View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0372_high_6 (Length: 293)
Name: NF0372_high_6
Description: NF0372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0372_high_6 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 29 - 293
Target Start/End: Original strand, 41463051 - 41463315
Alignment:
| Q |
29 |
agaaatcatcttaataaataaataaacaagttggtagagtttcatgcatgaatatactctatatatactccatatatagatacaagcctgccatgaatca |
128 |
Q |
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| T |
41463051 |
agaaatcatcttaataaataaataaacaagttggtagagtttcatgcatgaatatactctatatatactccatatatagatacaagcctgccatgaatca |
41463150 |
T |
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| Q |
129 |
cacacatatcaccatttgctctctccttctatatacattttcctcatggaacatcccagcttatcattcttacccttccttttattttcaacaagtttca |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41463151 |
cacacatatcaccatttgctctctccttctatatacattttcctcatggaacatcccagcttatcattcttacccttccttttattttcaacaagtttca |
41463250 |
T |
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| Q |
229 |
ttcttttcctcacacaaattctaaaattggtaaaaagaatattaagagtcacaaccaaagtacaa |
293 |
Q |
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| T |
41463251 |
ttcttttcctcacacaaattctaaaattggtaaaaagaatattaagagtcacaaccaaagtacaa |
41463315 |
T |
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