View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0372_low_2 (Length: 542)

Name: NF0372_low_2
Description: NF0372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0372_low_2
NF0372_low_2
[»] chr6 (23 HSPs)
chr6 (300-415)||(34100656-34100771)
chr6 (94-241)||(34118983-34119128)
chr6 (94-241)||(34146142-34146287)
chr6 (94-241)||(34158758-34158903)
chr6 (232-305)||(34149770-34149843)
chr6 (232-305)||(34162386-34162459)
chr6 (165-265)||(34091807-34091911)
chr6 (96-280)||(34115496-34115682)
chr6 (118-291)||(34106625-34106795)
chr6 (96-241)||(34114493-34114631)
chr6 (434-480)||(34149515-34149561)
chr6 (434-480)||(34162131-34162177)
chr6 (231-413)||(34169498-34169674)
chr6 (109-195)||(28711036-28711118)
chr6 (94-241)||(34104817-34104959)
chr6 (109-184)||(34168325-34168396)
chr6 (434-515)||(34115282-34115363)
chr6 (434-478)||(34169426-34169470)
chr6 (434-477)||(34091594-34091637)
chr6 (434-495)||(34109301-34109362)
chr6 (436-477)||(34119957-34119998)
chr6 (436-468)||(34147127-34147159)
chr6 (436-468)||(34159743-34159775)
[»] chr4 (2 HSPs)
chr4 (118-195)||(38648625-38648698)
chr4 (152-197)||(48430875-48430920)
[»] scaffold0620 (2 HSPs)
scaffold0620 (165-265)||(7141-7245)
scaffold0620 (429-477)||(6928-6976)
[»] chr3 (1 HSPs)
chr3 (165-233)||(53287843-53287907)
[»] chr1 (2 HSPs)
chr1 (169-246)||(23618006-23618080)
chr1 (169-246)||(23649348-23649422)


Alignment Details
Target: chr6 (Bit Score: 116; Significance: 9e-59; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 34100771 - 34100656
Alignment:
Q  300 atatcagaatacaacatcttcgccaccgacttctgtgggtatgcaaattaatattaaaaagaactcaaatttagacaaagaaaataataaaaattgtttg 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34100771 atatcagaatacaacatcttcgccaccgacttctgtgggtatgcaaattaatattaaaaagaactcaaatttagacaaagaaaataataaaaattgtttg 34100672  T
Q  400 aatctaaagcattgtt 415  Q
    ||||||||||||||||    
T  34100671 aatctaaagcattgtt 34100656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 94 - 241
Target Start/End: Complemental strand, 34119128 - 34118983
Alignment:
Q  94 aacctcatctgttgatttagagggtaattaatattaaagaactcaaatatttatgaacaaag-aaattaatgttgtgaaacttgaatcaaaagcattgct 192  Q
    |||| ||| |||||||||||||  |||||||||||||||||||||||    ||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  34119128 aaccccatttgttgatttagagattaattaatattaaagaactcaaa----tatgaacaaagaaaattaaaattgtgaaacttgaatcaaaatcattgct 34119033  T
Q  193 aaatgtcggccccataaacttcgttaacatttccata-aaaacttgcctc 241  Q
    ||| |    |||||||||||| ||||||||||||| | ||||||||||||    
T  34119032 aaaggctaaccccataaactttgttaacatttccaaacaaaacttgcctc 34118983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 94 - 241
Target Start/End: Complemental strand, 34146287 - 34146142
Alignment:
Q  94 aacctcatctgttgatttagagggtaattaatattaaagaactcaaatatttatgaacaaag-aaattaatgttgtgaaacttgaatcaaaagcattgct 192  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||    ||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  34146287 aaccccatctgttgatttagagattaattaatattaaagaactcaaa----tatgaacaaagaaaattaaaattgtgaaacttgaatcaaaatcattgct 34146192  T
Q  193 aaatgtcggccccataaacttcgttaacatttccata-aaaacttgcctc 241  Q
    ||| |    || ||||||||| ||||||||||||| | ||||||||||||    
T  34146191 aaaggctaacctcataaactttgttaacatttccaaacaaaacttgcctc 34146142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 94 - 241
Target Start/End: Complemental strand, 34158903 - 34158758
Alignment:
Q  94 aacctcatctgttgatttagagggtaattaatattaaagaactcaaatatttatgaacaaag-aaattaatgttgtgaaacttgaatcaaaagcattgct 192  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||    ||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  34158903 aaccccatctgttgatttagagattaattaatattaaagaactcaaa----tatgaacaaagaaaattaaaattgtgaaacttgaatcaaaatcattgct 34158808  T
Q  193 aaatgtcggccccataaacttcgttaacatttccata-aaaacttgcctc 241  Q
    ||| |    || ||||||||| ||||||||||||| | ||||||||||||    
T  34158807 aaaggctaacctcataaactttgttaacatttccaaacaaaacttgcctc 34158758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 305
Target Start/End: Complemental strand, 34149843 - 34149770
Alignment:
Q  232 aacttgcctcagtttttatatcatatgcacactttgcatcattcatgcctctttcaattttagtaacgatatca 305  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| || ||||| ||||    
T  34149843 aacttgcctcagtttttatatcatacgcacactttgcatcattcatgcctcttcgaatttcagcaacgacatca 34149770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 305
Target Start/End: Complemental strand, 34162459 - 34162386
Alignment:
Q  232 aacttgcctcagtttttatatcatatgcacactttgcatcattcatgcctctttcaattttagtaacgatatca 305  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| || ||||| ||||    
T  34162459 aacttgcctcagtttttatatcatacgcacactttgcatcattcatgcctcttcgaatttcagcaacgacatca 34162386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 34091911 - 34091807
Alignment:
Q  165 ttgtgaaacttgaatcaaaagcattgctaaatgtcggcccc-ataaacttcgttaacatttcca---taaaaacttgcctcagtttttatatcatatgca 260  Q
    |||||||||||||||||||||||| | ||||||  |||||| ||||||||  |||| ||||| |   ||||||||||||||||||||||||||| | |||    
T  34091911 ttgtgaaacttgaatcaaaagcatcgataaatgatggcccccataaactttattaagatttcaacaataaaaacttgcctcagtttttatatcaaacgca 34091812  T
Q  261 cactt 265  Q
    |||||    
T  34091811 cactt 34091807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 96 - 280
Target Start/End: Complemental strand, 34115682 - 34115496
Alignment:
Q  96 cctcatctgttgatttagagggtaattaatattaaagaactcaaatatttatgaacaaagaaattaatgttgtgaaacttgaatcaaaagcattgctaaa 195  Q
    ||||||||  || |||||||| ||| |||||| || ||||||||    |||||||  |||||| |||  || | |||||| ||||||||||||||||||     
T  34115682 cctcatctactggtttagaggttaaataatatcaacgaactcaa----ttatgaatgaagaaactaaaattataaaacttaaatcaaaagcattgctaat 34115587  T
Q  196 tgtcggccccataaacttcgttaacatttcc------ataaaaacttgcctcagtttttatatcatatgcacactttgcatcattcatgcc 280  Q
     |||||  | |||||||| ||||||||||||      | |||||||||||||||| |||| |||||| |||||||| |||| |||||||||    
T  34115586 ggtcggaactataaactttgttaacatttccagaaaaagaaaaacttgcctcagtctttaaatcataggcacacttcgcattattcatgcc 34115496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 291
Target Start/End: Complemental strand, 34106795 - 34106625
Alignment:
Q  118 taattaatattaaagaactcaaatatttatgaacaaagaaattaatgttgtgaaacttgaatcaaaagcattgctaaatg-tcggccccataaacttcgt 216  Q
    |||||||||||| | |||||||||||    |||||| |||| |||  || ||||||||||||||||||||| | |||||| | | |||||||| |||  |    
T  34106795 taattaatattacataactcaaatat----gaacaaggaaactaaaattctgaaacttgaatcaaaagcatcgataaatgctagcccccataagctttat 34106700  T
Q  217 taacatttccataaaaacttgcctcagtttttatatcatatgcacactttgcatcattcatgcctctttcaattt 291  Q
    ||| ||||| | |||||||| |||| |||||||||||| | |||||||| || |  |||||||| |||| |||||    
T  34106699 taagatttcaaaaaaaacttacctcggtttttatatcaaacgcacacttcgcctttttcatgccgcttttaattt 34106625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 241
Target Start/End: Complemental strand, 34114631 - 34114493
Alignment:
Q  96 cctcatctgttgatttagagggtaattaatattaaagaactcaaatatttatgaacaaagaaattaatgttgtgaaacttgaatcaaaagcattgctaaa 195  Q
    |||||||| | | |||||| | ||||||||||| || |||||||     |||||||||||||| |||  |||||||||||||| ||||| |||| |||||    
T  34114631 cctcatctataggtttagaagttaattaatatttaaaaactcaa----ctatgaacaaagaaactaaaattgtgaaacttgaaacaaaaacattactaaa 34114536  T
Q  196 tgtcggccccataaacttcgttaacatttccataaaaacttgcctc 241  Q
     ||  |||| |||||||| ||||||||||||| |||||||||||||    
T  34114535 -gt--gccctataaactttgttaacatttccagaaaaacttgcctc 34114493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 34149561 - 34149515
Alignment:
Q  434 aaacttgccttggattttgcccaagatctccttttgggatatctcct 480  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  34149561 aaacttgccttggattttgccaaagatctccttttggggtatctcct 34149515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 434 - 480
Target Start/End: Complemental strand, 34162177 - 34162131
Alignment:
Q  434 aaacttgccttggattttgcccaagatctccttttgggatatctcct 480  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  34162177 aaacttgccttggattttgccaaagatctccttttggggtatctcct 34162131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 413
Target Start/End: Complemental strand, 34169674 - 34169498
Alignment:
Q  231 aaacttgcctcagtttttatatcatatgcacactttgcatcattcatgcctctttcaattttagtaacgatatcagaatacaacatcttcgccaccgact 330  Q
    |||| |||||||||||||| |||||||||||||||  |||  |||||||| |||| ||||| || || || | ||  ||  |||||||||||||||||||    
T  34169674 aaacatgcctcagtttttaaatcatatgcacacttcacatttttcatgccgctttgaatttcagcaatgacagcaacatgtaacatcttcgccaccgact 34169575  T
Q  331 tctgtgggtatgcaaattaatattaaaaagaactcaaatttagacaaagaaaataataaaaattgtttgaatctaaagcattg 413  Q
    ||||   ||||  | |||||| ||  ||||||||||||| | ||||||||    ||| ||| ||||||||||| |||||||||    
T  34169574 tctgctagtatagagattaatctt--aaagaactcaaatattgacaaaga----aattaaagttgtttgaatcaaaagcattg 34169498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 28711118 - 28711036
Alignment:
Q  109 tttagagggtaattaatattaaagaactcaaatatttatgaacaaagaaattaatgttgtgaaacttgaatcaaaagcattgctaaa 195  Q
    |||||||| |||||||||||||||||||||||    ||||||||| |||| ||    |||||||||||||||||||| |||||||||    
T  28711118 tttagaggttaattaatattaaagaactcaaa----tatgaacaaggaaactagaagtgtgaaacttgaatcaaaagtattgctaaa 28711036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 241
Target Start/End: Complemental strand, 34104959 - 34104817
Alignment:
Q  94 aacctcatctgttgatttagagggtaattaatattaaagaactcaaatatttatgaacaaagaaattaatgttgtgaaacttgaatcaaaagcattgcta 193  Q
    |||| ||||| || ||||||||  || ||| |||||||||||||||||||    ||||||| |||| ||  ||||||||||| |||||||| ||||||||    
T  34104959 aaccgcatctattaatttagagattagttagtattaaagaactcaaatat----gaacaaaaaaatcaaaattgtgaaactttaatcaaaatcattgcta 34104864  T
Q  194 aatgtcggccccataaacttcgttaacatttccata-aaaacttgcctc 241  Q
    || |   ||||||||||||  |||||||| |||| | ||||||||||||    
T  34104863 aaggctagccccataaact--gttaacatatccaaagaaaacttgcctc 34104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 34168396 - 34168325
Alignment:
Q  109 tttagagggtaattaatattaaagaactcaaatatttatgaacaaagaaattaatgttgtgaaacttgaatcaaaa 184  Q
    |||||||| ||||||||| |||||| |||||||||    ||||||||||| |||  ||||||||||||||||||||    
T  34168396 tttagaggttaattaataataaagagctcaaatat----gaacaaagaaactaaaattgtgaaacttgaatcaaaa 34168325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 434 - 515
Target Start/End: Complemental strand, 34115363 - 34115282
Alignment:
Q  434 aaacttgccttggattttgcccaagatctccttttgggatatctccttctttcggagtatctcataaaattgattcattcat 515  Q
    ||||||||||||||||||||| ||||||||||| |||| ||| | || | || ||||||||||  |||||||| | ||||||    
T  34115363 aaacttgccttggattttgccaaagatctccttctggggtatttactccgtttggagtatctccaaaaattgaatgattcat 34115282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 478
Target Start/End: Complemental strand, 34169470 - 34169426
Alignment:
Q  434 aaacttgccttggattttgcccaagatctccttttgggatatctc 478  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||    
T  34169470 aaacttaccttggattttgccaaagatctccttttggggtatctc 34169426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 477
Target Start/End: Complemental strand, 34091637 - 34091594
Alignment:
Q  434 aaacttgccttggattttgcccaagatctccttttgggatatct 477  Q
    |||||||||||||||||| |||||||||||||||| || |||||    
T  34091637 aaacttgccttggattttacccaagatctccttttcgggtatct 34091594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 34109362 - 34109301
Alignment:
Q  434 aaacttgccttggattttgcccaagatctccttttgggatatctccttctttcggagtatct 495  Q
    ||||||||||| |||||| |||||||||||||||| || ||||| || |||| || ||||||    
T  34109362 aaacttgccttagattttacccaagatctccttttcgggtatctactccttttggggtatct 34109301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Complemental strand, 34119998 - 34119957
Alignment:
Q  436 acttgccttggattttgcccaagatctccttttgggatatct 477  Q
    |||||||||||||||| |||||||||||||||| || |||||    
T  34119998 acttgccttggattttacccaagatctcctttttgggtatct 34119957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 468
Target Start/End: Complemental strand, 34147159 - 34147127
Alignment:
Q  436 acttgccttggattttgcccaagatctcctttt 468  Q
    |||||||||||||||| ||||||||||||||||    
T  34147159 acttgccttggattttacccaagatctcctttt 34147127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 468
Target Start/End: Complemental strand, 34159775 - 34159743
Alignment:
Q  436 acttgccttggattttgcccaagatctcctttt 468  Q
    |||||||||||||||| ||||||||||||||||    
T  34159775 acttgccttggattttacccaagatctcctttt 34159743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 38648625 - 38648698
Alignment:
Q  118 taattaatattaaagaactcaaatatttatgaacaaagaaattaatgttgtgaaacttgaatcaaaagcattgctaaa 195  Q
    ||||||||||||||||| ||||||||    ||||||||||| |||  |||||||||||||||||||||||||||||||    
T  38648625 taattaatattaaagaattcaaatat----gaacaaagaaactaaaattgtgaaacttgaatcaaaagcattgctaaa 38648698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 48430875 - 48430920
Alignment:
Q  152 aaagaaattaatgttgtgaaacttgaatcaaaagcattgctaaatg 197  Q
    ||||||| |||  ||||||||||||||||||||||||||| |||||    
T  48430875 aaagaaactaaaattgtgaaacttgaatcaaaagcattgccaaatg 48430920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 7245 - 7141
Alignment:
Q  165 ttgtgaaacttgaatcaaaagcattgctaaatgtcggcccc-ataaacttcgttaacatttcca---taaaaacttgcctcagtttttatatcatatgca 260  Q
    |||||||||||||||||||||||| | ||||||  |||||| ||||||||  |||| ||||| |   ||||||||||||||||||||||||||| | |||    
T  7245 ttgtgaaacttgaatcaaaagcatcgataaatgctggcccccataaactttattaagatttcaacaataaaaacttgcctcagtttttatatcaaacgca 7146  T
Q  261 cactt 265  Q
    |||||    
T  7145 cactt 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 477
Target Start/End: Complemental strand, 6976 - 6928
Alignment:
Q  429 caaagaaacttgccttggattttgcccaagatctccttttgggatatct 477  Q
    |||| |||||||||||||||||| |||||||||||||||| || |||||    
T  6976 caaaaaaacttgccttggattttacccaagatctccttttcgggtatct 6928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 53287907 - 53287843
Alignment:
Q  165 ttgtgaaacttgaatcaaaagcattgctaaatgtcggccccataaacttcgttaacatttccataaaaa 233  Q
    |||||||||| |||||||||||||||||||    ||||||||||||||| | |||||||| || |||||    
T  53287907 ttgtgaaactagaatcaaaagcattgctaa----cggccccataaactttggtaacatttgcagaaaaa 53287843  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 23618006 - 23618080
Alignment:
Q  169 gaaacttgaatcaaaagcattgctaaatgtcggccccataaacttcgttaacattt-ccataaaaacttgcctcagttt 246  Q
    |||||||||||||||||||||||||||    |||| ||||||||| | |||||||| | | |||||||||||| |||||    
T  23618006 gaaacttgaatcaaaagcattgctaaa----ggcctcataaactttggtaacatttgcaaaaaaaacttgcctgagttt 23618080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 23649348 - 23649422
Alignment:
Q  169 gaaacttgaatcaaaagcattgctaaatgtcggccccataaacttcgttaacattt-ccataaaaacttgcctcagttt 246  Q
    |||||||||||||||||||||||||||    |||| ||||||||| | |||||||| | | |||||||||||| |||||    
T  23649348 gaaacttgaatcaaaagcattgctaaa----ggcctcataaactttggtaacatttgcaaaaaaaacttgcctgagttt 23649422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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