View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0367_high_15 (Length: 329)
Name: NF0367_high_15
Description: NF0367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0367_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 46 - 300
Target Start/End: Complemental strand, 54221526 - 54221272
Alignment:
| Q |
46 |
tcatagggtacaaattcttaagttaaattatcaagctcttcataagaatcaactcaagctcaactcttcatgtagatgccaattgcaaaagttcaatatt |
145 |
Q |
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| T |
54221526 |
tcatagggtacaaattcttaagttaaattatccagctcttcataagaatcaactcaaactcatctcttcatgtagatgccaattgcaaaagttcaatatt |
54221427 |
T |
|
| Q |
146 |
tagttcaaatgtagctccaggctgtaacaacataaacaaagttcaagaaccgcatggtgtaggtttgtcattttcgttgaagagaacaatatttttccta |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54221426 |
tagttcaaatgtagctccaggctgtaacaacataaacaaagttcaagaaccgcatggtgtaggtttgtcattttcgttgaagagaacaatatttttccta |
54221327 |
T |
|
| Q |
246 |
catattattgtccataacctatatctaatcaacaatgagtaaaaagtgaaatgta |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54221326 |
catattattgtccataacctatatctaatcaacaatgagtaaaaagtgaaatgta |
54221272 |
T |
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