View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0367_low_29 (Length: 292)
Name: NF0367_low_29
Description: NF0367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0367_low_29 |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 4039243 - 4039004
Alignment:
| Q |
1 |
ttcatttcatcctccttgcagccattgttttcggttaaacacgattcaaaactactcgaaatgtaatcgaattgtgcagtgtcattgatcaattcattgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4039243 |
ttcatttcatcctccttgcagccattgttttcggttaaacacgattcaaaactactcgaaatgtaatcgaattgtgcagtgtcattgatcaattcattgt |
4039144 |
T |
|
| Q |
101 |
tgcttgtgctataatcctcatggtcattaaggaaatcagtgaactgatcaattgagaaatcttttgataattctccatatgcatccacttgttgttgcat |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
4039143 |
tgcttgtgctataatcctcatgatcattgaggaaatcagtgaattgatcaattgagaaatcttttgatacttctccatatgcatccacttgttgttgcat |
4039044 |
T |
|
| Q |
201 |
ctcctgacgatcctgatcattggctcgttgttgctcccta |
240 |
Q |
| |
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|||||||||||| ||||||||||||||||||||||||||| |
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| T |
4039043 |
ctcctgacgatcgtgatcattggctcgttgttgctcccta |
4039004 |
T |
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