View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0370_low_10 (Length: 450)
Name: NF0370_low_10
Description: NF0370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0370_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 412; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 26 - 449
Target Start/End: Complemental strand, 38719319 - 38718896
Alignment:
| Q |
26 |
atccaaaacaaataactcatgcatagatcaatatgatcatgaaaaattaggaaacattctgaattctaatatgcatctgaataaaaactgatctcttaat |
125 |
Q |
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| T |
38719319 |
atccaaaaccaataactcatgcatagatcaatatgatcatgaaaaattaggaaccattctgaattctaatatgcatctgaataaaaactgatctcttaat |
38719220 |
T |
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| Q |
126 |
ggcaatcagatttaaaaatattaacactgcagaaatgaagaagtttaacaagcatgaagaaactagttgctattgtaagttgtgcagctttcatgcaata |
225 |
Q |
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| T |
38719219 |
ggcaatcagatttaaaaatattaacactgcagaaatgaagaagtttaacaagcatgaagaaactagtcgctattgtaagttgtgcagctttcatgcaata |
38719120 |
T |
|
| Q |
226 |
gcaaaacgaaaaagctgacattcgtagataataattgaacattgccagaacatttttgaactaaatgacattttaaggaaattatatcatagttaagagg |
325 |
Q |
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| T |
38719119 |
gcaaaacgaaaaagctgacattcgtagataataattgaacattgccagaacatttttgaactaaatgacattttaaggaaattatatcatagttaagagg |
38719020 |
T |
|
| Q |
326 |
gagggaagttggttgaatggttttagagtggaagagcttagaataattatattaaaatcactcatgtccaccaccacacaattcataaaacatatctttg |
425 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38719019 |
gagggaagttggttgaatggttttagagtggaagagcttagaataattatattaaaatcactcatgtccaccaccacacaattcataaaacatatctttg |
38718920 |
T |
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| Q |
426 |
aggtagctttatattcttcgacat |
449 |
Q |
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| T |
38718919 |
aggtagctttatattcttcgacat |
38718896 |
T |
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