View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0367_high_26 (Length: 250)
Name: NF0367_high_26
Description: NF0367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0367_high_26 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 30 - 250
Target Start/End: Complemental strand, 48090141 - 48089919
Alignment:
| Q |
30 |
cttagaatattttgaatgtaaacaaataaaaaatagcaatttatgattactaaacatttttgttttctgataattaatactatcaagccaaaaaa--cta |
127 |
Q |
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| T |
48090141 |
cttagaatattttgaatgtaaacaaataaaaaatagcaatttatgattactaaacatttttgttttctgataattaatactatcaagccaaaaaaaacta |
48090042 |
T |
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| Q |
128 |
aatagagattgagttacaagtgccttggaaatcaacagataactctatgacttttactccatagatcaggagaaagccttaaaacaaaccacttgaaact |
227 |
Q |
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|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| || |||||||||| | |||||||||||||||||| |
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| T |
48090041 |
aatagagattgagttacaagcgccttggaaatcaactgataactctatgacttttactccatagaccaagagaaagcctaagaacaaaccacttgaaact |
48089942 |
T |
|
| Q |
228 |
acgactcataagtatcaaaactc |
250 |
Q |
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| T |
48089941 |
acgactcataagtatcaaaactc |
48089919 |
T |
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