View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0374_high_25 (Length: 249)
Name: NF0374_high_25
Description: NF0374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0374_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 8840577 - 8840798
Alignment:
| Q |
1 |
tcctatgtatgctgcaatggcagacactagggtgaggtagagagctgcaaatcaagatgaaagatacgtattagtatacatagttgaattttatgaccat |
100 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8840577 |
tcctatgtatgctgcaatggtagacactagggtgaggtagagagctgcaaatcaagatgaaagatacgtattagtatacatagttgaattttatgaccat |
8840676 |
T |
|
| Q |
101 |
atgtatatttataaaaatatgtgaaagatgaagtttaattttaattaccataaggaacaggaaaacgtttcaagaggtaatactgtgcaacagatataga |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8840677 |
atgtatatttataaaaatatgtgaaagatgaagtttaattttaattaccataaggaacaggaaaacgtttcaagaggtaatactgtgcaacagatataga |
8840776 |
T |
|
| Q |
201 |
tgctgtgaatgtcattcctaat |
222 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
8840777 |
tgctgtgaatgtcattcctaat |
8840798 |
T |
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