View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0370_high_30 (Length: 251)
Name: NF0370_high_30
Description: NF0370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0370_high_30 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 44410060 - 44410284
Alignment:
| Q |
29 |
acatctacaatgtaaacaaatgataagtatttcaatacgtggcaatattatatatatagcactcttttgcattatgattttccaatgtcacattgttata |
128 |
Q |
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| T |
44410060 |
acatctacaatgtaaacaaatgacaaatatttcaatacgtggcaatattatatatatagcactcttttgcattatgattttccaatgtcacattgttata |
44410159 |
T |
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| Q |
129 |
nnnnnnnnnnnnnnnnnnnnnnnaactc--tactataaaagcaatattaattgttaaagaccaccctaataaagcaaaatttcaaaatttcttatttcaa |
226 |
Q |
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||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
44410160 |
tttttcttttcttttctgattttaactctatactataaaagcaatattaattgttaaaggccaccctaataaagcaaaatttcaaaatttcttatttcaa |
44410259 |
T |
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| Q |
227 |
taaaatgaaattcaataaattccac |
251 |
Q |
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||||||||||||||||||||||||| |
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| T |
44410260 |
taaaatgaaattcaataaattccac |
44410284 |
T |
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