View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0367_low_35 (Length: 274)
Name: NF0367_low_35
Description: NF0367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0367_low_35 |
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Alignment Details
Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 63 - 235
Target Start/End: Original strand, 12472907 - 12473081
Alignment:
| Q |
63 |
gaattagaaaagcaaccaataaaatattgtaaagaatatcctattcccattggtgtattccttccatgtgccactaaattcaagaggatccaaaacatcc |
162 |
Q |
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| T |
12472907 |
gaattagaaaagcaaccaataaaatattgtaaagaatatcccattcccattggtgtattccttccatgtgccactaaattcaagaggatccaaaacatcc |
12473006 |
T |
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| Q |
163 |
acatcccttttatagccctacacgctttctctcaaatgattctcattatttcta--ctctctatataaaccacat |
235 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |
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| T |
12473007 |
acatcccttttataaccctacacgctttctctcaaatgattctcattacttctagtctctctatataaaccacat |
12473081 |
T |
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