||||| |  | |||||||||||||| || | ||    || ||||||||| ||| ||| | |||| || ||    
T  17019229 tcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatctaagtatttgttcggatcagattttcagattaactt 17019328  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | ||||||| |||||||||| ||||    
T  17019329 tgatccaatgcagatccaatcaatgattttg 17019359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 17549666 - 17549796
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||||||| |||||||||||||||||| |  | |||||||||||||| || | ||    || ||||||||| ||| ||| | |||| || ||    
T  17549666 tcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatctaagtatttgttcggatcagattttcagattaactt 17549765  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | ||||||| |||||||||| ||||    
T  17549766 tgatccaatgcagatccaatcaatgattttg 17549796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 18197132 - 18197018
Alignment:
Q  104 tttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattc 203  Q
    |||||| ||||||||||| || ||||||||||||| |||||||| ||  |||||||||||  |||||||| |  ||||  ||| |||| | ||||||| |    
T  18197132 tttgtttgtcgtctttgttcggtattgtttgtcttcctcgtcttgttcaggtgtttgttcaattcaaattttcggatcggtttcgatctagtgcagatcc 18197033  T
Q  204 aatcaatgactttga 218  Q
    || ||||||||||||    
T  18197032 aaccaatgactttga 18197018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 222
Target Start/End: Complemental strand, 30141352 - 30141220
Alignment:
Q  88 cttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatttt 187  Q
    |||||||||| ||||||| ||| ||||| |||||| ||  |||||||||||||| ||||| ||| ||||||||||  ||| || ||||| |||||||||     
T  30141352 cttagtgcgatgttgttt-gtttgtcgtttttgta-gactttgtttgtctttcttgtcttgttaaggtgtttgttacgtttaatttgtttgatcaattta 30141255  T
Q  188 gatcaattgcagattcaatcaatgactttgatgtc 222  Q
     ||  | || ||||||||| |||||||||||||||    
T  30141254 aatagaatgtagattcaattaatgactttgatgtc 30141220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 31713079 - 31712949
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| |||||| ||||||||||||||||||||||| |||  |||||||||||||| |  |  ||  ||| ||||||||||||| ||||| | ||||  ||    
T  31713079 tctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcagctt 31712980  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  31712979 cgatccagtgcagatcaaatcaatgactttg 31712949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 5917745 - 5917692
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttc 140  Q
    ||||||||||||||||| ||||||||||||||||| |||  |||||||||||||    
T  5917745 tcttagtgcgacgttgtgttgttcgtcgtctttgtgcgacgttgtttgtctttc 5917692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 26937636 - 26937765
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||| ||||| ||||||||||| |||||| ||   |||||||||||||| || |  ||  ||| ||| ||||||||| ||||| ||||||  ||    
T  26937636 tcttagtgcgtcgttggtttgttcgtcgactttgtgcggcgttgtttgtctttcttgtttcgttcaggtatttattcggttcagattgtcagatcagctt 26937735  T
Q  187 tgatcaattgcagattcaatcaatgacttt 216  Q
    ||||| | |||| || ||||||||||||||    
T  26937736 tgatctagtgcaaatccaatcaatgacttt 26937765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 36556022 - 36555943
Alignment:
Q  95 cgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgt 175  Q
    ||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||| ||  |||||| ||||||||||||||||    
T  36556022 cgacgttgttt-gtttgtcgtctttgtgcgaaattgtttgtttttcccgtcttgttcaggtgttggttcggttcaaattgt 36555943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 44295427 - 44295558
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| || ||||| ||||| ||||||  ||    
T  44295427 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagctt 44295526  T
Q  187 tgatcaattgcagattcaatcaatgactttga 218  Q
     |||| | ||||||| ||||||||||||||||    
T  44295527 cgatccagtgcagatccaatcaatgactttga 44295558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 10042883 - 10043013
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||| |||||||||||||||| ||||| || |||  || ||||||||||| || |  ||  ||| ||||||| ||||||||||| ||||||  ||    
T  10042883 tcttagtgcaacgttgttttgttcgttgtcttagtgcgacgttatttgtctttcttgtttcgttcaggtatttgttcagttcaaattgtcagatcagctt 10042982  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||| ||||||    
T  10042983 cgatctagtgcagatcaaatcaataactttg 10043013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 32412901 - 32413031
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| ||||||| |||||||||| |||| |||||||| ||||| || |  ||  ||| |||| | |||||| ||||| ||||||  ||    
T  32412901 tcttcgtgcgacgttggtttgttcatcgtctttgtgcgatgttgtttgtttttcttgtttctttcaggtatttgattggttcagattgtcagatcagctt 32413000  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     ||||   ||||||| |||||||||||||||    
T  32413001 cgatcctgtgcagatccaatcaatgactttg 32413031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 16937342 - 16937289
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttc 140  Q
    |||||||||||| ||||||||||| |||||||||| ||| |||||||| |||||    
T  16937342 tcttagtgcgaccttgttttgttcatcgtctttgtgcgacattgtttgcctttc 16937289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 2629025 - 2629077
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||||||||| |||||| |||| ||||||| ||| |||||||||||||||    
T  2629025 ttagtgcgacgttattttgtccgtcatctttgtgcgacattgtttgtctttct 2629077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 1215342 - 1215214
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||| |||||||||||||| ||| ||||||| |||  |||||| ||||| ||  ||| ||  |||| ||||||| |||| ||||| | ||||  ||    
T  1215342 tcttagtgtgacgttgttttgtttgtcatctttgtgcgacgttgtttatctttttc--cttgttcaggtggttgttcgattcagattgtcaaatcagctt 1215245  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | ||||||| ||| |||||||||||    
T  1215244 tgatctagtgcagatccaaccaatgactttg 1215214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 7269464 - 7269413
Alignment:
Q  90 tagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||||||||| |||||| ||||||||||| | | |||||||||||||||    
T  7269464 tagtgcgacgttggtttgttagtcgtctttgtgcaacattgtttgtctttct 7269413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 11655914 - 11655875
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacga 125  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  11655914 atcttagtgcgacgttgttttgttcatcgtccttgtacga 11655875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 32104833 - 32104710
Alignment:
Q  95 cgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaat 194  Q
    |||||||| |||||| ||| ||||||| | |  |||||||||||||| || |   |  ||| |||| |||||||| ||||| |||||| ||| |||| |     
T  32104833 cgacgttggtttgtttgtcatctttgtgcaacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagtttcgatccag 32104734  T
Q  195 tgcagattcaatcaatgactttga 218  Q
    |||||||||||||||| |||||||    
T  32104733 tgcagattcaatcaataactttga 32104710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 6833591 - 6833645
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||||||| |||| |||  ||||||||||||| ||| |||||||||||||||    
T  6833591 tcttagtgcgatgttggtttactcgtcgtctttgtgcgacattgtttgtctttct 6833645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 9270132 - 9270186
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| |||||    
T  9270132 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttct 9270186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 9992778 - 9992832
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||||||| ||||||||||||||||||  || ||||||||| |||||    
T  9992778 tcttcgtgcgacgttggtttgttcgtcgtctttgtgtgacattgtttgtttttct 9992832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 31874195 - 31874249
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| |||| |||||| |||||||||||||||||| ||| ||||||||| |||||    
T  31874195 tctttgtgcaacgttggtttgttcgtcgtctttgtgcgacattgtttgtttttct 31874249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 13977515 - 13977548
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgta 122  Q
    |||||||||| |||||||||||||||||||||||    
T  13977515 ttagtgcgacattgttttgttcgtcgtctttgta 13977548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 5328133 - 5328193
Alignment:
Q  157 tttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttg 217  Q
    |||| |||||||| ||||| ||||||  ||||||| | ||||||| |||||||||||||||    
T  5328133 tttgatcggttcagattgtcagatcagctttgatctagtgcagatccaatcaatgactttg 5328193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 5989743 - 5989795
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||||| | |||||||||||||||| ||   ||||||||||||||    
T  5989743 ttagtgcgacgttggtatgttcgtcgtctttgtgcggcgttgtttgtctttct 5989795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 7281127 - 7281079
Alignment:
Q  90 tagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctt 138  Q
    ||||||||| ||| |||||||||||||||||| | | ||||||||||||    
T  7281127 tagtgcgacattggtttgttcgtcgtctttgtgcaacattgtttgtctt 7281079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 27534415 - 27534287
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| |||||||||| ||||||||||| ||   |||||||| |||  | |||| ||  ||||||||||| | ||| ||||| |||| |  ||    
T  27534415 tcttagtgcgacattgttttgtttgtcgtctttgtgcggcgttgtttgtgttttccctcttgtttaggtgtttgttcagatcagattgtcagattagctt 27534316  T
Q  187 tgatcaattgcagattcaatcaatgactt 215  Q
     |||| | ||||||| ||| |||||||||    
T  27534315 cgatccagtgcagatccaaccaatgactt 27534287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 20146219 - 20146092
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||| ||||||||||||||   ||||||||||||| | |||| ||  |||||||||||||||   ||||||||||||  ||    
T  20146219 tcttagtgcgacgttgttttgtttgtcgtctttgtacggcgttgtttgtctttcccctcttgttcaggtgtttgttcggtt---attgttagatcagctt 20146123  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  20146122 cgatctagtgcagatccaatcaatgactttg 20146092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 22397551 - 22397421
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  | |  ||  ||| |||||||| |||| ||||| ||||||  ||    
T  22397551 tcttagtgcgacgttgttttgttcgtcgtctttgtgcgacattgtttgtctttcttatttcgttcaggtatttgttcgattcagattgtcagatcagctt 22397452  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  22397451 cgatctagtgcagatcaaatcaatgactttg 22397421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 35455204 - 35455338
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||| ||||||||||||||| ||| | |||||| |||||||||||| |||| |||||| ||  |||||||||||||||||| || | ||||||  ||    
T  35455204 tcttagtccgacgttgttttgtttgtcatttttgtatgatattgtttgtttttcccgtctt-ttcaggtgtttgttcggttcaagttttcagatcagctt 35455302  T
Q  187 tgatcaattgcagattcaatcaatgactttgatgtc 222  Q
     |||| | || ||||||||||||| |||||| ||||    
T  35455303 cgatcgaatgtagattcaatcaataactttggtgtc 35455338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 20270825 - 20270955
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||| |||||| || |  ||  ||| ||||||||||||| ||||| ||||||  ||    
T  20270825 tcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagctt 20270924  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
      ||| | |||||||  ||||||||||||||    
T  20270925 caatccagtgcagatcaaatcaatgactttg 20270955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 8812154 - 8812026
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||||||||||||||||||||||||||  ||  |||||||||||||| || || ||  ||| ||||||||||||| ||||| ||||||  ||    
T  8812154 tcttagtgcgacgttgttttgttcgtcgtctttgtggga-gttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcagatcagctt 8812056  T
Q  187 tgatcaattgcagattcaatcaatgacttt 216  Q
     | || | |||||||  |||||||||||||    
T  8812055 cggtccagtgcagatcaaatcaatgacttt 8812026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 6074739 - 6074609
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||| ||  ||||||||| ||||||||||| |||  ||||||||||||  | |||| ||   |||||||||||||||| ||||| ||||||| ||    
T  6074739 tcttagtgcaacactgttttgtttgtcgtctttgtgcgaccttgtttgtcttttccctcttgttcaagtgtttgttcggttcagattgtcagatcaactt 6074640  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | || |||| |||||||||||||||    
T  6074639 cgatccagtgtagatccaatcaatgactttg 6074609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 9034945 - 9034815
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| ||||||| |||||||||| ||| ||||| ||||||||| || |   |  ||| |||| |||||||| ||||| |||||| |||    
T  9034945 tcttcgtgcgacgttggtttgttcctcgtctttgtgcgacattgtctgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagttt 9034846  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  9034845 cgatctagtgcagatccaatcaatgactttg 9034815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 6647916 - 6647788
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||| |||  | |||||||||||||| ||   |||||||||||||| || |||||  | | ||||||||||||| ||||| || |||  ||    
T  6647916 tcttagtgcgacgatgtgctattcgtcgtctttgtgcggcgttgtttgtctttcttgttttattcagctatttgttcggttcagattgtcaggtcagctt 6647817  T
Q  187 tgatcaattgcagattcaatcaatgactt 215  Q
     |||||| ||||||| |||||||||||||    
T  6647816 agatcaagtgcagatccaatcaatgactt 6647788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 2415517 - 2415640
Alignment:
Q  93 tgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatca 192  Q
    |||||||||| ||||||||| |||||||| ||| ||||||||||||| | ||    ||  ||| ||||||||||||| ||||| ||||||  || ||||     
T  2415517 tgcgacgttggtttgttcgttgtctttgtgcgacattgtttgtcttttttgttactttcaggtatttgttcggttcagattgtcagatcagcttcgatcc 2415616  T
Q  193 attgcagattcaatcaatgacttt 216  Q
    | ||||||||||||||| ||||||    
T  2415617 agtgcagattcaatcaacgacttt 2415640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 13079256 - 13079310
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||||| |||||||||| |||||||||||||| ||| |||||||||||||||    
T  13079256 tcttagtgcaacgttgttttattcgtcgtctttgtgcgacattgtttgtctttct 13079310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 18472728 - 18472599
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||| ||| |||||| |||| |||||||||| |||  |||||||||||||| || | |||  ||| |||||||| |||| ||||| ||||||| ||    
T  18472728 tcttagtgtgactttgttt-gttcctcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagattgtcagatcaactt 18472630  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  18472629 cgatccagtgcagatcaaatcaatgactttg 18472599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 25770741 - 25770847
Alignment:
Q  111 gtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaat 210  Q
    ||||||||||| ||| |||||||||||||| |||||| ||   |||||||  | ||||||||||| |||||| ||  |||| | ||||||||||||| ||    
T  25770741 gtcgtctttgtgcgacattgtttgtctttcccgtcttgttcaagtgtttgcccagttcaaattgtcagatcagttccgatccagtgcagattcaatcgat 25770840  T
Q  211 gactttg 217  Q
    |||||||    
T  25770841 gactttg 25770847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 33486572 - 33486518
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  33486572 tcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtctttct 33486518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 41358150 - 41358244
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatc 181  Q
    |||||||||||| |||||||||||||||| ||||| ||   |||||||||||||| || ||| |  ||| ||||||||||||| ||||| |||||    
T  41358150 tcttagtgcgacattgttttgttcgtcgtgtttgtgcggcgttgtttgtctttcttgttttaattaggtatttgttcggttcagattgtcagatc 41358244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 41554598 - 41554728
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| ||||||| ||||||||| |||| |||  |||||||||||||| || |   |  ||| ||||||||||||| ||||| ||||||  ||    
T  41554598 tcttagtgcgaccttgttttattcgtcgtccttgtgcgacgttgtttgtctttcttgtttcgctcaggtatttgttcggttcagattgtcagatcagctt 41554697  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  41554698 cgatccagtgcagatcaaatcaatgactttg 41554728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 15710652 - 15710777
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||||||||||||||||||| |||||| ||||||||  |   |||||||||||||| || |  ||  ||| |||||||||||| |||||| ||||||  |    
T  15710652 atcttagtgcgacgttgtttcgttcgttgtctttgtgtggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttcgaattgtcagatcagct 15710751  T
Q  186 ttgatcaattgcagattcaatcaatg 211  Q
    | |||| | ||||||| |||||||||    
T  15710752 tagatctagtgcagatccaatcaatg 15710777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 8957327 - 8957446
Alignment:
Q  97 acgttgttttgttcgtcgtctttgtacgatattgtttgtcttt-ctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaatt 195  Q
    ||||||||||||| || |||||||| |||  |||||||||||| ||| |||| ||  ||||||||||| ||||| ||||| ||||||  || |||| | |    
T  8957327 acgttgttttgtttgttgtctttgtgcgacgttgtttgtcttttctc-tcttgttcaggtgtttgttcagttcagattgtcagatcagcttcgatccaat 8957425  T
Q  196 gcagattcaatcaatgacttt 216  Q
    |||||||||| ||||||||||    
T  8957426 gcagattcaaccaatgacttt 8957446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 31645940 - 31646075
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| || || || |   |  ||| |||| || ||||| ||||| ||||||| ||    
T  31645940 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcagttcagattgtcagatcaactt 31646039  T
Q  187 tgatcaattgcagattcaatcaatgactttgatgtc 222  Q
     |||| | ||||||| ||||||||||||||| ||||    
T  31646040 cgatccagtgcagatccaatcaatgactttggtgtc 31646075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 40774871 - 40775002
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgt-ttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||||||||||||||||||||| |||||||||||| | |  |||| |||||||||| || |  ||  ||| ||||||||||||| ||||| ||||||  |    
T  40774871 tcttagtgcgacgttgttttgtccgtcgtctttgtgcaaccttgtattgtctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagct 40774970  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    | |||| | || ||||  ||||||||||||||    
T  40774971 tcgatccagtgtagatcaaatcaatgactttg 40775002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 13007803 - 13007857
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||||| |||||||||| |||||||||||||| |||  ||||||||||||||    
T  13007803 tcttagtgcaacgttgttttattcgtcgtctttgtgcgacgttgtttgtctttct 13007857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 29310357 - 29310227
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| || ||||||||| | ||||||  ||    
T  29310357 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcaaattatcagatcagctt 29310258  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  29310257 cgatccagtgcagatccaatcaatgactttg 29310227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 34866538 - 34866575
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacg 124  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  34866538 tcttagtgcgacgttattttgttcgtcgtctttgtacg 34866575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 41988263 - 41988315
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||||||||||||||||||||| ||||||||||| ||   ||||||||||||    
T  41988263 tcttagtgcgacgttgttttgtttgtcgtctttgtgcggctttgtttgtcttt 41988315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 6887181 - 6887051
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttat-tatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| | ||| | |  ||| |||| || ||||| |||||||||| |  |    
T  6887181 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttg-cttctctcaggtatttgatcagttcagattgttagattagct 6887083  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    | |||| | ||||||| |||||||||||||||    
T  6887082 tcgatccagtgcagatccaatcaatgactttg 6887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 37425135 - 37425189
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| |||||||||||||||||| ||||||||||| |||  ||||||||| ||||    
T  37425135 tctttgtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcattct 37425189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 24288927 - 24288874
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctc 142  Q
    ||||||| | |||| |||||||||||||||||||||   |||||||||||||||    
T  24288927 ttagtgcaatgttgatttgttcgtcgtctttgtacggcgttgtttgtctttctc 24288874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 24373295 - 24373348
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctc 142  Q
    ||||||| | |||| |||||||||||||||||||||   |||||||||||||||    
T  24373295 ttagtgcaatgttgatttgttcgtcgtctttgtacggcgttgtttgtctttctc 24373348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 32390648 - 32390564
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaatt 173  Q
    |||||||||||||| || ||| || |||||||| ||   |||||||||||||| || | |||  ||| |||||||||||||||||    
T  32390648 ttagtgcgacgttggttcgtttgttgtctttgtgcggcgttgtttgtctttcttgtttcattcgggtatttgttcggttcaaatt 32390564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 40565158 - 40565106
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||||||||||  ||||||||| ||||||||||| |||  ||||||||||||    
T  40565158 tcttagtgcgaccatgttttgtttgtcgtctttgtgcgacgttgtttgtcttt 40565106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 9e-23; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 772554 - 772684
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| || |  ||  ||| ||||||||||||| ||||| ||||||  ||    
T  772554 tcttagtgcgacgttgttttgtctgtcgtctttgtgcgatattgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagctt 772653  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
      ||| | ||||||| |||||||||||||||    
T  772654 caatctagtgcagatccaatcaatgactttg 772684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 28015468 - 28015598
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||| |||||| |||||||||||||||||||||| |||  ||||||| |||||| || |  ||  ||| ||||||||||||| ||||||||||||  ||    
T  28015468 tcttaatgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgttagatcagctt 28015567  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  28015568 cgatccagtgcagatcaaatcaatgactttg 28015598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 30992826 - 30992695
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||||||||| |  |   |  ||| |||| |||||||| ||||| ||||||| ||    
T  30992826 tcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacgttgtttgtctttcttggttctctcaggtatttgatcggttcagattgtcagatcaactt 30992727  T
Q  187 tgatcaattgcagattcaatcaatgactttga 218  Q
     |||| | ||||||| ||||||||||||||||    
T  30992726 cgatctagtgcagatccaatcaatgactttga 30992695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 34893222 - 34893276
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  34893222 tcttagtgcgtcgttgttttgttcgtcgtctttgtacaatcttgtttgtctttct 34893276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 43483711 - 43483765
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  43483711 tcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttct 43483765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 32312678 - 32312803
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||| ||||||||||||||||||||||||| | || ||||| ||||||||| |||| ||   ||||||||| | |||| ||||| | ||||  ||    
T  32312678 tcttagtgcaacgttgttttgttcgtcgtctttgtgcaatgttgttagtctttctcatcttgttcatgtgtttgtttgattcatattgtcatatcagctt 32312777  T
Q  187 tgatcaattgcagattcaatcaatga 212  Q
     |||||| |||| || ||||||||||    
T  32312778 cgatcaagtgcatatccaatcaatga 32312803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 43098688 - 43098819
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||| ||||||||||||| || ||||| | ||| ||||||||||||||  ||||| ||   | ||||||| |||| | ||||| ||||||| ||    
T  43098688 tcttagtgcggcgttgttttgttcttcatctttatgcgacattgtttgtctttcatgtcttgttcatgcgtttgtttggtttagattgtgagatcaactt 43098787  T
Q  187 tgatcaattgcagattcaatcaatgactttga 218  Q
    ||||| |  | | |||||||||||||||||||    
T  43098788 tgatctagggaaaattcaatcaatgactttga 43098819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 5025059 - 5024929
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||| |||||||||||||||||||||| |||  ||||||  ||||||  | | |||  ||| ||||||||||||| ||||| ||||||  ||    
T  5025059 tcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgttttcctttcttatttcatttaggtatttgttcggttcagattgtcagatcagatt 5024960  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | | |||||  ||||||||||||||    
T  5024959 cgatccagtccagatcaaatcaatgactttg 5024929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 40775378 - 40775508
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| |||||||| ||||| ||||||  ||    
T  40775378 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctt 40775477  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  40775478 cgatctagtgcagatccaatcaatgactttg 40775508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 43807153 - 43807023
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| |||||| |||| |||||||||| ||||||| |||  |||||||||||||| || |   |  |||||||| |||||||| ||||| ||||||  ||    
T  43807153 tcttcgtgcgatgttggtttgttcgtcatctttgtgcgacgttgtttgtctttcttgtttctctcaggtgtttgatcggttcagattgtaagatcagctt 43807054  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  43807053 cgatctagtgcagatccaatcaatgactttg 43807023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 14734052 - 14733962
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttaga 179  Q
    ||||||||||||||||||||||| ||||||||||| |||  ||||||||||||  |  ||| ||  |||||||||||| |||| |||||||||    
T  14734052 tcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcc--cttgttcaggtgtttgttcgattcagattgttaga 14733962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 9933958 - 9934084
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||||||||||||||| |||    |||||||||||| || |  ||  ||| |||||| | |||| ||||| ||||||  ||    
T  9933958 tcttagtgcgacgttgttttgttcgtcgtctttgtgcga---cgtttgtctttcttgtttcgttcaggtatttgtt-gattcagattgtcagatcagctt 9934053  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | |||||||  ||||||||||||||    
T  9934054 tgatccagtgcagatcaaatcaatgactttg 9934084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 34594525 - 34594473
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||||||||| ||||||||||| ||||||||||| ||| |||||||||||||    
T  34594525 tcttagtgcgaagttgttttgtttgtcgtctttgtgcgacattgtttgtcttt 34594473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 215
Target Start/End: Original strand, 47749845 - 47749973
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| |||||||| ||||| |||||| |||    
T  47749845 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagttt 47749944  T
Q  187 tgatcaattgcagattcaatcaatgactt 215  Q
     |||| | ||||||| ||||| |||||||    
T  47749945 cgatccagtgcagatccaatcgatgactt 47749973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 8319434 - 8319556
Alignment:
Q  95 cgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaat 194  Q
    |||||||| |||||||||||||||||| | |  |||||||||||||| || |   |  ||  |||| |||||||| ||||||||||||  ||||||| |     
T  8319434 cgacgttggtttgttcgtcgtctttgtgcaaccttgtttgtctttcttgtttctctcaggcatttgatcggttcagattgttagatcagctttgatccag 8319533  T
Q  195 tgcagattcaatcaatgactttg 217  Q
    ||||||  |||||||||||||||    
T  8319534 tgcagacccaatcaatgactttg 8319556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 13008676 - 13008622
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||||||| |||||||||||||||||| ||   ||||||||||||||    
T  13008676 tcttagtgcgacgttggtttgttcgtcgtctttgtgcggcgttgtttgtctttct 13008622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 26017661 - 26017531
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| |||||| |||| |||||||||||||||||| |||  |||||||||||||| || |   |  ||| |||| |||||||| ||||| | ||||  ||    
T  26017661 tcttcgtgcgatgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcatatcagctt 26017562  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  26017561 cgatccagtgcagatccaatcaatgactttg 26017531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 41748489 - 41748400
Alignment:
Q  128 ttgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttg 217  Q
    |||||||||||||| || || ||  ||| ||||||||||||| || || ||||||| || |||||| |||||||  ||||||||||||||    
T  41748489 ttgtttgtctttcttgttttgtttgggtatttgttcggttcagatcgtcagatcaacttcgatcaaatgcagatcaaatcaatgactttg 41748400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 14707693 - 14707823
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    ||||||||| | ||||| |||||| ||||| ||||| ||   |||||||||||||| || | |||  ||| |||||||| ||||||||||  |||||  |    
T  14707693 atcttagtgtggcgttggtttgttagtcgtttttgtgcggcgttgtttgtctttcttgtttcatttaggtatttgttcgattcaaattgtctgatcatct 14707792  T
Q  186 ttgatcaattgcagattcaatcaatgacttt 216  Q
    | |||| | ||||||| |||| |||||||||    
T  14707793 tcgatccaatgcagatccaattaatgacttt 14707823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 21552458 - 21552328
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||| ||| ||||||||| |  ||  ||||||||||||  | |||| ||   ||||||| |||||||| ||||| |||||   ||    
T  21552458 tcttagtgcgacgttgtttcgtttgtcgtctttatgtgacgttgtttgtcttttccctcttgtttaagtgtttgatcggttcagattgtcagatccgctt 21552359  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| ||| |||||||||||    
T  21552358 cgatccactgcagatccaaccaatgactttg 21552328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 27706578 - 27706504
Alignment:
Q  101 tgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgt 175  Q
    |||||||| ||| || ||||| |||||||||||||||||||| |||| ||   ||||||||||| |||| |||||    
T  27706578 tgttttgtccgttgtgtttgtgcgatattgtttgtctttctcatcttgttcaagtgtttgttcgattcagattgt 27706504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 35562534 - 35562607
Alignment:
Q  144 tcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttg 217  Q
    |||| ||| |||||||| |||||||||||||| | | ||| ||| ||| | |||| ||||||||||||||||||    
T  35562534 tcttgttacggtgtttgctcggttcaaattgtcaaaccaactttaatccaatgcacattcaatcaatgactttg 35562607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 23843427 - 23843297
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtct-tattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||||||||| || | | ||| ||| |||| |||||||| ||||| ||||||  |    
T  23843427 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctta-ggtatttgatcggttcagattgtcagatcagct 23843329  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    | |||| | |||||||||||||||||||||||    
T  23843328 tcgatccagtgcagattcaatcaatgactttg 23843297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 8644355 - 8644486
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    ||||||||||||| ||||  |||| ||||||||||| ||   ||| |||||||||| || || ||  ||| |||||| |||||| |||||  |||||| |    
T  8644355 atcttagtgcgacattgtgctgttggtcgtctttgtgcggcgttgcttgtctttcttgttttgttcaggtatttgtttggttcagattgtctgatcaact 8644454  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    | |||| |||||||||||||||||||||||||    
T  8644455 tagatccattgcagattcaatcaatgactttg 8644486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 13234111 - 13233981
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| |||||||||||||| |||||| |||    
T  13234111 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcaaattgtcagatcagttt 13234012  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||| ||||    
T  13234011 cgatctagtgcagatccaatcaatgattttg 13233981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 222
Target Start/End: Complemental strand, 33541532 - 33541399
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||| |||| ||||||||| ||||||||||| |||| ||||||||||||  |  ||| ||  |||||||||| | |||| ||||||||||||  ||    
T  33541532 tcttagtgtgacgctgttttgtttgtcgtctttgtgcgatgttgtttgtcttttcc--cttgttcaggtgtttgttagattcagattgttagatcagctt 33541435  T
Q  187 tgatcaattgcagattcaatcaatgactttgatgtc 222  Q
     | || | ||||||| ||| ||||||||||| ||||    
T  33541434 cgttccagtgcagatccaaccaatgactttggtgtc 33541399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 10744694 - 10744789
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatca 182  Q
    |||||||||||| |||||||||||||||||||||| |||  ||||||| |||||| |  |  ||  ||| ||||||||||||| ||||| ||||||    
T  10744694 tcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttggttcgtttaggtatttgttcggttcagattgtcagatca 10744789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 32804406 - 32804541
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||| || |||| ||||||| ||||||||||| |   |||||||||||||| || |  ||   || |||||| | |||| ||||| ||||||| ||    
T  32804406 tcttagtgagatgttggtttgttcctcgtctttgtatggcgttgtttgtctttcttgtttcgttcatgtatttgtttgattcagattgtgagatcaactt 32804505  T
Q  187 tgatcaattgcagattcaatcaatgactttgatgtc 222  Q
     |||||| ||||||| ||||||||||||||| ||||    
T  32804506 cgatcaagtgcagatccaatcaatgactttggtgtc 32804541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 34020716 - 34020769
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttc 140  Q
    ||||||||||||| ||||||||| |||||||||||||||  |||||||| ||||    
T  34020716 tcttagtgcgacgctgttttgtttgtcgtctttgtacgacgttgtttgtttttc 34020769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 19759906 - 19760029
Alignment:
Q  94 gcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtct-tattatggtgtttgttcggttcaaattgttagatcaattttgatca 192  Q
    ||||||||| ||||||| |||||||||| |||  |||||||| ||||| || | | | ||| | |||| |||||||| ||||| |||||| ||| ||||     
T  19759906 gcgacgttggtttgttcatcgtctttgtgcgacgttgtttgtatttcttgtttctctcatg-tatttgatcggttcagattgtcagatcagtttcgatcc 19760004  T
Q  193 attgcagattcaatcaatgactttg 217  Q
    | ||||||| |||||||||||||||    
T  19760005 agtgcagatccaatcaatgactttg 19760029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 222
Target Start/End: Original strand, 20496332 - 20496439
Alignment:
Q  115 tctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgact 214  Q
    |||||||||||  |||||||||||| | || || ||  ||| ||||||||||||| ||||| ||||||  || |||| | |||| || ||||||||||||    
T  20496332 tctttgtacgactttgtttgtcttttttgttttgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtgcaaatccaatcaatgact 20496431  T
Q  215 ttgatgtc 222  Q
    ||| ||||    
T  20496432 ttggtgtc 20496439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 15128156 - 15128122
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgt 121  Q
    |||||||||||||||| ||||||||||||||||||    
T  15128156 tcttagtgcgacgttggtttgttcgtcgtctttgt 15128122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 22530391 - 22530445
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||| |||||| |||||||| || ||||||| |||| ||||||||||||||    
T  22530391 tcttagtgagacgttattttgttcatcatctttgtgcgatgttgtttgtctttct 22530445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 32457757 - 32457803
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgttt 133  Q
    |||| ||||||||||| |||||||||||||||||| ||| |||||||    
T  32457757 tcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacattgttt 32457803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 7049426 - 7049487
Alignment:
Q  157 tttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttga 218  Q
    |||| |||||||| ||||| ||||||| || |||| | ||||||| ||||||||||||||||    
T  7049426 tttgatcggttcagattgtcagatcaacttcgatccagtgcagatgcaatcaatgactttga 7049487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 1144 - 1018
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||||||||||| |||||||||||| ||||| |||  ||| |||||||||| || |  ||  ||| |||||| |||||||||||| ||||||| ||    
T  1144 tcttagtgcgacgttggtttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattgtcagatcaactt 1045  T
Q  187 tgatcaattgcagattcaatcaatgac 213  Q
     |||| | ||||||| |||||||||||    
T  1044 cgatctagtgcagatccaatcaatgac 1018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 29067160 - 29067284
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||||||||||||||| |    |||||||||||||| || || ||   || ||| ||||||||||||| | ||||||  ||    
T  29067160 tcttagtgcgacgttgttttgttcgtcgtctttgtgcagcgttgtttgtctttcttgttttgttcaagtatttattcggttcaaattttcagatcagctt 29067259  T
Q  187 tgatcaattgcagattcaatcaatg 211  Q
     |||||| |||| ||||||||||||    
T  29067260 cgatcaagtgcaaattcaatcaatg 29067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 10877456 - 10877587
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    ||||||||||||||||||||||||||| ||||||||  |   |||||||||||||| || | |||   || || |||||||||| ||||| | |||| ||    
T  10877456 atcttagtgcgacgttgttttgttcgttgtctttgtgtggcgttgtttgtctttcttgtttcatttatgtattggttcggttcatattgtcatatcattt 10877555  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    |  ||| | |||||||||||||||||||||||    
T  10877556 tcaatccagtgcagattcaatcaatgactttg 10877587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 28213159 - 28213294
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||| ||||  |||||||||||||||||| ||| ||||||||||||||| || |  ||  ||| ||||||||||||| ||||| ||||||  ||    
T  28213159 tctttgtgcggcgttagtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctttcaggtatttgttcggttcagattgtcagatcagatt 28213258  T
Q  187 tgatcaattgcagattcaatcaatgactttgatgtc 222  Q
     |||| | || |||| ||||||||||||||| ||||    
T  28213259 cgatccagtgtagatccaatcaatgactttggtgtc 28213294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 44562753 - 44562622
Alignment:
Q  86 atcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaatt 185  Q
    ||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||| || |   |  ||| |||| | |||||| ||||| ||||||  |    
T  44562753 atcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgataggttcagattgtcagatcagct 44562654  T
Q  186 ttgatcaattgcagattcaatcaatgactttg 217  Q
    | |||| | ||||||| |||||||||||||||    
T  44562653 tcgatccagtgcagatccaatcaatgactttg 44562622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 12967730 - 12967600
Alignment:
Q  92 gtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatc 191  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||||||| || |   |  ||| |||| |||||||| ||||| ||||||  || ||||    
T  12967730 gtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatc 12967631  T
Q  192 aattgcagattcaatcaatgactttgatgtc 222  Q
     | |||| || ||||||||||||||| ||||    
T  12967630 cagtgcatatccaatcaatgactttggtgtc 12967600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 222
Target Start/End: Complemental strand, 33177600 - 33177466
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||| ||||||| ||||||||| | |  |||||||| ||| | || || ||   || ||||||||||||| ||||| ||||||| ||    
T  33177600 tcttagtgcgacgttgtgttgttcgccgtctttgtgcaacgttgtttgtgttttt-gttttgttcatgtatttgttcggttcagattgtcagatcaactt 33177502  T
Q  187 tgatcaattgcagattcaatcaatgactttgatgtc 222  Q
     |||| | ||||||| ||||||||||||||| ||||    
T  33177501 agatccagtgcagatccaatcaatgactttggtgtc 33177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 11121087 - 11121217
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||| ||||| ||||||||| ||||||| | |  |||||||||||||| || || ||   || ||||||||||||| ||||| ||||||  ||    
T  11121087 tcttagtgcgaggttgtgttgttcgtcatctttgtgcaacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagattgtcagatcagctt 11121186  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  11121187 cgatccagtgcagatcaaatcaatgactttg 11121217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 21326584 - 21326714
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||| ||| ||| |||||||||||||||||| |||  |||||||||||||| || ||  |  ||| |||| |||||||| ||||| ||||||  ||    
T  21326584 tcttcgtgtgacattggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttttctcaggtatttgatcggttcagattgtcagatcagctt 21326683  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  21326684 cgatccagtgcagatccaatcaatgactttg 21326714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 27469711 - 27469657
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||||||||||||||| |||||||||| |||  ||||||||||||||    
T  27469711 tcttagtgcgacgttgttttgttcatcgtctttgtgcgacgttgtttgtctttct 27469657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 52839641 - 52839771
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||||||||||||||||| |||||||  ||  |||||||||||||| || |  ||  ||| ||||||| | ||| ||||| ||||||  ||    
T  52839641 tcttagtgcgacgttgttttgttcgtcatctttgtgagacgttgtttgtctttcttgtttcgttcaggtatttgttcagctcagattgtcagatcagctt 52839740  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | |||||||  ||||||||||||||    
T  52839741 cgatccagtgcagatcaaatcaatgactttg 52839771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 13969646 - 13969512
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacga---tattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaa 183  Q
    |||||||||||||||||  |||||||||||||||| ||    |||| ||||||||| | || || ||   || ||||||||||||||||||| | ||||     
T  13969646 tcttagtgcgacgttgtgatgttcgtcgtctttgtgcggcattattttttgtctttattgttttgttcaagtatttgttcggttcaaattgtcaaatcag 13969547  T
Q  184 ttttgatcaattgcagattcaatcaatgactttga 218  Q
     || |||| | ||||||| ||||||||||||||||    
T  13969546 cttagatccagtgcagatccaatcaatgactttga 13969512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 22344915 - 22344784
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| || ||||| ||||| ||||||  ||    
T  22344915 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagctt 22344816  T
Q  187 tgatcaattgcagattcaatcaatgactttga 218  Q
     |||| | ||||||| ||||||||||||||||    
T  22344815 cgatccagtgcagatccaatcaatgactttga 22344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 26199691 - 26199745
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||| |||||||||||||||||||||| |||  |||||| |||||||    
T  26199691 tcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttatctttct 26199745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 36621463 - 36621593
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||| ||||| |||||| ||||||||||| ||| || |||||| ||||| || |  ||  ||| |||| |||||||| ||||| | ||||| ||    
T  36621463 tcttcgtgcggcgttggtttgtttgtcgtctttgtgcgacatagtttgtttttcttgtttctttcaggtatttgatcggttcagattgtcacatcaactt 36621562  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
    ||||| | |||| || |||||||||||||||    
T  36621563 tgatccagtgcaaatccaatcaatgactttg 36621593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 2350733 - 2350814
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttc 168  Q
    ||||||||||||||||||||||| ||||||| ||| |||  ||||||||||||  | | || ||  ||||||||||||||||    
T  2350733 tcttagtgcgacgttgttttgttggtcgtctctgtgcgacgttgtttgtcttttcccttttgttcaggtgtttgttcggttc 2350814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 34039568 - 34039443
Alignment:
Q  97 acgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattg 196  Q
    |||||||||||||| |||||||||| |||  || ||| | ||| | | ||| ||  |||||||||| |||||||||||| | ||||| ||  ||| | ||    
T  34039568 acgttgttttgttcctcgtctttgtgcgacgttatttatgttttttggcttgttcaggtgtttgtttggttcaaattgtcatatcaacttcaatctagtg 34039469  T
Q  197 cagattcaatcaatgactttgatgtc 222  Q
    | |||||||||||||| |||||||||    
T  34039468 cggattcaatcaatgaatttgatgtc 34039443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 37662321 - 37662373
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||||||||||||||||||||| |||||||||||  | | ||||||||||||    
T  37662321 tcttagtgcgacgttgttttgtttgtcgtctttgtgaggtgttgtttgtcttt 37662373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 8893404 - 8893535
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||| |||| |||| ||| |||||||||||||  |   |||||||||||||| || || ||  ||| ||||||||||||| ||| | ||||||  ||    
T  8893404 tcttagtacgacattgtgttgctcgtcgtctttgtgaggcgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattttcagatcagctt 8893503  T
Q  187 tgatcaattgcagattcaatcaatgactttga 218  Q
     |||| | |||| || ||||||||||||||||    
T  8893504 agatccagtgcaaatccaatcaatgactttga 8893535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 34566799 - 34566927
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    ||||||||||||  ||||||||| ||||||||||| |||  ||||||||||||  |  ||  ||   ||||||||||| |||| ||||| |||||| |||    
T  34566799 tcttagtgcgaccctgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcc--ctggttcaagtgtttgttcgattcagattgtcagatcagttt 34566896  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| ||| |||||||||||    
T  34566897 cgatccagtgcagatccaaccaatgactttg 34566927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 35356553 - 35356467
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgtacgatattg-tttgtctttctcgtcttattatggtgtttgttcggttcaaattgt 175  Q
    ||||||| |||||| |||||||||||||||||| | || ||| ||||| |||| |||||| |||| ||||||||||| |||| |||||    
T  35356553 ttagtgcaacgttgatttgttcgtcgtctttgtgcaatgttgttttgtttttc-cgtcttgttatagtgtttgttcgattcagattgt 35356467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 48655043 - 48654992
Alignment:
Q  88 cttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtcttt 139  Q
    ||||| ||||||||| |||||||||||||||||||| |  ||||||||||||    
T  48655043 cttagcgcgacgttggtttgttcgtcgtctttgtacaacgttgtttgtcttt 48654992  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 12148051 - 12147937
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||||||| ||| ||||||||||||| || ||||| | | ||||||||||||||| || |  ||  ||| |||||||| |||| ||||| ||||||| ||    
T  12148051 tcttagtgtgactttgttttgttcgttgtttttgtgcaacattgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcaactt 12147952  T
Q  187 tgatcaattgcagat 201  Q
     |||| | |||||||    
T  12147951 cgatctagtgcagat 12147937  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 23257199 - 23257253
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| |||||    
T  23257199 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttct 23257253  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 33703513 - 33703459
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||| || |||||||||||| ||||||||||| |||  ||||||||||||||    
T  33703513 tcttagtacggcgttgttttgtttgtcgtctttgtgcgacgttgtttgtctttct 33703459  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 38644800 - 38644746
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||| ||| |||||||||||||||||| ||| ||||||||| |||||    
T  38644800 tcttcgtgcgacattggtttgttcgtcgtctttgtgcgacattgtttgtttttct 38644746  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 38646695 - 38646749
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| |||||    
T  38646695 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttct 38646749  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 40488400 - 40488366
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgt 121  Q
    ||||||||||||||||||||||| |||||||||||    
T  40488400 tcttagtgcgacgttgttttgtttgtcgtctttgt 40488366  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 49651955 - 49652009
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||| ||| ||||||  ||||||||||||||||||||||  ||||||||||||||    
T  49651955 tcttcgtgtgacgttcgtttgttcgtcgtctttgtacgacgttgtttgtctttct 49652009  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 5832351 - 5832476
Alignment:
Q  93 tgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatca 192  Q
    |||||||||| |||||||||||| ||||| |||  |||||||||||||| || |   |  ||| |||| |||||||| ||||| ||| ||  || ||||     
T  5832351 tgcgacgttggtttgttcgtcgtatttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagaccagcttcgatcc 5832450  T
Q  193 attgcagattcaatcaatgactttga 218  Q
    | |||||||  |||||||||||||||    
T  5832451 agtgcagatctaatcaatgactttga 5832476  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 10264822 - 10264951
Alignment:
Q  89 ttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttg 188  Q
    |||||||||||||| |||||||||||||||||| | |  |||||||| |||||  | |  ||  ||| |||||||| |||| ||||| ||||||| || |    
T  10264822 ttagtgcgacgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttttttcgttcaggtatttgttcgattcagattgtcagatcaacttcg 10264921  T
Q  189 atcaattgcagattcaatcaatgactttga 218  Q
    |   |||||| || |||||||| |||||||    
T  10264922 agtcattgcaaatccaatcaataactttga 10264951  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 15276448 - 15276407
Alignment:
Q  92 gtgcgacgttgttttgttcgtcgtctttgtacgatattgttt 133  Q
    ||||||||||| |||||||||||||||||| |||| ||||||    
T  15276448 gtgcgacgttggtttgttcgtcgtctttgtgcgatgttgttt 15276407  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 29069761 - 29069720
Alignment:
Q  177 agatcaattttgatcaattgcagattcaatcaatgactttga 218  Q
    |||| |||||||||||| |||| |||||||||||||||||||    
T  29069761 agattaattttgatcaagtgcatattcaatcaatgactttga 29069720  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 630781 - 630733
Alignment:
Q  93 tgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||| |||||||||||||||||| |||  ||||| ||||||||    
T  630781 tgcgacgttggtttgttcgtcgtctttgtgcgacgttgttcgtctttct 630733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 32539193 - 32539145
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgt 135  Q
    ||||||| |||||||| |||||||||||||||||| |||  ||||||||    
T  32539193 tcttagtacgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 32539145  T

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Target: scaffold0722 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 5529 - 5399
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||||||||| || |   |  ||| |||| |||||||| ||||| | ||||  ||    
T  5529 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcatattgtcatatcagctt 5430  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||| | ||||||| |||||||||||||||    
T  5429 cgatccagtgcagatccaatcaatgactttg 5399  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 191
Target Start/End: Complemental strand, 91385 - 91302
Alignment:
Q  108 ttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatc 191  Q
    ||||||||||||||||||  |||| |||||||||  | || ||||| | ||||||||||||||||||| | |||| ||||||||    
T  91385 ttcgtcgtctttgtacgacgttgtatgtctttctttttttgttatgatatttgttcggttcaaattgtcaaatcagttttgatc 91302  T

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Target: scaffold0316 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 12206 - 12076
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattt 186  Q
    |||| ||||||||||| |||||||||||||||||| |||  |||||||| ||||| || |   |  ||| |||| |||||||| ||||| ||||||  ||    
T  12206 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctt 12107  T
Q  187 tgatcaattgcagattcaatcaatgactttg 217  Q
     |||  | ||||||| |||||||||||||||    
T  12106 cgatttagtgcagatccaatcaatgactttg 12076  T

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Target: scaffold0150 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 10314 - 10260
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    |||||||||||||||| |||||||||||||||||| |  | ||||||||||||||    
T  10314 tcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttct 10260  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 126
Target Start/End: Complemental strand, 25519 - 25480
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgat 126  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  25519 tcttagtgcgacgctgttttgtttgtcgtctttgtacgat 25480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 137061 - 137007
Alignment:
Q  87 tcttagtgcgacgttgttttgttcgtcgtctttgtacgatattgtttgtctttct 141  Q
    ||||||| |||||||||||||||| |||||||||| |||  |||||||| |||||    
T  137061 tcttagtacgacgttgttttgttcatcgtctttgtgcgacgttgtttgtttttct 137007  T

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Target: scaffold0542 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 3943 - 4023
Alignment:
Q  137 tttctcgtcttattatggtgtttgttcggttcaaattgttagatcaattttgatcaattgcagattcaatcaatgactttg 217  Q
    |||||||||||||| |||||||| || | ||||||||   |||| |  ||||||||| ||||||| |||||||| ||||||    
T  3943 tttctcgtcttattgtggtgtttatttgattcaaattaaaagattatctttgatcaagtgcagatccaatcaataactttg 4023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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