View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0370_low_25 (Length: 292)
Name: NF0370_low_25
Description: NF0370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0370_low_25 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 10980255 - 10980431
Alignment:
| Q |
61 |
aaacaaaaatgacccaccactagaaagttcacataagaaacaatatttatggtggtacaggtaaaattactgtttcaacactgaacaataagtagacgtg |
160 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10980255 |
aaacaaaaatgacccaccactagaaagttcacataagaaacaatatttatggtggtacaggtaaaattactgtttcaacactgaacaataagtagacgtg |
10980354 |
T |
|
| Q |
161 |
aaggatgagaatggaggtagttggaaaaacagcgccagtgaacattaattaataacagtaccacagatagcaacagc |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10980355 |
aaggatgagaatggaggtagttggaaaaacagcgccagtgaacattaattaataacagtaccacagatagcaacagc |
10980431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 1095 times since January 2019
Visitors: 3075