View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0365_2D_low_7 (Length: 284)

Name: NF0365_2D_low_7
Description: NF0365_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0365_2D_low_7
NF0365_2D_low_7
[»] chr7 (40 HSPs)
chr7 (1-229)||(26610854-26611082)
chr7 (98-267)||(34899678-34899850)
chr7 (96-267)||(47590160-47590331)
chr7 (101-267)||(26623861-26624027)
chr7 (88-253)||(40993019-40993188)
chr7 (88-267)||(42978445-42978630)
chr7 (96-267)||(37837529-37837703)
chr7 (96-253)||(48316897-48317057)
chr7 (88-267)||(9450208-9450391)
chr7 (88-267)||(30756890-30757073)
chr7 (150-248)||(21927823-21927921)
chr7 (99-247)||(13797023-13797173)
chr7 (177-267)||(19296800-19296890)
chr7 (162-267)||(48061338-48061442)
chr7 (96-267)||(19404828-19404999)
chr7 (88-253)||(24350929-24351097)
chr7 (95-203)||(25255083-25255192)
chr7 (141-253)||(28476114-28476226)
chr7 (162-253)||(25287271-25287362)
chr7 (162-253)||(39228930-39229021)
chr7 (88-253)||(39171675-39171846)
chr7 (99-253)||(41553522-41553677)
chr7 (99-253)||(41553867-41554022)
chr7 (99-253)||(41554212-41554367)
chr7 (98-249)||(25067934-25068084)
chr7 (96-253)||(38051152-38051311)
chr7 (99-250)||(45349887-45350044)
chr7 (206-267)||(24770205-24770266)
chr7 (204-253)||(27997045-27997094)
chr7 (95-229)||(5078504-5078639)
chr7 (96-253)||(11653726-11653885)
chr7 (210-253)||(6001999-6002042)
chr7 (162-253)||(12141393-12141483)
chr7 (204-267)||(39328861-39328924)
chr7 (211-253)||(1769265-1769307)
chr7 (135-209)||(22087199-22087273)
chr7 (97-253)||(3394320-3394477)
chr7 (206-267)||(8001617-8001678)
chr7 (197-249)||(11343748-11343801)
chr7 (88-253)||(22742775-22742943)
[»] chr3 (50 HSPs)
chr3 (88-253)||(21431460-21431628)
chr3 (96-267)||(20465041-20465212)
chr3 (96-267)||(43488661-43488834)
chr3 (96-253)||(35865017-35865178)
chr3 (88-267)||(40556546-40556729)
chr3 (96-267)||(6954767-6954941)
chr3 (88-267)||(9998301-9998484)
chr3 (97-258)||(53508067-53508230)
chr3 (88-253)||(40487160-40487328)
chr3 (88-253)||(48650819-48650989)
chr3 (88-252)||(54148823-54148993)
chr3 (88-267)||(10108073-10108253)
chr3 (96-267)||(10232914-10233087)
chr3 (88-267)||(47895986-47896169)
chr3 (101-267)||(52923188-52923355)
chr3 (98-267)||(36461502-36461674)
chr3 (99-250)||(7448990-7449144)
chr3 (99-250)||(7457132-7457286)
chr3 (163-267)||(9319970-9320074)
chr3 (141-244)||(29921944-29922048)
chr3 (141-244)||(29971097-29971201)
chr3 (88-253)||(12149869-12150036)
chr3 (112-253)||(31271892-31272034)
chr3 (86-253)||(42460579-42460746)
chr3 (97-267)||(9797605-9797774)
chr3 (91-267)||(23799981-23800159)
chr3 (88-145)||(629101-629160)
chr3 (88-265)||(21533882-21534062)
chr3 (170-267)||(18010939-18011037)
chr3 (161-267)||(44960023-44960129)
chr3 (88-253)||(45568530-45568698)
chr3 (88-209)||(52116140-52116262)
chr3 (162-267)||(10229389-10229493)
chr3 (200-253)||(27856130-27856183)
chr3 (147-245)||(1649317-1649412)
chr3 (170-248)||(19339095-19339174)
chr3 (162-253)||(12947362-12947457)
chr3 (206-248)||(48199738-48199780)
chr3 (98-229)||(50194392-50194526)
chr3 (88-267)||(47042120-47042306)
chr3 (197-253)||(29239285-29239343)
chr3 (141-253)||(35175290-35175404)
chr3 (215-253)||(3606738-3606776)
chr3 (165-267)||(12050719-12050820)
chr3 (162-267)||(36910712-36910817)
chr3 (204-253)||(8914659-8914708)
chr3 (96-148)||(25631679-25631732)
chr3 (204-253)||(27706318-27706367)
chr3 (204-253)||(51487057-51487106)
chr3 (204-253)||(53807945-53807994)
[»] chr1 (39 HSPs)
chr1 (88-249)||(18939160-18939323)
chr1 (80-253)||(15836023-15836199)
chr1 (135-255)||(34479380-34479500)
chr1 (96-253)||(35462122-35462283)
chr1 (97-267)||(1742129-1742302)
chr1 (162-267)||(8211981-8212086)
chr1 (88-253)||(32394837-32395005)
chr1 (88-253)||(7337748-7337917)
chr1 (88-252)||(21947704-21947872)
chr1 (135-253)||(31317639-31317757)
chr1 (97-247)||(15492142-15492297)
chr1 (85-267)||(45415394-45415579)
chr1 (95-255)||(44543119-44543279)
chr1 (98-267)||(940214-940384)
chr1 (99-193)||(45789415-45789510)
chr1 (88-253)||(49626748-49626918)
chr1 (96-267)||(11462519-11462693)
chr1 (162-267)||(14872556-14872661)
chr1 (141-253)||(16161726-16161838)
chr1 (197-267)||(10776532-10776602)
chr1 (102-245)||(23291735-23291881)
chr1 (137-218)||(26535284-26535366)
chr1 (162-267)||(5983753-5983857)
chr1 (88-250)||(50377166-50377332)
chr1 (107-250)||(27580216-27580361)
chr1 (97-244)||(31984028-31984176)
chr1 (141-253)||(35484476-35484588)
chr1 (141-253)||(39888087-39888199)
chr1 (96-253)||(9341572-9341731)
chr1 (140-250)||(47132793-47132904)
chr1 (96-253)||(32679183-32679344)
chr1 (115-243)||(13144907-13145036)
chr1 (204-267)||(21686831-21686894)
chr1 (135-253)||(36775802-36775920)
chr1 (100-267)||(15434946-15435113)
chr1 (206-267)||(7836867-7836928)
chr1 (204-253)||(19060865-19060914)
chr1 (88-208)||(29738766-29738890)
chr1 (141-209)||(37720251-37720318)
[»] chr4 (39 HSPs)
chr4 (97-250)||(12199781-12199934)
chr4 (96-267)||(22611048-22611221)
chr4 (99-255)||(10258979-10259136)
chr4 (96-253)||(26633756-26633915)
chr4 (88-255)||(19853595-19853765)
chr4 (88-267)||(21686313-21686494)
chr4 (88-253)||(13633969-13634139)
chr4 (88-267)||(53810883-53811066)
chr4 (88-253)||(4142840-4143008)
chr4 (93-267)||(54021722-54021898)
chr4 (98-267)||(52060994-52061160)
chr4 (162-267)||(5119272-5119377)
chr4 (135-267)||(37030168-37030299)
chr4 (96-267)||(33920916-33921089)
chr4 (141-255)||(40066138-40066252)
chr4 (149-247)||(47158147-47158245)
chr4 (88-253)||(24099152-24099325)
chr4 (163-267)||(17949395-17949499)
chr4 (163-267)||(17953247-17953351)
chr4 (88-267)||(2520632-2520817)
chr4 (96-267)||(32766378-32766552)
chr4 (89-253)||(22300701-22300870)
chr4 (96-267)||(35348170-35348345)
chr4 (98-220)||(45418392-45418517)
chr4 (162-267)||(29120434-29120539)
chr4 (96-253)||(9178221-9178377)
chr4 (86-193)||(36194566-36194676)
chr4 (95-267)||(43510062-43510235)
chr4 (204-253)||(56156727-56156776)
chr4 (99-245)||(52978691-52978839)
chr4 (204-253)||(38166313-38166362)
chr4 (150-267)||(44596585-44596702)
chr4 (88-263)||(36161569-36161742)
chr4 (99-253)||(53443993-53444142)
chr4 (203-253)||(52204419-52204469)
chr4 (208-253)||(35395758-35395803)
chr4 (141-251)||(9713819-9713931)
chr4 (205-253)||(11300076-11300124)
chr4 (162-253)||(29961009-29961101)
[»] scaffold0603 (1 HSPs)
scaffold0603 (88-253)||(7552-7720)
[»] chr6 (27 HSPs)
chr6 (88-267)||(33053239-33053422)
chr6 (89-253)||(30493371-30493534)
chr6 (100-253)||(34018409-34018565)
chr6 (91-253)||(127516-127675)
chr6 (88-253)||(3913659-3913827)
chr6 (88-267)||(68072-68254)
chr6 (99-267)||(30608585-30608754)
chr6 (101-253)||(23128468-23128623)
chr6 (95-245)||(25092325-25092472)
chr6 (99-253)||(28981027-28981179)
chr6 (88-229)||(12170331-12170476)
chr6 (97-267)||(32059755-32059928)
chr6 (162-267)||(32327288-32327393)
chr6 (96-253)||(30776511-30776670)
chr6 (162-267)||(606118-606223)
chr6 (135-267)||(13546734-13546864)
chr6 (203-253)||(31852273-31852323)
chr6 (187-267)||(29319949-29320030)
chr6 (162-253)||(7515287-7515377)
chr6 (197-255)||(4352050-4352108)
chr6 (164-253)||(7976265-7976355)
chr6 (141-247)||(11321560-11321666)
chr6 (141-253)||(8102612-8102724)
chr6 (204-253)||(14801776-14801825)
chr6 (88-253)||(545861-546028)
chr6 (96-128)||(7976377-7976409)
chr6 (210-258)||(28635172-28635220)
[»] chr8 (25 HSPs)
chr8 (98-267)||(7883310-7883481)
chr8 (88-220)||(5046588-5046722)
chr8 (103-253)||(40619156-40619307)
chr8 (99-255)||(3673295-3673449)
chr8 (150-253)||(27498447-27498550)
chr8 (96-253)||(18890789-18890948)
chr8 (98-253)||(14544986-14545144)
chr8 (96-267)||(17693683-17693856)
chr8 (88-251)||(24099343-24099512)
chr8 (96-253)||(27110548-27110707)
chr8 (141-267)||(20553310-20553441)
chr8 (204-255)||(40211383-40211434)
chr8 (162-263)||(3240291-3240393)
chr8 (198-267)||(10377640-10377709)
chr8 (88-267)||(23230481-23230663)
chr8 (96-143)||(14916332-14916379)
chr8 (96-145)||(1236886-1236936)
chr8 (96-145)||(8981043-8981093)
chr8 (212-253)||(5333391-5333432)
chr8 (96-253)||(20559827-20559987)
chr8 (96-253)||(20571389-20571549)
chr8 (173-250)||(24419265-24419342)
chr8 (206-267)||(37971242-37971303)
chr8 (197-253)||(8826159-8826215)
chr8 (197-253)||(28086896-28086952)
[»] chr2 (43 HSPs)
chr2 (85-267)||(9169330-9169514)
chr2 (96-253)||(43397205-43397364)
chr2 (88-267)||(7448093-7448275)
chr2 (97-267)||(38445022-38445194)
chr2 (141-267)||(4041666-4041792)
chr2 (88-253)||(4778598-4778767)
chr2 (148-253)||(4264381-4264486)
chr2 (162-267)||(4904217-4904322)
chr2 (95-267)||(4098956-4099131)
chr2 (88-253)||(32448707-32448875)
chr2 (97-229)||(18107850-18107980)
chr2 (88-253)||(19062438-19062605)
chr2 (88-267)||(7646317-7646501)
chr2 (89-267)||(11985302-11985483)
chr2 (163-256)||(29173802-29173895)
chr2 (199-255)||(8893200-8893256)
chr2 (141-253)||(29279656-29279768)
chr2 (96-267)||(7677945-7678123)
chr2 (88-253)||(39310938-39311102)
chr2 (150-253)||(6358962-6359066)
chr2 (96-253)||(12648009-12648169)
chr2 (142-229)||(28871871-28871959)
chr2 (141-253)||(31128866-31128977)
chr2 (97-253)||(8809137-8809294)
chr2 (88-267)||(36943193-36943378)
chr2 (162-248)||(12554272-12554358)
chr2 (159-252)||(16375869-16375960)
chr2 (187-253)||(27097492-27097558)
chr2 (88-267)||(18763313-18763496)
chr2 (162-267)||(35220249-35220353)
chr2 (96-184)||(28718104-28718192)
chr2 (95-248)||(37994128-37994285)
chr2 (165-267)||(31210679-31210781)
chr2 (96-185)||(11833338-11833430)
chr2 (197-253)||(1421634-1421690)
chr2 (96-253)||(3308793-3308952)
chr2 (204-263)||(10929626-10929685)
chr2 (135-217)||(13014899-13014980)
chr2 (88-152)||(37876786-37876852)
chr2 (141-253)||(14423224-14423336)
chr2 (162-250)||(36691797-36691885)
chr2 (96-145)||(37416556-37416605)
chr2 (88-193)||(14955368-14955476)
[»] chr5 (29 HSPs)
chr5 (88-267)||(13007063-13007246)
chr5 (88-267)||(38597632-38597814)
chr5 (88-253)||(6216729-6216902)
chr5 (88-267)||(9113796-9113979)
chr5 (141-267)||(11977006-11977134)
chr5 (94-267)||(11073971-11074146)
chr5 (96-267)||(6012209-6012383)
chr5 (112-241)||(15571347-15571477)
chr5 (99-247)||(8096588-8096738)
chr5 (88-253)||(2979398-2979566)
chr5 (88-267)||(38007192-38007375)
chr5 (204-267)||(14082444-14082507)
chr5 (88-253)||(14211068-14211223)
chr5 (88-218)||(41630341-41630470)
chr5 (162-267)||(26825343-26825447)
chr5 (99-220)||(34945268-34945391)
chr5 (162-253)||(25980070-25980161)
chr5 (88-233)||(26878186-26878332)
chr5 (204-253)||(24229869-24229918)
chr5 (88-253)||(39567130-39567298)
chr5 (207-249)||(19983415-19983457)
chr5 (177-249)||(28386865-28386934)
chr5 (96-185)||(7036071-7036163)
chr5 (204-253)||(14726546-14726595)
chr5 (141-253)||(28540998-28541110)
chr5 (97-148)||(11767683-11767735)
chr5 (96-128)||(11867524-11867556)
chr5 (207-255)||(15570887-15570935)
chr5 (85-128)||(35850616-35850660)
[»] scaffold0127 (1 HSPs)
scaffold0127 (96-253)||(15336-15495)
[»] scaffold0026 (1 HSPs)
scaffold0026 (88-253)||(71949-72118)
[»] scaffold0009 (1 HSPs)
scaffold0009 (96-250)||(58167-58324)
[»] scaffold0017 (1 HSPs)
scaffold0017 (85-267)||(32818-33005)
[»] scaffold0445 (1 HSPs)
scaffold0445 (88-253)||(1179-1348)
[»] scaffold0088 (1 HSPs)
scaffold0088 (96-244)||(50630-50781)
[»] scaffold0136 (2 HSPs)
scaffold0136 (162-267)||(10113-10217)
scaffold0136 (141-244)||(37938-38040)
[»] scaffold0634 (1 HSPs)
scaffold0634 (88-253)||(8349-8516)
[»] scaffold0262 (1 HSPs)
scaffold0262 (102-226)||(1931-2056)
[»] scaffold0492 (1 HSPs)
scaffold0492 (80-231)||(12743-12897)
[»] scaffold0049 (1 HSPs)
scaffold0049 (96-185)||(71438-71527)
[»] scaffold0884 (1 HSPs)
scaffold0884 (88-255)||(2056-2226)
[»] scaffold0039 (1 HSPs)
scaffold0039 (96-193)||(92944-93043)


Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26611082 - 26610854
Alignment:
Q  1 ttatttgaattatgagttctatttatagggtttggttgacattcataattgaaaatatattaaataagttttctgtcgttttgatttatcgaggagggtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||||    
T  26611082 ttatttgaattatgagttctatttatagggtttggttgacattcataattgaaaatatattaaataagttttctgtctttttcattcatcgatgagggtg 26610983  T
Q  101 gttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccatttt 200  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  26610982 gttttaggttatttttgacctaaaatcacccttatgcatctttttcccctttctttgaatttaaataagtggtttccacatatatcaagttttccatttt 26610883  T
Q  201 gtgttttttgtgatttcgtcatctgagtg 229  Q
    |||||||||||||||||||| ||||||||    
T  26610882 gtgttttttgtgatttcgtcgtctgagtg 26610854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 34899850 - 34899678
Alignment:
Q  98 gtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    ||||||||||||||||||| |||||| ||||| || | | ||||||||| |||  ||||||| ||  ||||||| |||||| ||||| ||| |||||||     
T  34899850 gtggttttaggtcattttttgacctagaatcacccctctacatctttttttcccttttctttcaatctaaataagtggttttcacatctatcaagttttt 34899751  T
Q  195 cattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  34899750 ccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 34899678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 47590160 - 47590331
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    ||||| ||||||||||||||||| ||| ||||| || | | ||| |||||| |  |||||| ||  ||||||| |||||| ||||||||| ||||||| |    
T  47590160 gggtgattttaggtcatttttgaactagaatcacccctctacatttttttccctattctttcaatctaaataagtggttttcacatatatcaagtttttc 47590259  T
Q  196 attttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     |||||||||||||||||||||||  ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  47590260 cttttgtgttttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 47590331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 267
Target Start/End: Complemental strand, 26624027 - 26623861
Alignment:
Q  101 gttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccatttt 200  Q
    |||||| || ||||||||||   ||| | |||| || ||||||||  ||||||||| || |||||||| | |||| |||| |||| ||||||| ||||||    
T  26624027 gttttaagttatttttgaccaggaataacccttctgtatcttttttccctttctttcaatttaaataagttgtttacacacatatcaagtttttcatttt 26623928  T
Q  201 gtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     |||||||||||||||| || |||||||| ||| ||||||||||||||||||| |||| ||||||||    
T  26623927 atgttttttgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtacggcgtttgat 26623861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 40993019 - 40993188
Alignment:
Q  88 atcgaggagggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc---tttctttgaaattaaataattggtttccacatat 183  Q
    |||||||| ||| |||||||||||||||| ||||||||||||  | | | ||||||||| |||   ||||||| ||  ||||||| |||||| ||||| |    
T  40993019 atcgaggatggtagttttaggtcattttttgacctaaaatcactcctctacatctttttttccacttttctttcaatctaaataagtggttttcacatct 40993118  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    || ||||||| | |||||||||||||||||||||||| ||| |||| ||| |||||||||||||| ||||    
T  40993119 atcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatctt 40993188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 42978445 - 42978630
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc---tttctttgaaattaaataattggtttccacata 182  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| |  | | |||||||||||||   ||||  | ||  ||||||| |||||| ||||||    
T  42978445 atcgaggaggggtggttttaggtcattttttgacctagaatcaccactctacatctttttctccccttttcgatcaatctaaataagtggttttcacata 42978544  T
Q  183 tataaagttttccattttgtgtt-ttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||||||| | ||||||||| ||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  42978545 tataaagtttttccttttgtgttcttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 42978630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 37837703 - 37837529
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||||||||||||| |||||| ||||| || | | |||||||||  ||||| |||| ||  ||||||| |||||| ||||||||| |||||||    
T  37837703 gggtggttttaggtcattttttgacctagaatcacccctctacatcttttttcccttttctttcaatctaaataagtggtttacacatatattaagtttt 37837604  T
Q  194 ccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
       ||||||||||||| |||||||| |||||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  37837603 ttcttttgtgtttttttgtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 37837529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 48317057 - 48316897
Alignment:
Q  96 gggtggttttaggtcatttttg-acctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttt 192  Q
    |||||||||||||||||||||| ||||| ||||| || | | |||||||||| ||  ||||||| || |||||||| |||||| ||||| ||| || |||    
T  48317057 gggtggttttaggtcatttttggacctagaatcacccctctacatctttttcccccttttctttcaatttaaataagtggttttcacatctatcaaattt 48316958  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |   |||||||||||||||||||||||| ||| |||  ||| |||||||||||||||||||    
T  48316957 tttcttttgtgttttttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtctt 48316897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 9450391 - 9450208
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctt-tttctccttt-ctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| || | | |||||| |||| ||||| |||| ||  ||||||| || ||| ||||| |    
T  9450391 atcgaggagggatggttttaggtcattttttgacctagaatcacccatctacatcttgtttccccttttctttcaatctaaataagtgattttcacatct 9450292  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||  |||||  | |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| | || ||||||||    
T  9450291 atctagtttctccttttgtgttttttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 9450208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 30757073 - 30756890
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| ||||||||||| |||||| |||||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| || ||| ||||| |    
T  30757073 atcgaggaggggtggttttaggtaattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatct 30756974  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || | ||||| | |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  30756973 atcatgtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 30756890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 21927921 - 21927823
Alignment:
Q  150 tttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtc 248  Q
    ||||||| || |||||||| ||||||  |||| ||| ||||||| ||||||||||||||||||||||| || |||||||||| | ||||||||||||||    
T  21927921 tttctttcaatttaaataagtggtttttacatgtattaagtttttcattttgtgttttttgtgatttcatcgtctgagtgtgacgttgtgttgttcgtc 21927823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 13797173 - 13797023
Alignment:
Q  99 tggttttaggtcatttttga-cctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagttttcca 196  Q
    |||||||||||||||||| | |||| ||||| || | | |||||||||| ||||| |||| || |||||||| || |||  |||| ||| ||||||| |     
T  13797173 tggttttaggtcattttttaacctagaatcacccctctacatctttttccccttttctttcaatttaaataagtgattttaacatctatcaagtttttcc 13797074  T
Q  197 ttttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgt 247  Q
    ||||||||||||| |||||||||| ||| |||| ||| |||||||||||||    
T  13797073 ttttgtgttttttatgatttcgtcgtctaagtgcggcgttgtgttgttcgt 13797023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 267
Target Start/End: Original strand, 19296800 - 19296890
Alignment:
Q  177 cacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||| ||| ||||||| | |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  19296800 cacatctatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 19296890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 48061338 - 48061442
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||||| ||| |||||||   ||||||||||| |||||||||||| ||| |||| |||||| |||||||||||||||||| || ||    
T  48061338 taaataagtggttttcacatctatcaagttttttcttttgtgtttt-tgtgatttcgtcgtctaagtgcggcattttgttgttcgtcgtcttatgcgacg 48061436  T
Q  262 tttgat 267  Q
    ||||||    
T  48061437 tttgat 48061442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 19404999 - 19404828
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||||||||||||| |||||| ||||| || | | ||||||||| |||||| |||| ||  ||||||| |||||| |||||| || |||||||    
T  19404999 gggtggttttaggtcattttttgacctagaatcacccctctacatctttttttccttttctttcaatctaaataagtggttttcacataaatcaagtttt 19404900  T
Q  194 ccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     | |||||   |||| ||||||||||| ||| |||| ||| || | |||||||||||||| | | |||||||||    
T  19404899 tccttttga--ttttagtgatttcgtcgtctaagtgcggcgttctattgttcgtcgtcttgtgcatcgtttgat 19404828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 24351097 - 24350929
Alignment:
Q  88 atcgaggaggg-tggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctcc-tttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| || |||||||||| ||||||||||| ||||| || | |||||| |||| ||| ||||||| ||  ||||||| || ||| |||||| |    
T  24351097 atcgaggaggggtgattttaggtcaatttttgacctagaatcacccctgtgcatccttttttccctttctttcaatctaaataagtgattttcacataca 24350998  T
Q  185 taaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | ||||||| | ||| ||||||||| ||||||||||| ||| |||| | | |||||||||||||||||||    
T  24350997 tcaagtttttc-tttcgtgttttttagtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctt 24350929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 25255083 - 25255192
Alignment:
Q  95 agggtggttttaggtcatttt-tgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||||||||||||| ||||||| ||||| || | |||||||||||| ||||||||| || |||||||| | |||| |||| |||| |  ||||    
T  25255083 agggtggttttaggtcattttttgacctataatcacccctttgcatctttttcccctttctttcaatttaaataagttgttttcacacatatcacatttt 25255182  T
Q  194 ccattttgtg 203  Q
     |||||||||    
T  25255183 acattttgtg 25255192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 28476114 - 28476226
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtg 239  Q
    |||||||||||||||| ||  ||||||| || ||| |||||| || ||||||| | ||||||||||||| ||||||||||| ||| |||| | | |||||    
T  28476114 tttttctcctttctttcaatctaaataagtgattttcacatacatcaagtttttc-ttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtg 28476212  T
Q  240 ttgttcgtcgtctt 253  Q
    ||||||||||||||    
T  28476213 ttgttcgtcgtctt 28476226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 25287362 - 25287271
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| || ||| ||| ||||| ||||||| | |||| ||||||||||||||| ||  ||| |||||||| |||||||||||||||||||    
T  25287362 taaataagtgattttcacgtatattaagtttttctttttatgttttttgtgattttgttgtctaagtgtggcgttgtgttgttcgtcgtctt 25287271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 39228930 - 39229021
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| |||||| |||| |||| |||  || |||||||||||||||||||||||||  |||||||| |   |||||||||||||||||||    
T  39228930 taaataagtggttttcacacatatcaagactttcattttgtgttttttgtgatttcgttgtctgagtgcgttgttgtgttgttcgtcgtctt 39229021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 39171846 - 39171675
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc---tttctttgaaattaaataattggtttccacata 182  Q
    ||||||||||| ||||| |||||||||||| |||||| ||||| || | | ||||||||| | |   |||||||  |  ||||||| |||||| || ||     
T  39171846 atcgaggaggggtggttgtaggtcattttttgacctagaatcacccctctacatcttttttttcctttttctttcgatctaaataagtggttttcatatc 39171747  T
Q  183 tataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||| ||||||| | ||||||||||||| ||||||||||||||| ||||  || || ||||||||||||||||    
T  39171746 tatcaagtttttccttttgtgtttttttgtgatttcgtcatctaagtgctgcgttttgttgttcgtcgtctt 39171675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 41553677 - 41553522
Alignment:
Q  99 tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    |||||||||||||||||| || ||| ||||| | || ||||| |||| ||| ||||||| ||  |||||||  | ||||||||||||| |||| ||   |    
T  41553677 tggttttaggtcattttttgatctagaatcaccattttgcatatttt-ctcatttctttcaatctaaataagggatttccacatatatcaagtgttttct 41553579  T
Q  198 tttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||| |||||||||||  |||||||   | |||||||||||||||||||    
T  41553578 tttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtctt 41553522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 41554022 - 41553867
Alignment:
Q  99 tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    |||||||||||||||||| || ||| ||||| | || ||||| |||| ||| ||||||| ||  |||||||  | ||||||||||||| |||| ||   |    
T  41554022 tggttttaggtcattttttgatctagaatcaccattttgcatatttt-ctcatttctttcaatctaaataagggatttccacatatatcaagtgttttct 41553924  T
Q  198 tttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||| |||||||||||  |||||||   | |||||||||||||||||||    
T  41553923 tttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtctt 41553867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 41554367 - 41554212
Alignment:
Q  99 tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    |||||||||||||||||| || ||| ||||| | || ||||| |||| ||| ||||||| ||  |||||||  | ||||||||||||| |||| ||   |    
T  41554367 tggttttaggtcattttttgatctagaatcaccattttgcatatttt-ctcatttctttcaatctaaataagggatttccacatatatcaagtgttttct 41554269  T
Q  198 tttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||| |||||||||||  |||||||   | |||||||||||||||||||    
T  41554268 tttgtgttttttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtctt 41554212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 249
Target Start/End: Original strand, 25067934 - 25068084
Alignment:
Q  98 gtggttttaggtcat-ttttgacctaaaatcatccttatgcatc-tttttctcctttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    ||||||||| ||||| |||||||||  ||||| || | |||||| |||||||  ||||||| ||  ||||||| || ||||||||||||  |||| || |    
T  25067934 gtggttttatgtcatcttttgaccttgaatcacccatttgcatcctttttcta-tttctttcaatctaaataagtgatttccacatata--aagtctttc 25068030  T
Q  196 attttgtg-ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcg 249  Q
     ||||||| |||||||||||||| ||||||||||| ||| |||||||||||||||    
T  25068031 -ttttgtgcttttttgtgatttcatcatctgagtgcggcgttgtgttgttcgtcg 25068084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 38051311 - 38051152
Alignment:
Q  96 gggtggttttaggtcat-ttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    ||||||||||||||||| |||| ||||| ||||| || | | |||| ||||| ||||||||| ||  ||||||  ||||||| | |||||| |||||||     
T  38051311 gggtggttttaggtcatattttaacctagaatcacccatctacatcattttcccctttcttttaatctaaatatgtggtttcaatatatatcaagttttt 38051212  T
Q  195 cattttgtgttttttg-tgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
      ||||||||| |||  |||||||||||| ||| || |   |||||||||||||||||||    
T  38051211 ttttttgtgttatttcatgatttcgtcatttgaatgcgatgttgtgttgttcgtcgtctt 38051152  T

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Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 250
Target Start/End: Complemental strand, 45350044 - 45349887
Alignment:
Q  99 tggttttaggtcat-ttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    |||||||||||||| |||||||||| ||||| || | | | ||||||| |||  ||||||| || |||||||| |||||| ||| ||||  | |||||      
T  45350044 tggttttaggtcattttttgacctagaatcacccatctacttcttttt-tcctttttctttcaatttaaataagtggttttcacgtataccaggtttttt 45349946  T
Q  196 attttgtgttttt----tgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgt 250  Q
     ||||||||||||    |||||||||||| ||| |||||||| ||||||||||||||||    
T  45349945 cttttgtgttttttttctgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgt 45349887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 24770205 - 24770266
Alignment:
Q  206 ttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||||||||||| ||| |||| ||  ||||||||||||||||||||| || ||||||||    
T  24770205 ttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgacgtttgat 24770266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 27997045 - 27997094
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||| |||||||| |||||||| |||||||||||||||||| ||||    
T  27997045 ttttttgttatttcgtcgtctgagtgcggcattgtgttgttcgtcatctt 27997094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 229
Target Start/End: Complemental strand, 5078639 - 5078504
Alignment:
Q  95 agggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    |||||| ||||||||||||||| |||||| ||||| || | ||||||||| ||||| || |||  |  ||||||| || |||  |||||||| |||||||    
T  5078639 agggtgattttaggtcattttttgacctagaatcacccctctgcatctttctctccattatttcgatctaaataagtgatttttacatatatcaagtttt 5078540  T
Q  194 ccattttgtgtttttt-gtgatttcgtcatctgagtg 229  Q
     | ||||||||||||| || |||||||||||| ||||    
T  5078539 tc-ttttgtgttttttcgtaatttcgtcatctaagtg 5078504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 253
Target Start/End: Original strand, 11653726 - 11653885
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaat-taaataattggtttccacatatataaagtttt 193  Q
    |||||| ||||||| |||||| |||||| |||||||| | ||||| ||||| |  ||| ||| |||| ||||||| || ||| |||||||| ||  ||||    
T  11653726 gggtggctttaggttattttttgacctagaatcatccatctgcattttttttttatttttttaaaatctaaataagtgattttcacatata-aagttttt 11653824  T
Q  194 ccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
       ||||||| ||||| ||||||||||| ||||||| || | |||||||||||||||||||    
T  11653825 attttttgtgctttttcgtgatttcgtcgtctgagtatgacgttgtgttgttcgtcgtctt 11653885  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 6001999 - 6002042
Alignment:
Q  210 gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||||||||||||||||||||  | ||||||||||||||||    
T  6001999 gtgatttcgtcatctgagtgtggcggtttgttgttcgtcgtctt 6002042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 12141483 - 12141393
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| |||||| ||||| ||| |||||||   |||||||||||| ||||||||||| ||| |||| ||| || ||||||| ||||||||    
T  12141483 taaataagtggttttcacatctatcaagttttttcttttgtgttttt-gtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtctt 12141393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 39328924 - 39328861
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||||||||||||| ||| |||  ||| ||||||||||||||||||| | || ||||||||    
T  39328924 ttttttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 39328861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 1769307 - 1769265
Alignment:
Q  211 tgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||||| |||| || ||||||||||||||||||||    
T  1769307 tgatttcgtcatcttagtgcggtattgtgttgttcgtcgtctt 1769265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 22087199 - 22087273
Alignment:
Q  135 tgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt 209  Q
    |||||||||||| ||||||||| || |||||||| |||| | |||| |||| || || | |||||||||||||||    
T  22087199 tgcatctttttcccctttctttcaatttaaataagtggtgttcacacatatcaaattctacattttgtgtttttt 22087273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 3394320 - 3394477
Alignment:
Q  97 ggtggttttaggtcatttttg-acctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    |||||||||| |||||||||| || || ||||| |  | || ||||||||| |||||||||  |  ||||||| || ||| ||| ||||| |||||||      
T  3394320 ggtggttttacgtcatttttggacatataatcacctatttgtatctttttcccctttctttcgatctaaataagtgattttcacgtatatgaagtttttt 3394419  T
Q  196 attttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     || ||| || || |||||||| || |||||||| ||  |||||||||||||||||||    
T  3394420 cttgtgttttcttcgtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtctt 3394477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 8001678 - 8001617
Alignment:
Q  206 ttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||||||||||| ||| |||| ||| || |||||||||||||||| | || ||||||||    
T  8001678 ttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgat 8001617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 11343748 - 11343801
Alignment:
Q  197 ttttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcg 249  Q
    ||||||||||||| ||||||||||  |||||||| ||| |||||||||||||||    
T  11343748 ttttgtgttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtcg 11343801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 22742775 - 22742943
Alignment:
Q  88 atcgaggaggg-tggttttaggtca-tttttgacctaaaatcatccttatgcatcttttt-ctcctttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| || |||||||||| ||||| | ||| ||||| || | ||||||||||| | ||||||||| ||  ||||||| || ||| |||||| |    
T  22742775 atcgaggaggggtgattttaggtcaatttttaatctagaatcacccctctgcatcttttttcccctttctttcaatctaaataagtgattttcacataca 22742874  T
Q  185 taaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | ||||||| | ||| || |||||| ||||||||||| ||| |||  | | |||||||||||||||||||    
T  22742875 tcaagtttttc-tttcgttttttttcgtgatttcgtcgtcttagttcgacgttgtgttgttcgtcgtctt 22742943  T

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Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 21431460 - 21431628
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| |||||||||||||||||||||||||||||| || | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||||| ||    
T  21431460 atcgaggaggggtggttttaggtcatttttgacctaaaatcacccctctacatcttttttcccattttctttcaatctaaataagtggttttcacatcta 21431559  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | ||||||| | |||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||    
T  21431560 tcaagtttttctttttgtgttttttgtgatttcgccgtctaagtgcggcattgtgttgttcgtcgtctt 21431628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 20465212 - 20465041
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    ||||||||||| |||||||||||| || ||||| || | | | |||||||| ||||| ||| ||  ||||||| || |||  |||||||| ||||||| |    
T  20465212 gggtggttttatgtcatttttgacatagaatcacccctctccctctttttcccctttttttcaatataaataagtgattttaacatatatcaagtttttc 20465113  T
Q  196 attttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     ||||||||||||||||||||| || ||| |||| ||  ||||||||||||||||||| |||| ||||||||    
T  20465112 cttttgtgttttttgtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtcttgtacggcgtttgat 20465041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 43488834 - 43488661
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctccttt--ctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    |||||| |||||||| ||||||||||| ||||| || | | |||||||||  |||||  |||| ||  ||||||| |||||| ||||| ||| |||||||    
T  43488834 gggtgggtttaggtcttttttgacctagaatcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacatctatcaagtttt 43488735  T
Q  194 ccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
        ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| | || ||||||||    
T  43488734 ttcatttgtgttttttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 43488661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 35865178 - 35865017
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||||||||||||||| |||||||||||||| | |||||||||  ||| ||||||| ||  ||||||| | |||| ||||||||| |||||||    
T  35865178 gggtggttttaggtcatttttgatctaaaatcatccttctacatcttttttcctcttttctttcaatctaaataagtagttttcacatatatcaagtttt 35865079  T
Q  194 ccattttgtgttt---tttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     | ||||||||||   |||||||||||||| ||| | || ||| |||||||||| ||||||||    
T  35865078 tc-ttttgtgttttaatttgtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtctt 35865017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 40556546 - 40556729
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| || |   ||||||||| |||  |||||||  |  ||||||| |||||| || || |    
T  40556546 atcgaggaggggtggttttaggtcattttttgacctagaatcacccctccacatctttttttcccttttcttttgatataaataagtggttttcatatct 40556645  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || ||||||||| ||||||||||| |||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  40556646 atcaagttttcccttttgtgttttatgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 40556729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 6954941 - 6954767
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttt 192  Q
    ||||| ||||||||||||||| |||||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| ||| || ||||| ||| ||||||    
T  6954941 gggtgattttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgggtttcacatctatcaagttt 6954842  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | |||||||||||||||||||||||||| ||| |||| ||| |||| |||||||||||||| | || ||||||||    
T  6954841 ttcattttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtattgttcgtcgtcttgtgcggcgtttgat 6954767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 9998301 - 9998484
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt--gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacata 182  Q
    ||||||||||| ||||||||||||||||||  |||||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||| |     
T  9998301 atcgaggaggggtggttttaggtcatttttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtc 9998400  T
Q  183 tataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||| ||||||| ||||||||||||| |||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  9998401 tatcaagtttttcattttgtgtttt-tgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 9998484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 97 - 258
Target Start/End: Original strand, 53508067 - 53508230
Alignment:
Q  97 ggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctccttt--ctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    |||||| ||||||||||||||||||||||||| || | ||| ||||||| ||||||  |||| ||  ||||||| || ||| ||||||||| |||||||     
T  53508067 ggtggtcttaggtcatttttgacctaaaatcacccatctgcgtcttttt-tcctttttctttcaatataaataagtgattttcacatatatcaagttttt 53508165  T
Q  195 cattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacg 258  Q
      || |||||||||| ||||||||||| ||||| || ||| ||||||||||||||||||| ||||    
T  53508166 tcttctgtgttttttcgtgatttcgtcgtctgaatgcggcgttgtgttgttcgtcgtcttgtacg 53508230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 40487160 - 40487328
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| || ||||||||||||||| |||||| |||||  ||| | |||||||||| ||||| |||| ||  ||||||| |||||| ||| | |     
T  40487160 atcgaggaggggtgattttaggtcattttttgacctagaatcactcttctacatctttttccccttttctttcaatctaaataagtggttttcacttctt 40487259  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | ||||||| | |||||| ||||||||||||||||| ||| |||| ||| |||||||||||||||||||    
T  40487260 tcaagtttttctttttgtattttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtctt 40487328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 48650989 - 48650819
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc---tttctttgaaattaaataattggtttccacata 182  Q
    ||||||||||| |||||||||||||||||| |||||||||||| || |   ||||||||| |||   ||||||| ||  |  |||| |||||| |||||     
T  48650989 atcgaggaggggtggttttaggtcattttttgacctaaaatcacccctcgacatctttttttccccttttctttcaatctgtataagtggttttcacatc 48650890  T
Q  183 tataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||| ||||||| | |||||||||||||||||||| ||| ||| |||| ||||||||||||||||| |||||    
T  48650889 tatcaagtttttccttttgtgttttttgtgattttgtcgtctaagtgcggcattgtgttgttcgttgtctt 48650819  T

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Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 252
Target Start/End: Original strand, 54148823 - 54148993
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| || | | |||||||||  ||| ||||||| ||  ||||||| |||||| ||||| |    
T  54148823 atcgaggaggggtggttttaggtcattttttgacctacaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatct 54148922  T
Q  184 ataaagttttccattttgtgtttt--ttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtct 252  Q
    || |||||||   |||||| ||||  ||||||||||||| ||| |||| ||||||||||||||||||||||    
T  54148923 atcaagttttttcttttgtattttttttgtgatttcgtcgtctaagtgcggcattgtgttgttcgtcgtct 54148993  T

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Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 10108073 - 10108253
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| ||||||||||||||||| |||||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||| | ||    
T  10108073 atcgaggaggggtggttttaggtcatttt-gacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtcta 10108171  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | ||||||| | ||||||||||| |||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  10108172 tcaagtttttccttttgtgtttt-tgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 10108253  T

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Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 10232914 - 10233087
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttt 192  Q
    ||||||||||||||||||||| |||||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||| | ||| ||||||    
T  10232914 gggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagttt 10233013  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | | ||||||||||| |||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  10233014 ttccttttgtgtttt-tgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 10233087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 47895986 - 47896169
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt-ctccttt-ctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| ||||| ||| |||||||| |||||| ||||| || | | ||||||||| ||| ||| |||| ||  ||||||| |||||| |||||||    
T  47895986 atcgaggaggggtggttatagatcattttttgacctagaatcacccctctacatcttttttctctttttctttcaatctaaataagtggttttcacatat 47896085  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || |||||||   |||||||||||||||||||||||| ||  |||||||| ||||||||||||| ||||| | || ||||||||    
T  47896086 atcaagttttttcttttgtgttttttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgttgtcttgtgcggcgtttgat 47896169  T

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Target: chr3; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 101 - 267
Target Start/End: Complemental strand, 52923355 - 52923188
Alignment:
Q  101 gttttaggtcatttttgacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagttttccattt 199  Q
    |||||| ||||||||||||||| ||||| || | | |||||||||  ||||| |||| ||  ||||||| |||||| ||||| ||| ||||||| | |||    
T  52923355 gttttaagtcatttttgacctagaatcacccctctacatcttttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttt 52923256  T
Q  200 tgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||| ||||| ||||| ||| ||| ||||||||  |||||||||||||||||| | || ||||||||    
T  52923255 tgtgtcttttgggattttgtcgtctaagtgtggcgctgtgttgttcgtcgtcttgtgcggcgtttgat 52923188  T

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Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 36461674 - 36461502
Alignment:
Q  98 gtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    ||||||||||||||||||| |||||| | ||| || | | |||||||||  ||  ||||||| ||  ||||||| || ||| ||||| ||| |||||||     
T  36461674 gtggttttaggtcattttttgacctatattcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcaagttttt 36461575  T
Q  195 cattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
      |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  36461574 tcttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 36461502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 250
Target Start/End: Complemental strand, 7449144 - 7448990
Alignment:
Q  99 tggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    |||||||||||||||||| ||| || |||| ||| | | |||||||||  ||| ||||||| ||  ||||||| |||||| | ||| ||| |||||||||    
T  7449144 tggttttaggtcattttttgacatagaatcgtccctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcatctatcaagttttcc 7449045  T
Q  196 attttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgt 250  Q
     ||||| |||||||||||||| ||| ||| ||||  |||||||||||||||||||    
T  7449044 cttttgagttttttgtgattttgtcgtctaagtgctgcattgtgttgttcgtcgt 7448990  T

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Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 250
Target Start/End: Complemental strand, 7457286 - 7457132
Alignment:
Q  99 tggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    |||||||||||||||||| ||| || |||| ||| | | |||||||||  ||| ||||||| ||  ||||||| |||||| | ||| ||| |||||||||    
T  7457286 tggttttaggtcattttttgacatagaatcgtccctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcatctatcaagttttcc 7457187  T
Q  196 attttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgt 250  Q
     ||||| |||||||||||||| ||| ||| ||||  |||||||||||||||||||    
T  7457186 cttttgagttttttgtgattttgtcgtctaagtgctgcattgtgttgttcgtcgt 7457132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 9319970 - 9320074
Alignment:
Q  163 aaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgt 262  Q
    |||||| |||||| ||||| ||| ||||||| | ||||||||||||| |||||||||  ||| | || ||||||||||||||||||||||| | || |||    
T  9319970 aaataagtggttttcacatctatcaagtttttccttttgtgttttttatgatttcgttgtctaaatgcggcattgtgttgttcgtcgtcttgtgcgacgt 9320069  T
Q  263 ttgat 267  Q
    |||||    
T  9320070 ttgat 9320074  T

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Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 29921944 - 29922048
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtg 239  Q
    |||||| ||||||||| ||  ||||||| || ||||||||||||| |||| ||   ||||||||||||| ||||||||||| |||||||||||| |||||    
T  29921944 tttttcccctttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgtggcgttgtg 29922043  T
Q  240 ttgtt 244  Q
    |||||    
T  29922044 ttgtt 29922048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 29971097 - 29971201
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtg 239  Q
    |||||| ||||||||| ||  ||||||| || ||||||||||||| |||| ||   ||||||||||||| ||||||||||| |||||||||||| |||||    
T  29971097 tttttcccctttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgagtgtggcgttgtg 29971196  T
Q  240 ttgtt 244  Q
    |||||    
T  29971197 ttgtt 29971201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 12150036 - 12149869
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||||| |||||||| || |||||| |||||| ||||| || | | || |||||| || ||||||| ||  ||||||| ||||||  ||||||||    
T  12150036 atcgaggaggggtggttttaagttattttttgacctataatcacccctctacacctttttttcttttcttttaagctaaataagtggtttttacatatat 12149937  T
Q  186 aaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
      ||||||   ||||||| |||||||||||||||||||| |||| ||| |||| |||||| |||||||    
T  12149936 ccagtttttgcttttgtgatttttgtgatttcgtcatctaagtgcggcgttgtattgttcatcgtctt 12149869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 253
Target Start/End: Complemental strand, 31272034 - 31271892
Alignment:
Q  112 tttttgacctaaaatcatccttatgcatctttt-tctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttg 210  Q
    ||||| ||||| |||||||| | | |||||||| || ||||||| | ||  ||||||| |||||| ||||| ||| |||||||   ||||||||||||||    
T  31272034 tttttaacctagaatcatccctttacatcttttgtcccctttctatcaatctaaataaatggttttcacatttatcaagttttttcttttgtgttttttg 31271935  T
Q  211 tgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| || ||| |||| ||  |||||||||||||||||||    
T  31271934 tgatttcttcgtctaagtgcggttttgtgttgttcgtcgtctt 31271892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 253
Target Start/End: Original strand, 42460579 - 42460746
Alignment:
Q  86 ttatcgaggaggg-tggttttaggtca-tttttgacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacat 181  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||  | |||||||||||  | | ||||||| ||  ||||||| || |||||||||    
T  42460579 ttatcgaggagggatgattttaggtcagtttttgacctaaaatcatcaatctgcatcttttttccccttttctttcaatctaaataagtgatttccacat 42460678  T
Q  182 atataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | || ||||||| | ||| |||||||| ||||||||||| ||| |||   || ||||||||||| |||||||    
T  42460679 acatcaagtttttc-tttcgtgtttttcgtgatttcgtcgtcttagt---gcgttgtgttgttcatcgtctt 42460746  T

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Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 267
Target Start/End: Complemental strand, 9797774 - 9797605
Alignment:
Q  97 ggtggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt---ctcctttctttgaaattaaataattggtttccacatatataaagttt 192  Q
    |||||||||||||||||||| |||||| ||||| || | | |||||||||   ||| ||||||| ||  ||||||| |||||| ||||| ||| ||||||    
T  9797774 ggtggttttaggtcattttttgacctagaatcacccctctacatcttttttttctcttttctttcaatctaaataagtggttttcacatctatcaagttt 9797675  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
        |||||||||||||||||||||||| ||| |||| |||     ||||||||||||||| | || ||||||||    
T  9797674 ctacttttgtgttttttgtgatttcgtcgtctaagtgcggc-----gttgttcgtcgtcttgtgcggcgtttgat 9797605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 267
Target Start/End: Complemental strand, 23800159 - 23799981
Alignment:
Q  91 gaggagggtggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatatataa 187  Q
    |||| |||||||||||||| |||||| |||||||||| |  ||| | |||||||||  ||| ||||||| ||  ||||||| ||||||  |||||||| |    
T  23800159 gaggggggtggttttaggttattttttgacctaaaattactcttctacatcttttttcctcttttctttcaatctaaataagtggtttttacatatatca 23800060  T
Q  188 agttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||| || |||| ||||||| ||||||||||| ||| | || ||| ||||||| || |||||||| | || ||||||||    
T  23800059 agtttgcccttttttgttttt-gtgatttcgtcgtctaattgcggcgttgtgttcttagtcgtcttgtgcggcgtttgat 23799981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 629160 - 629101
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatt-tttgacctaaaatcatccttatgcatcttttt 145  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||    
T  629160 atcgaggaggggtggttttaggtcattctttgacctaaaatcatccttctgcatcttttt 629101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 265
Target Start/End: Complemental strand, 21534062 - 21533882
Alignment:
Q  88 atcgagga-gggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcct---ttctttgaaattaaataattggtttccacatat 183  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| || | | ||||||||| ||||   |||||  ||  ||||||| |||||| ||||| |    
T  21534062 atcgaggatgggtggttttaggtc-tttttgacctagaatcacccctctacatctttttttcctcttttcttccaatctaaataagtggttttcacatct 21533964  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttg 265  Q
    || |||||||   || | | ||||||||||||||||  |||  ||| ||| ||||||||||||||||||| |||| ||||||    
T  21533963 atcaagttttttcttgtattttttttgtgatttcgttgtctatgtgcggcgttgtgttgttcgtcgtcttgtacggcgtttg 21533882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 18010939 - 18011037
Alignment:
Q  170 tggtttccacatatat-aaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    |||||| ||||||||| |||||||| | ||||||||||||||||||| ||| |||| |||||| | ||||||||||| || |||| | || ||||||||    
T  18010939 tggttttcacatatatcaaagtttttccttttgtgttttttgtgattccgttatctaagtgtgacgttgtgttgttcatcatcttgtgcggcgtttgat 18011037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 267
Target Start/End: Complemental strand, 44960129 - 44960023
Alignment:
Q  161 ttaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtc 260  Q
    |||||||| |||||| ||||| ||| ||||||| | |||| ||||||||||||||||||| ||| |||| ||  |||| || ||||||||||| | || |    
T  44960129 ttaaataagtggttttcacatctattaagtttttccttttatgttttttgtgatttcgtcgtctaagtgcggtgttgtattattcgtcgtcttgtgcggc 44960030  T
Q  261 gtttgat 267  Q
    |||||||    
T  44960029 gtttgat 44960023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 45568698 - 45568530
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| || ||| ||| |||| | | |||||||||  ||  ||||||| ||  ||||||| | |||| ||||| |    
T  45568698 atcgaggaggggtggttttaggtcattttttgatctagaataatccatctacatcttttttccccttttctttcaatctaaataagttgttttcacatct 45568599  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    || |||||||   |||| ||||||| ||||||||||| ||| |||| ||| |||||||||||||||||||    
T  45568598 atcaagttttttcttttctgttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtctt 45568530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 209
Target Start/End: Complemental strand, 52116262 - 52116140
Alignment:
Q  88 atcgaggagggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttct-cctttctttgaaattaaataattggtttccacatatata 186  Q
    |||||||| ||||||| |||||| ||||| ||||| |||||| | | ||||||||||| | ||||| ||| || |||||||| || ||| |||||||||     
T  52116262 atcgaggatggtggttgtaggtcttttttaacctagaatcattcatctgcatctttttttccctttgttttaatttaaataagtgattttcacatatatc 52116163  T
Q  187 aagttttccattttgtgtttttt 209  Q
    |||||||   |||||||||||||    
T  52116162 aagttttttcttttgtgtttttt 52116140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 10229389 - 10229493
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||| | ||| ||||||| | ||||||||||| |||||||||||| ||| |||| ||| |||||||||||||| |||| | || ||    
T  10229389 taaataagtggttttcacgtctatcaagtttttccttttgtgtttt-tgtgatttcgtcttctaagtgcggcgttgtgttgttcgtcatcttgtgcggcg 10229487  T
Q  262 tttgat 267  Q
    ||||||    
T  10229488 tttgat 10229493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 27856130 - 27856183
Alignment:
Q  200 tgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||| |||||    
T  27856130 tgtgttttttgtgatttcgtcgtctgagtgcgacattgtgttgttcgttgtctt 27856183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 245
Target Start/End: Original strand, 1649317 - 1649412
Alignment:
Q  147 tcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttc 245  Q
    |||||||||| ||  ||||||| |||||| ||||||||| ||| ||| |   |||| ||||||||||||||||| |||||||||||| |||| ||||||    
T  1649317 tcctttctttcaatctaaataagtggttttcacatatatcaagattttc---ttgttttttttgtgatttcgtcgtctgagtgtggcgttgtattgttc 1649412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 19339095 - 19339174
Alignment:
Q  170 tggtttccacatatat-aaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtc 248  Q
    |||||| ||||||||| |||||||| | ||||||||||| |||||||| ||| ||| |||||| | ||||||||||||||    
T  19339095 tggttttcacatatatcaaagtttttccttttgtgttttatgtgattttgtcgtctaagtgtgacgttgtgttgttcgtc 19339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 12947457 - 12947362
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgtttttt----gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| || ||||||||||||| |||| ||   |||||||||||||    ||||||||||| | |||||| ||| |||||||||||||||||||    
T  12947457 taaataagtgatttccacatatatcaagtgttttcttttgtgtttttttttcgtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgtctt 12947362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 48199738 - 48199780
Alignment:
Q  206 ttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtc 248  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  48199738 ttttgtgatttcgtcgtctgagtgtggcgttgtgttgttcgtc 48199780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 50194526 - 50194392
Alignment:
Q  98 gtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctt-tctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    |||||||||| |||||||| |||||||||||| |  | |||||| ||||  |||| ||||| ||  ||||||| || ||||||||||||| |||| ||      
T  50194526 gtggttttagatcattttttgacctaaaatcacctctctgcatcctttttcccttctctttcaatctaaataagtgatttccacatatatcaagtgtttt 50194427  T
Q  196 attttgtgtttttt-gtgatttcgtcatctgagtg 229  Q
     ||||||||||||| ||||||||||| ||||||||    
T  50194426 cttttgtgttttttcgtgatttcgtcgtctgagtg 50194392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 47042306 - 47042120
Alignment:
Q  88 atcgaggaggg-tggttttaggtcat-ttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||| |||| ||||| ||||| || | | ||||||||| |||  ||||||| || |||||||| || ||| |||||||    
T  47042306 atcgaggaggggtggttttaggtcattttttaacctataatcacccctctacatctttttttcccttttctttcaatttaaataagtgattttcacatat 47042207  T
Q  184 ataaagttttccatttt---gtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || | |||||   ||||    | ||||||||||||||||| ||| |||  | | ||||||||||||||||||| | || ||||||||    
T  47042206 atcatgttttttcttttttctttttttttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtttgat 47042120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 29239285 - 29239343
Alignment:
Q  197 ttttgtgtttttt--gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||||  |||||||| || |||||||| ||| |||||||||||||||||||    
T  29239285 ttttgtgtttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtctt 29239343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 35175290 - 35175404
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt--gtgatttcgtcatctgagtgtggcattgt 238  Q
    ||||||||||||| || ||  |||| || || ||||||||||||| |||| ||   |||||||||||||  || |||||||| |||||||  | ||||||    
T  35175290 tttttctcctttcattcaatctaaacaagtgatttccacatatatcaagtgttttcttttgtgtttttttcgtaatttcgtcgtctgagtacgacattgt 35175389  T
Q  239 gttgttcgtcgtctt 253  Q
    ||||||| |||||||    
T  35175390 gttgttcatcgtctt 35175404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 3606738 - 3606776
Alignment:
Q  215 ttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  3606738 ttcgtcgtctgagtgcggcattgtgttgttcgtcgtctt 3606776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 12050820 - 12050719
Alignment:
Q  165 ataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgttt 264  Q
    |||| |||||| ||||| ||| |||||||   |||||||||||| ||||||||||| ||| || | ||| || |||||||||||||||| | || |||||    
T  12050820 ataagtggttttcacatctatcaagttttatcttttgtgttttt-gtgatttcgtcgtctaagcgcggcgttttgttgttcgtcgtcttgtgcggcgttt 12050722  T
Q  265 gat 267  Q
    |||    
T  12050721 gat 12050719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 36910817 - 36910712
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtc 260  Q
    ||||||| |||||| ||||| ||| ||||||| | || |||||||||| ||||||||| | ||| |||| ||| || |||||||||||||||| | || |    
T  36910817 taaataagtggttttcacatctatcaagtttttccttctgtgtttttttgtgatttcgcc-tctaagtgcggcgttttgttgttcgtcgtcttgtgcggc 36910719  T
Q  261 gtttgat 267  Q
    |||||||    
T  36910718 gtttgat 36910712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 8914659 - 8914708
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||| ||||||||||| ||| |||| | |||||||||||||||||||||    
T  8914659 tttttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtctt 8914708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 25631732 - 25631679
Alignment:
Q  96 gggtggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctc 148  Q
    |||||||||| ||||| |||||||||||||||||||| | | ||||||||||||    
T  25631732 gggtggttttgggtcaatttttgacctaaaatcatccctctccatctttttctc 25631679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 27706367 - 27706318
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||| ||||||||||| ||| |||||| | |||||||||||||||||||    
T  27706367 tttttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtctt 27706318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 51487057 - 51487106
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||| ||||||||||||||| |||| | | |||||||||||||||||||    
T  51487057 tttttcgtgatttcgtcatcttagtgggacgttgtgttgttcgtcgtctt 51487106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 53807994 - 53807945
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||||||||||||| ||| |||| | | |||||||||||||||||||    
T  53807994 ttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtctt 53807945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 8e-33; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 18939160 - 18939323
Alignment:
Q  88 atcgaggag-ggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||| |||||||||||||||||||| || ||| ||||| |  | |||||||||||| ||||||||| || |||||||| | |||| |||| ||||    
T  18939160 atcgaggagaggtggttttaggtcattttttgatctagaatcacctctctgcatctttttcccctttctttcaatttaaataagtagttttcacacatat 18939259  T
Q  186 aaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcg 249  Q
     ||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||    
T  18939260 caagtttttcattttgtgttttttgtgatttcgtcgtctgagtgaggcgttgtgttcttcgtcg 18939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 253
Target Start/End: Original strand, 15836023 - 15836199
Alignment:
Q  80 tttgatttatcgaggag-ggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttc 176  Q
    ||||||| ||| ||||| |||||||||||||||||||| |||||| ||||| |  ||| ||| |||||||||||| || | || |||||||| ||||||     
T  15836023 tttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttctatcaatttaaataagtggtttt 15836122  T
Q  177 cacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||| || |||| || | |||||||||||| ||||||| ||| ||| |||||| |||||||||||||||||||||    
T  15836123 cacatacatcaagtgtttcgttttgtgtttttcgtgattttgtcgtctaagtgtgacattgtgttgttcgtcgtctt 15836199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 255
Target Start/End: Original strand, 34479380 - 34479500
Alignment:
Q  135 tgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggca 234  Q
    |||||||||||  ||||||||| || |||||||| |||||| |||| |||| |||||||  |||||||||||||||||||||| || ||||||| ||||     
T  34479380 tgcatcttttttccctttcttttaatttaaataagtggttttcacacatatcaagttttttattttgtgttttttgtgatttcctcgtctgagtatggcg 34479479  T
Q  235 ttgtgttgttcgtcgtcttat 255  Q
    |||| ||||||||||||||||    
T  34479480 ttgtattgttcgtcgtcttat 34479500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 35462283 - 35462122
Alignment:
Q  96 gggtggttttaggtcatttttg--acctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagtt 191  Q
    |||||||||||||||||||||   || || |||||||| | | |||||||||  ||  ||||||| || |||||||| |||||| ||||| ||| |||||    
T  35462283 gggtggttttaggtcattttttttacatagaatcatccctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatcaagtt 35462184  T
Q  192 ttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    || | |||||||||||||||||||||||| | | |||| ||| |||||||||||||||||||    
T  35462183 tttccttttgtgttttttgtgatttcgtcgtgtaagtgcggcgttgtgttgttcgtcgtctt 35462122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 97 - 267
Target Start/End: Original strand, 1742129 - 1742302
Alignment:
Q  97 ggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    |||||||||||||||||||| |||||| ||||| || | | |||||||| | ||||| |||| ||  ||||||| |||||| ||||||||| |||||||     
T  1742129 ggtggttttaggtcattttttgacctagaatcacccctctccatcttttcccccttttctttcaatctaaataagtggttttcacatatatcaagttttt 1742228  T
Q  195 cattttgtgtttt-ttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
      |||||| |||| ||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  1742229 tcttttgtatttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgat 1742302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 8212086 - 8211981
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||||||||| ||||||||| |||||||||||||||||||||||| ||| | || ||| ||||||||||| ||||||| | || ||    
T  8212086 taaataagtggttttcacatatatcaagttttcccttttgtgttttttgtgatttcgtcgtctaaatgcggcgttgtgttgttcatcgtcttgtgcggcg 8211987  T
Q  262 tttgat 267  Q
    ||||||    
T  8211986 tttgat 8211981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 32394837 - 32395005
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| |||||||||||||||||| ||| || |||||||| | |||||||||||| ||||| |||| ||  ||||| | |||||| ||||| ||    
T  32394837 atcgaggaggggtggttttaggtcattttttgacttagaatcatccctctgcatctttttccccttttctttcaatctaaatgagtggttttcacatcta 32394936  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | ||||||| | |||||||||||||||||||||||| |   |||| ||| |||||||| || |||||||    
T  32394937 tcaagtttttccttttgtgttttttgtgatttcgtcgttcaagtgcggcgttgtgttgctcatcgtctt 32395005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 7337917 - 7337748
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| ||||| || ||||||||| || ||| ||||| || | | |||||||||  ||| ||||||| ||  ||||||| |||||| ||||| |    
T  7337917 atcgaggagggatggttctatgtcattttttgatctagaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatct 7337818  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    || ||||||| | ||||||||||||||||||||| || ||| |||| ||| |||||||||||||||||||    
T  7337817 atcaagtttttccttttgtgttttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtctt 7337748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 252
Target Start/End: Complemental strand, 21947872 - 21947704
Alignment:
Q  88 atcgagga-gggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc---tttctttgaaattaaataattggtttccacatat 183  Q
    |||||||| |||||||||||||| |||||| ||||| |||||||| | | ||| ||||| |||   ||||||| ||  ||||||| |||||| ||||| |    
T  21947872 atcgaggatgggtggttttaggttatttttaacctagaatcatccatctacatatttttttccccttttctttcaatctaaataagtggttttcacatct 21947773  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtct 252  Q
    || |||||||   |||||||||||||||||||||||| ||| ||||  ||  |||||||||||||||||    
T  21947772 atcaagttttttcttttgtgttttttgtgatttcgtcgtctaagtgcagcgctgtgttgttcgtcgtct 21947704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 253
Target Start/End: Original strand, 31317639 - 31317757
Alignment:
Q  135 tgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggca 234  Q
    ||||||||||||  | |||||| || |||||||| |||||| |||| |||| ||||||| ||||||||||||||||| |||||||| | |||||| ||      
T  31317639 tgcatctttttcctcattctttcaatttaaataagtggttttcacacatatcaagtttttcattttgtgttttttgtaatttcgtcgtgtgagtgcggtg 31317738  T
Q  235 ttgtgttgttcgtcgtctt 253  Q
    ||||||| |||||||||||    
T  31317739 ttgtgttattcgtcgtctt 31317757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 247
Target Start/End: Original strand, 15492142 - 15492297
Alignment:
Q  97 ggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttcca 196  Q
    |||||||||||||| ||||||||||||||||||| || |||||||||||| | ||||||| ||  ||||||| || ||| ||||||||| |||||||       
T  15492142 ggtggttttaggtcttttttgacctaaaatcatcattttgcatctttttc-catttctttcaatctaaataaatgattttcacatatatcaagttttttc 15492240  T
Q  197 ttttgtgttttt------tgtgatttcgtcatctgagtgtggcattgtgttgttcgt 247  Q
    ||||||||||||      ||||||||| || |||||||| | | |||||||||||||    
T  15492241 ttttgtgttttttctttgtgtgatttcatcgtctgagtgcgacgttgtgttgttcgt 15492297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 267
Target Start/End: Original strand, 45415394 - 45415579
Alignment:
Q  85 tttatcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccaca 180  Q
    |||||||||||||| |||||||||||||||||| || ||| ||||| || | | |||||||||  ||  ||||||| || |||||||| |||||| ||||    
T  45415394 tttatcgaggaggggtggttttaggtcattttttgatctagaatcacccctctacatcttttttccccttttctttcaatttaaataagtggttttcaca 45415493  T
Q  181 tatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | ||| |||||||   || ||| ||||||||||||||||| ||| |||| ||| || |||||||||||||||| | | |||||||||    
T  45415494 tctatcaagttttttcttgtgt-ttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcatcgtttgat 45415579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 255
Target Start/End: Original strand, 44543119 - 44543279
Alignment:
Q  95 agggtggttttaggtcatt-tttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    |||||| |||||||| ||| ||||||||||||||| |||  |||||||||||  |||||||||  |  ||||||| || ||| |||| |||| |||| ||    
T  44543119 agggtgcttttaggttattctttgacctaaaatcagcctc-tgcatcttttttccctttctttcgatctaaataagtgattttcacaaatatcaagtgtt 44543217  T
Q  194 ccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttat 255  Q
       |||||||||||||||||||||||| ||| |||| | | |||||||||||||||| ||||    
T  44543218 ttcttttgtgttttttgtgatttcgtcgtctaagtgcgactttgtgttgttcgtcgtattat 44543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 267
Target Start/End: Original strand, 940214 - 940384
Alignment:
Q  98 gtggttttaggtcatttttgacctaaaatcatccttatgcatctt-tttctccttt-ctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    ||||||||| ||||||||| ||||| ||||| || | |||||||| |||| ||||| |||| || |||||||| |||||| ||||||||| |||||||      
T  940214 gtggttttaagtcattttttacctagaatcacccatctgcatcttgtttccccttttcttttaatttaaataagtggttttcacatatatcaagtttt-- 940311  T
Q  196 att--ttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     ||  ||||||||||||||||| |||| ||| |||| ||  |||||||||| |||||||| | || ||||||||    
T  940312 -ttccttgtgttttttgtgattccgtcgtctaagtgcggtgttgtgttgtttgtcgtcttgtgcgacgtttgat 940384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 45789415 - 45789510
Alignment:
Q  99 tggttttaggtcatttt-tgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||||||||| ||||||| ||||| || | |||||||||||| ||||||||| || |||||||| |||||| ||||| ||| |||||||    
T  45789415 tggttttaggtcattttttgacctagaatcacccctctgcatctttttcccctttctttcaatttaaataagtggttttcacatgtattaagtttt 45789510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 49626748 - 49626918
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatt-tttgacctaaaatcatccttatgcatcttttt-ctcctttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| || | ||||||||||| | |||||||||  |  ||||||| || ||| |||| |||    
T  49626748 atcgaggaggggtggttttaggtcattctttgacctaaaatcacccctctgcatcttttttcccctttctttctatctaaataagtgattttcacaaata 49626847  T
Q  185 taaag--ttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | |||  |||||  || ||| ||||||||||||||||| |||  ||| | | |||||||||||||||||||    
T  49626848 tcaagcgttttcttttgtgttttttttgtgatttcgtcgtctatgtgcgaccttgtgttgttcgtcgtctt 49626918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 11462693 - 11462519
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc---tttctttgaaattaaataattggtttccacatatataaagtt 191  Q
    ||||| |||||||| |||||| |||||| ||||| || | |||||||||||  ||   ||||||| ||  ||||||| ||| || ||||| ||| |||||    
T  11462693 gggtgattttaggttattttttgacctagaatcacccctctgcatcttttttcccctttttctttcaatctaaataagtgggtttcacatctatcaagtt 11462594  T
Q  192 ttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||   |||||||||||| ||||||||||||||| |||  |||||| |||||||||||||||| | || ||||||||    
T  11462593 ttttcttttgtgttttt-gtgatttcgtcatctaagtccggcattttgttgttcgtcgtcttgtgcggcgtttgat 11462519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 14872556 - 14872661
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| ||||||  ||| |||| ||||||| |  ||||||||||||||||||| ||| ||  |||| ||||||||||||||||||||||| | || ||    
T  14872556 taaataagtggtttttacaaatatcaagtttttccatttgtgttttttgtgattttgtcgtccaagtgcggcattgtgttgttcgtcgtcttgtgcggcg 14872655  T
Q  262 tttgat 267  Q
    ||||||    
T  14872656 tttgat 14872661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 16161726 - 16161838
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtg 239  Q
    |||||||||||| ||| ||  ||||||| || |||||||||| || ||||||| | ||||||||||||| ||||||||||| ||| |||| | | |||||    
T  16161726 tttttctcctttatttcaatctaaataagtgatttccacatacatcaagtttttc-ttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtg 16161824  T
Q  240 ttgttcgtcgtctt 253  Q
    ||||||||||||||    
T  16161825 ttgttcgtcgtctt 16161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 10776602 - 10776532
Alignment:
Q  197 ttttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||| |||||||||||| ||| ||| |||| ||| ||||||||||||||||||||| || ||||||||    
T  10776602 ttttgtgctttttgtgatttagtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcggcgtttgat 10776532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 23291881 - 23291735
Alignment:
Q  102 ttttaggtcattttt-gacctaaaatcatccttatgcatcttttt-ctcctttctttgaaattaaataattggtttccacatatataaagttttccattt 199  Q
    ||||||||||||||| |||||| ||||| || |   ||||||||| ||| ||||||| ||  ||||||| |||||| ||||||||| |||||||   |||    
T  23291881 ttttaggtcattttttgacctagaatcacccctcgacatcttttttctcttttctttcaatctaaataagtggttttcacatatatcaagttttttcttt 23291782  T
Q  200 tgtgtt-ttttgtgatttcgtcatctgagtgtggcattgtgttgttc 245  Q
    |||||| ||||||||||||||| ||| |||  ||| |||||||||||    
T  23291781 tgtgtttttttgtgatttcgtcgtctaagtacggcgttgtgttgttc 23291735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 26535284 - 26535366
Alignment:
Q  137 catctttttctccttt-ctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcg 218  Q
    |||||||||||||||| |||| ||  ||||||| |||||| ||||||||| ||||||| | ||||||||| ||||||||||||    
T  26535284 catctttttctccttttctttcaatctaaataagtggttttcacatatattaagtttttccttttgtgttatttgtgatttcg 26535366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 5983753 - 5983857
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||||| ||| |||||||   ||||||||||| |||||||||||| ||| |||| ||| || |||||||||||||||| | || ||    
T  5983753 taaataaatggttttcacatctatcaagtttttgcttttgtgtttt-tgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcg 5983851  T
Q  262 tttgat 267  Q
    ||||||    
T  5983852 tttgat 5983857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 250
Target Start/End: Original strand, 50377166 - 50377332
Alignment:
Q  88 atcgaggagggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatat 185  Q
    ||||| |||| |||||||||||||||||| |||||| |||||||| | | ||| |||||| | ||| |||| || |||||||| |||||| |||||||||    
T  50377166 atcgaagaggatggttttaggtcattttttgacctagaatcatccctct-catttttttcccattttctttcaatttaaataagtggttttcacatatat 50377264  T
Q  186 aaa---gttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgt 250  Q
     |    || || | |||||| ||||||||||||||||| ||| |||  ||| ||||||||||||||||    
T  50377265 tatcacgtgtttccttttgtattttttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgt 50377332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 27580361 - 27580216
Alignment:
Q  107 ggtcatttttgacctaaaatcatccttatgcatctttttct---cctttctttgaaattaaataattggtttccacatatataaagttttccattttgtg 203  Q
    |||||||||||||||| |||||||| | | ||||||||| |   |||||| || ||  || |||| |||||| ||||||||| ||||||| | ||||||     
T  27580361 ggtcatttttgacctagaatcatccctctacatcttttttttttcctttcattcaatctatataagtggttttcacatatatcaagtttttccttttgta 27580262  T
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgt 250  Q
    ||||| ||||||||||| | | | || ||| ||||||||||||||||    
T  27580261 ttttt-gtgatttcgtcgtttaaatgcggcgttgtgttgttcgtcgt 27580216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 244
Target Start/End: Original strand, 31984028 - 31984176
Alignment:
Q  97 ggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    |||||||||||||||||||| |||||| || || |  | | ||||||||| |||  |||||||  |  ||||||| |||||| ||||||||| |||||||    
T  31984028 ggtggttttaggtcattttttgacctagaagcacctctctacatctttttttcccttttctttcgatctaaataagtggttttcacatatatcaagtttt 31984127  T
Q  194 ccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgtt 244  Q
     | ||  |||||||||||||||||||| ||| |||| ||| ||||||||||    
T  31984128 tcctt--gtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgtt 31984176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 35484588 - 35484476
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgt 240  Q
    |||||| | ||||||| ||  ||||||| |||||| ||||| ||| |||||||     |||||||||||||| ||||||| ||| |||| ||| ||||||    
T  35484588 tttttcccttttctttcaatctaaataagtggttttcacatctatcaagttttttcaattgtgttttttgtggtttcgtcgtctaagtgcggcgttgtgt 35484489  T
Q  241 tgttcgtcgtctt 253  Q
    |||||||||||||    
T  35484488 tgttcgtcgtctt 35484476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 39888087 - 39888199
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgt 240  Q
    |||||||||||||||| ||  | ||||| |||||| |||||||||  ||||||   |||| |||||||||| |||||||| ||| |||| ||| |||||     
T  39888087 tttttctcctttctttaaatcttaataagtggttttcacatatatctagttttttcttttatgttttttgttatttcgtcgtctaagtgcggcgttgtgg 39888186  T
Q  241 tgttcgtcgtctt 253  Q
    ||||| |||||||    
T  39888187 tgttcttcgtctt 39888199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 253
Target Start/End: Original strand, 9341572 - 9341731
Alignment:
Q  96 gggtggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    |||||||||||||||| |||||||| || ||||| |  ||||||||||||||  |||||||| ||  |||||||    ||| ||||||||| |||| ||     
T  9341572 gggtggttttaggtcattttttgacttagaatcacctgtatgcatctttttcctctttctttcaatataaataagaaattttcacatatatcaagtgttt 9341671  T
Q  195 cattttgtgttttt-tgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
      ||||||||||||  ||||||||||| ||||||||  |  || ||||||||||||||||    
T  9341672 tcttttgtgtttttacgtgatttcgtcgtctgagtggagtgttatgttgttcgtcgtctt 9341731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 47132793 - 47132904
Alignment:
Q  140 ctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgt 238  Q
    ||||||| | ||||||| ||  ||||||| || |||| |||||||| |||| ||   ||||||| ||||| ||||||||||| |||||||| ||| ||||    
T  47132793 ctttttcccttttctttcaatctaaataagtgatttctacatatatcaagtgttttcttttgtgctttttcgtgatttcgtcgtctgagtggggcgttgt 47132892  T
Q  239 gttgttcgtcgt 250  Q
    ||||||||||||    
T  47132893 gttgttcgtcgt 47132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 32679344 - 32679183
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatct-ttttctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||| ||||||||| ||| || |||||||| | |||| |  |||| || ||||||| || |||||||| || ||||||||||||| || | ||    
T  32679344 gggtggttttatgtcattttttgacatagaatcatccctctgcaccaattttatcttttctttcaatttaaataagtgatttccacatatatcaattgtt 32679245  T
Q  194 ccattttgtgtttttt--gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
      ||||||  ||||||  |||||||| || |||||||| ||| |||||||||||||| ||||    
T  32679244 ttattttggttttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatctt 32679183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 13145036 - 13144907
Alignment:
Q  115 ttgacctaaaatcatccttatgcatcttttt-ctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtga 213  Q
    |||||||| |||||||| | | ||| ||||| | ||||||||| ||  ||||||| |||||| || |||||| || |||| | ||||||||||||| |||    
T  13145036 ttgacctagaatcatccctctacatatttttacccctttctttcaatctaaataagtggttttcatatatatcaactttttccttttgtgttttttttga 13144937  T
Q  214 tttcgtcatctgagtgtggcattgtgttgt 243  Q
    ||||||| ||| | || ||| |||||||||    
T  13144936 tttcgtcgtctaaatgcggcgttgtgttgt 13144907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 21686831 - 21686894
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||||||||||||| ||| |||  ||| ||||||||||||||||||| | || ||||||||    
T  21686831 ttttttgtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 21686894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 36775920 - 36775802
Alignment:
Q  135 tgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggc 233  Q
    |||||||||||  ||||||||| ||  ||||||| || ||| |||||| || ||||||| | ||| ||||||||| |||||||| |||| | |||| | |    
T  36775920 tgcatcttttttccctttctttcaatctaaataaatgattttcacatacatcaagtttttc-tttcgtgttttttcgtgatttcttcattttagtgcgac 36775822  T
Q  234 attgtgttgttcgtcgtctt 253  Q
     |||||||||||||||||||    
T  36775821 gttgtgttgttcgtcgtctt 36775802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 15435113 - 15434946
Alignment:
Q  100 ggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    ||||||||||||||||| || ||| ||||| || | | |||||||||  ||||| |||| ||  ||||||| || ||| |||||| || ||||||| | |    
T  15435113 ggttttaggtcattttttgatctagaatcaaccctctacatcttttttcccttttctttcaatctaaataagtgtttttcacataaatcaagtttttcct 15435014  T
Q  198 tttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    |||||  |||| ||||||||||| ||| |||| ||| || |||||||||| ||||| | || ||||||||    
T  15435013 tttgt--ttttagtgatttcgtcgtctaagtgcggcgttctgttgttcgttgtcttgtgcggcgtttgat 15434946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 7836928 - 7836867
Alignment:
Q  206 ttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    |||||||||||| || ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  7836928 ttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtttgat 7836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 19060865 - 19060914
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||||||||||||| ||| |||| | | |||||||||||||||||||    
T  19060865 ttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtctt 19060914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 208
Target Start/End: Complemental strand, 29738890 - 29738766
Alignment:
Q  88 atcgaggaggg-tggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctccttt--ctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| ||||||||||||| ||||| ||||| ||||| || | | |||||||||| |||||  |||| ||  ||||||| |||||| ||||| |    
T  29738890 atcgaggaggggtggttttaggtcaattttttacctagaatcacccctctacatctttttcccctttttctttcaatctaaataagtggttttcacatct 29738791  T
Q  184 ataaagttttccattttgtgttttt 208  Q
    || |||||||   ||||||||||||    
T  29738790 atcaagttttttcttttgtgttttt 29738766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 37720318 - 37720251
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt 209  Q
    |||||||||||||||| ||  ||||||| || |||||||||| || ||||||| | |||||||||||||    
T  37720318 tttttctcctttctttcaatctaaataagtgatttccacatacatcaagtttttc-ttttgtgtttttt 37720251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 12199934 - 12199781
Alignment:
Q  97 ggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttcca 196  Q
    |||||| ||| |||||||||||| || ||||| || | |||||||||||| ||||||||| || ||| |||  |||||| |||| |||  |||||||| |    
T  12199934 ggtggtattaagtcatttttgacatagaatcacccatctgcatctttttcccctttctttcaatttacatatgtggttttcacacatagcaagttttcta 12199835  T
Q  197 ttttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgt 250  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  12199834 ttttgtgttttttgtgatttcgtcgtctgagtgtggcgttgtgttgttcatcgt 12199781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 22611048 - 22611221
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||||||||||||||||||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||||| ||| ||||||     
T  22611048 gggtggttttaggtcatttttgacctagaatcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagttta 22611147  T
Q  194 ccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     | |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  22611148 tccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 22611221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 10259136 - 10258979
Alignment:
Q  99 tggttttaggtcatttttgacctaaaatcatccttatgcatc--tttttctcctttctttgaaattaaataattggtttccacatatataaagttttcca 196  Q
    |||||||||||||||||||||||||||||| || | | ||||  |||||||| |||||||  |  |||| || |||||| ||||||||| |||||||||     
T  10259136 tggttttaggtcatttttgacctaaaatcacccctctacatcgttttttctcttttctttcgatctaaacaaatggttttcacatatatcaagttttccc 10259037  T
Q  197 ttttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttat 255  Q
    ||||| |||||| ||||||||||||||| | ||||||||||||||||| || |||||||    
T  10259036 ttttgagttttt-gtgatttcgtcatctaattgtggcattgtgttgttagtggtcttat 10258979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 26633915 - 26633756
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttc-tcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||| ||||||||||||| |||||| ||||| || ||| |||||||||| || ||||||| ||  ||||||| |||||| ||||| ||| |||||||    
T  26633915 gggtggtcttaggtcattttttgacctagaatcacccctatacatctttttcctcttttctttcaatctaaataagtggttttcacatctatcaagtttt 26633816  T
Q  194 ccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
       |||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||    
T  26633815 ttcttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtctt 26633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 255
Target Start/End: Complemental strand, 19853765 - 19853595
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| |||||||||||||||||||||||| ||||| || | | |||||||||  ||  ||||||  ||  ||||||| |||||| ||||| ||    
T  19853765 atcgaggaggggtggttttaggtcatttttgacctagaatcacccctctacatcttttttccccttttcttccaatctaaataagtggttttcacatcta 19853666  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttat 255  Q
    | |||||||   |||| ||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||    
T  19853665 tcaagttttttcttttttgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttat 19853595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 21686494 - 21686313
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| |||||| ||||| ||||||||||||||||| || | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||||| ||    
T  21686494 atcgaggaggggtggtttgaggtcttttttgacctaaaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatcta 21686395  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | ||||||| | |||||||||||||||||||||||| ||| |||| |||  |||||||||||||||||| | || ||||||||    
T  21686394 tcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggc-gtgtgttgttcgtcgtcttgtgcggcgtttgat 21686313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 13633969 - 13634139
Alignment:
Q  88 atcgaggag-ggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc----tttctttgaaattaaataattggtttccacata 182  Q
    ||||||||| ||||||||||||||||||||||| || ||||| || | | |||||||| | ||    ||||||| ||  ||||||| |||||| |||||     
T  13633969 atcgaggagtggtggttttaggtcatttttgacatagaatcacccctctacatcttttccccccccttttctttcaatctaaataagtggttttcacatc 13634068  T
Q  183 tataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||| |||||||   |||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||    
T  13634069 tatcaagttttttcttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtctt 13634139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 53810883 - 53811066
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| || | | |||||||||| ||  ||||||| || |||||||| || ||| ||||| |    
T  53810883 atcgaggaggggtggttttaggtcattttttgacctataatcacccctctacatctttttcccccttttctttcaatttaaataagtgattttcacatct 53810982  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || ||||| | | ||||||||||||||| |||||||||||| | || ||| || |||||||||||||||| | || ||||||||    
T  53810983 atcaagttattccttttgtgttttttgtcatttcgtcatctaaatgcggcgttttgttgttcgtcgtcttgtgcggcgtttgat 53811066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 4143008 - 4142840
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| || |||| |||| |    
T  4143008 atcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgttttc-acatct 4142910  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    || ||||||| | |||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||    
T  4142909 atcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtctt 4142840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 267
Target Start/End: Original strand, 54021722 - 54021898
Alignment:
Q  93 ggagggtggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatatataaag 189  Q
    |||| ||||||||||||||||||| ||| ||||||||||| | | |||||||||  ||| ||||||| ||  ||||||| |||||| |||||||||  ||    
T  54021722 ggagagtggttttaggtcattttttgacataaaatcatccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatccag 54021821  T
Q  190 ttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    |||| | ||||||||||| |||||||||||  ||| | || |||||||||||||| |||||||| | || ||||||||    
T  54021822 tttttccttttgtgtttt-tgtgatttcgttgtctaattgcggcattgtgttgttagtcgtcttgtgcggcgtttgat 54021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 52061160 - 52060994
Alignment:
Q  98 gtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    |||||||||||||  |||||| ||| ||| ||||   ||||||||||||    |||||| || |||||||| |||||| ||||||    ||||||| |||    
T  52061160 gtggttttaggtccgttttgatctagaataatcccc-tgcatctttttccatgttcttttaatttaaataagtggttttcacatagc--aagtttttcat 52061064  T
Q  198 tttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    |||||||||||| ||||||| || ||| |||||||||||||| ||||||||||||| |||| ||||||||    
T  52061063 tttgtgttttttatgatttcatcgtctaagtgtggcattgtgatgttcgtcgtcttgtacggcgtttgat 52060994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 5119272 - 5119377
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||||||||| ||||||| | ||||||||||| |||||||||||| ||| |||| || |||||||||||||| ||||| | || ||    
T  5119272 taaataagtggttttcacatatatcaagtttttccttttgtgttttgtgtgatttcgtcgtctaagtgcggtattgtgttgttcgttgtcttttgcggcg 5119371  T
Q  262 tttgat 267  Q
    ||||||    
T  5119372 tttgat 5119377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 267
Target Start/End: Original strand, 37030168 - 37030299
Alignment:
Q  135 tgcatctttt-tctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgt-tttttgtgatttcgtcatctgagtgtgg 232  Q
    |||||||||| |||||||||||| || |||||||| || ||| |||| |||| |||||||   | |||||| ||||||||||||||||||||||||  ||    
T  37030168 tgcatcttttctctcctttctttcaatttaaataaatgattttcacacatatcaagtttt---tattgtgtctttttgtgatttcgtcatctgagtacgg 37030264  T
Q  233 cattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | ||||||||||||||||||| || | ||||||||    
T  37030265 cgttgtgttgttcgtcgtcttgtatggcgtttgat 37030299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 33920916 - 33921089
Alignment:
Q  96 gggtggttttaggtcatttttg--acctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagtt 191  Q
    |||||||||||||||||||||   ||| |||| || || | | ||||||||| |||  ||||||| ||  ||||||| || ||| ||||||||| |||||    
T  33920916 gggtggttttaggtcatttttttaacccaaaagcacccatctacatctttttttcccttttctttcaa--taaataagtgattttcacatatatcaagtt 33921013  T
Q  192 ttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||   ||||||| |||||||||||||||| ||| |||| ||| |||||||||||| |||||||| || ||||||||    
T  33921014 ttttcttttgtgctttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgccgtcttatgcgacgtttgat 33921089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 40066252 - 40066138
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgt 240  Q
    |||| ||| ||||||| ||  ||||||| |||||| ||||||| | ||||||| | ||||||||||| ||||||||| || ||| |||| ||| ||||||    
T  40066252 ttttcctcttttctttcaatataaataagtggttttcacatattttaagtttttccttttgtgttttatgtgatttcatcgtctaagtgcggcgttgtgt 40066153  T
Q  241 tgttcgtcgtcttat 255  Q
    |||||||||||||||    
T  40066152 tgttcgtcgtcttat 40066138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 47158147 - 47158245
Alignment:
Q  149 ctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgt 247  Q
    |||||||| || |||||||| || ||||||||||||| |||||||   |||||||||||||||||||||||||||| |||| ||  || ||||||||||    
T  47158147 ctttctttcaatttaaataagtgatttccacatatatcaagttttttcttttgtgttttttgtgatttcgtcatctaagtgaggtgttttgttgttcgt 47158245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 24099325 - 24099152
Alignment:
Q  88 atcgaggag-ggtggttttaggtcattttt--gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacata 182  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||| | | |||||||||  ||  ||||||| ||  ||||||| || ||| |||||     
T  24099325 atcgaggagaggtggttttaggtcatttttttgacctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatc 24099226  T
Q  183 tataaagttttccattttgtgttttttg---tgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||| ||||| |||||||||| ||||||    |||||||||| ||| |||| |||||| ||||||||||||||||    
T  24099225 tatcaagttgtccattttgtatttttttgtatgatttcgtcgtctaagtgcggcattttgttgttcgtcgtctt 24099152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 267
Target Start/End: Complemental strand, 17949499 - 17949395
Alignment:
Q  163 aaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgt 262  Q
    |||||| |||||| |||| |||| ||||||| | |||||||||||||||||||||||| ||| |||| ||| |||||||||| ||||| || | || |||    
T  17949499 aaataagtggttttcacacatatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgt 17949400  T
Q  263 ttgat 267  Q
    |||||    
T  17949399 ttgat 17949395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 267
Target Start/End: Complemental strand, 17953351 - 17953247
Alignment:
Q  163 aaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgt 262  Q
    |||||| |||||| |||| |||| ||||||| | |||||||||||||||||||||||| ||| |||| ||| |||||||||| ||||| || | || |||    
T  17953351 aaataagtggttttcacacatatcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgt 17953252  T
Q  263 ttgat 267  Q
    |||||    
T  17953251 ttgat 17953247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 2520632 - 2520817
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| || | | |||||||||  ||  |||| || ||  ||||||| |||||| ||||| |    
T  2520632 atcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttcgttcaatctaaataagtggttttcacatct 2520731  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcat--tgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || |||||||   |||||||||||||||||||||||| ||| |||| ||  |  |||||||||||||||||| | || ||||||||    
T  2520732 atcaagttttttcttttgtgttttttgtgatttcgtcgtctaagtgcggtgttgtgtgttgttcgtcgtcttgtgcggcgtttgat 2520817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 32766378 - 32766552
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttt 192  Q
    ||||||||||||||||||||| |||||| ||||| || | | |||||||||  ||  ||||||| ||  ||| ||| || ||| ||||| ||| ||||||    
T  32766378 gggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaagtaagtgtttttcacatctatcaagttt 32766477  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | | ||||  |||||||||||||||||| ||| |||| ||  ||||||||||||||||||| | || ||||||||    
T  32766478 ttcctttttggttttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgat 32766552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 253
Target Start/End: Original strand, 22300701 - 22300870
Alignment:
Q  89 tcgaggagg-gtggttttaggtca-tttttgacctaaaatcatccttatgcat-ctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||| |||||||||||||| ||||||||||||||||| || | ||||| ||||||||| ||||||| || |||||||| || ||| ||| |||||    
T  22300701 tcgaggaggagtggttttaggtcattttttgacctaaaatcacccctttgcatcctttttctcttttctttcaatttaaataagtgattttcacgtatat 22300800  T
Q  186 aaagt--tttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     ||||  ||||  || |   ||||| ||||||||||| |||| ||| | | |||||||||||||||||||    
T  22300801 caagtgctttcttttgtacttttttcgtgatttcgtcgtctgtgtgcgacgttgtgttgttcgtcgtctt 22300870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 35348170 - 35348345
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||| ||||||||||||||| |||||| ||||| |  | | |||||||||  ||||| |||| ||  ||||||| |||||| |||| |||| |||||||    
T  35348170 gggtgattttaggtcattttttgacctagaatcacctctctacatcttttttcccttttctttcaatctaaataagtggttttcacaaatatcaagtttt 35348269  T
Q  194 ccattttgtgtttt---ttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     | |||||||||||   ||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  35348270 tc-ttttgtgtttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 35348345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 45418392 - 45418517
Alignment:
Q  98 gtggttttaggtcattttt-gacctaaaatcatccttatgca--tctttttctcctttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    ||||||||||||||||||| |||||| |||||||| | | ||  |||||| ||| ||||| | ||  |||||||  ||||| ||||||||| |||||||     
T  45418392 gtggttttaggtcattttttgacctagaatcatccctctacacctcttttcctcttttctctcaatataaataagaggttttcacatatatcaagttttt 45418491  T
Q  195 cattttgtgttttttgtgatttcgtc 220  Q
    | ||||||||||||||||||||||||    
T  45418492 ccttttgtgttttttgtgatttcgtc 45418517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 29120539 - 29120434
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| |||||||||    |||| | |||||||||||||||||||||||| ||| |||| |||  |||||||||| ||||||| |||| ||    
T  29120539 taaataagtggttttcacatatatccgatttttctttttgtgttttttgtgatttcgtcgtctaagtgcggcgctgtgttgttcatcgtcttgtacgacg 29120440  T
Q  262 tttgat 267  Q
    ||||||    
T  29120439 tttgat 29120434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 253
Target Start/End: Original strand, 9178221 - 9178377
Alignment:
Q  96 gggtggttttaggtcatttt-tgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttt 192  Q
    ||||||| |||||||||||| ||||||| ||||| |||| | |||||||||||||  ||||||| ||  ||||||| |||||| |||||||   |||| |    
T  9178221 gggtggtcttaggtcattttttgacctagaatcacccttctacatctttttctcccttttctttcaatctaaataaatggttttcacatat---aagtgt 9178317  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |  |||||||| ||||||||||||| |||||| |||| | | |||| ||||||||| ||||    
T  9178318 t-tattttgtgctttttgtgatttcatcatctaagtgcgacgttgtattgttcgtcatctt 9178377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 36194566 - 36194676
Alignment:
Q  86 ttatcgagga-gggtggttttaggtca-tttttgacctaaaatcatccttatgcatctttt-tctcctttctttgaaattaaataattggtttccacata 182  Q
    |||||||||| ||||| |||||| ||| |||||||||||||| ||||| | |||||||||| |||||||||||| || |||||||| || ||| ||||||    
T  36194566 ttatcgaggatgggtgattttagatcaatttttgacctaaaaacatccctctgcatcttttttctcctttctttcaatttaaataagtgattttcacata 36194665  T
Q  183 tataaagtttt 193  Q
     || |||||||    
T  36194666 catcaagtttt 36194676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 267
Target Start/End: Original strand, 43510062 - 43510235
Alignment:
Q  95 agggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagtt 191  Q
    |||||||||||||||||||||| |||||| |||||  | | | ||||||||| |||  ||||||| ||  ||||||| ||| || ||||| ||| |||||    
T  43510062 agggtggttttaggtcattttttgacctagaatcactcctctacatctttttttcccttttctttcaatctaaataagtggctttcacatttatcaagtt 43510161  T
Q  192 ttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || | ||| ||  |||||||||||||||| ||| |||| ||| ||||||| || |||||||| | || ||||||||    
T  43510162 tttcctttcgt--tttttgtgatttcgtcgtctaagtgcggcgttgtgttatttgtcgtcttgtgcggcgtttgat 43510235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 56156776 - 56156727
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  56156776 ttttttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtctt 56156727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 245
Target Start/End: Original strand, 52978691 - 52978839
Alignment:
Q  99 tggttttaggtcatttttgacctaaaatcatcctt---atgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    |||||||| |||||||||||||||||||||  |||   ||   ||||||| |||||| ||| ||  ||||||| || ||| ||||||||| ||||||| |    
T  52978691 tggttttatgtcatttttgacctaaaatcacgctttacatctttctttttttcctttatttcaatctaaataagtgattttcacatatatcaagtttttc 52978790  T
Q  196 attttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttc 245  Q
     ||| | |||||||||||||||| | ||| |||| ||| |||||||||||    
T  52978791 ctttgg-gttttttgtgatttcggcgtctaagtgcggcgttgtgttgttc 52978839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 38166362 - 38166313
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  38166362 ttttttgtgatttcgtcgtctgagtgcggcgttgtgttgttcgttgtctt 38166313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 267
Target Start/End: Original strand, 44596585 - 44596702
Alignment:
Q  150 tttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcg 249  Q
    ||||||| || ||||||||  | ||| ||||||||  |||||||   |||||||| |||||||||||| || ||| |||||| | |||| ||||||||||    
T  44596585 tttctttcaatttaaataaccgattttcacatataacaagttttttgttttgtgtattttgtgatttcctcgtctaagtgtgacgttgtattgttcgtcg 44596684  T
Q  250 tcttatacgtcgtttgat 267  Q
    |||| | || ||||||||    
T  44596685 tcttgtgcggcgtttgat 44596702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 263
Target Start/End: Original strand, 36161569 - 36161742
Alignment:
Q  88 atcgaggag-ggtggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||| || | ||||| |||||| | ||||||| ||  ||||||| || |||  ||||||||    
T  36161569 atcgaggagaggtggttttaggtcattttttgacctagaatcacccatctgcat-tttttcccatttctttcaatctaaataagtgatttttacatatat 36161667  T
Q  186 aaagttttccattttgtg-ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtt 263  Q
     || ||||   ||||||| |||||||||||||| || |||||||| ||  |||| |||||||| ||||| | |||||||    
T  36161668 caattttt---ttttgtgtttttttgtgatttcttcgtctgagtgcgg-gttgttttgttcgttgtcttgtgcgtcgtt 36161742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 253
Target Start/End: Original strand, 53443993 - 53444142
Alignment:
Q  99 tggttttaggtcatttttgacctaaaatcatccttatgcatctttttc-tcctttctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    |||||||||||||||||||||||| || || || | | ||| |||||  || ||| ||| || |||||||| ||||||| ||| |||| |||||||        
T  53443993 tggttttaggtcatttttgacctagaaacacccctctacattttttttgtcttttatttcaatttaaataagtggtttc-acacatatcaagtttt---- 53444087  T
Q  198 tttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     |||| ||||||||||||||||| ||| |||  | | |||||||||||||||||||    
T  53444088 -ttgttttttttgtgatttcgtcgtctaagtacgacgttgtgttgttcgtcgtctt 53444142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 52204469 - 52204419
Alignment:
Q  203 gttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||| ||||||||||||| |||||||| | ||| |||||||||||||||    
T  52204469 gtttttcgtgatttcgtcatttgagtgtgacgttgagttgttcgtcgtctt 52204419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 35395803 - 35395758
Alignment:
Q  208 ttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||| |||||||| |||||||| ||| |||||||||||||||||||    
T  35395803 ttgtaatttcgtcgtctgagtgcggcgttgtgttgttcgtcgtctt 35395758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 251
Target Start/End: Original strand, 9713819 - 9713931
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaag-ttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgt 238  Q
    |||||| ||||||||| ||  ||||||| || ||||||||||||| ||| |||| | |||||||||||||  | |||||||| |||||||  ||  ||||    
T  9713819 tttttcccctttctttcaatctaaataagtgatttccacatatatcaagttttttctttttgtgttttttctttatttcgtcgtctgagtaaggttttgt 9713918  T
Q  239 gttgttcgtcgtc 251  Q
    |||||||| ||||    
T  9713919 gttgttcgccgtc 9713931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 11300124 - 11300076
Alignment:
Q  205 tttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||||||| ||| |||| ||  |||||||||||||||||||    
T  11300124 tttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtctt 11300076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 29961101 - 29961009
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtg-atttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| || ||| ||||| ||| ||||||| | ||||||||||||| |  ||||| || ||| |||||||  |||||||||||||||||||    
T  29961101 taaataagtgattttcacatctatcaagtttttccttttgtgttttttttttatttcatcgtctaagtgtggggttgtgttgttcgtcgtctt 29961009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 7552 - 7720
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatttt-tgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||  | | |||||||||| | ||||||||| || |||||||| |||||| |||||||||    
T  7552 atcgaggagggatggttttaggtcattttttgacctagaatcactcatctgcatcttttacccctttctttcaatttaaataagtggttttcacatatat 7651  T
Q  186 aaagttttccattttgtg-ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     ||||||| | ||||||| |||||||||| || |||||||||||| ||| |||||||||| ||||||||    
T  7652 caagtttttccttttgtgtttttttgtgaatttgtcatctgagtgcggcgttgtgttgtttgtcgtctt 7720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 33053422 - 33053239
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||| | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||||| |    
T  33053422 atcgaggaggggtggttttaggtcattttttgacctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatct 33053323  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || ||||||| | |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  33053322 atcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 33053239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 253
Target Start/End: Original strand, 30493371 - 30493534
Alignment:
Q  89 tcgaggagggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataa 187  Q
    |||| |||||||||||| |||||||||| |||||| ||||| ||  ||||||||||||  ||||||||| ||| ||||||| || ||||||||||||| |    
T  30493371 tcgaagagggtggttttcggtcattttttgacctagaatcaccc--atgcatcttttttccctttctttcaaactaaataagtgatttccacatatatca 30493468  T
Q  188 agttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||| ||   |||||||||||| |||||||| || |||||||| ||  |||||||||||||||||||    
T  30493469 agtgttttcttttgtgtttttcgtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtctt 30493534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 100 - 253
Target Start/End: Original strand, 34018409 - 34018565
Alignment:
Q  100 ggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttttcca 196  Q
    ||||||||||||||||| |||||| ||||| || | | ||||| |||  ||  ||||||| || |||||||| |||||| ||||||||| |||||||       
T  34018409 ggttttaggtcattttttgacctagaatcacccctctacatctctttacccattttctttcaatttaaataagtggttttcacatatatcaagttttttc 34018508  T
Q  197 ttttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  34018509 ttttgtgttttttgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtctt 34018565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 253
Target Start/End: Original strand, 127516 - 127675
Alignment:
Q  91 gaggagggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaag 189  Q
    ||||||||||||||||||| |||||||| ||||||||| || | | |||||||||| | ||| ||||     ||||||| |||||| ||||||||| |||    
T  127516 gaggagggtggttttaggt-atttttgatctaaaatcacccctctacatctttttcccattttctttcc---taaataagtggttttcacatatatcaag 127611  T
Q  190 ttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||| | |||||||||||||||||||||||| ||| ||||  || |||||||||||||||||||    
T  127612 tttttccttttgtgttttttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtctt 127675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 3913827 - 3913659
Alignment:
Q  88 atcgaggagggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttct--ttgaaattaaataattggtttccacatata 184  Q
    ||||||||||||||||||||||||||||| |||||| ||||| || |  ||||||||||  || ||||  || ||  ||||||| |||||| ||||| ||    
T  3913827 atcgaggagggtggttttaggtcattttttgacctagaatcacccctccgcatcttttttcccattctctttcaatctaaataagtggttttcacatcta 3913728  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | |||||||   ||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||||||    
T  3913727 tcaagttttttcttttgtgttttttgttatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtctt 3913659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 68254 - 68072
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatttttgacctaaaatcatcct-tatgcatctttttctccttt-ctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| ||||||||||| |||||||||||| ||||| ||  | | |||||||||| ||||| |||| ||  ||||||| |||||| ||||| ||    
T  68254 atcgaggagggatggttttaggtaatttttgacctagaatcaccccctctacatctttttccccttttcttttaatctaaataagtggttttcacatcta 68155  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | ||||||| | |||||||||||||||||||||||| ||| |||||||  ||||||| |||  |||||| | || ||||||||    
T  68154 tcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgtggtgttgtgttattcaccgtcttgtgcggcgtttgat 68072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 267
Target Start/End: Complemental strand, 30608754 - 30608585
Alignment:
Q  99 tggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc-tttctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    |||||||||||||||||||||||| ||||| || | | ||| ||||||||| ||||||| ||  ||||| | |||||| ||||||||| ||||||| |||    
T  30608754 tggttttaggtcatttttgacctagaatcacccctctacatatttttctccttttctttcaatctaaattagtggttttcacatatatcaagtttt-cat 30608656  T
Q  198 tttgtgttttttgtgatttcgtcatctgag-tgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||| ||||||||||||||||| ||| || |  | | ||||||||||||||||||| | || ||||||||    
T  30608655 tttgtattttttgtgatttcgtcgtctaagttacgtcgttgtgttgttcgtcgtcttgtgcggcgtttgat 30608585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 253
Target Start/End: Original strand, 23128468 - 23128623
Alignment:
Q  101 gttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    |||||||||||||||| |||||| ||||| || | | |||||||||| ||  ||||||| |   ||||||| |||||| ||||| ||| ||||||| | |    
T  23128468 gttttaggtcattttttgacctagaatcacccctctacatctttttccccattttctttcattctaaataagtggttttcacatctatcaagtttttcct 23128567  T
Q  198 tttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||| |||||||||||||| || ||| |||| ||| |||||||||||||||||||    
T  23128568 tttgtattttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtctt 23128623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 245
Target Start/End: Original strand, 25092325 - 25092472
Alignment:
Q  95 agggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    ||||||||||| | |  |||||| |||||||||| ||  ||||||||| || || | ||||| ||  ||||||| ||||||||||||| ||  ||||||     
T  25092325 agggtggtttttgatattttttggcctaaaatcacccaaatgcatcttctt-tcttctcttttaatctaaataaatggtttccacatagatcgagtttt- 25092422  T
Q  195 cattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttc 245  Q
     |  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  25092423 -aacttgtgttttttgtgatttcgtcatctgagtgtggcgttgtgttgttc 25092472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 253
Target Start/End: Original strand, 28981027 - 28981179
Alignment:
Q  99 tggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccatt 198  Q
    |||||||||||||||||||||||| ||| || |||  | ||||||||  ||||||||| ||  ||||||| || ||||||||||||| |||| ||   ||    
T  28981027 tggttttaggtcatttttgacctagaattattcttccgtatcttttttccctttctttcaatctaaataagtgatttccacatatatcaagtgtt--ttt 28981124  T
Q  199 ttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    || | |||||||||||||  || |||||||  ||| |||||||||||||||||||    
T  28981125 tttttttttttgtgattttatcgtctgagtacggcgttgtgttgttcgtcgtctt 28981179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 88 - 229
Target Start/End: Original strand, 12170331 - 12170476
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||||| |    
T  12170331 atcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatct 12170430  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtg 229  Q
    || ||||||| | |||||||||||||||||||||||| ||| ||||    
T  12170431 atcaagtttttcgttttgtgttttttgtgatttcgtcgtctaagtg 12170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 267
Target Start/End: Original strand, 32059755 - 32059928
Alignment:
Q  97 ggtggttttaggtcatt-tttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    |||||||||| |||||| ||||||||| |||||||||| | |||||||||| | ||||||| ||  ||||||| | |||| ||||| ||| |||||||      
T  32059755 ggtggttttaagtcattgtttgacctagaatcatccttctacatctttttcccttttctttcaatctaaataagtagttttcacatgtatcaagtttttt 32059854  T
Q  196 att-ttgtgtttt-ttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     || || |||||| |||||||||| || ||| |||||| | ||||||||||||||||||| | || ||||||||    
T  32059855 tttcttctgtttttttgtgatttcttcgtctaagtgtgacgttgtgttgttcgtcgtcttgtgcggcgtttgat 32059928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 32327393 - 32327288
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||||| ||| ||||||| | ||||||||||||||||||||| |  ||| |||| ||| ||||||||||||||||||| | || ||    
T  32327393 taaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcatagtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcg 32327294  T
Q  262 tttgat 267  Q
    ||||||    
T  32327293 tttgat 32327288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 253
Target Start/End: Original strand, 30776511 - 30776670
Alignment:
Q  96 gggtggttttaggtca-tttttgacctaaaatcatccttatgcatcttttt-ctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||| |||||||||| ||||||||||| ||||| || | ||||| ||||| ||||||||||| ||  ||||||| |  |||||||||| || |||||||    
T  30776511 gggtgattttaggtcaatttttgacctagaatcacccctctgcatattttttctcctttctttcaatctaaataagtaatttccacatacatcaagtttt 30776610  T
Q  194 ccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     | ||||||||||||| ||||||||||| ||| |||| | | |||||||||||||| ||||    
T  30776611 tc-ttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatctt 30776670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 606118 - 606223
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||||| ||| || |||| | ||||||||| |||||||||||||| ||| |||| ||| |||||||||||||| |||| | || ||    
T  606118 taaataagtggttttcacatctatcaaatttttccttttgtgttatttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggcg 606217  T
Q  262 tttgat 267  Q
    ||||||    
T  606218 tttgat 606223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 267
Target Start/End: Complemental strand, 13546864 - 13546734
Alignment:
Q  135 tgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggca 234  Q
    ||||||||||||  ||||||||  | |||||||||||||||  ||| |    |||||||  || ||||||||||||| |||||||| | |||||| |||     
T  13546864 tgcatctttttcatctttctttccatttaaataattggtttttacacacc--aagttttttatcttgtgttttttgtaatttcgtcgtttgagtgcggcg 13546767  T
Q  235 ttgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||||||||||||||||| || ||||||||    
T  13546766 ttgtgttgttcgtcgtcttatgcggcgtttgat 13546734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 31852323 - 31852273
Alignment:
Q  203 gttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||||||||| |||||||| | | |||||||||||||||||||    
T  31852323 gttttttgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtctt 31852273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 29320030 - 29319949
Alignment:
Q  187 aagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||| | ||||||||||||| ||||||| ||| ||| |||| ||| |||||||||||||| |||||| || ||||||||    
T  29320030 aagtttttccttttgtgtttttttgtgattttgtcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggcgtttgat 29319949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 7515377 - 7515287
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| |||||| ||||| ||| ||||||    |||||||||||| ||||||||||| ||| |||| ||| || ||||||||||||||||    
T  7515377 taaataagtggttttcacatctatcaagtttcttcttttgtgttttt-gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtctt 7515287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 4352108 - 4352050
Alignment:
Q  197 ttttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttat 255  Q
    |||||| || || |||||||||||||| ||||||||   ||||||||||||||||||||    
T  4352108 ttttgtcttcttcgtgatttcgtcatccgagtgtggtgatgtgttgttcgtcgtcttat 4352050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 7976355 - 7976265
Alignment:
Q  164 aataattggtttccacatatataaa-gttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||| || |||||||||||||||  ||||||  || ||| ||||| ||||||||||| |||||||| |   |||||||||||||||||||    
T  7976355 aataagtgatttccacatatataagtgttttcttttgtgtttttttcgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtctt 7976265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 11321666 - 11321560
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgt 240  Q
    |||||||  ||||||| ||  ||||||| |||||| ||||||||| |||||||   ||||||||  ||| |||||||||| ||| |||| ||  ||||||    
T  11321666 tttttctattttctttcaatctaaataagtggttttcacatatattaagttttttcttttgtgtaatttatgatttcgtcgtcttagtgcggtgttgtgt 11321567  T
Q  241 tgttcgt 247  Q
    |||||||    
T  11321566 tgttcgt 11321560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 8102612 - 8102724
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtg 239  Q
    |||||||||||||||| ||  ||||||| || ||| |||| | || ||||||| | ||||||||||||| ||||||||||| ||| ||||   | |||||    
T  8102612 tttttctcctttctttcaatctaaataagtgattttcacaaacatcaagtttttc-ttttgtgttttttcgtgatttcgtcgtcttagtgcaacgttgtg 8102710  T
Q  240 ttgttcgtcgtctt 253  Q
    || |||||||||||    
T  8102711 tttttcgtcgtctt 8102724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 14801776 - 14801825
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||| ||||||||||| ||| |||| | |||||||||||||||||||||    
T  14801776 tttttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtctt 14801825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 545861 - 546028
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatttttgacctaaaatcatccttatgcatc-tttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||||| || ||||||| ||||||||||||| |||||  ||| | |||| |||||| ||||||||| ||  |||||||    ||| |||||| ||    
T  545861 atcgaggaggggtgattttaggccatttttgacctagaatcactcttctacatcttttttcccctttctttcaatctaaataagcaattttcacatacat 545960  T
Q  186 aaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     ||||||| | ||| ||||||||| |||||||| || ||| |||| | | ||| |||||||||||||||    
T  545961 caagtttttc-tttcgtgttttttcgtgatttcatcgtcttagtgcgacgttgcgttgttcgtcgtctt 546028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 7976409 - 7976377
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatca 128  Q
    ||||||||||||||||||||||||||| |||||    
T  7976409 gggtggttttaggtcatttttgacctagaatca 7976377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 28635220 - 28635172
Alignment:
Q  210 gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacg 258  Q
    ||||||||||||| ||||||||||  | |||||||||||||||| ||||    
T  28635220 gtgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtacg 28635172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 8e-30; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 98 - 267
Target Start/End: Complemental strand, 7883481 - 7883310
Alignment:
Q  98 gtggttttaggtcatttttgacctaaaatcatccttatgcatcttttt---ctcctttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    ||||||||||||||||||||| ||| ||||| || | | |||||||||   ||| ||||||| ||  ||||||| |||||| ||||| ||| |||||||     
T  7883481 gtggttttaggtcatttttgatctataatcacccctctacatcttttttccctcttttctttcaatctaaataagtggttttcacatctatcaagttttt 7883382  T
Q  195 cattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  7883381 c-ttttgtgttttttgtgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 7883310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 5046588 - 5046722
Alignment:
Q  88 atcgaggagggtggttttaggtcatttttg--acctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    |||||||| ||||||||||||||||||||   ||||| ||||  || |||||||||||||| ||||||||| || |||||||| || ||| |||| ||||    
T  5046588 atcgaggaaggtggttttaggtcattttttttacctagaatcgcccctatgcatctttttcccctttcttttaatttaaataagtgattttcacacatat 5046687  T
Q  186 aaagttttccattttgtgttttttgtgatttcgtc 220  Q
     ||||||| | ||||||||||||| ||||||||||    
T  5046688 caagttttactttttgtgttttttatgatttcgtc 5046722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 103 - 253
Target Start/End: Complemental strand, 40619307 - 40619156
Alignment:
Q  103 tttaggtcatttttgacctaaaatcatccttatgcatcttttt-ctcctttctttgaaattaaataattggtttccacatatataaagttttccattttg 201  Q
    |||||||||||||||||||| |||||||| | | ||| ||||| ||| ||||| | ||  ||||||| || ||| ||||||||| ||||||| | |||||    
T  40619307 tttaggtcatttttgacctagaatcatccctctacatattttttctcttttctatcaatctaaataagtgattttcacatatatcaagtttttctttttg 40619208  T
Q  202 tgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||||||| || ||| |||| ||| |||||||||| ||||||||    
T  40619207 tgttttttgtgatttcatcgtctaagtgcggcgttgtgttgtttgtcgtctt 40619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 255
Target Start/End: Original strand, 3673295 - 3673449
Alignment:
Q  99 tggttttaggtcatttttgacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    |||||||||||||||||||||||| |||||||| | | |||||||| | ||||| |||| ||  ||||||| |||||  ||||||||   ||| || | |    
T  3673295 tggttttaggtcatttttgacctagaatcatccctctacatcttttgccccttttctttcaatctaaataagtggttatcacatata---agtgtttcct 3673391  T
Q  198 tttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttat 255  Q
    |||||  |||||||||||||||| ||| |||| ||  |||||||||||||||||||||    
T  3673392 tttgttctttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttat 3673449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 27498550 - 27498447
Alignment:
Q  150 tttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcg 249  Q
    ||||||| || |||||||| || |||  |||||||| ||||||| | |||| ||| |||||| |||||||| ||| |||||| |||||||||||||||||    
T  27498550 tttctttcaatttaaataagtgatttttacatatatcaagtttttccttttatgtattttgtaatttcgtcgtctaagtgtgccattgtgttgttcgtcg 27498451  T
Q  250 tctt 253  Q
    ||||    
T  27498450 tctt 27498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 18890948 - 18890789
Alignment:
Q  96 gggtggttttaggtca-tttttgacctaaaatcatccttatgcatcttttt-ctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||| |||||||||| ||||||||||| |||||  | | ||||||||||| | ||||||||| ||  ||||||| || ||| |||||  || |||||||    
T  18890948 gggtgattttaggtcaatttttgacctagaatcactcatctgcatcttttttcccctttctttcaatctaaataagtgattttcacatgcatcaagtttt 18890849  T
Q  194 ccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     | ||||||||||||| ||||||||||| ||| |||| | | |||||||||||||||||||    
T  18890848 tc-ttttgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctt 18890789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 253
Target Start/End: Complemental strand, 14545144 - 14544986
Alignment:
Q  98 gtggttttaggtcat-ttttgacctaaaatcatcct-tatgcatc--tttttctcctttctttgaaattaaataattggtttccacatatat-aaagttt 192  Q
    ||||||||||||||| |||||||||||||||| ||| | | ||||  |||||||| ||||||| ||  ||||||| |||||| ||||||||| ||| |||    
T  14545144 gtggttttaggtcattttttgacctaaaatcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacatatatcaaaattt 14545045  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||| ||||||  |||||||||||||||| ||| | || ||| |||| ||||| ||||||||    
T  14545044 tcc-ttttgt-atttttgtgatttcgtcgtctaattgcggcgttgttttgttagtcgtctt 14544986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 17693856 - 17693683
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatc-tttttctc-ctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    |||| |||||||||||||||||||||| |||||||| | | |||| ||||||||  ||||||| ||  ||||||| || |||  ||| |||| |||||||    
T  17693856 gggttgttttaggtcatttttgacctagaatcatccctctacatcttttttctcaatttctttcaatctaaataaatgttttgaacaaatatcaagtttt 17693757  T
Q  194 ccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     | |||||  |||| |||||||||||| ||| |||| ||  |||| ||||||||| |||| | || ||||||||    
T  17693756 tccttttgcattttatgtgatttcgtcgtctaagtgcggtgttgtattgttcgtcttcttgtgcggcgtttgat 17693683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 251
Target Start/End: Complemental strand, 24099512 - 24099343
Alignment:
Q  88 atcgaggagggtggttttaggtcatttttgacctaaaatcatccttatgcatctt-tttctcctttctttgaaattaaataattggtttccacatatata 186  Q
    |||||| ||||||| |||||||||||||||||||| ||||| || | ||||| || ||||  ||||||||  | |||||||| || |||||||||| ||     
T  24099512 atcgagtagggtggctttaggtcatttttgacctagaatcacccctctgcattttgtttcctctttctttcgatttaaataagtgatttccacatagatc 24099413  T
Q  187 aagttttccattttgtgttt-----tttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtc 251  Q
    |||| ||   |||| |||||     || ||||||||||| |||||||| | | |||||||||||||||||    
T  24099412 aagtgttttcttttttgttttattcttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtc 24099343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 27110707 - 27110548
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatatataaagttt 192  Q
    ||||||||||||||||||||| || |||||||||  | | | |||||||||  ||| ||||||| ||  ||||||| |||| | ||||||||| ||||||    
T  27110707 gggtggttttaggtcattttttgatctaaaatcacacatctacatcttttttactcttttctttcaatctaaataagtggtcttcacatatatcaagttt 27110608  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | | |||||||| |||||| |||||||||||| | ||  || |||||||| | ||||||||    
T  27110607 ttccttttgtgt-ttttgtaatttcgtcatctaattgcagcgttgtgttggtagtcgtctt 27110548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 20553441 - 20553310
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtt-----ttttgtgatttcgtcatctgagtgtggcat 235  Q
    |||||| | ||||||| ||  ||||||| || ||| ||||| ||| ||||||| | |||||||||     ||||||||||||||| ||| |||| ||| |    
T  20553441 tttttcccttttctttcaatctaaataagtgattttcacatctatgaagtttttccttttgtgtttttttttttgtgatttcgtcgtctaagtgcggcgt 20553342  T
Q  236 tgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | |||||||||||||||||| || ||||||||    
T  20553341 tttgttgttcgtcgtcttatgcggcgtttgat 20553310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 40211434 - 40211383
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttat 255  Q
    ||||||||||||||||| ||| | |||||| |||||||||||||||||||||    
T  40211434 ttttttgtgatttcgtcgtctaaatgtggcgttgtgttgttcgtcgtcttat 40211383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 3240291 - 3240393
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtc 260  Q
    ||||||| || ||||||||||||| |||| ||   ||||||||||||| ||||||||||| |||| ||    ||||||||||||||||||||| |||| |    
T  3240291 taaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgatttcgtcgtctgtgtacatcattgtgttgttcgtcgtcttgtacgac 3240390  T
Q  261 gtt 263  Q
    |||    
T  3240391 gtt 3240393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 10377640 - 10377709
Alignment:
Q  198 tttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||||||||||||||||||  ||| |||| ||| |||||||||||| |||||| | || ||||||||    
T  10377640 tttgtgttttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgccgtcttgtgcggcgtttgat 10377709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 23230481 - 23230663
Alignment:
Q  88 atcgaggagggtggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctcc---tttctttgaaattaaataattggtttccacatat 183  Q
    |||||||| ||  ||||||||||| ||||||||| ||||||| || | | |||||||||  ||   ||||||| ||  ||||||| |||||| || || |    
T  23230481 atcgaggatgggtgttttaggtcaatttttgaccaaaaatcacccctctacatcttttttcccctttttctttcaatctaaataagtggttttcatatct 23230580  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || |||||||   ||||||||||| |||||||||||| ||| |||| |||  | |||||||||||||||| | || ||||||||    
T  23230581 atcaagttttttcttttgtgtttt-tgtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtttgat 23230663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 14916379 - 14916332
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatcttt 143  Q
    ||||||||||||||||||||||||||| ||||| || | |||||||||    
T  14916379 gggtggttttaggtcatttttgacctagaatcacccatctgcatcttt 14916332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 1236936 - 1236886
Alignment:
Q  96 gggtggttttaggtcatt-tttgacctaaaatcatccttatgcatcttttt 145  Q
    |||||||||||||||||| ||||||||||||| |||| | |||||||||||    
T  1236936 gggtggttttaggtcattctttgacctaaaataatccctctgcatcttttt 1236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 8981043 - 8981093
Alignment:
Q  96 gggtggttttaggtcatttt-tgacctaaaatcatccttatgcatcttttt 145  Q
    |||||||||||||||||||| ||||||||||||| || |||||||| ||||    
T  8981043 gggtggttttaggtcattttttgacctaaaatcacccctatgcatcctttt 8981093  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 5333391 - 5333432
Alignment:
Q  212 gatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||||||||| ||  |||||||||||||||||||    
T  5333391 gatttcgtcatctgagtgcggtgttgtgttgttcgtcgtctt 5333432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 20559987 - 20559827
Alignment:
Q  96 gggtggttttaggtcatttttg-acctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    |||||||||||| ||||||||| ||||| ||||| || | | ||| |||| | | ||||||| ||  ||||||| || ||| ||||| ||| |||||||     
T  20559987 gggtggttttagatcatttttggacctagaatcacccctctacattttttccccttttctttcaatctaaataagtgattttcacatctatcaagttttt 20559888  T
Q  195 cattttgtgtttttt--gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | |||||| ||||||  ||||||||||| ||| ||||   | || ||||||||||||||||    
T  20559887 ccttttgtattttttttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgtctt 20559827  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 20571549 - 20571389
Alignment:
Q  96 gggtggttttaggtcatttttg-acctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    |||||||||||| ||||||||| ||||| ||||| || | | ||| |||| | | ||||||| ||  ||||||| || ||| ||||| ||| |||||||     
T  20571549 gggtggttttagatcatttttggacctagaatcacccctctacattttttccccttttctttcaatctaaataagtgattttcacatctatcaagttttt 20571450  T
Q  195 cattttgtgtttttt--gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | |||||| ||||||  ||||||||||| ||| ||||   | || ||||||||||||||||    
T  20571449 ccttttgtattttttttgtgatttcgtcgtctaagtgcatcgttttgttgttcgtcgtctt 20571389  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 24419342 - 24419265
Alignment:
Q  173 tttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgt 250  Q
    ||||||||||||| || ||||   ||||||||| ||||| ||||| || |||||||| ||| ||||||| ||||||||    
T  24419342 tttccacatatatcaaattttttcttttgtgttgtttgtaatttcttcgtctgagtgcggcgttgtgtttttcgtcgt 24419265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 37971242 - 37971303
Alignment:
Q  206 ttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||||||||||| ||| |||| ||| || |||||||||||||||| | || ||||||||    
T  37971242 ttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgat 37971303  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 8826159 - 8826215
Alignment:
Q  197 ttttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||| ||||| ||||||||||| ||||||||  || || ||||||||||||||||    
T  8826159 ttttgtttttttcgtgatttcgtcgtctgagtgcagcgttatgttgttcgtcgtctt 8826215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 28086952 - 28086896
Alignment:
Q  197 ttttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| |||||||||||||||| ||| ||||  || |||||||||||||| ||||    
T  28086952 ttttgtgctttttgtgatttcgtcgtctaagtgctgcgttgtgttgttcgtcatctt 28086896  T

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Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 85 - 267
Target Start/End: Complemental strand, 9169514 - 9169330
Alignment:
Q  85 tttatcgaggaggg-tggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacat 181  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| || | | ||| ||||| |||  ||||||| ||  ||||||| |||||| |||||    
T  9169514 tttatcgaggaggggtggttttaggtcatttttgacctagaatcacccctctacatttttttttcccttttctttcaatctaaataagtggttttcacat 9169415  T
Q  182 atataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     ||| ||||||| | |||||||||||| ||||||||||| ||| |||| ||| ||||||||||||| ||||| | |||||||||||    
T  9169414 ctatcaagtttttccttttgtgttttt-gtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcgtcgtttgat 9169330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 43397364 - 43397205
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    ||||||||||||||||||||| |||||| ||||| |  | | |||||||||| | ||||||| ||  ||||||| |||||| ||||||||| |||||||     
T  43397364 gggtggttttaggtcattttttgacctagaatcacctctctacatctttttcccttttctttcaatctaaataagtggttttcacatatatcaagttttt 43397265  T
Q  195 cattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
      ||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||    
T  43397264 tcttttgtgttttttcgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtctt 43397205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 7448093 - 7448275
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| |||||||||||||||||| | |||| ||||| || | | |||||||||| ||||| |||| ||  ||||||| |||||| ||||| ||    
T  7448093 atcgaggaggggtggttttaggtcattttttgtcctagaatcacccctctacatctttttccccttttctttcaatctaaataaatggttttcacatcta 7448192  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | ||||||| | |||||||||||||||||||||||  ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  7448193 tcaagtttttccttttgtgttttttgtgatttcgttgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 7448275  T

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Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 267
Target Start/End: Original strand, 38445022 - 38445194
Alignment:
Q  97 ggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctccttt--ctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    |||||||||||||||||||||| ||| ||||| || | | |||||||||  |||||  |||| ||  ||||||| |||||| ||||| ||| |||||||     
T  38445022 ggtggttttaggtcatttttgatctagaatcacccctctacatcttttttccctttttctttcaatataaataagtggttttcacatctatcaagttttt 38445121  T
Q  195 cattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
      |||||||||||||||||||||||| ||| ||||  || ||||||||||||||||||| | || ||||||||    
T  38445122 tcttttgtgttttttgtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcgtttgat 38445194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 4041792 - 4041666
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgt 240  Q
    |||||| | ||||||| ||  ||||||| |||||| ||||| ||| ||||||| | |||||||||||||||||||||||| ||| |||| | | ||||||    
T  4041792 tttttcccgtttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttttgtgatttcgtcttctaagtgcgtcgttgtgt 4041693  T
Q  241 tgttcgtcgtcttatacgtcgtttgat 267  Q
    ||||||||||||| |||| ||||||||    
T  4041692 tgttcgtcgtcttgtacggcgtttgat 4041666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 4778598 - 4778767
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| || | | ||||||||| |||  ||||||| || |||||||| |||||| ||||| |    
T  4778598 atcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttttcccttttctttcaatttaaataagtggttttcacatct 4778697  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    || ||||||| |  |||||||||||| |||||||||| | | |||| ||| ||||||| |||||||||||    
T  4778698 atcaagtttttccctttgtgttttttttgatttcgtcgtttaagtgcggcgttgtgttattcgtcgtctt 4778767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 148 - 253
Target Start/End: Original strand, 4264381 - 4264486
Alignment:
Q  148 cctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgt 247  Q
    ||||||||| || |||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||| || ||||| |   ||| |||||||||    
T  4264381 cctttcttttaatttaaataagtggttttcacatatatcaagtttttcattttgtgttttttgtgatttcgtcgtcggagtgagatgttgcgttgttcgt 4264480  T
Q  248 cgtctt 253  Q
    ||||||    
T  4264481 cgtctt 4264486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 4904322 - 4904217
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||||||||| |||||||   |||||||||||||||||||||||| ||  |||||||| ||||||||||||||||||| | || ||    
T  4904322 taaataagtggttttcacatatatcaagttttttcttttgtgttttttgtgatttcgtcgtcaaagtgtggcgttgtgttgttcgtcgtcttgtgcgacg 4904223  T
Q  262 tttgat 267  Q
    ||||||    
T  4904222 tttgat 4904217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 267
Target Start/End: Original strand, 4098956 - 4099131
Alignment:
Q  95 agggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagtt 191  Q
    ||||||| |||||||||||||| |||||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||||| ||| |||||    
T  4098956 agggtggctttaggtcattttttgacctagaatcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtt 4099055  T
Q  192 ttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || | ||||||||||||||| |||||||| ||| |||| ||| ||||||||||||| ||||| | || ||||||||    
T  4099056 tttccttttgtgttttttgtaatttcgtcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgtttgat 4099131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 32448875 - 32448707
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatt-tttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| || | |||||||||||| |||||||||  |  ||||||| || ||| |||  ||||    
T  32448875 atcgaggaggggtggttttaggtcattatttgacctaaaatcacccctctgcatctttttcccctttctttcgatctaaataagtgattttcaccaatat 32448776  T
Q  186 aaagttttccattttgtg-ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     |||  ||  |||||||| ||||||||||||||||| ||| |||| | | |||||||||||||||||||    
T  32448775 caagcgttttattttgtgtttttttgtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtctt 32448707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 18107980 - 18107850
Alignment:
Q  97 ggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    |||||||||||||||||||| |||||| ||||| |  | |||||||||| | ||||||||| ||||||||||| |||||| |||| |||| || |||||     
T  18107980 ggtggttttaggtcattttttgacctagaatcacctctttgcatcttttacccctttctttcaaattaaataagtggttttcacacatatcaatttttc- 18107882  T
Q  196 attttgtgttttttgtgatttcgtcatctgagtg 229  Q
       |||||||||||||||||||||| ||||||||    
T  18107881 --attgtgttttttgtgatttcgtcgtctgagtg 18107850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 19062605 - 19062438
Alignment:
Q  88 atcgaggagggtggttttaggtcattttt-gacctaaaatcatccttatgcatc-tttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    |||||||||||||||||||||| |||||| || ||| ||||| || | | |||| |||||| | ||||||| ||  ||||||| |||||| ||||| |||    
T  19062605 atcgaggagggtggttttaggttattttttgaactagaatcacccctctacatcctttttcccttttctttcaatctaaataagtggttttcacatctat 19062506  T
Q  186 aaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     ||||||| | |||| ||||||||||||| ||||| ||| ||||  || |||||||||||||||||||    
T  19062505 caagtttttccttttatgttttttgtgatatcgtcgtctaagtgcagcgttgtgttgttcgtcgtctt 19062438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 7646317 - 7646501
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc---tttctttgaaattaaataattggtttccacata 182  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| || | | ||||||||| |||   |||||||  |  ||||||| |||||| |||||     
T  7646317 atcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttttccccttttctttcgatctaaataagtggttttcacatc 7646416  T
Q  183 tataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    ||  ||||||| | ||||||||||| |||||||||||| ||| |||| ||| || |||||||||||||||| | || ||||||||    
T  7646417 taccaagtttttccttttgtgttttctgtgatttcgtcgtctaagtgcggcgttatgttgttcgtcgtcttgtgcggcgtttgat 7646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 267
Target Start/End: Complemental strand, 11985483 - 11985302
Alignment:
Q  89 tcgaggag-ggtggttttaggtcatttttga-cctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatat 185  Q
    |||||||| |||||||||| ||||||||| | |||| ||||| || | | || ||||||| ||||| |||| || |||||||| |||||| |||||||||    
T  11985483 tcgaggagtggtggttttaagtcattttttaacctagaatcacccctctacaactttttccccttttctttcaatttaaataagtggttttcacatatat 11985384  T
Q  186 aaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     |||||||   |||||||| ||||||||||||||| ||| |||| ||| |||||||||| || ||||| | || ||||||||    
T  11985383 caagttttttcttttgtgtgttttgtgatttcgtcgtctaagtgcggctttgtgttgtttgttgtcttgtgcggcgtttgat 11985302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 29173895 - 29173802
Alignment:
Q  163 aaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttata 256  Q
    |||||| |||||| ||||||| | | ||||| | |||||||||||||||||||||||| ||| |||| ||| ||||||||||| ||||||||||    
T  29173895 aaataagtggttttcacatatttcaggtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcatcgtcttata 29173802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 8893256 - 8893200
Alignment:
Q  199 ttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttat 255  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  8893256 ttgtgttttttgtgatttcgtcatttgagtgttgcgttgtgttgttcgtcgtcttat 8893200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 29279768 - 29279656
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgt 240  Q
    |||| ||| ||||||| ||  ||||||| |||||| ||||||||| ||||||| | |||||||||||||||||||||||| ||| | || ||| ||||||    
T  29279768 ttttcctcttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttttgtgatttcgtcgtctaattgcggcgttgtgt 29279669  T
Q  241 tgttcgtcgtctt 253  Q
    || | ||||||||    
T  29279668 tggtagtcgtctt 29279656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 7678123 - 7677945
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt------ctcc--tttctttgaaattaaataattggtttccacatatata 186  Q
    ||||||||||||||||||||| |||||| ||||| || | | |||||||||      ||||  ||||||| ||  ||||||| |||||| ||||| ||||    
T  7678123 gggtggttttaggtcattttttgacctagaatcacccctctacatctttttttttttctcccttttctttcaatctaaataagtggttttcacatctata 7678024  T
Q  187 aagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
      ||||| | ||||| |||||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  7678023 --gtttttccttttgagttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 7677945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 39311102 - 39310938
Alignment:
Q  88 atcgaggagggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatata 186  Q
    |||||| | |||| ||||||||||||||| |||||| ||||| || | | | ||||||| || |||  || |||  |||||| |||||| ||||| |||     
T  39311102 atcgagaatggtgattttaggtcattttttgacctagaatcacccatctacgtctttttttcattttctttaaa--aaataagtggttttcacatttatc 39311005  T
Q  187 aagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| | ||||| ||||||||||||||| |||||| |||||||  ||||||||||| |||||||    
T  39311004 aagtttttccttttgggttttttgtgatttcatcatctaagtgtggtgttgtgttgttcttcgtctt 39310938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 6359066 - 6358962
Alignment:
Q  150 tttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtc 248  Q
    ||||||| || |||||||| || |||| |||||||| |||||||    |||||||||||| ||||||| ||| |||||||||| | ||||||||||||||    
T  6359066 tttctttcaatttaaataagtgttttctacatatatcaagttttttcctttgtgttttttcgtgattttgtcgtctgagtgtgtcgttgtgttgttcgtc 6358967  T
Q  249 gtctt 253  Q
    |||||    
T  6358966 gtctt 6358962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 253
Target Start/End: Complemental strand, 12648169 - 12648009
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatcttttt-ctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||||||||||||| |||||| ||||| || |   ||||||||| ||| ||||||| ||  ||||||| || ||||||||||||| |||| ||    
T  12648169 gggtggttttaggtcattttttgacctagaatcacccctccacatcttttttctcttttctttcaatctaaataagtgatttccacatatatcaagtgtt 12648070  T
Q  194 ccattttgtgt-tttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
       |||||||| |||| |||||||| || ||| |||| ||  |||||||||||||||||||    
T  12648069 ttcttttgtgtattttcgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtctt 12648009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 28871959 - 28871871
Alignment:
Q  142 ttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttt-tgtgatttcgtcatctgagtg 229  Q
    ||||||||||||||| || |||||||| || ||| |||| |||| ||||||| |||||||||||||| |||||||||||  ||||||||    
T  28871959 ttttctcctttctttcaatttaaataagtgattttcacacatatcaagtttttcattttgtgtttttatgtgatttcgttgtctgagtg 28871871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 31128977 - 31128866
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgt 240  Q
    |||| ||| ||||||| ||  ||||||| |||||| ||||||||| ||||||| | |||||||| ||||||||||||||||| | | || ||| ||||||    
T  31128977 ttttcctcttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgt-ttttgtgatttcgtcatttaattgcggcgttgtgt 31128879  T
Q  241 tgttcgtcgtctt 253  Q
    |||| ||||||||    
T  31128878 tgttagtcgtctt 31128866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 8809137 - 8809294
Alignment:
Q  97 ggtggttttaggtcatttttgacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatatataaagttttc 194  Q
    ||||||||||| |||||||||||||||||||| || | | |||||||||  ||| ||||||| ||   |||||| ||| || ||||||||| |||||||     
T  8809137 ggtggttttagatcatttttgacctaaaatcacccctctacatcttttttcctcttttctttcaatcaaaataagtggcttgcacatatattaagttttt 8809236  T
Q  195 cattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | ||||||| ||||||| |||||||| ||| | || | | | |||||||| ||||||||    
T  8809237 ccttttgtg-tttttgtaatttcgtcgtctaattgcgacgtcgtgttgttagtcgtctt 8809294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 36943378 - 36943193
Alignment:
Q  88 atcgaggaggg-tggttttaggtcat-ttttgacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||| |||||||||| ||||| |  | | |||||||||  ||| ||||||| ||  ||||||| | |||| ||||| |    
T  36943378 atcgaggaggggtggttttaggtcattttttgacctagaatcaccactctacatcttttttcctcttttctttcaatctaaataagtagttttcacatct 36943279  T
Q  184 ataaagttttccatt--ttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || |||||||   ||  || | ||||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  36943278 atcaagttttttttttgtttttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 36943193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 12554358 - 12554272
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtc 248  Q
    |||||||  ||||| |||| |||| |||||||  ||||||||||||||||||||| ||| |||||||| ||| ||||||||| ||||    
T  12554358 taaataagaggttttcacacatatcaagtttttaattttgtgttttttgtgattttgtcgtctgagtgcggcgttgtgttgtccgtc 12554272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 16375869 - 16375960
Alignment:
Q  159 aattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtct 252  Q
    |||||||||| || ||| ||||||||| |||||||   | ||||||||||||||||||| || ||||| || ||||||||||||||| ||||||    
T  16375869 aattaaataaatgattttcacatatatcaagttttt--tcttgtgttttttgtgatttcatcgtctgaatgcggcattgtgttgttcatcgtct 16375960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 27097558 - 27097492
Alignment:
Q  187 aagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| | ||||||||||||| |||||||||| ||| |||| ||| |||||||||||||||||||    
T  27097558 aagtttttccttttgtgttttttctgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtctt 27097492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 18763313 - 18763496
Alignment:
Q  88 atcgaggag-ggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatata 184  Q
    ||||||||| |||||||||| ||||||||| |||||| ||||| || | | |||||||||  ||||| |||| ||  ||||||| |||||| |||||  |    
T  18763313 atcgaggagaggtggttttatgtcattttttgacctagaatcacccctctacatcttttttcccttttctttcaatctaaataagtggttttcacatg-a 18763411  T
Q  185 taaagttttccattttgtgtttt--ttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | ||||||||  |||||||||||  |||||||||| || ||| |||| ||  ||||||||||||||||||| | || ||||||||    
T  18763412 tcaagttttctcttttgtgttttttttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgat 18763496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 35220249 - 35220353
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| |||||| || |||||||   | |||||||||||||||||||||| ||| |||| |||||| |||||||| ||||||| | || ||    
T  35220249 taaataagtggttttcacataaatcaagtttttt-tcttgtgttttttgtgatttcgtcgtctaagtgcggcattatgttgttcatcgtcttgtgcggcg 35220347  T
Q  262 tttgat 267  Q
    ||||||    
T  35220348 tttgat 35220353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 28718192 - 28718104
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatata 184  Q
    |||||||||||||||||||||||| || |||||| | | |||||||||||  |||||||||  |  ||||||| || ||||||||||||    
T  28718192 gggtggttttaggtcatttttgacatagaatcattcatctgcatcttttttccctttctttcgacataaataactgatttccacatata 28718104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 248
Target Start/End: Original strand, 37994128 - 37994285
Alignment:
Q  95 agggtggttttaggtcatttttgacctaaaatcatccttatgcatctt-tttctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    |||||||||||||||||||||||||||| ||||| || | ||||| || |||| |||||||||  | |||||||| || ||| |||||| || |||| ||    
T  37994128 agggtggttttaggtcatttttgacctagaatcacccctctgcattttgtttcccctttctttcgatttaaataagtgattttcacatagatcaagtgtt 37994227  T
Q  194 ccattttgtgttt---tttgtgatttcgtcatctgagtgtggcattgtgttgttcgtc 248  Q
       || ||| |||   || ||||||||||  |||||||| ||| ||||||||||||||    
T  37994228 ttcttgtgtttttatcttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtc 37994285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 31210781 - 31210679
Alignment:
Q  165 ataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgttt 264  Q
    |||| |||||| ||||| ||| |||||||   ||||||||||||| |||||||||| ||| |||| ||| |||||||||| || ||||| | || |||||    
T  31210781 ataagtggttttcacatctatcaagttttttcttttgtgttttttatgatttcgtcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgttt 31210682  T
Q  265 gat 267  Q
    |||    
T  31210681 gat 31210679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 11833338 - 11833430
Alignment:
Q  96 gggtggttttaggtca-tttttgacctaaaatcatccttatgcatc--tttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    |||||||||||||||| |||||||| ||||||||| | | | ||||  |||||||| ||||||| || |||||||| |||||| |||||||||    
T  11833338 gggtggttttaggtcattttttgacttaaaatcattcctttacatctttttttctcttttctttcaatttaaataagtggttttcacatatat 11833430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 1421634 - 1421690
Alignment:
Q  197 ttttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||||||||||||||||||| ||| |||| ||  || ||||||||||||||||    
T  1421634 ttttgtgttttttgtgatttcgtcgtctaagtgcggtgttatgttgttcgtcgtctt 1421690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 253
Target Start/End: Original strand, 3308793 - 3308952
Alignment:
Q  96 gggtggttttaggtca-tttttgacctaaaatcatccttatgcatc-tttttctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||| |||||||||| ||||||||||| ||||| || | |||||| |||||| ||||| ||| ||  ||||||| || ||| |||||| || |||||||    
T  3308793 gggtgattttaggtcaatttttgacctagaatcacccctttgcatcttttttcccctttatttcaatctaaataagtgattttcacatacatcaagtttt 3308892  T
Q  194 ccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     | ||| ||||||||| ||||||||||| ||| |||| | | ||||||| || ||||||||    
T  3308893 tc-tttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttatttgtcgtctt 3308952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 10929626 - 10929685
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtt 263  Q
    ||||| ||||||||||| |||||||| ||  ||||||||||||||||||| |||| ||||    
T  10929626 tttttcgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgtt 10929685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 13014980 - 13014899
Alignment:
Q  135 tgcatctttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttc 217  Q
    ||||||||||| || ||||||| || |||||||| | ||||  ||| |||| ||||||| |||||||||||| ||||||||||    
T  13014980 tgcatctttttttc-tttctttcaatttaaataagttgtttttacacatatcaagtttttcattttgtgtttcttgtgatttc 13014899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 37876852 - 37876786
Alignment:
Q  88 atcgaggaggg-tggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctccttt 152  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||| |||| | |||||||||| |||||    
T  37876852 atcgaggaggggtggttttaggtcaatttttgacctagaatcacccttgtacatctttttccccttt 37876786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 14423224 - 14423336
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtg 239  Q
    |||||||| ||||||| ||  ||||||| ||| |||||||||||| ||||||| | || ||| ||||||  |||||||||||||| | |||| || | ||    
T  14423224 tttttctcatttctttcaatctaaataagtgggttccacatatatcaagtttttc-ttgtgttttttttcttgatttcgtcatcttaatgtgacaatatg 14423322  T
Q  240 ttgttcgtcgtctt 253  Q
    || |||||||||||    
T  14423323 ttattcgtcgtctt 14423336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 36691797 - 36691885
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgt 250  Q
    ||||||| ||||||| |||||||| |||||||   ||||||||||||| ||||||||||| ||| |||| ||| || |||||||| ||||    
T  36691797 taaataagtggtttc-acatatatcaagttttttcttttgtgttttttcgtgatttcgtcgtctaagtgcggcgttttgttgttcatcgt 36691885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 37416556 - 37416605
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatcttttt 145  Q
    ||||| |||||||||||||||| |||| |||||||||| ||||| |||||    
T  37416556 gggtgattttaggtcatttttgtcctagaatcatccttctgcatattttt 37416605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 14955368 - 14955476
Alignment:
Q  88 atcgaggaggg-tggttttaggtca-tttttgacctaaaatcatccttatgcatc-tttttctcctttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| || ||||| |||| ||||||||||| |||||||| | |||||| ||||||  |||||||| ||  ||||||| || |||||||||| |    
T  14955368 atcgaggaggggtgattttaagtcaatttttgacctagaatcatccctctgcatcttttttcctctttctttcaatctaaataagtgatttccacataca 14955467  T
Q  185 taaagtttt 193  Q
    | |||||||    
T  14955468 tcaagtttt 14955476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 13007063 - 13007246
Alignment:
Q  88 atcgaggag-ggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||| |||||||||||||||||||| |||||| ||||| || | | || ||||||  ||  ||||||| ||  ||||||| |||||| ||||| |    
T  13007063 atcgaggagaggtggttttaggtcattttttgacctagaatcacccctctacaccttttttcccattttctttcaatctaaataagtggttttcacatct 13007162  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || ||||||| | |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  13007163 atcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 13007246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 38597632 - 38597814
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcct-ttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| ||||||||||| |||||| |||||| ||||| || | | |||||||||  ||| |||||| || |||||||| || ||| ||||| ||    
T  38597632 atcgaggaggggtggttttaggttattttttgacctagaatcacccctctacatcttttttccctattctttcaatttaaataagtgattttcacatcta 38597731  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | ||||||| | ||||||| |||||||||||||||| ||| |||| ||| ||||||||||||||||||| | || ||||||||    
T  38597732 tcaagtttttccttttgtgctttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgat 38597814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 6216729 - 6216902
Alignment:
Q  88 atcgagga-gggtggttttaggtcatt-tttgacctaaaatcatccttatgcatct-ttttctccttt-----ctttgaaattaaataattggtttccac 179  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| | | ||| | ||||| |||||     |||| ||  ||||||| |||||| |||    
T  6216729 atcgaggatgggtggttttaggtcattctttgacctaaaatcatccatctacatttgttttcccctttgctttctttcaatctaaataagtggttttcac 6216828  T
Q  180 atatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||| ||||||| | |||||||||||||||||||||||| ||| | || ||| || ||||||||||||||||    
T  6216829 atatatcaagtttttccttttgtgttttttgtgatttcgtcgtctaaatgcggcgttatgttgttcgtcgtctt 6216902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 9113979 - 9113796
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatttttga-cctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| || ||||||||||||||| | |||| ||||| || | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||||| |    
T  9113979 atcgaggaggggtgattttaggtcattttttaacctagaatcacccctctacatcttttttcccattttcttttaatctaaataagtggttttcacatct 9113880  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || ||||||| | |||||||||||||||||||||||| ||| |||| ||| || |||||||||||||||| | || ||||||||    
T  9113879 atcaagtttttccttttgtgttttttgtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcggcgtttgat 9113796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 11977134 - 11977006
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt--gtgatttcgtcatctgagtgtggcattgt 238  Q
    |||||| | ||||||| ||  ||||||| |||||| ||||||||| |||||||   |||||||||||||  ||||||||||| ||| |||||||| ||||    
T  11977134 tttttcccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttttgtgatttcgtcgtctaagtgtggcgttgt 11977035  T
Q  239 gttgttcgtcgtcttatacgtcgtttgat 267  Q
     |||||||||||||| |||| ||||||||    
T  11977034 attgttcgtcgtcttgtacgacgtttgat 11977006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 267
Target Start/End: Complemental strand, 11074146 - 11073971
Alignment:
Q  94 gagggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagtt 191  Q
    |||||||||||||||| |||||||||||| |||||||  | | | ||||||| |||  ||||||| ||  ||||||| ||| || ||||| ||| |||||    
T  11074146 gagggtggttttaggttatttttgacctagaatcatcactctacgtctttttttcccttttcttttaatctaaataagtggctttcacatctatcaagtt 11074047  T
Q  192 ttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    || | |||||| ||||||||||||||||  ||| ||||  || |||| |||||||||||||| | || ||||||||    
T  11074046 tttccttttgtattttttgtgatttcgttgtctaagtgcagcgttgttttgttcgtcgtcttgtgcggcgtttgat 11073971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 6012383 - 6012209
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttt 192  Q
    ||||||||||||||||||||| ||| || ||||| || | | ||||||||| |||  ||||||| ||  ||||||| || ||| ||| | ||| ||||||    
T  6012383 gggtggttttaggtcattttttgacatagaatcacccctctacatctttttttcccttttctttcaatctaaataagtgtttttcacgtctatcaagttt 6012284  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | | ||||||||||||||||||||| || ||| |||| ||  ||||||||||||||||||| | || ||||||||    
T  6012283 ttccttttgtgttttttgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgat 6012209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 15571347 - 15571477
Alignment:
Q  112 tttttgacctaaaatcatccttatgcatcttttt-ctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttg 210  Q
    ||||||||||| |||||||| |   ||||||||| ||| ||||||| ||  ||||||| |||||| ||||||||| ||||||| | ||||||  ||||||    
T  15571347 tttttgacctagaatcatccatcaacatcttttttctcatttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtaatttttg 15571446  T
Q  211 tgatttcgtcatctgagtgtggcattgtgtt 241  Q
    |||||||||| ||| |||||||| |||||||    
T  15571447 tgatttcgtcgtctaagtgtggcgttgtgtt 15571477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 8096738 - 8096588
Alignment:
Q  99 tggttttaggtcatttttgacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagttttccat 197  Q
    |||||||||||||||||||||||| ||||| || | |   |||||||  ||||| |||| ||  ||||||| |||||| ||||||||| |||||||   |    
T  8096738 tggttttaggtcatttttgacctagaatcacccctctatttcttttttcccttttctttcaatctaaataagtggttttcacatatatcaagttttttct 8096639  T
Q  198 tttgtgttttt-tgtgatttcgtcatctgagtgtggcattgtgttgttcgt 247  Q
    ||||||||||| ||||||||| || ||| |||| ||| |||||||||||||    
T  8096638 tttgtgtttttgtgtgatttcatcgtctaagtgcggcgttgtgttgttcgt 8096588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 2979566 - 2979398
Alignment:
Q  88 atcgaggaggg-tggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctc-ctttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| || |||||||||| ||||||||||| ||||| || | |||||||||||  | |||||||| ||  ||||||| || ||| |||||| |    
T  2979566 atcgaggaggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctttctttcaatctaaataagtgattttcacataca 2979467  T
Q  185 taaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | ||||||| | ||| ||||||||| ||||||||||| ||| |||| | | |||||||||||||||||||    
T  2979466 tcaagtttttc-tttcgtgttttttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctt 2979398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 38007192 - 38007375
Alignment:
Q  88 atcgaggaggg-tggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||||| ||||||||||||| ||||||||||  ||||| || | | |||||||||| | ||||||| || |||||||| |||||| |||| ||||    
T  38007192 atcgaggaggggtggttttaggtcattttttgacctcgaatcacccctctacatctttttcccttttctttcaatttaaataagtggttttcacacatat 38007291  T
Q  186 aaagttttccattttgt--gttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
     |||||||   |||| |   ||||||||||||||||| ||| |||  | ||||||| ||||| ||||||| | || ||||||||    
T  38007292 caagttttttgtttttttgtttttttgtgatttcgtcgtctaagtacgacattgtgctgttcatcgtcttgtgcggcgtttgat 38007375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 14082507 - 14082444
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    |||||||||||||| || ||| |||||||| ||||||||||||||||||| |||| ||||||||    
T  14082507 ttttttgtgatttcatcgtctaagtgtggcgttgtgttgttcgtcgtcttgtacggcgtttgat 14082444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 14211068 - 14211223
Alignment:
Q  88 atcgaggagggtggttttaggtc-atttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatata 186  Q
    ||||||||||||| ||||||||| |||||||||||| ||||| || | |||||||||||| ||||||||| ||  ||||||| || ||| |||||| ||     
T  14211068 atcgaggagggtgattttaggtcaatttttgacctagaatcacccctctgcatctttttc-cctttctttcaatctaaataagtgattttcacatacatc 14211166  T
Q  187 aagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    |||||||          | ||| ||||||||||| ||| |||| | |||||||||||||||||||||    
T  14211167 aagtttt----------tatttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtctt 14211223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 41630341 - 41630470
Alignment:
Q  88 atcgaggagggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatataa 187  Q
    ||||| || |||||||||||||||||||||||||| ||||| |  | | |||||||||| | ||||||| ||  |||||||   |||| ||||| |||||    
T  41630341 atcgaagatggtggttttaggtcatttttgacctagaatca-ctctctacatctttttcccatttctttcaatctaaataagccgttttcacatctataa 41630439  T
Q  188 agttttccattttgtgttttttgtgatttcg 218  Q
    |||||| | ||||||  ||||||||||||||    
T  41630440 agtttttctttttgtagtttttgtgatttcg 41630470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 26825343 - 26825447
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||| | ||| ||||||| | ||||||||||| |||||||||||| ||| |||| ||| |||||||||||||| |||| | || ||    
T  26825343 taaataagtggttttcacgtctatcaagtttttccttttgtgtttt-tgtgatttcgtcttctaagtgcggcgttgtgttgttcgtcttcttgtgcggcg 26825441  T
Q  262 tttgat 267  Q
    ||||||    
T  26825442 tttgat 26825447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 34945268 - 34945391
Alignment:
Q  99 tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttttcc 195  Q
    |||||||||||||||||| |||||| ||||| |||| | |||||||||  ||  ||||||| ||  ||||||| |||||| ||||| ||| ||||||| |    
T  34945268 tggttttaggtcattttttgacctagaatcacccttctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttc 34945367  T
Q  196 attttgtgttttttgtgatttcgtc 220  Q
     ||||||| ||||||||||||||||    
T  34945368 cttttgtg-tttttgtgatttcgtc 34945391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 25980070 - 25980161
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||| ||||||  |||| |||  |||||| | ||||||| |||||||| ||||||| ||| |||| || ||||||||||||||||||||    
T  25980070 taaataagtggttttaacatctatcgagtttttccttttgtggtttttgtggtttcgtcgtctaagtgcggtattgtgttgttcgtcgtctt 25980161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 233
Target Start/End: Complemental strand, 26878332 - 26878186
Alignment:
Q  88 atcgaggag-ggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||| |||||||||| ||||||||||| ||| ||||| |  | | |||||||||| ||  ||||||| ||  ||||||| |||||| |||||| |    
T  26878332 atcgaggagaggtggttttatgtcatttttgatctagaatcacctctctacatctttttcccccttttctttcaatctaaataagtggttttcacataaa 26878233  T
Q  185 taaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggc 233  Q
    | |||||||   ||||||  |||||||||||||||| ||| ||||||||    
T  26878232 tcaagttttttcttttgt--tttttgtgatttcgtcgtctaagtgtggc 26878186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 24229918 - 24229869
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||||||||||||||||| |||| ||| || ||||||||||||||||    
T  24229918 ttttttgtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtctt 24229869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 39567130 - 39567298
Alignment:
Q  88 atcgaggaggg-tggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctcc-tttctttgaaattaaataattggtttccacatata 184  Q
    ||||||||||| || |||||||||| ||||||||||| |||||  | | |||||||||||| || ||||||| ||  ||||||| || ||| |||||| |    
T  39567130 atcgaggaggggtgattttaggtcaatttttgacctagaatcacgcctctgcatctttttccccctttctttcaatctaaataagtgattttcacataca 39567229  T
Q  185 taaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | ||||||| | ||| ||||||||| ||||| ||||| ||| |||| | | ||||||||||||| |||||    
T  39567230 tcaagtttttc-tttcgtgttttttcgtgatctcgtcgtcttagtgcgacgttgtgttgttcgttgtctt 39567298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 19983457 - 19983415
Alignment:
Q  207 tttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcg 249  Q
    |||||||||||||||| ||||||||||  ||||||||||||||    
T  19983457 tttgtgatttcgtcatatgagtgtggcgctgtgttgttcgtcg 19983415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 28386865 - 28386934
Alignment:
Q  177 cacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcg 249  Q
    ||||||||| |||||||   |||| | ||||||||||||||||| ||| |||| ||| |||||||||||||||    
T  28386865 cacatatatcaagtttt---tttttttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcg 28386934  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 7036071 - 7036163
Alignment:
Q  96 gggtggttttaggtca-tttttgacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatatat 185  Q
    |||||||||||||||| |||||||||||||||||  | | | |||||||||  ||| ||||||| ||  ||||||| |||||| |||||||||    
T  7036071 gggtggttttaggtcattttttgacctaaaatcactcatctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatat 7036163  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 14726595 - 14726546
Alignment:
Q  204 ttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    ||||||||||||||||| ||| |||| ||  |||||||||||||||||||    
T  14726595 ttttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtctt 14726546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 28541110 - 28540998
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtg 239  Q
    |||||| ||||||||| ||  ||||||| || ||| |||||| || ||||||| | ||| ||||||||| |||||||| || ||| |||| | | |||||    
T  28541110 tttttcccctttctttcaatctaaataagtgattttcacatacatcaagtttttc-tttcgtgttttttcgtgatttcatcgtcttagtgcgacgttgtg 28541012  T
Q  240 ttgttcgtcgtctt 253  Q
    ||||||||||||||    
T  28541011 ttgttcgtcgtctt 28540998  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 11767683 - 11767735
Alignment:
Q  97 ggtggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctc 148  Q
    ||||||||||||||| |||||||||||||||||||  | | ||||||||||||    
T  11767683 ggtggttttaggtcaatttttgacctaaaatcatctgtcttcatctttttctc 11767735  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 11867524 - 11867556
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatca 128  Q
    |||| ||||||||||||||||||||||||||||    
T  11867524 gggtagttttaggtcatttttgacctaaaatca 11867556  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 15570887 - 15570935
Alignment:
Q  207 tttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttat 255  Q
    ||||||||||||||| | ||||||||   ||||||||||||||||||||    
T  15570887 tttgtgatttcgtcacccgagtgtggtggtgtgttgttcgtcgtcttat 15570935  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 35850616 - 35850660
Alignment:
Q  85 tttatcgaggaggg-tggttttaggtcatttttgacctaaaatca 128  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||    
T  35850616 tttatcgaggaggggtggttttaggtcttttttgacctagaatca 35850660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 253
Target Start/End: Original strand, 15336 - 15495
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||||||||||||| |||||| ||||| || | | |||||||||| ||||| |||| ||  ||||||| |||||| || || | | |||||||    
T  15336 gggtggttttaggtcattttttgacctagaatcacccctctacatctttttccccttttctttcaatctaaataagtggttttcatatctttcaagtttt 15435  T
Q  194 ccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
     | |||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||    
T  15436 tccttttgtgttttttgtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtctt 15495  T

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Target: scaffold0026 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 253
Target Start/End: Complemental strand, 72118 - 71949
Alignment:
Q  88 atcgaggaggg-tggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatat 183  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| | || | |||||||||| ||  ||||||| ||   |||||| |||||| ||||| |    
T  72118 atcgaggaggggtggttttaggtcattttttgacctagaatcaccattcttcatctttttcccccttttctttcaatccaaataagtggttttcacatct 72019  T
Q  184 ataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    || ||||||| |  ||||||||||||||||||||||| ||| |||| ||| ||||||||||||| |||||    
T  72018 atcaagtttttccatttgtgttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgttgtctt 71949  T

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Target: scaffold0009 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 96 - 250
Target Start/End: Complemental strand, 58324 - 58167
Alignment:
Q  96 gggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    ||||||||||||||||||||| |||||||||||| || | |||||| |||| |||||| |||| ||  ||||||| || ||||||||||||| |||| ||    
T  58324 gggtggttttaggtcattttttgacctaaaatcacccctctgcatccttttttccttttctttcaatctaaataagtgatttccacatatatcaagtgtt 58225  T
Q  194 ccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgt 250  Q
       ||||||| ||||| |||||||| || |||||||| ||| ||||||||||||||||    
T  58224 ttcttttgtgctttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgt 58167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 85 - 267
Target Start/End: Complemental strand, 33005 - 32818
Alignment:
Q  85 tttatcgaggagg-gtggttttaggtcattttt-gacctaaaatcatccttatgcatctttt-tctccttt-ctttgaaattaaataattggtttccaca 180  Q
    ||||||||||||| ||||||||||||||||||| ||| || ||||| || | | |||||||| || ||||| |||| ||  ||||||| |||||| ||||    
T  33005 tttatcgaggaggagtggttttaggtcattttttgacatagaatcacccctctacatcttttgtccccttttctttcaatctaaataagtggttttcaca 32906  T
Q  181 tatataaagttttccattttgtgtttttt-gtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcgtttgat 267  Q
    | ||| ||||||| | ||||||||||||| ||||||||||| ||| |||| ||| || |||||||||||||||| | || ||||||||    
T  32905 tctatcaagtttttccttttgtgtttttttgtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtttgat 32818  T

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Target: scaffold0445 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 1179 - 1348
Alignment:
Q  88 atcgaggag-ggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttccacatata 184  Q
    ||||||||| |||||||||||||||||||| |||||| ||||| || | | | |||||||  ||||| |||| |   ||||||| |||||| ||||||||    
T  1179 atcgaggagaggtggttttaggtcattttttgacctagaatcacccctctacttcttttttcccttttctttcactctaaataagtggttttcacatata 1278  T
Q  185 taaagttttccattttgtgtttt-ttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
    | ||||||||  ||||||||||| |||||||||| || ||| |||| ||| |||||||||||||||||||    
T  1279 tcaagttttctcttttgtgtttttttgtgatttcttcgtctaagtgcggcgttgtgttgttcgtcgtctt 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 244
Target Start/End: Original strand, 50630 - 50781
Alignment:
Q  96 gggtggttttaggtca-tttttgacctaaaatcatccttatgcatctttttctcc--tttctttgaaattaaataattggtttccacatatataaagttt 192  Q
    ||||| |||||||||| ||||||||||| |||||||| | | |||||||||  ||  ||||||| ||  ||||||| |||||| ||||| ||| ||||||    
T  50630 gggtgattttaggtcactttttgacctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagttt 50729  T
Q  193 tccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgtt 244  Q
    | | |||||||||||| ||||||||||| ||| |||| ||| ||||||||||    
T  50730 ttccttttgtgtttttcgtgatttcgtcgtctaagtgcggcgttgtgttgtt 50781  T

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Target: scaffold0136 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 10217 - 10113
Alignment:
Q  162 taaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttatacgtcg 261  Q
    ||||||| |||||| ||||||||| ||||||| | |||||||||||| ||||||||||| ||| |||| ||| |||| |||||||||||||| | || ||    
T  10217 taaataagtggttttcacatatatcaagtttttccttttgtgttttt-gtgatttcgtcgtctaagtgcggctttgttttgttcgtcgtcttgtgcggcg 10119  T
Q  262 tttgat 267  Q
    ||||||    
T  10118 tttgat 10113  T

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Target: scaffold0136; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 37938 - 38040
Alignment:
Q  141 tttttctcctttctttgaaattaaataattggtttccacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgt 240  Q
    |||||| ||||||||| ||  ||||||| |||||| ||||||| | ||||||| | ||||||||||||| | |||||||||||| |||| ||||||||||    
T  37938 tttttcccctttctttcaatctaaataagtggttttcacatatgtcaagtttttccttttgtgtttttt-ttatttcgtcatctaagtgcggcattgtgt 38036  T
Q  241 tgtt 244  Q
    ||||    
T  38037 tgtt 38040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 253
Target Start/End: Original strand, 8349 - 8516
Alignment:
Q  88 atcgaggaggg-tggttttaggtcatttt-tgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||||| |||||||| || ||||| ||||||| ||||| || | | || |||||| || ||||||| ||  ||||||| ||||||  ||||||||    
T  8349 atcgaggaggggtggttttaagttattttttgacctataatcacccctctacacctttttttcttttcttttaagctaaataagtggtttttacatatat 8448  T
Q  186 aaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtctt 253  Q
      ||||||   ||||||| |||||||||||||||||||| |||| ||| |||| |||||| |||||||    
T  8449 ccagtttttgcttttgtgatttttgtgatttcgtcatctaagtgcggcgttgtattgttcatcgtctt 8516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 2056 - 1931
Alignment:
Q  102 ttttaggtcatttttgacctaaaatcatccttatgcatcttttt--ctcctttctttgaaattaaataattggtttccacatatataaagttttccattt 199  Q
    ||||||||| ||||| |||||||||||  | | | |||||||||  ||| ||||||| || |||||||| |||||| ||||||||| ||||||| | |||    
T  2056 ttttaggtctttttttacctaaaatcactcatctacatcttttttcctcttttctttcaatttaaataagtggtttgcacatatatcaagtttttccttt 1957  T
Q  200 tgtgttttttgtgatttcgtcatctga 226  Q
    ||||| ||||||||||||||| |||||    
T  1956 tgtgt-ttttgtgatttcgtcgtctga 1931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 12743 - 12897
Alignment:
Q  80 tttgatttatcgaggag-ggtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctccttt-ctttgaaattaaataattggtttc 176  Q
    ||||||| ||| ||||| |||||||||||||||||||| |||||| ||||| |  ||| ||| |||||||||||| || | || |||||||| ||||||     
T  12743 tttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttctatcaatttaaataagtggtttt 12842  T
Q  177 cacatatataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtg 231  Q
    |||||| || |||| || | |||||||||||| ||||||| ||| ||| ||||||    
T  12843 cacatacatcaagtgtttcgttttgtgtttttcgtgattttgtcgtctaagtgtg 12897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 71527 - 71438
Alignment:
Q  96 gggtggttttaggtcatttttgacctaaaatcatccttatgcatctttttctcctttctttgaaattaaataattggtttccacatatat 185  Q
    ||||||||||||||||||||||||||||||||| || | | ||| |||| ||| ||||||| ||  |||| || |||||| |||||||||    
T  71527 gggtggttttaggtcatttttgacctaaaatcacccctctacatattttcctcttttctttcaatctaaacaagtggttttcacatatat 71438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 255
Target Start/End: Complemental strand, 2226 - 2056
Alignment:
Q  88 atcgaggagg-gtggttttaggtcattttt-gacctaaaatcatccttatgcatctttttctcc---tttctttgaaattaaataattggtttccacata 182  Q
    |||||||||| ||||||||| ||||||||| || ||| ||||| || | | |||||||||  ||   ||||||| ||  ||||||| ||||||| ||||     
T  2226 atcgaggaggagtggttttaagtcattttttgatctagaatcacccctctacatcttttttcccctttttctttcaatctaaataagtggtttc-acatc 2128  T
Q  183 tataaagttttccattttgtgttttttgtgatttcgtcatctgagtgtggcattgtgttgttcgtcgtcttat 255  Q
    ||| |||||||   |||||||||||| |||||||| || ||| |||| |||||| ||||||||||||||||||    
T  2127 tatcaagttttttcttttgtgttttt-gtgatttcatcgtctaagtgcggcattttgttgttcgtcgtcttat 2056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 92944 - 93043
Alignment:
Q  96 gggtggttttaggtcatttt-tgacctaaaatcatccttatgcatc-tttttctcctttctttgaaattaaataattggtttccacatatataaagtttt 193  Q
    |||||||||||||| ||||| ||||||| |||||||||  |||||| |||||||||||||||| ||  ||||||| || ||| | | ||||| |||||||    
T  92944 gggtggttttaggttattttttgacctagaatcatcctcgtgcatcttttttctcctttctttcaatctaaataagtgatttacgcttatatcaagtttt 93043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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