View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0370_low_46 (Length: 203)

Name: NF0370_low_46
Description: NF0370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0370_low_46
NF0370_low_46
[»] chr2 (1 HSPs)
chr2 (1-38)||(37714963-37715000)


Alignment Details
Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37715000 - 37714963
Alignment:
1 tatagtcattattatcttaacatgtacggtggtgtttg 38  Q
    ||||||||||||||||||||||||||||||||||||||    
37715000 tatagtcattattatcttaacatgtacggtggtgtttg 37714963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1870 times since January 2019
Visitors: 3094