View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0374_low_10 (Length: 413)

Name: NF0374_low_10
Description: NF0374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0374_low_10
NF0374_low_10
[»] chr3 (67 HSPs)
chr3 (29-246)||(49987988-49988203)
chr3 (287-404)||(2796180-2796297)
chr3 (287-404)||(51994196-51994313)
chr3 (287-399)||(42342792-42342904)
chr3 (287-404)||(9294268-9294385)
chr3 (287-394)||(19741212-19741319)
chr3 (287-404)||(33689689-33689806)
chr3 (287-404)||(40758148-40758262)
chr3 (287-404)||(23458289-23458406)
chr3 (287-404)||(55052558-55052674)
chr3 (287-394)||(53757043-53757150)
chr3 (287-393)||(40033777-40033883)
chr3 (287-343)||(34142589-34142645)
chr3 (289-393)||(46474818-46474922)
chr3 (287-394)||(19740924-19741031)
chr3 (287-394)||(36418008-36418115)
chr3 (287-394)||(40758430-40758537)
chr3 (287-393)||(33689383-33689488)
chr3 (305-394)||(32306742-32306831)
chr3 (305-394)||(35643870-35643959)
chr3 (305-398)||(37778587-37778680)
chr3 (305-398)||(47551512-47551605)
chr3 (289-394)||(53756747-53756852)
chr3 (287-399)||(3850442-3850554)
chr3 (287-355)||(35712045-35712113)
chr3 (287-355)||(51993965-51994033)
chr3 (287-350)||(2796461-2796524)
chr3 (287-394)||(3849032-3849139)
chr3 (295-394)||(23457988-23458087)
chr3 (308-394)||(3469222-3469308)
chr3 (287-400)||(1079535-1079648)
chr3 (305-394)||(13948799-13948888)
chr3 (289-338)||(36150530-36150579)
chr3 (289-394)||(36417691-36417796)
chr3 (289-394)||(42343051-42343156)
chr3 (305-394)||(52032457-52032546)
chr3 (287-399)||(9367742-9367854)
chr3 (290-394)||(41558202-41558306)
chr3 (306-398)||(42855621-42855713)
chr3 (305-392)||(3469520-3469607)
chr3 (295-394)||(29685950-29686049)
chr3 (287-394)||(41558009-41558116)
chr3 (291-394)||(43384288-43384391)
chr3 (287-390)||(53856381-53856484)
chr3 (292-394)||(9368621-9368723)
chr3 (287-393)||(23276304-23276410)
chr3 (309-390)||(4323526-4323607)
chr3 (288-337)||(9292245-9292294)
chr3 (289-394)||(26463635-26463740)
chr3 (305-394)||(29118856-29118945)
chr3 (305-394)||(32306443-32306532)
chr3 (305-394)||(40788738-40788827)
chr3 (289-394)||(46475101-46475205)
chr3 (305-394)||(52032157-52032246)
chr3 (287-399)||(21186010-21186122)
chr3 (287-399)||(25107214-25107326)
chr3 (305-404)||(36314577-36314676)
chr3 (305-404)||(48322656-48322755)
chr3 (287-338)||(53856016-53856067)
chr3 (287-337)||(26463963-26464013)
chr3 (287-393)||(47856388-47856494)
chr3 (289-355)||(55052295-55052361)
chr3 (305-394)||(11910718-11910807)
chr3 (288-329)||(43384668-43384709)
chr3 (305-393)||(10770509-10770597)
chr3 (305-393)||(29686259-29686347)
chr3 (305-393)||(36314317-36314405)
[»] chr8 (75 HSPs)
chr8 (58-235)||(42301579-42301754)
chr8 (287-394)||(8316908-8317015)
chr8 (287-404)||(23663824-23663941)
chr8 (287-404)||(23698554-23698671)
chr8 (287-404)||(38955704-38955821)
chr8 (287-404)||(39071677-39071794)
chr8 (287-394)||(40318284-40318391)
chr8 (287-404)||(16388836-16388953)
chr8 (287-392)||(22915680-22915785)
chr8 (287-394)||(13186061-13186168)
chr8 (286-404)||(1425332-1425449)
chr8 (289-399)||(12273168-12273278)
chr8 (287-393)||(38955993-38956099)
chr8 (287-404)||(31608823-31608940)
chr8 (287-399)||(4405975-4406087)
chr8 (287-399)||(20385569-20385681)
chr8 (287-399)||(20386745-20386857)
chr8 (287-404)||(4994967-4995083)
chr8 (289-393)||(1425056-1425160)
chr8 (287-394)||(8316654-8316761)
chr8 (287-394)||(12198951-12199058)
chr8 (287-394)||(12443379-12443486)
chr8 (287-394)||(13186379-13186486)
chr8 (288-394)||(12272920-12273026)
chr8 (305-394)||(10445653-10445742)
chr8 (289-394)||(38862883-38862988)
chr8 (287-355)||(33357499-33357567)
chr8 (287-394)||(7983429-7983536)
chr8 (307-394)||(25124584-25124671)
chr8 (287-394)||(34061648-34061755)
chr8 (288-399)||(34177285-34177396)
chr8 (287-404)||(36928480-36928594)
chr8 (305-398)||(25124877-25124970)
chr8 (287-399)||(2534696-2534808)
chr8 (287-399)||(2535865-2535977)
chr8 (287-399)||(30712032-30712143)
chr8 (287-399)||(30719809-30719920)
chr8 (287-355)||(34060490-34060558)
chr8 (288-392)||(40317966-40318070)
chr8 (288-355)||(12199265-12199332)
chr8 (288-355)||(12443693-12443760)
chr8 (287-394)||(23663546-23663653)
chr8 (287-394)||(36928796-36928903)
chr8 (287-390)||(42803542-42803645)
chr8 (287-404)||(36186377-36186491)
chr8 (305-394)||(15229950-15230039)
chr8 (305-394)||(15230249-15230338)
chr8 (287-336)||(16388584-16388633)
chr8 (287-404)||(38862619-38862736)
chr8 (287-350)||(23698309-23698373)
chr8 (287-338)||(7306400-7306451)
chr8 (287-338)||(7313381-7313432)
chr8 (287-394)||(34685578-34685684)
chr8 (287-394)||(39071962-39072068)
chr8 (287-394)||(44664509-44664616)
chr8 (308-394)||(37542246-37542332)
chr8 (289-398)||(7295243-7295352)
chr8 (305-394)||(35634417-35634506)
chr8 (305-394)||(44664826-44664915)
chr8 (305-393)||(23505071-23505159)
chr8 (287-343)||(30459372-30459428)
chr8 (287-398)||(7294103-7294213)
chr8 (305-392)||(8998009-8998096)
chr8 (305-404)||(11674714-11674813)
chr8 (288-338)||(9065667-9065717)
chr8 (296-394)||(22915399-22915497)
chr8 (289-399)||(30710859-30710968)
chr8 (306-404)||(35449888-35449986)
chr8 (305-394)||(234058-234147)
chr8 (305-394)||(710469-710558)
chr8 (305-394)||(747681-747770)
chr8 (305-394)||(871576-871665)
chr8 (305-394)||(6471709-6471798)
chr8 (287-355)||(5960047-5960115)
chr8 (305-393)||(11674984-11675072)
[»] chr7 (73 HSPs)
chr7 (287-404)||(17102021-17102138)
chr7 (287-399)||(6253472-6253584)
chr7 (287-404)||(27991740-27991857)
chr7 (287-404)||(32299015-32299132)
chr7 (287-404)||(42731420-42731537)
chr7 (287-404)||(28469318-28469435)
chr7 (287-399)||(10935795-10935907)
chr7 (287-399)||(23181309-23181421)
chr7 (287-394)||(45010924-45011031)
chr7 (287-393)||(6571014-6571120)
chr7 (287-393)||(17102310-17102416)
chr7 (287-404)||(22871587-22871704)
chr7 (287-404)||(27396905-27397022)
chr7 (287-399)||(5457222-5457334)
chr7 (287-394)||(42362451-42362558)
chr7 (287-393)||(19204490-19204596)
chr7 (289-393)||(27992029-27992133)
chr7 (287-398)||(13386063-13386174)
chr7 (287-394)||(40380004-40380111)
chr7 (287-393)||(24389106-24389212)
chr7 (287-397)||(48788804-48788914)
chr7 (287-355)||(6253799-6253867)
chr7 (287-394)||(10936114-10936221)
chr7 (287-397)||(27396630-27396740)
chr7 (291-404)||(40379774-40379887)
chr7 (288-404)||(24388821-24388937)
chr7 (287-355)||(32298778-32298846)
chr7 (287-355)||(42019598-42019666)
chr7 (287-394)||(28469011-28469118)
chr7 (287-393)||(20426651-20426757)
chr7 (287-399)||(17886805-17886917)
chr7 (305-397)||(43266285-43266377)
chr7 (287-394)||(2640179-2640286)
chr7 (305-392)||(16803967-16804054)
chr7 (305-404)||(32680874-32680973)
chr7 (295-394)||(32934357-32934456)
chr7 (289-404)||(37656855-37656970)
chr7 (288-397)||(19204775-19204884)
chr7 (305-394)||(32068115-32068204)
chr7 (305-394)||(33828292-33828381)
chr7 (289-394)||(42019917-42020022)
chr7 (305-394)||(42618229-42618318)
chr7 (305-394)||(43266584-43266673)
chr7 (294-394)||(2640498-2640598)
chr7 (287-343)||(18670234-18670290)
chr7 (287-338)||(34799534-34799585)
chr7 (287-394)||(42731739-42731846)
chr7 (309-399)||(18855969-18856059)
chr7 (305-394)||(25628796-25628885)
chr7 (287-360)||(28105502-28105575)
chr7 (305-394)||(28890598-28890687)
chr7 (305-394)||(32068414-32068503)
chr7 (305-394)||(42617930-42618019)
chr7 (287-343)||(37657208-37657264)
chr7 (287-343)||(43123176-43123232)
chr7 (307-394)||(17885649-17885736)
chr7 (307-394)||(25628499-25628586)
chr7 (287-334)||(29141556-29141603)
chr7 (287-397)||(29144299-29144409)
chr7 (287-394)||(33808324-33808431)
chr7 (287-338)||(34793905-34793956)
chr7 (291-394)||(47945362-47945465)
chr7 (291-394)||(47950792-47950895)
chr7 (287-393)||(18087659-18087765)
chr7 (295-397)||(22828135-22828237)
chr7 (287-397)||(3914455-3914560)
chr7 (308-393)||(10600268-10600353)
chr7 (305-394)||(22081877-22081966)
chr7 (305-394)||(25453147-25453236)
chr7 (305-394)||(27138259-27138348)
chr7 (305-394)||(32934666-32934755)
chr7 (363-404)||(48789113-48789154)
chr7 (287-343)||(18086290-18086346)
[»] chr4 (93 HSPs)
chr4 (287-404)||(23613310-23613427)
chr4 (287-404)||(7451835-7451952)
chr4 (287-404)||(13058038-13058155)
chr4 (287-404)||(44967348-44967465)
chr4 (287-393)||(5368948-5369054)
chr4 (287-404)||(24711112-24711229)
chr4 (287-404)||(50418947-50419064)
chr4 (287-394)||(18831350-18831457)
chr4 (287-404)||(36009123-36009241)
chr4 (288-394)||(37248238-37248344)
chr4 (287-404)||(10781794-10781911)
chr4 (287-404)||(34765690-34765807)
chr4 (287-399)||(55867429-55867541)
chr4 (287-398)||(10780714-10780825)
chr4 (287-398)||(10974323-10974434)
chr4 (287-404)||(24349675-24349792)
chr4 (287-398)||(1179116-1179227)
chr4 (287-404)||(14801737-14801854)
chr4 (287-404)||(43155806-43155923)
chr4 (287-394)||(24711400-24711507)
chr4 (287-394)||(49879208-49879315)
chr4 (287-394)||(50418669-50418776)
chr4 (287-394)||(51692839-51692946)
chr4 (287-393)||(7452124-7452230)
chr4 (287-393)||(13058303-13058409)
chr4 (287-397)||(18831634-18831744)
chr4 (287-404)||(51692554-51692671)
chr4 (289-393)||(43155532-43155636)
chr4 (287-394)||(24350752-24350859)
chr4 (287-394)||(35028318-35028425)
chr4 (287-394)||(52909254-52909361)
chr4 (289-355)||(37248564-37248630)
chr4 (294-404)||(49879486-49879596)
chr4 (289-394)||(35028001-35028106)
chr4 (288-393)||(44967071-44967176)
chr4 (288-404)||(17356232-17356348)
chr4 (287-355)||(23613637-23613705)
chr4 (287-394)||(34765381-34765488)
chr4 (287-394)||(46661234-46661341)
chr4 (288-394)||(15507993-15508098)
chr4 (287-393)||(36008845-36008951)
chr4 (287-337)||(48528486-48528536)
chr4 (288-394)||(54087015-54087121)
chr4 (305-394)||(3032601-3032690)
chr4 (305-394)||(10408207-10408296)
chr4 (288-389)||(24411360-24411461)
chr4 (305-394)||(54858878-54858967)
chr4 (288-404)||(53701814-53701930)
chr4 (289-393)||(54086698-54086802)
chr4 (305-404)||(9400798-9400897)
chr4 (287-394)||(11448049-11448156)
chr4 (288-355)||(16006152-16006219)
chr4 (287-394)||(39539238-39539345)
chr4 (291-404)||(16005843-16005956)
chr4 (287-336)||(17355926-17355975)
chr4 (305-394)||(27068929-27069018)
chr4 (305-394)||(27069228-27069317)
chr4 (305-394)||(45463092-45463181)
chr4 (287-404)||(53129816-53129933)
chr4 (305-394)||(54858579-54858668)
chr4 (287-355)||(147320-147388)
chr4 (289-393)||(11108161-11108265)
chr4 (287-355)||(15507674-15507742)
chr4 (287-355)||(24411707-24411775)
chr4 (305-393)||(45463392-45463480)
chr4 (287-343)||(54435468-54435524)
chr4 (287-338)||(148131-148182)
chr4 (305-404)||(27934551-27934650)
chr4 (287-394)||(35508560-35508667)
chr4 (287-394)||(37976473-37976580)
chr4 (287-394)||(40387468-40387575)
chr4 (287-394)||(52909573-52909680)
chr4 (287-393)||(5369188-5369294)
chr4 (305-394)||(10407908-10407997)
chr4 (305-394)||(11523968-11524057)
chr4 (305-394)||(27149314-27149402)
chr4 (305-394)||(39667094-39667183)
chr4 (309-390)||(50750910-50750991)
chr4 (287-355)||(1178058-1178125)
chr4 (305-393)||(9400538-9400626)
chr4 (287-350)||(14802099-14802162)
chr4 (305-404)||(33247552-33247651)
chr4 (305-392)||(52573548-52573635)
chr4 (312-398)||(5818089-5818175)
chr4 (305-394)||(22717958-22718047)
chr4 (305-394)||(22987169-22987258)
chr4 (287-392)||(32063658-32063763)
chr4 (304-389)||(33247292-33247377)
chr4 (289-350)||(37976156-37976217)
chr4 (287-336)||(55866112-55866161)
chr4 (287-399)||(41582448-41582560)
chr4 (287-399)||(41583546-41583658)
chr4 (287-319)||(54713617-54713649)
[»] chr5 (78 HSPs)
chr5 (287-394)||(11761750-11761857)
chr5 (287-404)||(27587149-27587266)
chr5 (287-404)||(3529152-3529269)
chr5 (287-404)||(24547435-24547552)
chr5 (287-404)||(28771148-28771265)
chr5 (287-404)||(5993890-5994007)
chr5 (288-404)||(39453302-39453418)
chr5 (289-404)||(35512151-35512266)
chr5 (287-404)||(13962865-13962982)
chr5 (287-404)||(38475309-38475426)
chr5 (287-393)||(11762038-11762144)
chr5 (287-393)||(27587436-27587542)
chr5 (289-393)||(13362549-13362653)
chr5 (287-393)||(3528874-3528980)
chr5 (287-393)||(16157176-16157282)
chr5 (287-404)||(18247087-18247202)
chr5 (287-393)||(20814456-20814562)
chr5 (289-394)||(5024338-5024443)
chr5 (287-404)||(6150455-6150572)
chr5 (287-355)||(28770870-28770938)
chr5 (287-394)||(14194424-14194531)
chr5 (289-404)||(32242245-32242360)
chr5 (288-394)||(16082979-16083085)
chr5 (288-394)||(19892310-19892416)
chr5 (287-393)||(20840534-20840640)
chr5 (288-394)||(35512434-35512540)
chr5 (287-404)||(17202400-17202517)
chr5 (287-394)||(18670203-18670307)
chr5 (287-404)||(35920494-35920611)
chr5 (289-393)||(11740690-11740794)
chr5 (287-394)||(6150740-6150847)
chr5 (287-394)||(17202719-17202826)
chr5 (287-394)||(28269423-28269530)
chr5 (287-398)||(29646363-29646474)
chr5 (287-394)||(39453619-39453726)
chr5 (287-393)||(5024020-5024126)
chr5 (287-393)||(19517928-19518034)
chr5 (288-394)||(19892628-19892734)
chr5 (298-404)||(29646672-29646777)
chr5 (287-404)||(14194733-14194849)
chr5 (287-392)||(42265736-42265841)
chr5 (289-394)||(43159134-43159239)
chr5 (287-355)||(24547178-24547246)
chr5 (286-394)||(35920228-35920336)
chr5 (287-394)||(186739-186846)
chr5 (291-394)||(8322724-8322827)
chr5 (287-394)||(16156856-16156963)
chr5 (287-393)||(32242563-32242668)
chr5 (289-394)||(11047757-11047861)
chr5 (305-394)||(33871358-33871447)
chr5 (287-355)||(18247435-18247503)
chr5 (287-394)||(21265461-21265569)
chr5 (287-399)||(24141453-24141565)
chr5 (289-392)||(5835748-5835851)
chr5 (287-394)||(16083263-16083370)
chr5 (293-404)||(38442075-38442186)
chr5 (287-394)||(38442387-38442494)
chr5 (287-394)||(38475034-38475141)
chr5 (308-398)||(22298564-22298654)
chr5 (287-394)||(11047439-11047545)
chr5 (309-394)||(20152804-20152889)
chr5 (287-336)||(20840815-20840864)
chr5 (287-399)||(186421-186532)
chr5 (287-394)||(6301863-6301968)
chr5 (305-393)||(17544367-17544455)
chr5 (299-394)||(5994209-5994304)
chr5 (287-394)||(11741837-11741944)
chr5 (287-394)||(13963149-13963256)
chr5 (287-394)||(37991200-37991307)
chr5 (305-404)||(41930535-41930634)
chr5 (287-394)||(42067844-42067951)
chr5 (287-337)||(20814137-20814187)
chr5 (289-335)||(21257540-21257586)
chr5 (305-394)||(8875468-8875557)
chr5 (305-394)||(21287975-21288064)
chr5 (289-334)||(27937379-27937424)
chr5 (288-329)||(37992673-37992714)
chr5 (287-388)||(40150140-40150241)
[»] chr2 (53 HSPs)
chr2 (287-404)||(11163333-11163450)
chr2 (287-393)||(45556113-45556219)
chr2 (287-404)||(6657879-6657996)
chr2 (287-404)||(15848089-15848206)
chr2 (287-404)||(16099056-16099173)
chr2 (287-399)||(25231163-25231275)
chr2 (293-404)||(39498317-39498428)
chr2 (287-398)||(39498595-39498706)
chr2 (287-404)||(2318160-2318276)
chr2 (289-394)||(6588686-6588791)
chr2 (287-404)||(36382162-36382279)
chr2 (287-398)||(37895348-37895459)
chr2 (287-393)||(16099345-16099451)
chr2 (287-393)||(44045323-44045429)
chr2 (287-404)||(44714071-44714187)
chr2 (288-404)||(10712725-10712841)
chr2 (288-394)||(36479719-36479826)
chr2 (287-394)||(36755408-36755515)
chr2 (287-393)||(6658168-6658274)
chr2 (305-394)||(15604358-15604447)
chr2 (287-399)||(25230103-25230215)
chr2 (287-399)||(44044115-44044227)
chr2 (289-404)||(37895657-37895772)
chr2 (287-398)||(45556363-45556474)
chr2 (305-394)||(8710786-8710875)
chr2 (297-394)||(13692540-13692637)
chr2 (305-394)||(15604657-15604746)
chr2 (305-394)||(28226062-28226151)
chr2 (305-398)||(41587254-41587346)
chr2 (290-394)||(44713799-44713903)
chr2 (287-350)||(2318874-2318937)
chr2 (287-394)||(3555251-3555358)
chr2 (287-394)||(15848408-15848515)
chr2 (287-394)||(22051313-22051420)
chr2 (287-394)||(30729622-30729729)
chr2 (287-350)||(36382491-36382554)
chr2 (287-393)||(11163055-11163161)
chr2 (288-394)||(36480038-36480144)
chr2 (287-393)||(39423836-39423942)
chr2 (287-404)||(39423516-39423633)
chr2 (287-391)||(10713046-10713150)
chr2 (287-394)||(39936567-39936673)
chr2 (292-394)||(6589679-6589781)
chr2 (287-337)||(9076444-9076494)
chr2 (287-389)||(34447814-34447916)
chr2 (287-394)||(3556329-3556436)
chr2 (311-390)||(6573568-6573647)
chr2 (287-338)||(34448171-34448222)
chr2 (287-394)||(36755094-36755201)
chr2 (305-398)||(41588372-41588465)
chr2 (287-343)||(21370573-21370629)
chr2 (324-404)||(25892432-25892512)
chr2 (287-399)||(43741991-43742103)
[»] chr1 (85 HSPs)
chr1 (287-394)||(34464450-34464557)
chr1 (287-404)||(6367563-6367680)
chr1 (287-404)||(25647885-25648002)
chr1 (287-393)||(34464770-34464876)
chr1 (287-404)||(34850375-34850492)
chr1 (287-404)||(13914377-13914494)
chr1 (287-404)||(23209637-23209754)
chr1 (287-404)||(26024424-26024541)
chr1 (287-404)||(47999402-47999519)
chr1 (288-404)||(42248475-42248591)
chr1 (287-394)||(36694568-36694675)
chr1 (287-394)||(36710669-36710776)
chr1 (287-404)||(183501-183619)
chr1 (287-393)||(19017950-19018056)
chr1 (295-404)||(14878980-14879089)
chr1 (287-404)||(19515820-19515937)
chr1 (287-404)||(34849012-34849129)
chr1 (287-404)||(40772508-40772625)
chr1 (289-394)||(46163033-46163138)
chr1 (287-394)||(26024712-26024819)
chr1 (287-393)||(183222-183328)
chr1 (287-393)||(41098734-41098840)
chr1 (287-393)||(47999124-47999230)
chr1 (293-398)||(49723042-49723147)
chr1 (287-399)||(4960541-4960653)
chr1 (287-399)||(17662165-17662277)
chr1 (288-404)||(40210680-40210796)
chr1 (287-394)||(6367882-6367989)
chr1 (287-398)||(24009576-24009687)
chr1 (289-404)||(24009851-24009966)
chr1 (287-394)||(30711647-30711754)
chr1 (287-394)||(36694283-36694390)
chr1 (287-394)||(36710384-36710491)
chr1 (287-394)||(43759142-43759249)
chr1 (287-357)||(35473632-35473702)
chr1 (290-404)||(1103463-1103579)
chr1 (289-394)||(37578195-37578300)
chr1 (287-399)||(46899062-46899174)
chr1 (287-394)||(7820955-7821062)
chr1 (287-394)||(13914069-13914176)
chr1 (287-394)||(17661853-17661959)
chr1 (287-394)||(37578512-37578619)
chr1 (287-393)||(5734011-5734116)
chr1 (289-399)||(17692500-17692610)
chr1 (287-393)||(35152344-35152450)
chr1 (305-394)||(40714761-40714850)
chr1 (287-399)||(5735026-5735138)
chr1 (287-399)||(30711328-30711440)
chr1 (287-398)||(32917576-32917687)
chr1 (287-394)||(48779439-48779546)
chr1 (289-343)||(42533027-42533081)
chr1 (305-394)||(17188973-17189062)
chr1 (305-394)||(40714463-40714552)
chr1 (287-399)||(17691220-17691332)
chr1 (287-399)||(31197066-31197173)
chr1 (287-355)||(35152689-35152757)
chr1 (289-337)||(40435348-40435396)
chr1 (287-355)||(40772818-40772886)
chr1 (287-399)||(46899915-46900027)
chr1 (305-393)||(49955366-49955454)
chr1 (287-394)||(1103781-1103888)
chr1 (324-394)||(12905977-12906047)
chr1 (287-337)||(13300281-13300331)
chr1 (304-394)||(32917278-32917368)
chr1 (305-390)||(17189173-17189258)
chr1 (305-394)||(20760823-20760912)
chr1 (305-394)||(28324824-28324912)
chr1 (305-394)||(30326515-30326604)
chr1 (305-394)||(35040932-35041021)
chr1 (289-394)||(40210373-40210478)
chr1 (305-394)||(49955665-49955754)
chr1 (290-394)||(41099053-41099157)
chr1 (305-397)||(45750157-45750249)
chr1 (287-394)||(1841460-1841567)
chr1 (287-334)||(7231629-7231676)
chr1 (287-334)||(19017630-19017677)
chr1 (287-338)||(51015634-51015685)
chr1 (287-338)||(51019725-51019776)
chr1 (289-355)||(1841817-1841883)
chr1 (287-329)||(6518181-6518223)
chr1 (305-394)||(31050969-31051058)
chr1 (287-355)||(19322893-19322961)
chr1 (289-329)||(23209365-23209404)
chr1 (305-393)||(28011658-28011746)
chr1 (363-399)||(44523451-44523487)
[»] chr6 (47 HSPs)
chr6 (287-404)||(30337450-30337567)
chr6 (287-399)||(26463180-26463292)
chr6 (288-404)||(12080638-12080754)
chr6 (289-404)||(33517537-33517652)
chr6 (287-394)||(33517854-33517961)
chr6 (287-397)||(3059573-3059683)
chr6 (287-393)||(21628034-21628140)
chr6 (287-394)||(681048-681155)
chr6 (287-394)||(30337738-30337845)
chr6 (289-404)||(30803864-30803979)
chr6 (287-393)||(8090248-8090354)
chr6 (287-393)||(17734484-17734590)
chr6 (287-393)||(33647272-33647378)
chr6 (287-404)||(30725761-30725877)
chr6 (287-399)||(13379797-13379909)
chr6 (287-394)||(679867-679974)
chr6 (289-404)||(3059260-3059375)
chr6 (287-394)||(17734197-17734304)
chr6 (287-394)||(30726079-30726186)
chr6 (288-394)||(11434804-11434910)
chr6 (287-399)||(12408486-12408598)
chr6 (287-394)||(12080956-12081063)
chr6 (287-399)||(8089444-8089556)
chr6 (287-390)||(15116556-15116659)
chr6 (287-394)||(20651011-20651118)
chr6 (287-394)||(21627714-21627821)
chr6 (287-393)||(15115340-15115446)
chr6 (305-394)||(22502793-22502882)
chr6 (289-350)||(30804225-30804286)
chr6 (305-394)||(31407196-31407285)
chr6 (295-394)||(21836348-21836447)
chr6 (287-393)||(12407509-12407615)
chr6 (289-335)||(22617886-22617932)
chr6 (305-394)||(7160823-7160912)
chr6 (305-394)||(7905262-7905351)
chr6 (305-394)||(14196904-14196993)
chr6 (305-394)||(22503092-22503181)
chr6 (314-394)||(11392866-11392946)
chr6 (307-394)||(21836053-21836139)
chr6 (287-393)||(28498346-28498452)
chr6 (305-394)||(6517522-6517610)
chr6 (305-394)||(7161122-7161211)
chr6 (305-394)||(7905561-7905650)
chr6 (305-394)||(15913866-15913955)
chr6 (363-404)||(24210608-24210649)
chr6 (287-399)||(20651962-20652074)
chr6 (287-343)||(26464570-26464626)
[»] scaffold0007 (2 HSPs)
scaffold0007 (287-404)||(1770-1887)
scaffold0007 (287-338)||(2117-2168)
[»] scaffold0020 (2 HSPs)
scaffold0020 (289-404)||(139675-139790)
scaffold0020 (289-343)||(140012-140066)
[»] scaffold0031 (2 HSPs)
scaffold0031 (287-404)||(68966-69083)
scaffold0031 (287-394)||(69285-69392)
[»] scaffold0707 (1 HSPs)
scaffold0707 (287-394)||(6399-6506)
[»] scaffold0005 (2 HSPs)
scaffold0005 (287-404)||(37873-37990)
scaffold0005 (287-350)||(37565-37628)
[»] scaffold0328 (1 HSPs)
scaffold0328 (295-394)||(11458-11557)
[»] scaffold0075 (2 HSPs)
scaffold0075 (287-393)||(14430-14536)
scaffold0075 (287-337)||(14767-14817)
[»] scaffold0771 (1 HSPs)
scaffold0771 (305-394)||(939-1028)
[»] scaffold0388 (1 HSPs)
scaffold0388 (305-394)||(12557-12646)
[»] scaffold0128 (1 HSPs)
scaffold0128 (289-394)||(19860-19965)
[»] scaffold0006 (2 HSPs)
scaffold0006 (305-394)||(222107-222196)
scaffold0006 (307-394)||(221812-221898)
[»] scaffold0775 (2 HSPs)
scaffold0775 (287-394)||(4963-5070)
scaffold0775 (292-394)||(6298-6400)
[»] scaffold0008 (1 HSPs)
scaffold0008 (305-399)||(239866-239960)
[»] scaffold0599 (1 HSPs)
scaffold0599 (305-394)||(2412-2501)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 49988203 - 49987988
Alignment:
Q  29 aaatgtagctttaaaatactgtcacaagtttacctttcacagccagctggcacatacacccaacaatttcagcaacagatgaactgtatactccaccaga 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49988203 aaatgtagctttaaaatactgtcacaagtttacctttcacagccagctggcacatacacccaacaatttcagcaacagatgaactgtatactccatcaga 49988104  T
Q  129 aagagggagcataaaagcatatgctccacttcttagtaaatagacctataaaaccagcaaccagatgcaaatgctatttcctcctccggagagtgaaatt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49988103 aagagggagcataaaagcatatgctccacttcttagtaaatagacctat--aaccagcaaccagatgcaaatgctatttcctcctccggagagtgaaatt 49988006  T
Q  229 ttatctacataatatata 246  Q
    ||||||||||||||||||    
T  49988005 ttatctacataatatata 49987988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 2796180 - 2796297
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  2796180 gcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 2796279  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  2796280 aaaatttcgtccctctcc 2796297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 51994313 - 51994196
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||| |||||| | |||| ||  |||||||||| |||||||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcattt 51994214  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  51994213 aaaatttcgtccctctcc 51994196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 42342792 - 42342904
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||| | ||||||||||| ||  ||||| |||| |||||||||||||    
T  42342792 gcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatcattt 42342891  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  42342892 aaaatttcgtccc 42342904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 9294385 - 9294268
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| | || |||||| |||||| ||  ||||| |||| |||||||||||||    
T  9294385 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcattt 9294286  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  9294285 aaaatttcgtccctctcc 9294268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 19741319 - 19741212
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| || ||| ||  ||||| || | |||||||||||||    
T  19741319 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcattt 19741220  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  19741219 aaaatttc 19741212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 33689806 - 33689689
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| |||||| |||||| |||||| |||||| ||  ||||| |||| | |||||||||||    
T  33689806 gcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatcattt 33689707  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  33689706 aaaatttcgtccctctcc 33689689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 40758148 - 40758262
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||| |||| | ||  |||||  ||| |||||||||||||    
T  40758148 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct-gcaatttaccc--gcattgtttaatcattt 40758244  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  40758245 aaaatttcgtccctctcc 40758262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 23458406 - 23458289
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||||||  |||| |||||| |||| | ||  ||||| |||| |||||||||||||    
T  23458406 gcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatcattt 23458307  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  23458306 aaaatttcgtccctctcc 23458289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 55052674 - 55052558
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||| ||||||| ||  |||||| ||||||||||||| ||| || || ||| ||  |||| ||||| |||||||||||||    
T  55052674 gcttaaatatgtatttgatccttgtaattaggggtt-tttaaaaattggtccatgtaatcgttaatcatggcaatttacctctgcattgtttaatcattt 55052576  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  55052575 aaaatttcgtccctctcc 55052558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 53757150 - 53757043
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||||||||||  |||||||||| ||||||||||||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcattt 53757051  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  53757050 aaaatttc 53757043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 40033883 - 40033777
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||   | || | |||| |||||| ||  ||||| |||| |||||||||||||    
T  40033883 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatcattt 40033784  T
Q  387 aaaattt 393  Q
    |||||||    
T  40033783 aaaattt 40033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 34142645 - 34142589
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  34142645 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgta 34142589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 46474818 - 46474922
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||| ||||||||||| |||||||||| |||||||  |||| |||||| || ||| ||  ||||  |||| |||||||||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcatttaa 46474917  T
Q  389 aattt 393  Q
    |||||    
T  46474918 aattt 46474922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 19740924 - 19741031
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||| | ||||||||||  ||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  19740924 gcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcattt 19741023  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  19741024 aaaatttc 19741031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 36418115 - 36418008
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||| ||||||| |||||||||| |||||| | |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  36418115 gcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 36418016  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  36418015 aaaatttc 36418008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 40758537 - 40758430
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| ||||||| ||||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  40758537 gcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 40758438  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  40758437 aaaatttc 40758430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 33689383 - 33689488
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||| |||||| | || | ||  || || ||||||  ||||||||||    
T  33689383 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt-catgtattcgctaattcttgcaaactagccttgcaatcattaatcattt 33689481  T
Q  387 aaaattt 393  Q
    |||||||    
T  33689482 aaaattt 33689488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 32306831 - 32306742
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| ||| ||||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  32306831 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 32306742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 35643870 - 35643959
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  35643870 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttc 35643959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 398
Target Start/End: Complemental strand, 37778680 - 37778587
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcc 398  Q
    |||||||||||||| ||| |||||| ||| |||| |||| | |||| |||||| ||  ||||| |||| |||||||||||||||||||||||||    
T  37778680 tccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcatcc 37778587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 398
Target Start/End: Original strand, 47551512 - 47551605
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcc 398  Q
    ||||||||||||| |||| |||||| ||| |||| |||| |||||| | |||| ||  ||||| |||| |||||||||||||||||||||||||    
T  47551512 tccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatcatttaaaatttcatcc 47551605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 53756747 - 53756852
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||| ||||||||||| |||||||||| |||| | |||||| ||| || || | | ||  ||||| |||| |||||||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcatttaa 53756846  T
Q  389 aatttc 394  Q
    ||||||    
T  53756847 aatttc 53756852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 3850554 - 3850442
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| |||||||||| |||||||||| |||||||| |||| ||| || |||| | ||  || | |||||||  |||||| |||    
T  3850554 gcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgataatccttggaaactagctctgcaatcattaatcgttt 3850455  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  3850454 aaaatttcgtccc 3850442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 35712045 - 35712113
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| |||||||||||||||  || |||||| ||||||||||||| |||||| ||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaatcct 35712113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 51993965 - 51994033
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||||||| ||||||||||  |||||||||| |||||||| |||| |||||| ||||    
T  51993965 gcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcct 51994033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 2796524 - 2796461
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgcta 350  Q
    ||||||||||||| || ||||||||||||||| || ||||||| ||||||||||||| ||||||    
T  2796524 gcttaaatatgtacttcatccttgcaattaggagttgtttaaaaattggtccatgtattcgcta 2796461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 3849032 - 3849139
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||| | || |||| |||||||||| |||||||||| |||||||| |||| ||| || |||| | ||  || |||||||||  ||||||||||    
T  3849032 gcttaaatatgaaattcatccctgcaattaggagtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccctgcaatcattaatcattt 3849131  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  3849132 aaaatttc 3849139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 23457988 - 23458087
Alignment:
Q  295 atgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||| ||||||||||||| | |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttc 23458087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 394
Target Start/End: Original strand, 3469222 - 3469308
Alignment:
Q  308 ttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||||| ||| |||||| ||| ||||||||| || ||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  3469222 ttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 3469308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 400
Target Start/End: Complemental strand, 1079648 - 1079535
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| ||| |||| |||||||||| ||| |||||| |||||||| |||| ||| || |||||| ||  || || ||||| |||||||| |||    
T  1079648 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatctttt 1079549  T
Q  387 aaaatttcatccca 400  Q
    |||||||| |||||    
T  1079548 aaaatttcgtccca 1079535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 13948799 - 13948888
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||||||||  || |||||| ||| ||||||||| |||||| || ||| ||  ||||| |||| |||||||||||||||||||||    
T  13948799 tccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 13948888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 36150530 - 36150579
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc 36150579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 36417691 - 36417796
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    ||||| |||| ||| ||||||| ||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||||    
T  36417691 ttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 36417790  T
Q  389 aatttc 394  Q
    ||||||    
T  36417791 aatttc 36417796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 42343156 - 42343051
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||| ||||| | |||||||||| |||| |||||||| |||||| || | | ||  ||  | ||||||| ||||||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaatgattaatcatttaa 42343057  T
Q  389 aatttc 394  Q
    ||||||    
T  42343056 aatttc 42343051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 52032546 - 52032457
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||  ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  52032546 tccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaatcatttaaaatttc 52032457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 9367742 - 9367854
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| | |||||||| |||||||||| | |||||  |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  9367742 gcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaatcattt 9367841  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  9367842 aaaatttcgtccc 9367854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 394
Target Start/End: Complemental strand, 41558306 - 41558202
Alignment:
Q  290 taaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaa 389  Q
    ||||||||||||| |||| |||||||||| |||||||||| |||  |||||||| |||||| |||| | ||  ||  | ||||||  |||||||||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaa 41558207  T
Q  390 atttc 394  Q
    |||||    
T  41558206 atttc 41558202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 42855713 - 42855621
Alignment:
Q  306 ccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcc 398  Q
    ||||||||||||| ||| |||||| ||| ||||||||| |||||| |||| | ||  || || |||| | |||||||||||||||||||||||    
T  42855713 ccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttcatcc 42855621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 3469607 - 3469520
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatt 392  Q
    |||||||||||||| ||| |||||| ||| || | |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||    
T  3469607 tccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatt 3469520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 29685950 - 29686049
Alignment:
Q  295 atgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||  |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||  ||  || || |||| |||||||||||||||||||||    
T  29685950 atgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcatttaaaatttc 29686049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 41558009 - 41558116
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||||||||| | |||||||||| |||||| | |||| |||||| |||| | |   || || ||||||  ||||||||||    
T  41558009 gcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttgcacattaaccttgcaattattaatcattt 41558108  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  41558109 aaaatttc 41558116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 43384288 - 43384391
Alignment:
Q  291 aaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||||||  ||| ||||||||| |  || |||||| |||||||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||    
T  43384288 aaatatgtattccatctttgcaattacggatcctttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaa 43384387  T
Q  391 tttc 394  Q
    ||||    
T  43384388 tttc 43384391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 53856484 - 53856381
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||| ||||| |||| |||| ||||| |||||||| |||| || ||| |||| | ||   | |||||||||  ||||||||||    
T  53856484 gcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgtattcactaatccttgcaaacaaaccctgcaattattaatcattt 53856385  T
Q  387 aaaa 390  Q
    ||||    
T  53856384 aaaa 53856381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 9368723 - 9368621
Alignment:
Q  292 aatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaat 391  Q
    |||||||||||  |||||||||||||| |||||||||| |||||||| |||| ||  || |||| | ||  ||| | | || ||||||||||||||||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaaaat 9368624  T
Q  392 ttc 394  Q
    |||    
T  9368623 ttc 9368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 23276410 - 23276304
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| ||| |||| |||||||||| ||| |||||| |||||||| |||| |||||| ||| || ||  ||||||| |||   ||||||||||    
T  23276410 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctacaaacgttaatcattt 23276311  T
Q  387 aaaattt 393  Q
    |||||||    
T  23276310 aaaattt 23276304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 4323607 - 4323526
Alignment:
Q  309 tgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||||| |||||||||| ||| |||| |||| |||||| |||||| ||  || || |||| |||||||||||||||||    
T  4323607 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaa 4323526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 9292245 - 9292294
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtc 337  Q
    ||||||||||||||| |||||||||||||||  ||||||||| |||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggtc 9292294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 26463635 - 26463740
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||| | |||||||||| |||| ||| |||| ||| || |||| | ||  ||  | ||||||  ||||||||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatccttgcaaattagtcttgcaatcattaatcatttaa 26463734  T
Q  389 aatttc 394  Q
    ||||||    
T  26463735 aatttc 26463740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 29118945 - 29118856
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||  |||| |||||| |||||| ||  ||||  |||| |||||||||||||||||||||    
T  29118945 tccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatcatttaaaatttc 29118856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 32306443 - 32306532
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| || |||||| |||||| || ||  ||  ||||| |||| |||||||||||||||||||||    
T  32306443 tccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaatttc 32306532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 40788827 - 40788738
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||| ||  ||| | |||| ||||||||| |||||||||||    
T  40788827 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatcttttaaaatttc 40788738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 46475205 - 46475101
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| |||||| |||||||| |||||||||| |||| | | |||| |||||| |||| | ||  || || ||||||  ||||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattgatac-tgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 46475107  T
Q  389 aatttc 394  Q
    ||||||    
T  46475106 aatttc 46475101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 52032157 - 52032246
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| |||  ||| |||| |||||| |||| | ||  ||||| |||| |||||||||||||||||||||    
T  52032157 tccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 52032246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 21186122 - 21186010
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| |||  ||| |||||||||| ||| |||||| |||||| |||||| ||| || |||||| ||  ||||| |||||   ||||||||||    
T  21186122 gctttaatatgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatcattt 21186023  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  21186022 aaaatttcgtccc 21186010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 25107214 - 25107326
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||| ||||| ||| |||| |||||||||| ||| |||||| |||||||  | || |||||| |||||| ||  | |||||||||   ||||||||||    
T  25107214 gcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcattt 25107313  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  25107314 aaaatttcgtccc 25107326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 36314676 - 36314577
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    |||||||||||||| |||||||||| ||| |||| |||| | | || |||||| ||  || || ||||||  |||||||||||||||||| |||| ||||    
T  36314676 tccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctcc 36314577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 48322755 - 48322656
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    |||||||||||||| |||||||||| ||| |||| |||| | | || |||||| ||  || || ||||||  |||||||||||||||||| |||| ||||    
T  48322755 tccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctcc 48322656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 53856016 - 53856067
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    ||||||||||||||||||||| ||||| |||| |||| ||||| ||||||||    
T  53856016 gcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtcc 53856067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 26464013 - 26463963
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtc 337  Q
    |||||||||||||||| ||||||||||||||   ||||||||| |||||||    
T  26464013 gcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtc 26463963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 47856388 - 47856494
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| |||  ||| |||||||| | |||||||||| |||||||| |||| ||| || |||||  ||  ||| | ||||| ||||||||||||    
T  47856388 gctttaatatgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatcattt 47856487  T
Q  387 aaaattt 393  Q
    |||||||    
T  47856488 aaaattt 47856494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 55052295 - 55052361
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||||||||  ||||||| ||||| |||| |||||||  |||| |||||| ||||    
T  55052295 ttaaatatgtatttgatccttataattaggggtcgtctaaaaattggtctctgtattcgctaatcct 55052361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 11910718 - 11910807
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||  ||| |||||| |||  ||| |||| |||||| |||| | ||  ||||| |||| |||||||||||||||||||||    
T  11910718 tccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 11910807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 43384709 - 43384668
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaa 329  Q
    ||||||||||||||| |||||||||||||||  |||||||||    
T  43384709 cttaaatatgtatttcatccttgcaattaggaatcgtttaaa 43384668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 10770509 - 10770597
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    |||||||||||||| ||| |||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  |||||||||||||||||    
T  10770509 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaattt 10770597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 29686347 - 29686259
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    |||||||||||||| ||| ||| || ||| |||  |||| || ||| |||||| ||  ||||| |||| ||||||||||||||||||||    
T  29686347 tccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaattt 29686259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 36314317 - 36314405
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    |||||||||||||| ||| |||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  |||||||||||||||||    
T  36314317 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaattt 36314405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 58 - 235
Target Start/End: Original strand, 42301579 - 42301754
Alignment:
Q  58 ttacctttcacagccagctggcacatacacccaacaatttcagcaacagatgaactgtatactccaccagaaagagggagcataaaagcatatgctccac 157  Q
    |||||||||||| ||| ||||||||| || ||||||||  |||||||||| ||||||| | ||||||||||||||||||||| |||| || |||||||||    
T  42301579 ttacctttcacaaccatctggcacatgcatccaacaatcgcagcaacagaggaactgtctgctccaccagaaagagggagcagaaaaccagatgctccac 42301678  T
Q  158 ttcttagtaaatagacctataaaaccagcaaccagatgcaaatgctatttcctcctccggagagtgaaattttatcta 235  Q
    ||||| |||||||| || ||  ||||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||    
T  42301679 ttcttcgtaaatagtcccat--aaccagcaaccaggtccaaatgctatttcctcctcgggagagtgatattttatcta 42301754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 8317015 - 8316908
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  8317015 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 8316916  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  8316915 aaaatttc 8316908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 23663941 - 23663824
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||  |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  23663941 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 23663842  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  23663841 aaaatttcgtccctctcc 23663824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 23698671 - 23698554
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  23698671 gcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 23698572  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  23698571 aaaatttcgtccctctcc 23698554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 38955704 - 38955821
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||||||| ||  ||||||||| |||||||  |||| |||||| |||||| ||  |||||||||| |||||||||||||    
T  38955704 gcttaaatatgtatttgatccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgcattgtttaatcattt 38955803  T
Q  387 aaaatttcatcccactcc 404  Q
    ||||||||||||| ||||    
T  38955804 aaaatttcatccctctcc 38955821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 39071677 - 39071794
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  39071677 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 39071776  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  39071777 aaaatttcgtccctctcc 39071794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 40318391 - 40318284
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| || ||||||| ||| ||||||||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  40318391 gcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 40318292  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  40318291 aaaatttc 40318284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 16388953 - 16388836
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| |||||| |||||| | |||| |||||| ||  ||||| |||| |||||||||||||    
T  16388953 gcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcattt 16388854  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  16388853 aaaatttcgtccctctcc 16388836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 22915785 - 22915680
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||||| ||||  ||||||||| ||||||||||||| |||||| || ||| ||  ||||| |||| |||||||||||||    
T  22915785 gcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 22915686  T
Q  387 aaaatt 392  Q
    ||||||    
T  22915685 aaaatt 22915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 13186061 - 13186168
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||||||  ||||||||| |||||| |||||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  13186061 gcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 13186160  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  13186161 aaaatttc 13186168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 404
Target Start/End: Complemental strand, 1425449 - 1425332
Alignment:
Q  286 cgcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatt 385  Q
    ||||||||||| ||||||||||||| ||||||  |||||||||| |||||||| |||| || ||| |||||| ||  |||||||||| ||||||||||||    
T  1425449 cgcttaaatatatatttgatccttgtaattagaggtcgtttaaaaattggtcc-tgtaatcactaatcctggcaatttacccctgcattgtttaatcatt 1425351  T
Q  386 taaaatttcatcccactcc 404  Q
    ||||||||| |||| ||||    
T  1425350 taaaatttcgtccctctcc 1425332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 12273278 - 12273168
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||| || ||| |  ||  ||||| |||| |||||||||||||||    
T  12273278 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaa 12273179  T
Q  389 aatttcatccc 399  Q
    |||||| ||||    
T  12273178 aatttcgtccc 12273168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 38956099 - 38955993
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  38956099 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatcattaatcattt 38956000  T
Q  387 aaaattt 393  Q
    |||||||    
T  38955999 aaaattt 38955993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 31608940 - 31608823
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||| |||||| ||||||||||||| | |||||||||| ||||||||||||| |||||| |||| | ||  ||||| |||| ||| |||||||||    
T  31608940 gcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcattt 31608841  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  31608840 aaaatttcgtccctctcc 31608823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 4406087 - 4405975
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||| ||||||| || ||||||| ||||||||||||| | | || |||| | ||  ||||| ||||||||||||||||||    
T  4406087 gcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcattt 4405988  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  4405987 aaaatttcgtccc 4405975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 20385569 - 20385681
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  20385569 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 20385668  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  20385669 aaaatttcgtccc 20385681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 20386857 - 20386745
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || ||  |||||  ||||||||||    
T  20386857 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatcattt 20386758  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  20386757 aaaatttcgtccc 20386745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 4995083 - 4994967
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| |||||||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  4995083 gcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcc-tgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 4994985  T
Q  387 aaaatttcatcccactcc 404  Q
     ||||||| |||| ||||    
T  4994984 caaatttcgtccctctcc 4994967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 1425056 - 1425160
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| |||| || ||| |||| | ||  || || ||||||  ||||||||||||    
T  1425056 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcatttaa 1425155  T
Q  389 aattt 393  Q
    |||||    
T  1425156 aattt 1425160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 8316654 - 8316761
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||| ||| || |||| | ||  || || ||||||  ||||||||||    
T  8316654 gcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatcattt 8316753  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  8316754 aaaatttc 8316761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 12198951 - 12199058
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| | || |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  12198951 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcattt 12199050  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  12199051 aaaatttc 12199058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 12443379 - 12443486
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| | || |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  12443379 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcattt 12443478  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  12443479 aaaatttc 12443486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 13186486 - 13186379
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||| ||||| ||||||||||||||| |||||||||| |||||| |||||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  13186486 gcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 13186387  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  13186386 aaaatttc 13186379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 12272920 - 12273026
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||||||  |||| |||||| |||| | ||  || || ||||||  |||||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcattta 12273019  T
Q  388 aaatttc 394  Q
    |||||||    
T  12273020 aaatttc 12273026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 10445742 - 10445653
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||||||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  10445742 tccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10445653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 38862988 - 38862883
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| |||| | ||  || || ||||||  ||||||||||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 38862889  T
Q  389 aatttc 394  Q
    ||||||    
T  38862888 aatttc 38862883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 33357499 - 33357567
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||| |||||| ||||    
T  33357499 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgtattcgctaatcct 33357567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 7983429 - 7983536
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||| ||||| |||  |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  7983429 gcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 7983528  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  7983529 aaaatttc 7983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 307 - 394
Target Start/End: Original strand, 25124584 - 25124671
Alignment:
Q  307 cttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| ||| |||||| ||| ||||||||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  25124584 cttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 25124671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 34061755 - 34061648
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||  ||||||||||||||  |||||||||| |||| |||||||| |||||| |||| | ||  | ||| |||| | |||||||||||    
T  34061755 gcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcattt 34061656  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  34061655 aaaatttc 34061648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 399
Target Start/End: Complemental strand, 34177396 - 34177285
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||| ||| ||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || |||| | ||||||||||||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgtaaactagccttgcattctttaatcattta 34177297  T
Q  388 aaatttcatccc 399  Q
    ||||||| ||||    
T  34177296 aaatttcgtccc 34177285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 36928480 - 36928594
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||   |||| |||||| | |||||||||| ||||||| ||||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  36928480 gcttaaatatgtattt---cctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 36928576  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  36928577 aaaatttcgtccctctcc 36928594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 398
Target Start/End: Complemental strand, 25124970 - 25124877
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcc 398  Q
    |||||||||||||||||| |||||| ||| |||  |||| |||||| | |||| ||  ||||| |||| |||||||||||||||||||||||||    
T  25124970 tccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcatcc 25124877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 2534696 - 2534808
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||   || |||||||| | |||||||||| |||||| |||||| |||||| |||| | ||  ||| | |||| |||||||||||||    
T  2534696 gcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatcattt 2534795  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  2534796 aaaatttcgtccc 2534808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 2535977 - 2535865
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| |||||||||||  ||| |||||||||| ||| |||||| |||||||| |||| ||| || |||||| ||  ||||| | ||| ||||||||||||    
T  2535977 gctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcattt 2535878  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  2535877 aaaatttcgtccc 2535865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 30712143 - 30712032
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||| |||||| | |||||||| |||||||| |||| | |||| |||| | ||  || || ||||||  ||||||||||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtcc-tgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30712045  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  30712044 aaaatttcgtccc 30712032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 30719920 - 30719809
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||| |||||| | |||||||| |||||||| |||| | |||| |||| | ||  || || ||||||  ||||||||||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtcc-tgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30719822  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  30719821 aaaatttcgtccc 30719809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 34060490 - 34060558
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| |||||||||||||   |||||||||| ||||||||||||| |||||| ||||    
T  34060490 gcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatcct 34060558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 40317966 - 40318070
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||| |||  |||| |||||| |||| | ||  || || ||||||  |||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcattta 40318065  T
Q  388 aaatt 392  Q
    |||||    
T  40318066 aaatt 40318070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 355
Target Start/End: Complemental strand, 12199332 - 12199265
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    ||||||||||||||||||||||  ||||||| |||||||||| |||||||| |||| |||||| ||||    
T  12199332 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatcct 12199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 355
Target Start/End: Complemental strand, 12443760 - 12443693
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    ||||||||||||||||||||||  ||||||| |||||||||| |||||||| |||| |||||| ||||    
T  12443760 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaatcct 12443693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 23663546 - 23663653
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| |||||||| |||| ||| || |||| | ||  || || || |||  ||||||||||    
T  23663546 gcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcattaatcattt 23663645  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  23663646 aaaatttc 23663653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 36928903 - 36928796
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| |||||||||| | ||||||||| ||||||| ||||| | |||| |||| | ||  || || ||||||  ||||||||||    
T  36928903 gcttaaatatgtatttcatcgttgcaattagatatcgtttaaaaattggtctatgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 36928804  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  36928803 aaaatttc 36928796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 42803645 - 42803542
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||  |||||||||| |||||||| | || || | | || ||| ||  ||||| |||| |||||||||||||    
T  42803645 gcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtccctataatcaccaatcgtggcaatttacccttgcattgtttaatcattt 42803546  T
Q  387 aaaa 390  Q
    ||||    
T  42803545 aaaa 42803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 36186491 - 36186377
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||||||  | || |||||| |||||  ||  ||||  |||| |||||||||||||    
T  36186491 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaa-attggtc--tataatcgctaatcctgacaatttacctttgcattgtttaatcattt 36186395  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  36186394 aaaatttcgtccctctcc 36186377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 15229950 - 15230039
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| || | |||||||||||||||||||||    
T  15229950 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgtttaatcatttaaaatttc 15230039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 15230338 - 15230249
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||||||| |||||| ||| |||| |||| |||||| || ||  ||  ||||| |||| |||||||||||||||||||||    
T  15230338 tccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaatttc 15230249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 16388584 - 16388633
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggt 336  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  16388584 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 16388633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 38862619 - 38862736
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| | | ||||||||  ||  | |||||| |||||| | |||| ||  ||||  |||| |||||||||||||    
T  38862619 gcttaaatatgtatttcatccttgcaattaagggccgtttaaaatttttttcatgtaatcgctaatactggtaatttacctttgcattgtttaatcattt 38862718  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  38862719 aaaatttcgtccctctcc 38862736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 23698309 - 23698373
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaatta-ggtgtcgtttaaagattggtccatgtagtcgcta 350  Q
    |||||||||||||||||||||||||||||| || |||||||||| ||| |||| |||| ||||||    
T  23698309 gcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcgcta 23698373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 7306400 - 7306451
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    ||||||||||||||||||||| ||||| |||| |||||||||| ||||||||    
T  7306400 gcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtcc 7306451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 7313432 - 7313381
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    ||||||||||||||||||||| ||||| |||| |||||||||| ||||||||    
T  7313432 gcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtcc 7313381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 34685684 - 34685578
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||||||  ||||||||| |||||| | |||| |||||| |||| | ||  || || | ||||  ||||||||||    
T  34685684 gcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggt-cttgtattcgctaatccttgcaaactagccttacaatcattaatcattt 34685586  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  34685585 aaaatttc 34685578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 39072068 - 39071962
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||| | | |||||||||| |||||||| |||| ||| || |||| | ||  || || ||||||  ||||||||||    
T  39072068 gcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgtattcg-taatccttgcaaactagccttgcaatcattaatcattt 39071970  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  39071969 aaaatttc 39071962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 44664509 - 44664616
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||| ||||| |||  |||||||||||||| ||| |||||| ||| |||| |||| ||| || |||||| ||  || || |||| |||||||||||||    
T  44664509 gcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcattt 44664608  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  44664609 aaaatttc 44664616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 394
Target Start/End: Original strand, 37542246 - 37542332
Alignment:
Q  308 ttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||||| ||| |||||| ||| |||| | || |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  37542246 ttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 37542332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 398
Target Start/End: Complemental strand, 7295352 - 7295243
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||| |  ||||||||| || ||||| |||| |||||| |||| | ||  ||  | |||| | ||||||| |||||    
T  7295352 ttaaatatgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcattctttaatcgtttaa 7295253  T
Q  389 aatttcatcc 398  Q
    ||||||||||    
T  7295252 aatttcatcc 7295243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 35634506 - 35634417
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| | ||| |||||| ||| |||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  35634506 tccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 35634417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 44664915 - 44664826
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||  |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  44664915 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 44664826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 23505071 - 23505159
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    |||||||||||||| ||| |||||| ||| ||||||||| | |||| || ||| ||  ||||| ||||||  |||||||||||||||||    
T  23505071 tccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttgcaattgttaatcatttaaaattt 23505159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 30459372 - 30459428
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    |||||||||||||||| |||||| |||||||| |||||||||| ||| ||| |||||    
T  30459372 gcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgta 30459428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 7294103 - 7294213
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||||||||||  |||||||||| |||| ||  | || |||||| |||| | ||  || || |||| | |||||||||||    
T  7294103 gcttaaatatgtatttcatc-ttgcaattagaggtcgtttaaaaattgatctctatattcgctaatccttgtaaactagccttgcattctttaatcattt 7294201  T
Q  387 aaaatttcatcc 398  Q
    ||||||||||||    
T  7294202 aaaatttcatcc 7294213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 8998096 - 8998009
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatt 392  Q
    |||||||||||||| ||| |||||| ||| || |||||| |||||| || ||  ||  ||||| |||| |||||||||||||||||||    
T  8998096 tccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgcattgtttaatcatttaaaatt 8998009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 404
Target Start/End: Original strand, 11674714 - 11674813
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    |||||||||||||| |||||||||| ||| |||| |||| | | || |||||| ||  || || ||||||  |||||||||||||||||| |||| ||||    
T  11674714 tccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctcc 11674813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 9065667 - 9065717
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    ||||||||||||||| ||| ||| ||||||| |||||||||| ||||||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtcc 9065717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 22915399 - 22915497
Alignment:
Q  296 tgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||| |||||||||||   || |||||| ||||||||||||| |||||| |||| | ||  || || ||||||  ||||||||||| ||||||    
T  22915399 tgtatttgattcttgcaattagagatcatttaaaaattggtccatgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttacaatttc 22915497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 30710859 - 30710968
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||||||| ||||||||||  || ||||||| |||||| |||||| |||||| |  | | ||  || || ||||||  ||||||||||||    
T  30710859 ttaaatatgtatttgatctttgcaattagaggttgtttaaa-attggttcatgtattcgctaatttttgcaaactaaccttgcaatcattaatcatttaa 30710957  T
Q  389 aatttcatccc 399  Q
    |||||| ||||    
T  30710958 aatttcgtccc 30710968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 404
Target Start/End: Complemental strand, 35449986 - 35449888
Alignment:
Q  306 ccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    ||||||||||||| | | |||||| ||| ||||||||| | |||| |||||| |   || |||||||||  |||||||||||||||||| |||| ||||    
T  35449986 ccttgcaattaggcggcatttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatttcgtccctctcc 35449888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 234147 - 234058
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||||||||  || |||||| ||| |||| |||| | | || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  234147 tccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 234058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 710558 - 710469
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||||||||  || |||||| ||| |||| |||| | | || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  710558 tccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 710469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 747770 - 747681
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||||||||  || |||||| ||| |||| |||| | | || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  747770 tccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 747681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 871665 - 871576
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||||||||  || |||||| ||| |||| |||| | | || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  871665 tccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 871576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 6471709 - 6471798
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||  |||  | || |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  6471709 tccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 6471798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 5960047 - 5960115
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    ||||||| |||||||| |||||||||||||||  ||| ||||| |||| ||| |||| |||||| ||||    
T  5960047 gcttaaacatgtatttcatccttgcaattagggatcgattaaaaattgctccctgtaatcgctaatcct 5960115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 11675072 - 11674984
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    |||||||||||||| ||| |||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  |||||||||||||||||    
T  11675072 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaattt 11674984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 8e-34; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 17102021 - 17102138
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  |||||||||| |||||||||||||    
T  17102021 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 17102120  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  17102121 aaaatttcgtccctctcc 17102138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 6253472 - 6253584
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  |||||||||| |||||||||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 6253571  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  6253572 aaaatttcgtccc 6253584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 27991740 - 27991857
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||| | |||| ||| |||| |||||| |||||| ||  |||||||||| |||||||||||||    
T  27991740 gcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 27991839  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  27991840 aaaatttcgtccctctcc 27991857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 32299132 - 32299015
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| ||||||||||||     
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattg 32299033  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  32299032 aaaatttcgtccctctcc 32299015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 42731420 - 42731537
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||| | ||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  |||||||||| |||||||||||||    
T  42731420 gcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 42731519  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  42731520 aaaatttcgtccctctcc 42731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 28469435 - 28469318
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| ||| || |||||| ||  ||||| |||| |||||||||||||    
T  28469435 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcattt 28469336  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  28469335 aaaatttcgtccctctcc 28469318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 10935795 - 10935907
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||| ||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  10935795 gcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 10935894  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  10935895 aaaatttcgtccc 10935907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 23181421 - 23181309
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||| |||||| || ||| ||  ||||| |||| |||||||||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 23181322  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  23181321 aaaatttcgtccc 23181309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 45011031 - 45010924
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||| |||||| |||| | ||  ||||| |||| |||||||||||||    
T  45011031 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcattt 45010932  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  45010931 aaaatttc 45010924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 6571014 - 6571120
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||| || |||||  ||  ||||| |||| |||||||||||||    
T  6571014 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcattt 6571113  T
Q  387 aaaattt 393  Q
    |||||||    
T  6571114 aaaattt 6571120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 17102416 - 17102310
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  17102416 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaatcattt 17102317  T
Q  387 aaaattt 393  Q
    |||||||    
T  17102316 aaaattt 17102310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 22871704 - 22871587
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||| | |||| |||| | ||  ||||| |||| |||||||||||||    
T  22871704 gcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatcattt 22871605  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  22871604 aaaatttcttccctctcc 22871587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 27397022 - 27396905
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||||  ||   ||| ||||| |||||||||||||    
T  27397022 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatcattt 27396923  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  27396922 aaaatttcgtccctctcc 27396905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 5457334 - 5457222
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| ||| || |||| | ||  ||||| | ||||||||||||||||    
T  5457334 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcattt 5457235  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  5457234 aaaatttcgtccc 5457222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 42362451 - 42362558
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||| || |||| | ||  ||||| |||| | |||||||||||    
T  42362451 gcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcattt 42362550  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  42362551 aaaatttc 42362558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 19204490 - 19204596
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||| |||| ||| || | |||| ||  ||||| |||| |||||||||||||    
T  19204490 gcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatcattt 19204589  T
Q  387 aaaattt 393  Q
    |||||||    
T  19204590 aaaattt 19204596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 27992133 - 27992029
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 27992034  T
Q  389 aattt 393  Q
    |||||    
T  27992033 aattt 27992029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 13386174 - 13386063
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||||||||||| |||||||||| |||||||| | || |||||| |||| | ||  || || ||||||||||||||||||    
T  13386174 gcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaatcattt 13386075  T
Q  387 aaaatttcatcc 398  Q
    ||||||| ||||    
T  13386074 aaaattttatcc 13386063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 40380111 - 40380004
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||| | |||| | ||  || || ||||||  ||||||||||    
T  40380111 gcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcattaatcattt 40380012  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  40380011 aaaatttc 40380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 24389212 - 24389106
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||| |||| | ||  || |  ||||||  ||||||||||    
T  24389212 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcattgcaatcattaatcattt 24389113  T
Q  387 aaaattt 393  Q
    |||||||    
T  24389112 aaaattt 24389106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 397
Target Start/End: Original strand, 48788804 - 48788914
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  48788804 gcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 48788903  T
Q  387 aaaatttcatc 397  Q
    |||||||||||    
T  48788904 aaaatttcatc 48788914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 6253867 - 6253799
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| ||||    
T  6253867 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatcct 6253799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 10936221 - 10936114
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| || ||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  10936221 gcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 10936122  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  10936121 aaaatttc 10936114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 397
Target Start/End: Original strand, 27396630 - 27396740
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||| ||||||| | |||||||| ||||||||||||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  27396630 gcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 27396729  T
Q  387 aaaatttcatc 397  Q
    |||||||||||    
T  27396730 aaaatttcatc 27396740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 404
Target Start/End: Original strand, 40379774 - 40379887
Alignment:
Q  291 aaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| |||| | ||  ||||  || | |||||||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaaa 40379873  T
Q  391 tttcatcccactcc 404  Q
    |||| |||| ||||    
T  40379874 tttcgtccctctcc 40379887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 24388821 - 24388937
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||| | |||||||||| |||||||  |||| |||||| || ||| ||  ||||| || | |||||||||| |||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaatcactta 24388920  T
Q  388 aaatttcatcccactcc 404  Q
    ||||||| |||| ||||    
T  24388921 aaatttcgtccctctcc 24388937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 32298778 - 32298846
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||||||||||||||||||| |||||||||| | |||||| |||| |||||| ||||    
T  32298778 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgtattcgctaatcct 32298846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 42019598 - 42019666
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| ||||||||||||| | |||||||||| ||||||||||||| |||||| ||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcct 42019666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 28469011 - 28469118
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| | || |||||| || | | ||  || || ||||||  ||||||||||    
T  28469011 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaaactagccttgcaatcattaatcattt 28469110  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  28469111 aaaatttc 28469118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 20426757 - 20426651
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| |||||||||  |||||||||| |||||||| |||| |||||| |||||| |   |||||   ||| ||||||||||||    
T  20426757 gcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccctcacaaagtttaatcattt 20426658  T
Q  387 aaaattt 393  Q
    |||||||    
T  20426657 aaaattt 20426651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 17886917 - 17886805
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||||||  || |||||| |||| |||||||| ||| || |||| | ||  ||||| |||||   ||||||||||    
T  17886917 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatcattt 17886818  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  17886817 aaaatttcgtccc 17886805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 43266285 - 43266377
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatc 397  Q
    |||||||||||||| ||| |||||| ||| ||||||||| ||| || |||||  ||  ||||| |||| ||||||||||||||||||||||||    
T  43266285 tccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttcatc 43266377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 2640179 - 2640286
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||| |||||||| |||||||||| |||||| | |||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  2640179 gcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatcattaatcattt 2640278  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  2640279 aaaatttc 2640286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 16804054 - 16803967
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatt 392  Q
    |||||||||||||| |||||||||| |||||||| |||| |||| | |||| | ||  ||||| |||| |||||||||||||||||||    
T  16804054 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgcattgtttaatcatttaaaatt 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 32680973 - 32680874
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    |||||||||||||| |||||||||| ||| ||||||||| | |||| |||||| ||  || || ||||||  |||||||||||||||||| |||| ||||    
T  32680973 tccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctcc 32680874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 32934357 - 32934456
Alignment:
Q  295 atgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||| ||| ||||||||||||||||||| |||||| ||| |||  |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  32934357 atgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 32934456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 37656855 - 37656970
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| |||||||||||||||  ||||||||| |||||||  |||| |||||| |||| | ||  ||| | |||| |||||| | ||||||    
T  37656855 ttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcattgtttatttatttaa 37656954  T
Q  389 aatttcatcccactcc 404  Q
    |||||| |||| ||||    
T  37656955 aatttcgtccctctcc 37656970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 19204884 - 19204775
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    |||||||||| ||||||||||| |||||||| || ||||||| |||||| |||||| |||||| |||| | ||  || |  ||||||  ||||| |||||    
T  19204884 cttaaatatgaatttgatccttacaattaggggtggtttaaaaattggttcatgtaatcgctaatccttgcaaactagctttgcaatcattaattattta 19204785  T
Q  388 aaatttcatc 397  Q
    ||||||||||    
T  19204784 aaatttcatc 19204775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 32068115 - 32068204
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||  ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  32068115 tccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 32068204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 33828381 - 33828292
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||||||| |||||| ||| |||  |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  33828381 tccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 33828292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 42020022 - 42019917
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| || ||||||| |||||| | | || |||||| || ||| ||  ||| | |||| |||||||| ||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattatttaa 42019923  T
Q  389 aatttc 394  Q
    ||||||    
T  42019922 aatttc 42019917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 42618318 - 42618229
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| || | |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  42618318 tccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 42618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 43266673 - 43266584
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| ||||||||| |||||| | |||  ||  ||||| |||| |||||||||||||||||||||    
T  43266673 tccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatcatttaaaatttc 43266584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 2640598 - 2640498
Alignment:
Q  294 tatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    ||||||||| ||||||  ||||||| |||||||||| ||||| |  |||| |||||| | |||| ||  ||||| |||| ||||||||||||||||||||    
T  2640598 tatgtatttcatccttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaattt 2640499  T
Q  394 c 394  Q
    |    
T  2640498 c 2640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 18670290 - 18670234
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    |||||||||||||||| ||||||||||||||| |||||||||| | |||||| ||||    
T  18670290 gcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgta 18670234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 34799585 - 34799534
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    ||||||||||||||||||||| ||||| |||| |||||||||| ||||||||    
T  34799585 gcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtcc 34799534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 42731846 - 42731739
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||| ||||||| |||||||||| |||| ||| | ||  ||||| |||| | ||| || |  ||||||  ||||||||||    
T  42731846 gcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattgatccctatatccgctaatccttgcaagctagctttgcaattattaatcattt 42731747  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  42731746 aaaatttc 42731739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 18856059 - 18855969
Alignment:
Q  309 tgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatccc 399  Q
    |||||||||| ||| |||||| |||||||| |||| ||| || || ||| ||  ||||| ||||| |||||||||||||||||||| ||||    
T  18856059 tgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttcgtccc 18855969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 25628885 - 25628796
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| | ||| |||||| ||| ||| ||||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  25628885 tccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 25628796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 28105502 - 28105575
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaa 360  Q
    |||||||||||||||| ||||||||||||| | |||||||||| ||| |||| |||| || ||| |||| ||||    
T  28105502 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgtattcactaatccttgaaa 28105575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 28890598 - 28890687
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||  ||| |||||| ||| |||| |||| |||||| |||| | ||  ||||| |||| |||||||||||||||||||||    
T  28890598 tccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 28890687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 32068503 - 32068414
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| |||  ||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  32068503 tccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcatttaaaatttc 32068414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 42617930 - 42618019
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| | || |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  42617930 tccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 42618019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 37657264 - 37657208
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    |||||||||||||||| |||||||||||||||  ||||||||| |||| ||| ||||    
T  37657264 gcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccctgta 37657208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 43123176 - 43123232
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    ||||||||||||||||  ||| |||||||||| |||||||||| |||||||| ||||    
T  43123176 gcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgta 43123232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 394
Target Start/End: Original strand, 17885649 - 17885736
Alignment:
Q  307 cttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| |||||||||| |||||||| |||| || ||| |||| | ||  || || ||||||  ||||||||||||||||||    
T  17885649 cttgcaattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 17885736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 394
Target Start/End: Original strand, 25628499 - 25628586
Alignment:
Q  307 cttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| ||| |||||| ||| |||  |||| ||| || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  25628499 cttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttc 25628586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 29141603 - 29141556
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattg 334  Q
    |||||||||||||||| ||||||||||||||  |||||||||| ||||    
T  29141603 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 29144409 - 29144299
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcg-ctagtcctggaaaggtacccctgcaatgtttaatcatt 385  Q
    ||||||||||||||||  ||| |||||||||| |||||||||| |||||| ||| || |||  || |||| | ||  ||||  |||| ||||||||||||    
T  29144409 gcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt-catataatcgtttaatccttgcaacttacctttgcattgtttaatcatt 29144311  T
Q  386 taaaatttcatc 397  Q
    ||||||||||||    
T  29144310 taaaatttcatc 29144299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 33808324 - 33808431
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||| ||||| | |||||||||| |||||||  |||| |||||| |||| | ||  ||  | |||| | |||||||||||    
T  33808324 gcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatcattt 33808423  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  33808424 aaaatttc 33808431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 34793905 - 34793956
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    |||||||||||||||| |||| ||||| |||| |||||||||| ||||||||    
T  34793905 gcttaaatatgtattttatccctgcaaataggggtcgtttaaaaattggtcc 34793956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 47945362 - 47945465
Alignment:
Q  291 aaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||||||| ||| |||||||| ||  ||||||||| |||||| |||||| |||||| |||| | ||  || |  ||||||  ||||||||||||||    
T  47945362 aaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaa 47945461  T
Q  391 tttc 394  Q
    ||||    
T  47945462 tttc 47945465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 47950792 - 47950895
Alignment:
Q  291 aaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||||||| ||| |||||||| ||  ||||||||| |||||| |||||| |||||| |||| | ||  || |  ||||||  ||||||||||||||    
T  47950792 aaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaa 47950891  T
Q  391 tttc 394  Q
    ||||    
T  47950892 tttc 47950895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 18087765 - 18087659
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| |||  |||||||||||||| ||| |||||| |||||||  |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  18087765 gctttaatatgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcattt 18087666  T
Q  387 aaaattt 393  Q
    |||||||    
T  18087665 aaaattt 18087659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 397
Target Start/End: Complemental strand, 22828237 - 22828135
Alignment:
Q  295 atgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||| ||| ||||||| ||||||| ||| |||||| |||||||| |||| ||| || || ||  ||  |||||||||||   ||||||||||||||||||    
T  22828237 atgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgttaatcttgacaaattacccctgcaaaccttaatcatttaaaatttc 22828138  T
Q  395 atc 397  Q
    |||    
T  22828137 atc 22828135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 3914560 - 3914455
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||    ||||||||  |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  3914560 gcttaaatatgtatttcat----gcaattagaggtcgtttaaa-attggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 3914466  T
Q  387 aaaatttcatc 397  Q
    |||||||||||    
T  3914465 aaaatttcatc 3914455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 10600353 - 10600268
Alignment:
Q  308 ttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    ||||||||||| ||| |||||| ||| |||| |||| |||||| |||||  ||  ||||| |||| |||||||||||| |||||||    
T  10600353 ttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcattcaaaattt 10600268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 22081966 - 22081877
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| | ||| |||||| ||| ||   |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  22081966 tccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 22081877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 25453147 - 25453236
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| | || |||||| |||||  ||  ||||| |||| | |||||||||||||||||||    
T  25453147 tccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcatttaaaatttc 25453236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 27138348 - 27138259
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||| |||| ||| ||| |||||| ||| |||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  27138348 tcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 27138259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 32934755 - 32934666
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||  ||  ||| | | || |||||||||||||||||||||    
T  32934755 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttacattgtttaatcatttaaaatttc 32934666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 404
Target Start/End: Complemental strand, 48789154 - 48789113
Alignment:
Q  363 tacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    ||||| |||| |||||||||||||||||||||||||| ||||    
T  48789154 tacccttgcattgtttaatcatttaaaatttcatccctctcc 48789113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 18086290 - 18086346
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    |||| ||||||| |||  |||||||||||||| |||||||||| |||||||| ||||    
T  18086290 gctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgta 18086346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 8e-34; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 23613310 - 23613427
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||| || ||| ||  |||||||||| |||||||||||||    
T  23613310 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatcattt 23613409  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  23613410 aaaatttcgtccctctcc 23613427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 7451835 - 7451952
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||| || |||||| ||  |||||||||| |||||||||||||    
T  7451835 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatcattt 7451934  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  7451935 aaaatttcgtccctctcc 7451952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 13058038 - 13058155
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||  |||| |||||| |||||| ||  |||||||||| |||||||||||||    
T  13058038 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatcattt 13058137  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  13058138 aaaatttcgtccctctcc 13058155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 44967465 - 44967348
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||| |||| |||||| |||||| ||  |||||||||| |||||||||||||    
T  44967465 gcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 44967366  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  44967365 aaaatttcgtccctctcc 44967348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 5368948 - 5369054
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||| |||||| |||||| ||  |||||||||| |||||||||||||    
T  5368948 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 5369047  T
Q  387 aaaattt 393  Q
    |||||||    
T  5369048 aaaattt 5369054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 24711112 - 24711229
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||  |||| |||||||||||||    
T  24711112 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatcattt 24711211  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  24711212 aaaatttcgtccctctcc 24711229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 50419064 - 50418947
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| | || |||||| |||||| ||  ||||| |||| |||||||||||||    
T  50419064 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatcattt 50418965  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  50418964 aaaatttcgtccctctcc 50418947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 18831350 - 18831457
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  18831350 gcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcattt 18831449  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  18831450 aaaatttc 18831457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 36009241 - 36009123
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtg-tcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatt 385  Q
    |||||||||||||||||||||||| ||||||| | ||||||||| |||||||| |||| ||| || |||||||||  |||||||||| ||||||||||||    
T  36009241 gcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatcatt 36009142  T
Q  386 taaaatttcatcccactcc 404  Q
    ||||||||| |||| ||||    
T  36009141 taaaatttcgtccctctcc 36009123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 37248238 - 37248344
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| ||||||||||||||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 37248337  T
Q  388 aaatttc 394  Q
    |||||||    
T  37248338 aaatttc 37248344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 10781911 - 10781794
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  10781911 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 10781812  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  10781811 aaaatttcgtccctctcc 10781794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 34765807 - 34765690
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||| |||||| |||||| ||  ||||  |||| |||||||||||||    
T  34765807 gcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatcattt 34765708  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  34765707 aaaatttcgtccctctcc 34765690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 55867541 - 55867429
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| ||| || |||| | ||  ||||| |||| |||||||||||||    
T  55867541 gcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatcattt 55867442  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  55867441 aaaatttcgtccc 55867429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 10780714 - 10780825
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| | |||||| |||| | ||  || || ||||||  ||||||||||    
T  10780714 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcattt 10780813  T
Q  387 aaaatttcatcc 398  Q
    ||||||||||||    
T  10780814 aaaatttcatcc 10780825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 10974323 - 10974434
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| | |||||| |||| | ||  || || ||||||  ||||||||||    
T  10974323 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcattt 10974422  T
Q  387 aaaatttcatcc 398  Q
    ||||||||||||    
T  10974423 aaaatttcatcc 10974434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 24349675 - 24349792
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  24349675 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 24349774  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  24349775 aaaatttcgtccctctcc 24349792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 1179227 - 1179116
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  1179227 gcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 1179128  T
Q  387 aaaatttcatcc 398  Q
    ||||||||||||    
T  1179127 aaaatttcatcc 1179116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 14801737 - 14801854
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| |||||  ||  ||||| || | |||||||||||||    
T  14801737 gcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcattt 14801836  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  14801837 aaaatttcgtccctctcc 14801854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 43155923 - 43155806
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||  ||||||| |||||||||| |||||||| |||| ||| || |||||| ||  || ||||||| | |||||||||||    
T  43155923 gcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcattt 43155824  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  43155823 aaaatttcgtccctctcc 43155806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 24711507 - 24711400
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||  ||| || |||| | ||  || || ||||||  ||||||||||    
T  24711507 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatcattt 24711408  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  24711407 aaaatttc 24711400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 49879208 - 49879315
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| | |||| |||| | ||  || || ||||||  ||||||||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcattt 49879307  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  49879308 aaaatttc 49879315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 50418669 - 50418776
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||| || |||| | ||  || || ||||||  ||||||||||    
T  50418669 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatcattt 50418768  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  50418769 aaaatttc 50418776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 51692946 - 51692839
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  51692946 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 51692847  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  51692846 aaaatttc 51692839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 7452230 - 7452124
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||  |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  7452230 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 7452131  T
Q  387 aaaattt 393  Q
    |||||||    
T  7452130 aaaattt 7452124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 13058409 - 13058303
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  13058409 gcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 13058310  T
Q  387 aaaattt 393  Q
    |||||||    
T  13058309 aaaattt 13058303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 18831744 - 18831634
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| || | | ||  || || ||||||  ||||||||||    
T  18831744 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcattgcaaactaaccttgcaatcattaatcattt 18831645  T
Q  387 aaaatttcatc 397  Q
    |||||||||||    
T  18831644 aaaatttcatc 18831634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 51692554 - 51692671
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||  |||||||||| |||| || ||||| |||||| |||||  ||  ||||| |||| |||||||||| ||    
T  51692554 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcactt 51692653  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  51692654 aaaatttcgtccctctcc 51692671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 43155532 - 43155636
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcgttaatcatttaa 43155631  T
Q  389 aattt 393  Q
    |||||    
T  43155632 aattt 43155636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 24350859 - 24350752
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| || | |||||| |||| | ||  || |  ||||||  ||||||||||    
T  24350859 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatcattaatcattt 24350760  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  24350759 aaaatttc 24350752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 35028425 - 35028318
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| ||  |||||| |||||||||| |  |||||| |||| | ||  ||||| |||| |||||||||||||    
T  35028425 gcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatcattt 35028326  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  35028325 aaaatttc 35028318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 52909254 - 52909361
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||||||||||| |||||| ||| |||||||  |||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 52909353  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  52909354 aaaatttc 52909361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 37248630 - 37248564
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| ||||    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcct 37248564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 49879596 - 49879486
Alignment:
Q  294 tatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    ||||||||||||||||||||||||| |||||||||| | || ||  |||| |||||| |||||  ||  ||||| |||| ||||||||||||||||||||    
T  49879596 tatgtatttgatccttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 49879497  T
Q  394 catcccactcc 404  Q
    | |||| ||||    
T  49879496 cgtccctctcc 49879486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 35028001 - 35028106
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||| | |||| |||||| |||| | ||  || || ||||||  ||||||||||||    
T  35028001 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 35028100  T
Q  389 aatttc 394  Q
    ||||||    
T  35028101 aatttc 35028106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 44967071 - 44967176
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||  |||| |||||| ||||   ||  || || ||||||  |||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttacaaactagccttgcaatcattaatcattta 44967170  T
Q  388 aaattt 393  Q
    ||||||    
T  44967171 aaattt 44967176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 404
Target Start/End: Complemental strand, 17356348 - 17356232
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| |||||| |||||| | |||||||||| |||||||| |||| |||||| || ||| ||  ||| | |||| ||||| ||||||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcattta 17356249  T
Q  388 aaatttcatcccactcc 404  Q
    ||||||| |||| ||||    
T  17356248 aaatttcgtccctctcc 17356232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 23613705 - 23613637
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||| |||||| ||||    
T  23613705 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatcct 23613637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 34765381 - 34765488
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| | |||||||||| || ||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  34765381 gcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 34765480  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  34765481 aaaatttc 34765488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 46661341 - 46661234
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |  ||| |||| | ||  || || ||||||  ||||||||||    
T  46661341 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatcattt 46661242  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  46661241 aaaatttc 46661234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 394
Target Start/End: Complemental strand, 15508098 - 15507993
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||| |||| |||| |||||| |||||  ||  ||||  ||||  |||||||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcattta 15508000  T
Q  388 aaatttc 394  Q
    |||||||    
T  15507999 aaatttc 15507993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 36008845 - 36008951
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||| |||||||  ||||||||| |||||||| |||| |||||| || | | ||  || || ||||||  ||||||||||    
T  36008845 gcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaatcattgcaaactagccttgcaatcattaatcattt 36008944  T
Q  387 aaaattt 393  Q
    |||||||    
T  36008945 aaaattt 36008951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 48528486 - 48528536
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtc 337  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  48528486 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtc 48528536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 394
Target Start/End: Complemental strand, 54087121 - 54087015
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||| ||| ||||||| |||||||||| |||||||| |||| ||| || || ||  ||  ||||| |||| ||||||||||||||    
T  54087121 cttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcattta 54087022  T
Q  388 aaatttc 394  Q
    |||||||    
T  54087021 aaatttc 54087015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 3032601 - 3032690
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  3032601 tccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 3032690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 10408296 - 10408207
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  10408296 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10408207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 24411360 - 24411461
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||| ||||||||| || ||||||| |||||||| |||| ||||||  ||||  ||  ||||| |||| ||||||||||||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcattta 24411459  T
Q  388 aa 389  Q
    ||    
T  24411460 aa 24411461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 54858967 - 54858878
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| ||||||||| ||| || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  54858967 tccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 54858878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 53701814 - 53701930
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||| ||||| ||||||||||||||| |||||||||| |||| ||  |||| || ||| |||||  ||  || || |||| ||||||||||||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcattta 53701913  T
Q  388 aaatttcatcccactcc 404  Q
    ||||||| |||| ||||    
T  53701914 aaatttcttccctctcc 53701930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 54086698 - 54086802
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| ||||  |||| ||  | || |||  ||||||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttcaaagctagtcttgtaatcattaatcatttaa 54086797  T
Q  389 aattt 393  Q
    |||||    
T  54086798 aattt 54086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 9400897 - 9400798
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    |||||||||||||| |||||||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  ||||||||||||||||||||||| ||||    
T  9400897 tccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctctcc 9400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 11448156 - 11448049
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||  ||| || ||||||| |||||||||| |||| ||  |||| |||||| |||| | ||  ||||| |||| |||||||||||||    
T  11448156 gcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcattt 11448057  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  11448056 aaaatttc 11448049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 355
Target Start/End: Complemental strand, 16006219 - 16006152
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||||| |||||||||||| |||||||||| |||||||  |||| |||||| ||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcct 16006152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 39539345 - 39539238
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| | |||||||||| ||||||| ||||| ||| || | || | ||  || || |||| | |||||||||||    
T  39539345 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatcattt 39539246  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  39539245 aaaatttc 39539238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 404
Target Start/End: Original strand, 16005843 - 16005956
Alignment:
Q  291 aaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||||||||||||||  ||||||| |||||||||| |||  ||| |||| |||||| | |||| ||  || || || | |||||||||||||||||    
T  16005843 aaatatgtatttgatccttataattaggggtcgtttaaaaattaatccctgtaatcgctaattctggcaatttatccatgtattgtttaatcatttaaaa 16005942  T
Q  391 tttcatcccactcc 404  Q
    |||| |||| ||||    
T  16005943 tttcgtccctctcc 16005956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 17355926 - 17355975
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggt 336  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  17355926 gcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggt 17355975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 27068929 - 27069018
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||||||||  || |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  27068929 tccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 27069018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 27069317 - 27069228
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| | |||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  27069317 tccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 27069228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 45463092 - 45463181
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||  |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  45463092 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 45463181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 53129933 - 53129816
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| |||| |||  ||| |||||| |||| | ||  |||||  ||| ||||| ||| |||    
T  53129933 gcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatcgttt 53129834  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  53129833 aaaatttcgtccctctcc 53129816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 54858579 - 54858668
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  54858579 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 54858668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 147320 - 147388
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| |||| | |||||||| |||||||||| |||||||| |||| |||||| ||||    
T  147320 gcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 147388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 11108265 - 11108161
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| |||||||||||||||  ||||||||| |||| ||| |||| |||||| |||| | ||  ||  | ||||||  ||||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccttgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaa 11108166  T
Q  389 aattt 393  Q
    |||||    
T  11108165 aattt 11108161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 15507674 - 15507742
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||||||| | || |||||| ||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatcct 15507742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 24411775 - 24411707
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||| ||| |||| |||||| ||||    
T  24411775 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccctgtattcgctaatcct 24411707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 45463480 - 45463392
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    |||||||||||||| ||| |||||| ||| |||| |||| | |||| |||||| ||  ||||| |||| ||||||||||||||||||||    
T  45463480 tccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgcattgtttaatcatttaaaattt 45463392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 54435524 - 54435468
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    ||||||||||||||||  | ||||||||||||||||||||||| |||| ||||||||    
T  54435524 gcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattgatccatgta 54435468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 148182 - 148131
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    |||||||||||||||| |||| |||||||||| |||||||||| ||||||||    
T  148182 gcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtcc 148131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 404
Target Start/End: Original strand, 27934551 - 27934650
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    |||||||||||||| |||||||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  |||||||||||||||||| |||| ||||    
T  27934551 tccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctcc 27934650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 35508667 - 35508560
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| |||  ||| |||| ||| || | ||   ||  ||||| |||| |||||||||||||    
T  35508667 gcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatcattt 35508568  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  35508567 aaaatttc 35508560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 37976580 - 37976473
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| | ||||||||| |||||||||| |||| ||| |||| |||||| | |||  ||  || |  |||| |||||||||||||    
T  37976580 gcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatcattt 37976481  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  37976480 aaaatttc 37976473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 40387468 - 40387575
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| ||| |||| |||||||||| | | |||||| |||||||| |||| |||||| |||||| ||  | |||||||||   ||||||||||    
T  40387468 gctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcattt 40387567  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  40387568 aaaatttc 40387575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 52909680 - 52909573
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| |  || |||||| ||||||| ||||| |||||| |||| | ||  || || ||||||  ||||| ||||    
T  52909680 gcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatcattaattattt 52909581  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  52909580 aaaatttc 52909573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 5369294 - 5369188
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||  || |||| |||||||||| |||||||| || | ||| || |||| | ||  || || ||||||  ||||||||||    
T  5369294 gcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctgcattcgttaatccttgcaaactagccttgcaatcattaatcattt 5369195  T
Q  387 aaaattt 393  Q
    |||||||    
T  5369194 aaaattt 5369188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 10407908 - 10407997
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| |||  ||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  10407908 tccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 10407997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 11523968 - 11524057
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||  |||| ||| || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  11523968 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcatttaaaatttc 11524057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 27149402 - 27149314
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| | |||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  27149402 tccttgcaattaggcgtcatttaaa-attagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 27149314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 39667183 - 39667094
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||| ||||| | ||| |||||| |||||||| |||| ||| || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  39667183 tccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaaaatttc 39667094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 50750910 - 50750991
Alignment:
Q  309 tgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||||| |||||||||| ||| |||| |||| |||||| |||||| ||  || || |||| |||||||||||||||||    
T  50750910 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaa 50750991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 1178058 - 1178125
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| ||||||| ||||||  |||||||||| |||||| |||||| |||||| ||||    
T  1178058 gcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattggt-catgtattcgctaatcct 1178125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 9400538 - 9400626
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    |||||||||||||||||| |||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  |||||||||||||||||    
T  9400538 tccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaattt 9400626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 14802162 - 14802099
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgcta 350  Q
    |||||||||| ||||| ||||||||||||||   ||||||||| |||||||| |||| ||||||    
T  14802162 gcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgcta 14802099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 33247651 - 33247552
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    ||||||||||||||  ||||||||| ||  |||| |||| | |||| |||||| ||  || || ||||||  ||||||||||||||||||||||| ||||    
T  33247651 tccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcatccctctcc 33247552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 52573635 - 52573548
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatt 392  Q
    |||||||||||||| ||| |||||| ||| ||||||||| || ||| |||| | ||  ||||  |||| |||||||||||||||||||    
T  52573635 tccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgcattgtttaatcatttaaaatt 52573548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 398
Target Start/End: Complemental strand, 5818175 - 5818089
Alignment:
Q  312 aattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcc 398  Q
    ||||||| ||| |||||| ||| |||| |||| ||| || |||||  ||  ||||| |||| |||||||||||||||||||||||||    
T  5818175 aattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatcatttaaaatttcatcc 5818089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 22717958 - 22718047
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||| |||||||  ||| |||||| ||| ||||||||| |||||| |||||  ||  ||||| |||  |||||||||||||||||||||    
T  22717958 tccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaaaatttc 22718047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 22987258 - 22987169
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||| |||||||  ||| |||||| ||| ||||||||| |||||| |||||  ||  ||||| |||  |||||||||||||||||||||    
T  22987258 tccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaaaatttc 22987169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 32063763 - 32063658
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| |||||||||||  ||| |||||||||| ||| |||||| ||||||   |||| ||| || | |||| ||  ||||| ||||| ||||||||||||    
T  32063763 gctttaatatgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatcattt 32063664  T
Q  387 aaaatt 392  Q
    ||||||    
T  32063663 aaaatt 32063658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 33247292 - 33247377
Alignment:
Q  304 atccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaa 389  Q
    ||||||||||||||||||| |||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  |||||||||||||    
T  33247292 atccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaa 33247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 37976156 - 37976217
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgcta 350  Q
    |||||||||||||| ||||||||||||||  |||||||||| | |||| | |||| ||||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgtattcgcta 37976217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 55866112 - 55866161
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggt 336  Q
    ||||||||||||||||  ||| |||||||||| |||||||||| ||||||    
T  55866112 gcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt 55866161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 41582448 - 41582560
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| ||| |||| |||||| ||| ||| |||||| |||||||| | || ||| || |||||| ||  | |||||||||   ||||||||||    
T  41582448 gctttaatatgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatcattt 41582547  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  41582548 aaaatttcgtccc 41582560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 41583658 - 41583546
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| ||| |||| |||||||||| ||| |||||| |||| |   |||| |||||| |||||| ||  | |||||||||   ||||||||||    
T  41583658 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcattt 41583559  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  41583558 aaaatttcgtccc 41583546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 319
Target Start/End: Original strand, 54713617 - 54713649
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggt 319  Q
    |||||||||||||||| ||||||||||||||||    
T  54713617 gcttaaatatgtatttcatccttgcaattaggt 54713649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 78)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 11761750 - 11761857
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  |||||||||| |||||||||||||    
T  11761750 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 11761849  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  11761850 aaaatttc 11761857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 27587149 - 27587266
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||||||||  ||||||||||||    
T  27587149 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatcattt 27587248  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  27587249 aaaatttcgtccctctcc 27587266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 3529269 - 3529152
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||| || |||||| ||  ||||||| || |||||||||||||    
T  3529269 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcattt 3529170  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  3529169 aaaatttcgtccctctcc 3529152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 24547552 - 24547435
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| | || |||||| |||||| ||  ||||| |||| |||||||||||||    
T  24547552 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatcattt 24547453  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  24547452 aaaatttcgtccctctcc 24547435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 28771265 - 28771148
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |||||| || ||| ||  |||||||| | |||||||||||||    
T  28771265 gcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcattt 28771166  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  28771165 aaaatttcgtccctctcc 28771148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 5993890 - 5994007
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| | |||| ||  ||||| |||| |||||||||||||    
T  5993890 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 5993989  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  5993990 aaaatttcgtccctctcc 5994007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 39453302 - 39453418
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| |||||| ||  ||||| |||| ||||||||||||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 39453401  T
Q  388 aaatttcatcccactcc 404  Q
    ||||||| |||| ||||    
T  39453402 aaatttcgtccctctcc 39453418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 35512151 - 35512266
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||| | |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||    
T  35512151 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 35512250  T
Q  389 aatttcatcccactcc 404  Q
    |||||| |||| ||||    
T  35512251 aatttcgtccctctcc 35512266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 13962865 - 13962982
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||| ||||| ||||||||||||||| |||||||||| |||||||| |||| | |||| |||||| ||  ||||| |||| |||||||||||||    
T  13962865 gcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcattt 13962964  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  13962965 aaaatttcgtccctctcc 13962982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 38475426 - 38475309
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||| ||| || |||||  ||  ||||| |||| |||||||||||||    
T  38475426 gcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcattt 38475327  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  38475326 aaaatttcgtccctctcc 38475309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 11762144 - 11762038
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  11762144 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 11762045  T
Q  387 aaaattt 393  Q
    |||||||    
T  11762044 aaaattt 11762038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 27587542 - 27587436
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  27587542 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 27587443  T
Q  387 aaaattt 393  Q
    |||||||    
T  27587442 aaaattt 27587436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 13362653 - 13362549
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||| ||||||||||| |||||||||| |||||||| |||| |||||| || ||| ||  ||||| |||| |||||||||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaa 13362554  T
Q  389 aattt 393  Q
    |||||    
T  13362553 aattt 13362549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 3528874 - 3528980
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| | |||| |||| | ||  || || ||||||  ||||||||||    
T  3528874 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatcattt 3528973  T
Q  387 aaaattt 393  Q
    |||||||    
T  3528974 aaaattt 3528980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 16157282 - 16157176
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| | || ||| || |||||  ||  ||||| |||| |||||||||||||    
T  16157282 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcattt 16157183  T
Q  387 aaaattt 393  Q
    |||||||    
T  16157182 aaaattt 16157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 18247087 - 18247202
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||| |  ||| ||  ||||| |||| | |||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcattatttaatcattt 18247184  T
Q  387 aaaatttcatcccactcc 404  Q
    | |||||| |||| ||||    
T  18247185 agaatttcgtccctctcc 18247202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 20814562 - 20814456
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| |||| | ||  ||| | |||| |||||||||||||    
T  20814562 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatcattt 20814463  T
Q  387 aaaattt 393  Q
    |||||||    
T  20814462 aaaattt 20814456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 5024443 - 5024338
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| |||||  ||  ||||  |||| |||||||||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaa 5024344  T
Q  389 aatttc 394  Q
    ||||||    
T  5024343 aatttc 5024338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 6150455 - 6150572
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||| || ||| |||||  ||  ||  | |||| |||||||||||||    
T  6150455 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatcattt 6150554  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  6150555 aaaatttcgtccctctcc 6150572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 28770870 - 28770938
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| ||||    
T  28770870 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 28770938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 14194424 - 14194531
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  14194424 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 14194523  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  14194524 aaaatttc 14194531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 32242245 - 32242360
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||| ||| |||| | |||| || ||| ||  ||| | |||| |||||||||||||||    
T  32242245 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaa 32242344  T
Q  389 aatttcatcccactcc 404  Q
    |||||| |||| ||||    
T  32242345 aatttcgtccctctcc 32242360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 16082979 - 16083085
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| |||||| |||||||| || ||||||| ||| |||| |||| ||| || |||||| ||  ||||| |||| ||||||||||||||    
T  16082979 cttaaatatgtatttcatccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcattta 16083078  T
Q  388 aaatttc 394  Q
    |||||||    
T  16083079 aaatttc 16083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 19892310 - 19892416
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| ||| || |||| | ||  || || || |||  |||||||||||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcattta 19892409  T
Q  388 aaatttc 394  Q
    |||||||    
T  19892410 aaatttc 19892416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 20840534 - 20840640
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||| | |||| ||| || |||| | ||  ||||| |||| |||||||| ||||    
T  20840534 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatgattt 20840633  T
Q  387 aaaattt 393  Q
    |||||||    
T  20840634 aaaattt 20840640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 394
Target Start/End: Complemental strand, 35512540 - 35512434
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||| | |||| | ||  || || ||||||  |||||||||||    
T  35512540 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatcattaatcattta 35512441  T
Q  388 aaatttc 394  Q
    |||||||    
T  35512440 aaatttc 35512434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 17202400 - 17202517
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||| ||||| |||||| |||||||| |||||||||| |||||||  |||| |||||| |||||  ||  ||||| |||| ||||||| |||||    
T  17202400 gcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcattt 17202499  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  17202500 aaaatttcgtccccctcc 17202517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 18670203 - 18670307
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||| |||| |||||||||| |||||||| |||| |||||| ||   | ||  ||||| |||| |||||||||||||    
T  18670203 gcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc---gcaatttacccttgcattgtttaatcattt 18670299  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  18670300 aaaatttc 18670307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 35920611 - 35920494
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| | ||||||||| |||||||||| |||||||| |||| |||||| |||||  ||  || || | || |||||||||||||    
T  35920611 gcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcattt 35920512  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  35920511 aaaatttcgtccctctcc 35920494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 11740690 - 11740794
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||| ||||| || |||||| |||| | ||  || || |||| | |||||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgcattctttaatcatttaa 11740789  T
Q  389 aattt 393  Q
    |||||    
T  11740790 aattt 11740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 6150847 - 6150740
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||| ||| || || | | ||  || || ||||||  ||||||||||    
T  6150847 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatcattt 6150748  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  6150747 aaaatttc 6150740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 17202826 - 17202719
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| || ||||| |||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  17202826 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 17202727  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  17202726 aaaatttc 17202719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 28269423 - 28269530
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| ||||||||  ||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  28269423 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcattaatcattt 28269522  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  28269523 aaaatttc 28269530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 29646363 - 29646474
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||| ||||||| ||| |||||| ||||||||||||| |||||| |||| | ||  || || | ||||  ||||||||||    
T  29646363 gcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcattaatcattt 29646462  T
Q  387 aaaatttcatcc 398  Q
    ||||||| ||||    
T  29646463 aaaattttatcc 29646474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 39453726 - 39453619
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| |||||||| |||| |||||| || | | ||  || || ||||||  ||||||||||    
T  39453726 gcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatcattt 39453627  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  39453626 aaaatttc 39453619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 5024020 - 5024126
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||| | |||||| |||||| |||| | ||  || || ||||||   |||||||||    
T  5024020 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatccttgcaaactagccttgcaatcactaatcattt 5024119  T
Q  387 aaaattt 393  Q
    |||||||    
T  5024120 aaaattt 5024126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 19518034 - 19517928
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| || ||||||| ||| ||||||||| |||||| || | | ||  || || ||||||  ||||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatcattaatcattt 19517935  T
Q  387 aaaattt 393  Q
    |||||||    
T  19517934 aaaattt 19517928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 394
Target Start/End: Complemental strand, 19892734 - 19892628
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||||  |||||||||| |||||||  |||| ||| || ||||   ||  ||||| |||| ||||||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcattta 19892635  T
Q  388 aaatttc 394  Q
    |||||||    
T  19892634 aaatttc 19892628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 404
Target Start/End: Complemental strand, 29646777 - 29646672
Alignment:
Q  298 tatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatc 397  Q
    ||||| ||||||| ||||||| |||||||||| |||||| |||||| |||||| |||||  ||  ||||| |||| ||||||||||||||||||||| ||    
T  29646777 tatttcatccttgtaattaggagtcgtttaaa-attggtgcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 29646679  T
Q  398 ccactcc 404  Q
    || ||||    
T  29646678 cctctcc 29646672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 14194849 - 14194733
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||| |||| ||| ||||||| ||||||| |||||||||| ||||| ||||||| |  ||| |||||| ||  ||||| |||| |||||||||||||    
T  14194849 gcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattgg-ccatgtaattactaatcctggcaatttacccttgcattgtttaatcattt 14194751  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  14194750 aaaatttcgtccctctcc 14194733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 42265736 - 42265841
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| |||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || |||| | |||||| ||||    
T  42265736 gcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcattctttaatgattt 42265835  T
Q  387 aaaatt 392  Q
    ||||||    
T  42265836 aaaatt 42265841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 43159239 - 43159134
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| ||||   ||  || || ||||||  ||||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcattaatcatttaa 43159140  T
Q  389 aatttc 394  Q
    ||||||    
T  43159139 aatttc 43159134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 24547178 - 24547246
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    ||||||||||||| |||||||||||||||||| |||||| ||| |||||||| |||| |||||| ||||    
T  24547178 gcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcct 24547246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 394
Target Start/End: Original strand, 35920228 - 35920336
Alignment:
Q  286 cgcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatt 385  Q
    ||||||||||||||||||||| ||  |||||||  ||||||||| ||||||| ||||| |||||| |||| | ||  || || ||||||  |||||||||    
T  35920228 cgcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcatt 35920327  T
Q  386 taaaatttc 394  Q
    |||||||||    
T  35920328 taaaatttc 35920336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 186846 - 186739
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||  |||||||||| |||||||| |||| | |||| || | | ||  || || ||||||  ||||||||||    
T  186846 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcattt 186747  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  186746 aaaatttc 186739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 394
Target Start/End: Complemental strand, 8322827 - 8322724
Alignment:
Q  291 aaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||  ||| ||| || |||| | ||  || || ||||||  ||||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaa 8322728  T
Q  391 tttc 394  Q
    ||||    
T  8322727 tttc 8322724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 16156856 - 16156963
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||||||||||| |||||||||| ||||||| ||||| ||| || |||| | ||  ||  | ||||||  ||||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcattt 16156955  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  16156956 aaaatttc 16156963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 32242668 - 32242563
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| || ||||||| ||| |||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  32242668 gcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtcc-tgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 32242570  T
Q  387 aaaattt 393  Q
    |||||||    
T  32242569 aaaattt 32242563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 11047861 - 11047757
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| |||||||||| |||| |||||||||| |||||| |||||| || ||| |||| | ||  || || ||||||  ||||||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggt-catgtattcactaatccttgcaaactagccttgcaatcattaatcatttaa 11047763  T
Q  389 aatttc 394  Q
    ||||||    
T  11047762 aatttc 11047757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 33871358 - 33871447
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| ||||| |||||| ||| |||| |||| |||||| | |||| ||  ||||| |||| |||||||||||||||||||||    
T  33871358 tccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 33871447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 18247503 - 18247435
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| ||||||||||||||| ||||||||||  ||||||  |||| |||||| ||||    
T  18247503 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggtctctgtattcgctaatcct 18247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 21265569 - 21265461
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctgg-aaaggtacccctgcaatgtttaatcatt 385  Q
    |||||||||||||||| |||||| |||||| | |||||||||| |||||| | |||| |||||| || ||| ||   ||||| |||| |||||||| |||    
T  21265569 gcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgtaatcgctaatcgtggcaattttacccttgcattgtttaattatt 21265470  T
Q  386 taaaatttc 394  Q
    |||||||||    
T  21265469 taaaatttc 21265461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 24141453 - 24141565
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| |||  ||| |||||||||  ||| |||||| |||||||| |||| ||| || |||||| ||  || || ||||| ||||||||||||    
T  24141453 gctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcattt 24141552  T
Q  387 aaaatttcatccc 399  Q
    |||||||||||||    
T  24141553 aaaatttcatccc 24141565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 5835851 - 5835748
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| || ||||||| ||||||   |||| |||||| |||| | ||  || || |||||  |||||||||||||    
T  5835851 ttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaacatttaatcatttaa 5835752  T
Q  389 aatt 392  Q
    ||||    
T  5835751 aatt 5835748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 16083370 - 16083263
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| |  ||||||||| |||||| ||| || |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  16083370 gcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggttcatatattcgctaatccttgcaaactagtcttgcaatcattaatcattt 16083271  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  16083270 aaaatttc 16083263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 404
Target Start/End: Original strand, 38442075 - 38442186
Alignment:
Q  293 atatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatt 392  Q
    |||||||||| ||| ||||||||||| ||  |||||| |||||||  |||| |||||| |||||  ||  ||| | |||| |||||||||||||||||||    
T  38442075 atatgtatttcatcgttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatt 38442174  T
Q  393 tcatcccactcc 404  Q
    || |||| ||||    
T  38442175 tcgtccctctcc 38442186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 38442494 - 38442387
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| || ||| | |||| ||| || |||| | ||  || || ||||||  |||| |||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaaactagccttgcaatcattaaccattt 38442395  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  38442394 aaaatttc 38442387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 38475034 - 38475141
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| | |||||||   ||| |||||| ||||||||||||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  38475034 gcttaaatatgtatttcatcatagcaattaaaggtcatttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcattt 38475133  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  38475134 aaaatttc 38475141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 398
Target Start/End: Original strand, 22298564 - 22298654
Alignment:
Q  308 ttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcc 398  Q
    ||||||||||| ||| |||||| ||| ||||||||| |||||| ||  || ||  ||||| | || |||||||||||||||||||||||||    
T  22298564 ttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcggggcaatttacccttacattgtttaatcatttaaaatttcatcc 22298654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 11047439 - 11047545
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtc-gtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatt 385  Q
    |||||||||||||||| | ||||||||||||| ||| ||||||| ||||  ||  ||| |||||| || ||| ||  ||||| |||| ||||||||||||    
T  11047439 gcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaattgtccc--gtaatcgctaatcttggcaatttacccttgcattgtttaatcatt 11047536  T
Q  386 taaaatttc 394  Q
    |||||||||    
T  11047537 taaaatttc 11047545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 20152804 - 20152889
Alignment:
Q  309 tgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||| | ||| |||||| ||| |||  |||| |||||| |||||||||  ||||| |||| |||||||||||||||||||||    
T  20152804 tgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatcatttaaaatttc 20152889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 20840864 - 20840815
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggt 336  Q
    |||||||||||||||| |||||| |||||||| |||||||||| ||||||    
T  20840864 gcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggt 20840815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 186421 - 186532
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||| ||||| ||| ||| ||||||| |||||||||| ||| |||  |||| ||| || | |||||||  || || |||| |||||||||||||    
T  186421 gcttaaatatttatttcatc-ttgaaattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaatcattt 186519  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  186520 aaaatttcgtccc 186532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 6301968 - 6301863
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||  ||||||||||| |||||||||| |||||||| |||| ||| || |||| | ||  ||  | ||||||  ||||||||||    
T  6301968 gcttaaatatgtatttcat--ttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaactagtcttgcaatcattaatcattt 6301871  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  6301870 aaaatttc 6301863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 17544455 - 17544367
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    |||||||||||||| ||| |||||| ||| || | |||| ||| || |||||| ||  ||||| |||| ||||||||||||||||||||    
T  17544455 tccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaattt 17544367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 394
Target Start/End: Complemental strand, 5994304 - 5994209
Alignment:
Q  299 atttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||| ||||||||||||| | |||||||||| |||||| |||||| |||||| |||| | ||  ||  | ||||||  ||||||||||||||||||    
T  5994304 atttcatccttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttc 5994209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 11741944 - 11741837
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||| ||||||| ||| |||||| || ||||  |||| |||||| || | | ||  || || |||| | |||||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcattt 11741845  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  11741844 aaaatttc 11741837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 13963256 - 13963149
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||| ||||| ||||||| ||||| | |||||||||| ||||||| ||||| ||| || |||| | ||  ||  | ||||||  ||||||||||    
T  13963256 gcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcattt 13963157  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  13963156 aaaatttc 13963149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 37991200 - 37991307
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||| | || |||| |||||||||| |||||||||| |||||||| |||| ||| || |||| | ||  || || ||||||  ||||||||||    
T  37991200 gcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccttgcaatcattaatcattt 37991299  T
Q  387 aaaatttc 394  Q
     |||||||    
T  37991300 caaatttc 37991307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 404
Target Start/End: Original strand, 41930535 - 41930634
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    |||||||||||||  |||||||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  |||||||||||||||||| |||| ||||    
T  41930535 tccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctcc 41930634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 42067951 - 42067844
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| ||| |||| |||||||||| ||| ||||||  ||||||| |||| | | || |||||| ||  | |||||||||  |||||||||||    
T  42067951 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgataatcctggcaaactgcccctgcaaactttaatcattt 42067852  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  42067851 aaaatttc 42067844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 20814137 - 20814187
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtc 337  Q
    |||||||||||||||| |||||| |||||||  |||||||||| |||||||    
T  20814137 gcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggtc 20814187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 21257586 - 21257540
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattgg 335  Q
    |||||||||||||| |||| |||||||||| |||||||||| |||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattgg 21257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 8875468 - 8875557
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| | ||| |||||| ||| |||| |||| ||| || |||||| ||  ||| | |||| |||||||||||||||||||||    
T  8875468 tccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatttaaaatttc 8875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 21288064 - 21287975
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||| ||||||  |||||||||| |||  |||||||| |||||| || ||| ||   |||| |||| |||||||||||||||||||||    
T  21288064 tccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatcatggcaatacacccttgcattgtttaatcatttaaaatttc 21287975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 27937424 - 27937379
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattg 334  Q
    |||||||||||||| ||||||||||||| | |||||||||| ||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 37992714 - 37992673
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaa 329  Q
    ||||||||||||||| |||| |||||||||| ||||||||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaa 37992673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 388
Target Start/End: Complemental strand, 40150241 - 40150140
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| |||  |||||||||||||| ||| ||| || |||||||| |||| ||| || |||| ||||  ||||| | ||| ||||||||||||    
T  40150241 gctttaatatgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctttcaaagtttaatcattt 40150142  T
Q  387 aa 388  Q
    ||    
T  40150141 aa 40150140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 11163450 - 11163333
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  |||| ||||| |||||||||||||    
T  11163450 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatcattt 11163351  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  11163350 aaaatttcgtccctctcc 11163333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 45556113 - 45556219
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||| |||||| |||||| ||  || ||||||| |||||||||||||    
T  45556113 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatcattt 45556212  T
Q  387 aaaattt 393  Q
    |||||||    
T  45556213 aaaattt 45556219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 6657879 - 6657996
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||||||| || |||||||||| |||||||| |||| || ||| || ||| ||  |||||||||| |||||||||||||    
T  6657879 gcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatcattt 6657978  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  6657979 aaaatttcgtccctctcc 6657996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 15848089 - 15848206
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  15848089 gcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcattt 15848188  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  15848189 aaaatttcgtccctctcc 15848206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 16099056 - 16099173
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||| |||||||||||| ||| |||||| |||||||| |||| || ||| |||||| ||  |||||||||| |||||||||||||    
T  16099056 gcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcattt 16099155  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  16099156 aaaatttcgtccctctcc 16099173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 25231275 - 25231163
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||| |||||| |||| | ||  ||||| |||||  |||||||||||    
T  25231275 gcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatcattt 25231176  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  25231175 aaaatttcgtccc 25231163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 293 - 404
Target Start/End: Original strand, 39498317 - 39498428
Alignment:
Q  293 atatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatt 392  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||| |||| ||| || |||||| ||  ||||||| || |||||||||||||||||||    
T  39498317 atatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatt 39498416  T
Q  393 tcatcccactcc 404  Q
    || |||| ||||    
T  39498417 tcgtccctctcc 39498428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 39498706 - 39498595
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  39498706 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 39498607  T
Q  387 aaaatttcatcc 398  Q
    ||||||| ||||    
T  39498606 aaaatttaatcc 39498595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 2318160 - 2318276
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| || ||||||| ||||||| ||||| |||||| | |||| ||  ||||| |||| |||||||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaattagg-gtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 2318258  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  2318259 aaaatttcgtccctctcc 2318276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 6588686 - 6588791
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||| |||| | ||  || || |||| | |||||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaa 6588785  T
Q  389 aatttc 394  Q
    ||||||    
T  6588786 aatttc 6588791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 36382162 - 36382279
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||| ||||||||| |||||||||||||||  ||||||||| |||||||| | || |||||| |||||  ||  ||||| |||| |||||||||||||    
T  36382162 gcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatcattt 36382261  T
Q  387 aaaatttcatcccactcc 404  Q
    ||||||||||||| ||||    
T  36382262 aaaatttcatccctctcc 36382279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 37895348 - 37895459
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  37895348 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 37895447  T
Q  387 aaaatttcatcc 398  Q
    ||||||||||||    
T  37895448 aaaatttcatcc 37895459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 16099451 - 16099345
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| || ||| |||| | ||  || || ||||||  ||||||||||    
T  16099451 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcattt 16099352  T
Q  387 aaaattt 393  Q
    |||||||    
T  16099351 aaaattt 16099345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 44045429 - 44045323
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  44045429 gcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 44045330  T
Q  387 aaaattt 393  Q
    |||||||    
T  44045329 aaaattt 44045323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 44714187 - 44714071
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||| ||| ||||||||||||||| |||||||||| ||| |||| |||| | |||| |||||| ||  ||||| |||| |||||||||||||    
T  44714187 gcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcattt 44714089  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  44714088 aaaatttcgtccctctcc 44714071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 10712725 - 10712841
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||| ||||||||| |||||||||||||||  ||||||||| |||||||| | || ||  || |||||| ||  ||||| |||| ||||||||||||||    
T  10712725 cttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcattta 10712824  T
Q  388 aaatttcatcccactcc 404  Q
    |||||||||||| ||||    
T  10712825 aaatttcatccctctcc 10712841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 36479719 - 36479826
Alignment:
Q  288 cttaaatatgtatttgatcctt-gcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||| |||||| || | | |   ||||| |||| |||||||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcattt 36479818  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  36479819 aaaatttc 36479826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 36755515 - 36755408
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| | || |||||| |||| | ||  || || ||||||  ||||||||||    
T  36755515 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcattt 36755416  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  36755415 aaaatttc 36755408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 6658274 - 6658168
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||| |||| |||||| |||| | ||  || || | ||||  ||||||||||    
T  6658274 gcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaatcattt 6658175  T
Q  387 aaaattt 393  Q
    |||||||    
T  6658174 aaaattt 6658168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 15604358 - 15604447
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||||||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  15604358 tccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 15604447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 25230103 - 25230215
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| |||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||   |||||||||    
T  25230103 gcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcattt 25230202  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  25230203 aaaatttcgtccc 25230215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 44044115 - 44044227
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||| |||||||||| || ||||||| |||||||| |||| || ||| |||| ||||  || || || |||  ||||||||||    
T  44044115 gcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgtattcactaatccttgaaaactaaccttgtaatcattaatcattt 44044214  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  44044215 aaaatttcgtccc 44044227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 37895772 - 37895657
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||| | |||||||||| | |||| |  ||| |||||| |||||| ||  ||| | |||| |||||||||||||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaa 37895673  T
Q  389 aatttcatcccactcc 404  Q
    |||||| |||| ||||    
T  37895672 aatttcgtccctctcc 37895657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 45556474 - 45556363
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||  |||| |||||| || | | ||  || || ||||||  ||||||||||    
T  45556474 gcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaatctttgcaaactagccttgcaatcattaatcattt 45556375  T
Q  387 aaaatttcatcc 398  Q
    ||||||| ||||    
T  45556374 aaaatttaatcc 45556363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 8710875 - 8710786
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| ||||||||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  8710875 tccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 8710786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 394
Target Start/End: Complemental strand, 13692637 - 13692540
Alignment:
Q  297 gtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||||||||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 13692540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 15604746 - 15604657
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||||||| |||||| | | |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  15604746 tccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 15604657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 28226151 - 28226062
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  28226151 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 28226062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 398
Target Start/End: Original strand, 41587254 - 41587346
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcc 398  Q
    |||||||||||| | ||| |||||| |||||||| |||| ||| || |||||||||  ||||| |||| |||||||||||||||||||||||||    
T  41587254 tccttgcaattaagagtcatttaaaaattggtcc-tgtaatcgttaatcctggaaaattacccttgcattgtttaatcatttaaaatttcatcc 41587346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 394
Target Start/End: Original strand, 44713799 - 44713903
Alignment:
Q  290 taaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaa 389  Q
    ||||||||||||| ||||||| ||||| | |||||||||| ||||||| ||||| |||||| |||| | ||  || || ||||||  |||||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaa 44713898  T
Q  390 atttc 394  Q
    |||||    
T  44713899 atttc 44713903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 2318937 - 2318874
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgcta 350  Q
    |||||||||||||||| |||||| |||||||| |||||||||| |||||| |||||| ||||||    
T  2318937 gcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggttcatgtattcgcta 2318874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 3555251 - 3555358
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| ||| || ||||   ||  || || |||| | |||||||||||    
T  3555251 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatcattt 3555350  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  3555351 aaaatttc 3555358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 15848515 - 15848408
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||| |||||| ||||||||||||||| |||||||||| ||||||  ||||| |||||| |||| |  |  || || ||||||  ||||||||||    
T  15848515 gcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcattaatcattt 15848416  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  15848415 aaaatttc 15848408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 22051420 - 22051313
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||||||||||  || ||||||| ||| |||  |||| |||||| |||| | ||  ||||| |||| |||||||||||||    
T  22051420 gcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcattt 22051321  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  22051320 aaaatttc 22051313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 30729622 - 30729729
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||  |||||||||| |||||||| | || |||||| |||| | ||  | ||| |||| | ||||||| |||    
T  30729622 gcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcgttt 30729721  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  30729722 aaaatttc 30729729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 36382554 - 36382491
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgcta 350  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||||||| |||| ||||||    
T  36382554 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgcta 36382491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 11163055 - 11163161
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||| |||||||||   |||||||||| |||||||| |||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  11163055 gcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 11163154  T
Q  387 aaaattt 393  Q
    |||||||    
T  11163155 aaaattt 11163161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 394
Target Start/End: Complemental strand, 36480144 - 36480038
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||| | |||||||||| |||||||| | || |||||| |||| | ||  || || ||||||  ||||| |||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatcattaataattta 36480045  T
Q  388 aaatttc 394  Q
    |||||||    
T  36480044 aaatttc 36480038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 39423942 - 39423836
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||| ||| | || |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  39423942 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagtcttgcaatcattaatcattt 39423843  T
Q  387 aaaattt 393  Q
    |||||||    
T  39423842 aaaattt 39423836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 39423516 - 39423633
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||| |||||| ||||||| ||||| | |||||||||| |||||||  |||| |||||| | |||| ||  || || || | |||||||||||||    
T  39423516 gcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcattt 39423615  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  39423616 aaaatttcgtccctctcc 39423633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 10713150 - 10713046
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| | |||||||||| ||||||   |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  10713150 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcattt 10713051  T
Q  387 aaaat 391  Q
    |||||    
T  10713050 aaaat 10713046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 39936673 - 39936567
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| |||  ||| |||||||||| || ||||||| |||||||| |||| ||| || |||||| ||  ||||| ||||| ||||||||||||    
T  39936673 gctttaatatgtgtttcgtccctgcaattaggcgtggtttaaa-attggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcattt 39936575  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  39936574 aaaatttc 39936567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 6589781 - 6589679
Alignment:
Q  292 aatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaat 391  Q
    ||||||| |||  ||| |||||||| | ||| |||||| ||||||||||||| ||| || | |||| ||  ||||| ||||| |||||||||||||||||    
T  6589781 aatatgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcatttaaaat 6589682  T
Q  392 ttc 394  Q
    |||    
T  6589681 ttc 6589679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 9076494 - 9076444
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtc 337  Q
    |||||||||||||||| || |||||||||||| |||||||||| |||||||    
T  9076494 gcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggtc 9076444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 34447814 - 34447916
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||| ||||||| ||| |||||| |||||||| | || |||| | |||||  ||  ||||| |||| |||||||| ||||    
T  34447814 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtccctataatcgcaaatcctgacaatttacccttgcattgtttaataattt 34447913  T
Q  387 aaa 389  Q
    |||    
T  34447914 aaa 34447916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 3556436 - 3556329
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||  |||| ||||||||||||| | |||||||||| |||||||  |||| ||| || |||| | ||  || || |||| | |||||||||||    
T  3556436 gcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcattt 3556337  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  3556336 aaaatttc 3556329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 390
Target Start/End: Original strand, 6573568 - 6573647
Alignment:
Q  311 caattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||| ||| |||||| ||| ||||||||| |||||| |||||| ||  ||||| || | |||||||||||||||||    
T  6573568 caattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctggcaatttacccttgaattgtttaatcatttaaaa 6573647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 34448222 - 34448171
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    ||||||| |||||||| ||||||||||||||| || ||||||| ||||||||    
T  34448222 gcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtcc 34448171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 36755094 - 36755201
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||  ||||||  |||||||||| |||||| ||||||  ||||| ||||   ||  ||||| | || |||||||||||||    
T  36755094 gcttaaatatgtatttcatctttataattagaggtcgtttaaaaattggttcatgtaaccgctaatcctaacaatttacccttacattgtttaatcattt 36755193  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  36755194 aaaatttc 36755201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 398
Target Start/End: Complemental strand, 41588465 - 41588372
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcc 398  Q
    ||||| |||||||| ||| |||||| ||| |||| |||| |||||| | |||| ||  ||| | | || |||||||||||||||||||||||||    
T  41588465 tccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacacttacattgtttaatcatttaaaatttcatcc 41588372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 21370629 - 21370573
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    |||||||||||||||| ||||||| |||||   |||||||||| |||| ||||||||    
T  21370629 gcttaaatatgtatttcatccttgtaattataggtcgtttaaaaattgatccatgta 21370573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 25892432 - 25892512
Alignment:
Q  324 tttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    |||||| ||| ||||||||| |||||| |||||| ||  ||||| | || ||||||||||||||||| ||| |||| ||||    
T  25892432 tttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttccattgtttaatcatttaaaaattcgtccctctcc 25892512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 43742103 - 43741991
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| |||||||||||  ||| ||||||| |  ||| |||||| ||||||||||||| ||  || |||||  ||  ||||| ||||| ||||||||||||    
T  43742103 gcttcaatatgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcattt 43742004  T
Q  387 aaaatttcatccc 399  Q
    |||| || |||||    
T  43742003 aaaaattgatccc 43741991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 34464450 - 34464557
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||| || ||| ||  ||||| ||||||||||||||||||    
T  34464450 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcattt 34464549  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  34464550 aaaatttc 34464557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 6367563 - 6367680
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  6367563 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 6367662  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  6367663 aaaatttcgtccctctcc 6367680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 25647885 - 25648002
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||| || |||||| ||  |||||||||| | |||||||||||    
T  25647885 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcattt 25647984  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  25647985 aaaatttcgtccctctcc 25648002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 34464876 - 34464770
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||| |||||| || ||| ||  ||||| ||||||||||||||||||    
T  34464876 gcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcattt 34464777  T
Q  387 aaaattt 393  Q
    |||||||    
T  34464776 aaaattt 34464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 34850492 - 34850375
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  ||||| |||||  |||||||||||    
T  34850492 gcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcattt 34850393  T
Q  387 aaaatttcatcccactcc 404  Q
    ||||||||||||| ||||    
T  34850392 aaaatttcatccctctcc 34850375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 13914494 - 13914377
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||  || ||||||| ||||||||||||| |||||| |||||| ||  ||||| || | |||||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcattt 13914395  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  13914394 aaaatttcgtccctctcc 13914377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 23209754 - 23209637
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||| ||||||||    
T  23209754 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgttcaatcattt 23209655  T
Q  387 aaaatttcatcccactcc 404  Q
    | |||||| |||| ||||    
T  23209654 acaatttcgtccctctcc 23209637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 26024424 - 26024541
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||||||  |||| |||||| |||||| ||  ||||| |||| |||||||||||||    
T  26024424 gcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 26024523  T
Q  387 aaaatttcatcccactcc 404  Q
    |||| ||| |||| ||||    
T  26024524 aaaagttcgtccctctcc 26024541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 47999519 - 47999402
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||| |||| |||||| || ||| ||  |||||||||| | |||||||||||    
T  47999519 gcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatcattt 47999420  T
Q  387 aaaatttcatcccactcc 404  Q
    ||||| || |||| ||||    
T  47999419 aaaatatcgtccctctcc 47999402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 42248475 - 42248591
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||||  |||||||||| |||||||  ||||||||||| || ||| ||  ||||| |||| ||||||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcattta 42248574  T
Q  388 aaatttcatcccactcc 404  Q
    ||||||| |||| ||||    
T  42248575 aaatttcgtccctctcc 42248591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 36694675 - 36694568
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||  |||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  36694675 gcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 36694576  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  36694575 aaaatttc 36694568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 36710776 - 36710669
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||  |||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  36710776 gcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 36710677  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  36710676 aaaatttc 36710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 183619 - 183501
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtg-tcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatt 385  Q
    |||||||||||||||||||||||| ||||||| | ||||||||| |||||||| |||| |||||| |||| | ||  |||||||||| | ||||||||||    
T  183619 gcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatcatt 183520  T
Q  386 taaaatttcatcccactcc 404  Q
    ||||||||| |||| ||||    
T  183519 taaaatttcgtccctctcc 183501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 19018056 - 19017950
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||||   |||||||||| ||||||||||||| |||||| |||||| ||  ||||| |||| | |||||||||||    
T  19018056 gcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatcattt 19017957  T
Q  387 aaaattt 393  Q
    |||||||    
T  19017956 aaaattt 19017950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 14878980 - 14879089
Alignment:
Q  295 atgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||| ||||||||||||||| |||||||||| |||||| |||||| |||||| || ||| ||  ||||| |||| |||||||||||||||||||||    
T  14878980 atgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 14879079  T
Q  395 atcccactcc 404  Q
     |||| ||||    
T  14879080 gtccctctcc 14879089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 19515820 - 19515937
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| ||| || | |||||||  ||||| |||| |||||||| ||||    
T  19515820 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaattattt 19515919  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  19515920 aaaatttcgtccctctcc 19515937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 34849012 - 34849129
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| |||||||| |||| |||||| |||| | ||  ||||| |||||  |||||||||||    
T  34849012 gcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcattt 34849111  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  34849112 aaaatttcgtccctctcc 34849129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 40772508 - 40772625
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||||||| |||| |||||| |||||  ||  ||| | |||| |||||||||||||    
T  40772508 gcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcattt 40772607  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  40772608 aaaatttcgtccctctcc 40772625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 46163033 - 46163138
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||| ||| ||||||| |||||||||| ||||||||||||| |||||| |||||  ||  ||||| |||| |||||||||||||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 46163132  T
Q  389 aatttc 394  Q
    ||||||    
T  46163133 aatttc 46163138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 26024819 - 26024712
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  26024819 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcattt 26024720  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  26024719 aaaatttc 26024712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 183222 - 183328
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  183222 gcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 183321  T
Q  387 aaaattt 393  Q
    |||||||    
T  183322 aaaattt 183328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 41098734 - 41098840
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||||||||||| |||||||||| |||||||  |||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  41098734 gcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 41098833  T
Q  387 aaaattt 393  Q
    |||||||    
T  41098834 aaaattt 41098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 47999124 - 47999230
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  47999124 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 47999223  T
Q  387 aaaattt 393  Q
    |||||||    
T  47999224 aaaattt 47999230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 49723147 - 49723042
Alignment:
Q  293 atatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatt 392  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||| |||| | ||  || || | ||||  ||||||||||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatt 49723048  T
Q  393 tcatcc 398  Q
    ||||||    
T  49723047 tcatcc 49723042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 4960541 - 4960653
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| |||| ||  |||| |||||| |||| | ||  ||||| |||| |||||||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcattt 4960640  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  4960641 aaaatttcgtccc 4960653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 17662277 - 17662165
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||| || |||||||||| |||||| | | || ||| || |||||| ||  ||||| |||| |||||||||||||    
T  17662277 gcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcattt 17662178  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  17662177 aaaatttcgtccc 17662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 288 - 404
Target Start/End: Complemental strand, 40210796 - 40210680
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||| ||||||||||| | |||||||| |||||||  |||| |||||| | |||| ||  ||||| |||| ||||||||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 40210697  T
Q  388 aaatttcatcccactcc 404  Q
    ||||||| |||| ||||    
T  40210696 aaatttcgtccctctcc 40210680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 6367989 - 6367882
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  6367989 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 6367890  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  6367889 aaaatttc 6367882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 24009576 - 24009687
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| || ||| |||| |  |  || || ||||||  ||||||||||    
T  24009576 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgccaactagccttgcaatcattaatcattt 24009675  T
Q  387 aaaatttcatcc 398  Q
    ||||||||||||    
T  24009676 aaaatttcatcc 24009687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 24009966 - 24009851
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||| ||||||| |||||||||||||||  ||||||||| |||||||  |||| |||| | |||||| ||  ||||| |||| |||||||||||||||    
T  24009966 ttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtttaatcatttaa 24009867  T
Q  389 aatttcatcccactcc 404  Q
    |||||| |||| ||||    
T  24009866 aatttcgtccctctcc 24009851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 30711754 - 30711647
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  30711754 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 30711655  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  30711654 aaaatttc 30711647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 36694283 - 36694390
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  36694283 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 36694382  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  36694383 aaaatttc 36694390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 36710384 - 36710491
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  36710384 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 36710483  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  36710484 aaaatttc 36710491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 43759249 - 43759142
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| || ||||| |||| |||||| |||| | ||  || || |||||| || ||||||||    
T  43759249 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatcttcaatcattt 43759150  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  43759149 aaaatttc 43759142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 35473632 - 35473702
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctgg 357  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| ||||||    
T  35473632 gcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg 35473702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 404
Target Start/End: Original strand, 1103463 - 1103579
Alignment:
Q  290 taaatatgtatttgatccttgcaattaggtgtcgtttaaagat--tggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||| ||| ||||||||||  |||||||||| ||  |||||| |||| |||||| |||||| ||  ||||| |||| ||||||||||||||    
T  1103463 taaatatgtatttcatctttgcaattagaggtcgtttaaaaatattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 1103562  T
Q  388 aaatttcatcccactcc 404  Q
    ||||||| |||| ||||    
T  1103563 aaatttcgtccctctcc 1103579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 37578195 - 37578300
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || | ||||  ||||||||||||    
T  37578195 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcattaatcatttaa 37578294  T
Q  389 aatttc 394  Q
    ||||||    
T  37578295 aatttc 37578300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 46899062 - 46899174
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||| |||||| | || | ||  || |  ||||||  ||||||||||    
T  46899062 gcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatcattt 46899161  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  46899162 aaaatttcgtccc 46899174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 7820955 - 7821062
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| ||| |||||  ||| |||| |||| |||||| ||||   ||  ||||| |||| |||||||||||||    
T  7820955 gcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatcattt 7821054  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  7821055 aaaatttc 7821062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 13914069 - 13914176
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||| ||||||| ||||||||||||||| |||||||||| ||| ||||||||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  13914069 gcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcattt 13914168  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  13914169 aaaatttc 13914176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 17661853 - 17661959
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || |  ||||||  ||||||||||    
T  17661853 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcc-tgtattcgctaatccttgcaaactagcattgcaatcattaatcattt 17661951  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  17661952 aaaatttc 17661959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 37578619 - 37578512
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||| || |||||||||| ||||||   |||| |||||| |||||| ||  ||||| | || || ||||||||||    
T  37578619 gcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcattt 37578520  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  37578519 aaaatttc 37578512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 5734011 - 5734116
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||  |||||||||||||| |||||||||| |||||| |||||| |||||| |||| | ||  ||  | |||| |||||||||||||    
T  5734011 gcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggt-catgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 5734109  T
Q  387 aaaattt 393  Q
    |||||||    
T  5734110 aaaattt 5734116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 17692610 - 17692500
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||| |||||||||| || ||||| |||  |||||| |||| | ||  || |  |||| |||||||||||||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcatttaa 17692511  T
Q  389 aatttcatccc 399  Q
    |||||| ||||    
T  17692510 aatttcgtccc 17692500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 35152344 - 35152450
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||  |||||||||| |||||||| | || |||||| | |||  ||  ||||| | || |||||||||||||    
T  35152344 gcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatcattt 35152443  T
Q  387 aaaattt 393  Q
    |||||||    
T  35152444 aaaattt 35152450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 40714850 - 40714761
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| ||||||||| |||||| |||||| ||  ||||  |||| |||||||||||||||||||||    
T  40714850 tccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttc 40714761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 5735138 - 5735026
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| ||||||||||  ||||||||| |||||| |||||| |||||| |||| | ||  || || | ||||  ||||||||||    
T  5735138 gcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcattaatcattt 5735039  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  5735038 aaaatttcgtccc 5735026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 30711328 - 30711440
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| || ||||||| |||| ||  | || |||||| |||| | ||  || || |||| |||||||||||||    
T  30711328 gcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcattt 30711427  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  30711428 aaaatttcgtccc 30711440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 32917687 - 32917576
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||||||||| | |||||||||| |||||||  |||| ||| || |||| | ||  || || ||||||  ||||||||||    
T  32917687 gcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagccttgcaatcattaatcattt 32917588  T
Q  387 aaaatttcatcc 398  Q
    ||||||||||||    
T  32917587 aaaatttcatcc 32917576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 48779546 - 48779439
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||||| | |||| |||| | ||  ||  | ||||||  ||||||||||    
T  48779546 gcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatccttgcaaactagtcttgcaatcattaatcattt 48779447  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  48779446 aaaatttc 48779439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 42533027 - 42533081
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||    
T  42533027 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgta 42533081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 17188973 - 17189062
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| | |||||||||||||||||||    
T  17188973 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttc 17189062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 40714463 - 40714552
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| ||| || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  40714463 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 40714552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 17691220 - 17691332
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| |||||||||||  ||||| ||| |||| |||||||||| |||||||| |||| |||||| |||| | ||  ||  | |||| |||||||||||||    
T  17691220 gctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 17691319  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  17691320 aaaatttcgtccc 17691332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 31197066 - 31197173
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| |||||||||| ||| |||||| ||| |||  |||| ||| || |||||||||  ||||| ||||     |||||||||    
T  31197066 gcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgca-----taatcattt 31197160  T
Q  387 aaaatttcatccc 399  Q
    |||||||||||||    
T  31197161 aaaatttcatccc 31197173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 35152757 - 35152689
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||| |||  |||| |||||| ||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatcct 35152689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 40435348 - 40435396
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtc 337  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 40435396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 40772886 - 40772818
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| ||||||||||||||| ||||||| || || ||||| |||| |||||| ||||    
T  40772886 gcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaatcct 40772818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 46900027 - 46899915
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| |||||||| | ||| |||||| ||||||| ||||| |||||| | || | ||  || || ||||||  ||||||||||    
T  46900027 gcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatcattaatcattt 46899928  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  46899927 aaaatttcgtccc 46899915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 393
Target Start/End: Original strand, 49955366 - 49955454
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    ||||||||||||||  || |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| ||||||||||||||||||||    
T  49955366 tccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattt 49955454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 1103888 - 1103781
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||| ||||| |||||||||||||   |||||||||| |||||||| |||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  1103888 gcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 1103789  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  1103788 aaaatttc 1103781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 394
Target Start/End: Complemental strand, 12906047 - 12905977
Alignment:
Q  324 tttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||| ||| ||||||||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  12906047 tttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 12905977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 13300331 - 13300281
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtc 337  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| |||||||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggtc 13300281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 32917278 - 32917368
Alignment:
Q  304 atccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||||  ||||||||| |||||||| |||| |||||| |||||  |   ||| | |||| |||||||||||||||||||||    
T  32917278 atccttgcaattaggaatcgtttaaaaattggtccctgtaatcgctaatcctgacagtttactcttgcattgtttaatcatttaaaatttc 32917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 17189258 - 17189173
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaa 390  Q
    |||||||||||||  ||| |||||| ||| |||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||    
T  17189258 tccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 20760912 - 20760823
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||| |||||||| ||| |||||| ||| |||  |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  20760912 tccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 20760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 28324824 - 28324912
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| |||||||||| ||| || |||||| |||||| |||||  ||  ||||| |||| | |||||||||||||||||||    
T  28324824 tccttgcaattaggcgtcgtttaaa-attagttcatgtaatcgctaatcctgacaatttacccttgcattatttaatcatttaaaatttc 28324912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 30326515 - 30326604
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||  |||| |||||| | |||| ||  ||||| |||| |||||||||||||||||||||    
T  30326515 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcatttaaaatttc 30326604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 35041021 - 35040932
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||| ||||||  ||| |||||| ||| ||||||||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  35041021 tccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 35040932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 40210373 - 40210478
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||||  ||||||||||  ||||||  |||| |||||| |||| | ||  ||  | ||||||  ||||||||||||    
T  40210373 ttaaatatgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatccttgcaaactagacttgcaatcattaatcatttaa 40210472  T
Q  389 aatttc 394  Q
    ||||||    
T  40210473 aatttc 40210478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 49955754 - 49955665
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||  |||| ||| || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  49955754 tccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 49955665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 394
Target Start/End: Complemental strand, 41099157 - 41099053
Alignment:
Q  290 taaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaa 389  Q
    ||||||||||||| |||||| |||||||  |||||||||| |||||||  |||| |||||| |||| | ||  || || | ||||  |||||||||||||    
T  41099157 taaatatgtatttcatccttacaattagtggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatcattaatcatttaaa 41099058  T
Q  390 atttc 394  Q
    |||||    
T  41099057 atttc 41099053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 397
Target Start/End: Complemental strand, 45750249 - 45750157
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatc 397  Q
    |||||||||||||| ||| |||||| ||| |||  |||| |||||| |||| | ||  ||| | |||| ||||||||||||||||||||||||    
T  45750249 tccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatcatttaaaatttcatc 45750157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 1841460 - 1841567
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||| |||||||| ||  ||||||||| | |||||||||| |||||||   ||| |||||| |||||  ||  ||||| | || |||||||||||||    
T  1841460 gcttaaacatgtatttcatatttgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatcattt 1841559  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  1841560 aaaatttc 1841567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 334
Target Start/End: Complemental strand, 7231676 - 7231629
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattg 334  Q
    |||||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  7231676 gcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattg 7231629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 19017630 - 19017677
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattg 334  Q
    |||||||||||||||| ||||||||||||||| || ||||||| ||||    
T  19017630 gcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattg 19017677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 51015634 - 51015685
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    ||||||||||||| ||||||| ||||| |||| |||||||||| ||||||||    
T  51015634 gcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtcc 51015685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 51019776 - 51019725
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    ||||||||||||| ||||||| ||||| |||| |||||||||| ||||||||    
T  51019776 gcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtcc 51019725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 1841883 - 1841817
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||| ||||||| ||| ||| |||||||||| |||| ||| |||| |||||| ||||    
T  1841883 ttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattgttccctgtattcgctaatcct 1841817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 6518223 - 6518181
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaa 329  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||    
T  6518223 gcttaaatatatatttcatccttgcaattaggggtcgtttaaa 6518181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 31050969 - 31051058
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||  |||||| ||| |||  |||| |||||| |||||| ||  ||||  |||| |||||||||||||||||||||    
T  31050969 tccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttc 31051058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 19322893 - 19322961
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcct 355  Q
    |||||||||||||||| ||||||  ||||| | |||||||||| ||| || |||||| |||||| ||||    
T  19322893 gcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttcatgtattcgctaatcct 19322961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 23209365 - 23209404
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaa 329  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  23209365 ttaaatatgtatttcatccttgcaattagg-gtcgtttaaa 23209404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 393
Target Start/End: Complemental strand, 28011746 - 28011658
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaattt 393  Q
    |||||||||||||| ||| |||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  |||||||||||||||||    
T  28011746 tccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaattt 28011658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 399
Target Start/End: Complemental strand, 44523487 - 44523451
Alignment:
Q  363 tacccctgcaatgtttaatcatttaaaatttcatccc 399  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  44523487 tacccttgcattgtttaatcatttaaaatttcatccc 44523451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 30337450 - 30337567
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| || ||||||||||    
T  30337450 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcattt 30337549  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  30337550 aaaatttcgtccctctcc 30337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 26463180 - 26463292
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| ||| || |||||| ||  ||||| ||||| ||||||||||||    
T  26463180 gcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcattt 26463279  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  26463280 aaaatttcgtccc 26463292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 12080638 - 12080754
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||| ||||||| ||||||||||||||| |||||||||| |||| ||| |||| |||||| || ||| ||  |||||||||| ||||||||||||||    
T  12080638 cttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcattta 12080737  T
Q  388 aaatttcatcccactcc 404  Q
    ||||||| |||| ||||    
T  12080738 aaatttcgtccctctcc 12080754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 33517537 - 33517652
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||| |||||||  ||||||||| |||||||| |||| |||||| |||||| ||  ||||| |||| |||||||||||||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 33517636  T
Q  389 aatttcatcccactcc 404  Q
    |||||| |||| ||||    
T  33517637 aatttcgtccctctcc 33517652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 33517961 - 33517854
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | || ||| || ||||||  ||||||||||    
T  33517961 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcattt 33517862  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  33517861 aaaatttc 33517854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 3059683 - 3059573
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  3059683 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 3059584  T
Q  387 aaaatttcatc 397  Q
    |||||||||||    
T  3059583 aaaatttcatc 3059573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 21628140 - 21628034
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||| ||||| |||||||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  21628140 gcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 21628041  T
Q  387 aaaattt 393  Q
    |||||||    
T  21628040 aaaattt 21628034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 681155 - 681048
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||  |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  681155 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 681056  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  681055 aaaatttc 681048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 30337845 - 30337738
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  30337845 gcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcattt 30337746  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  30337745 aaaatttc 30337738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 30803864 - 30803979
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||| || ||||| ||| || |||||| ||  ||||| | || |||||||||||||||    
T  30803864 ttaaatatgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaa 30803963  T
Q  389 aatttcatcccactcc 404  Q
    |||||| |||| ||||    
T  30803964 aatttcgtccctctcc 30803979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 8090354 - 8090248
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||  ||||||||||||||| |||||||||| |||||||| |||| || ||| |||| | ||  ||||| ||||| ||||||||||||    
T  8090354 gcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatcattt 8090255  T
Q  387 aaaattt 393  Q
    |||||||    
T  8090254 aaaattt 8090248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 17734590 - 17734484
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||||| |||||| | |||||||||| |||| |||||||| |||||| ||||   ||  ||||| |||| |||||||||||||    
T  17734590 gcttaaatatgtatttgatccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcattt 17734491  T
Q  387 aaaattt 393  Q
    |||||||    
T  17734490 aaaattt 17734484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 33647378 - 33647272
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  33647378 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcattaatcattt 33647279  T
Q  387 aaaattt 393  Q
    |||||||    
T  33647278 aaaattt 33647272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 30725761 - 30725877
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || |||||||||||| |||||||||| |||||||  |||| |||||| |||||  ||  ||||| |||| |||||||||||||    
T  30725761 gcttaaatatgtatttcattcttgcaattagg-gtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcattt 30725859  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  30725860 aaaatttcgtccctctcc 30725877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 13379909 - 13379797
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||| | || | ||  || || ||||||  ||||||||||    
T  13379909 gcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcattaatcattt 13379810  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  13379809 aaaatttcgtccc 13379797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 679867 - 679974
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||| | |||||||||| |||||||  |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  679867 gcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 679966  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  679967 aaaatttc 679974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 3059260 - 3059375
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||| ||||||||||||| | ||||||||||   | ||||||||| |||||| |||| | ||  ||||| |||| |||||||||||||||    
T  3059260 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 3059359  T
Q  389 aatttcatcccactcc 404  Q
    |||||| |||| ||||    
T  3059360 aatttcgtccctctcc 3059375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 17734197 - 17734304
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| | |||| | |||| |||| | ||  || || ||||||  ||||||||||    
T  17734197 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatcattt 17734296  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  17734297 aaaatttc 17734304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 30726186 - 30726079
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | ||  || || || |||  ||||||||||    
T  30726186 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatcattt 30726087  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  30726086 aaaatttc 30726079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 11434804 - 11434910
Alignment:
Q  288 cttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattta 387  Q
    ||||||||||||||| ||||||||||||| | |||||||||| ||||||||||||| |||||| || | | ||  || || ||||||  |||||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatcattaatcattta 11434903  T
Q  388 aaatttc 394  Q
    |||||||    
T  11434904 aaatttc 11434910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 12408598 - 12408486
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||| |||||||| || |||||||  ||||||| |||| |||||| |||| | ||  || || ||||| ||||||||||||    
T  12408598 gcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatccttgcaaattatccttgcaaagtttaatcattt 12408499  T
Q  387 aaaatttcatccc 399  Q
    ||||||| |||||    
T  12408498 aaaatttgatccc 12408486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 12081063 - 12080956
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| ||| |||| |||| |||||| |||| | ||  ||  | ||||||  ||||||||||    
T  12081063 gcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 12080964  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  12080963 aaaatttc 12080956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 399
Target Start/End: Original strand, 8089444 - 8089556
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||   ||| |||||||||| |||||||||| |||||||| | || ||| || |||| | ||  ||||| |||| |||||||||||||    
T  8089444 gcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcattt 8089543  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  8089544 aaaatttcgtccc 8089556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 15116659 - 15116556
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| |||||||||||  |||||||||||||| |||||||||| ||||||||  ||| |||||| |||| | ||  || || ||||| ||||||||||||    
T  15116659 gctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcattt 15116560  T
Q  387 aaaa 390  Q
    ||||    
T  15116559 aaaa 15116556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 20651011 - 20651118
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    ||||||||||||||||||||| ||||||||||  ||||||||| |||||| | |||| |||||| |||| | ||   | || ||||||  ||||||||||    
T  20651011 gcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatcattaatcattt 20651110  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  20651111 aaaatttc 20651118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 21627714 - 21627821
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||| ||||| |  ||||||||| |||| |||||||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  21627714 gcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 21627813  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  21627814 aaaatttc 21627821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 15115340 - 15115446
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||   ||||||||| |||||||| | || ||| || |||| | ||  || || ||||| ||||||||||||    
T  15115340 gcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcattt 15115439  T
Q  387 aaaattt 393  Q
    |||||||    
T  15115440 aaaattt 15115446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 22502793 - 22502882
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  22502793 tccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 22502882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 30804286 - 30804225
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgcta 350  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||| ||| |||| ||||||    
T  30804286 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtattcgcta 30804225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 31407285 - 31407196
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  31407285 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 31407196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 394
Target Start/End: Complemental strand, 21836447 - 21836348
Alignment:
Q  295 atgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||| ||| ||||||||||||||| ||| |||||| ||| || | |||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  21836447 atgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 21836348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 12407509 - 12407615
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||| |||||| |  ||||||||| |||||||  |||| |||||| |||| | ||  ||| |  |||| ||||||||||||    
T  12407509 gcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcattt 12407608  T
Q  387 aaaattt 393  Q
    |||||||    
T  12407609 aaaattt 12407615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 22617886 - 22617932
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattgg 335  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgg 22617932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 7160823 - 7160912
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||  |||| |||||| |||||| ||  ||| | |||| |||||||||||||||||||||    
T  7160823 tccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 7160912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 7905262 - 7905351
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| ||| || |||||| ||  ||||| |||| | |||||||||||||||||||    
T  7905262 tccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcatttaaaatttc 7905351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 14196993 - 14196904
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| |||||||||| ||| |||| |||| | |||| |||||| ||  || || ||||||  ||||||||||||||||||    
T  14196993 tccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttc 14196904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 22503181 - 22503092
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| |||||| |||||| ||  || || |||| |||||||||||||||| ||||    
T  22503181 tccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgtttaatcatttaaattttc 22503092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 394
Target Start/End: Original strand, 11392866 - 11392946
Alignment:
Q  314 ttaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||| |||||||||| |||||||| |||| |||||| ||||   ||  ||||| |||| |||||||||||||||||||||    
T  11392866 ttaggagtcgtttaaaaattggtccttgtaatcgctaatcctaataatttacccttgcattgtttaatcatttaaaatttc 11392946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 394
Target Start/End: Original strand, 21836053 - 21836139
Alignment:
Q  307 cttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| ||| |||||| ||| |||  |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  21836053 cttgcaattaggcgtcatttaaaaattagtct-tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 21836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 28498452 - 28498346
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||| ||||||| |||  ||| ||||||||||  || |||||| |||||||| |||| |||||| |||||| ||  |||||   ||| ||||||||||||    
T  28498452 gctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatcattt 28498353  T
Q  387 aaaattt 393  Q
    |||||||    
T  28498352 aaaattt 28498346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 6517522 - 6517610
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||  |||| |||||| |||||| ||  ||||  |||| |||||||||||||||||||||    
T  6517522 tccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaatttacct-tgcattgtttaatcatttaaaatttc 6517610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 7161211 - 7161122
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| | || || ||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  7161211 tccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 7161122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 7905650 - 7905561
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||||||| |||| | ||| |||| | || |||||| | |||| ||  ||||| |||| ||||||||||||| |||||||    
T  7905650 tccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgcattgtttaatcatttcaaatttc 7905561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 15913955 - 15913866
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| | ||| |||||| ||| |||||| || ||| || || ||||||  |||||||| | |||||||| ||||||||||||    
T  15913955 tccttgcaattaagggtcatttaaaaatttgtccatataatcgttaatcttggaaaattacccctgtattgtttaataatttaaaatttc 15913866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 24210608 - 24210649
Alignment:
Q  363 tacccctgcaatgtttaatcatttaaaatttcatcccactcc 404  Q
    ||||| ||||| ||||||||||||||||||||||||| ||||    
T  24210608 tacccttgcaaagtttaatcatttaaaatttcatccctctcc 24210649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 399
Target Start/End: Complemental strand, 20652074 - 20651962
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| || | |||||||| | |||||||||| |||| ||| |||| || ||| |||| | ||   | || ||||||  ||||||||||    
T  20652074 gcttaaatatgtatttaattcctgcaattatgggtcgtttaaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatcgttaatcattt 20651975  T
Q  387 aaaatttcatccc 399  Q
    |||||||| ||||    
T  20651974 aaaatttcgtccc 20651962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 26464626 - 26464570
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    |||||||||||||||| |||| |||||||||| ||| |||||| | |||||| ||||    
T  26464626 gcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgta 26464570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 1770 - 1887
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||| |||||| || ||| ||  ||||| |||| |||||||||||||    
T  1770 gcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 1869  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  1870 aaaatttcgtccctctcc 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 2168 - 2117
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtcc 338  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  2168 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtcc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 139675 - 139790
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||| |||||| ||  ||||| || | || ||||||||||||    
T  139675 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaatcatttaa 139774  T
Q  389 aatttcatcccactcc 404  Q
    |||||| |||| ||||    
T  139775 aatttcgtccctctcc 139790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 140066 - 140012
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgta 343  Q
    |||||||||||||||||||||||||||||| || ||||||| |||||||| ||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtccctgta 140012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 68966 - 69083
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| |||||||| |||| || ||| |||||| ||  ||||| |||| |||||||||||||    
T  68966 gcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcattt 69065  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  69066 aaaatttcgtccctctcc 69083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 69392 - 69285
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||| |||||| |||| | ||  || || ||||||  ||||||||||    
T  69392 gcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 69293  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  69292 aaaatttc 69285  T

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Target: scaffold0707 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 6506 - 6399
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||| |||||| |||| | || ||| || ||||||  ||||||||||    
T  6506 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcattt 6407  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  6406 aaaatttc 6399  T

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Target: scaffold0005 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 37990 - 37873
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||||  |||| |||||| |||||  ||  ||||| || | |||||||||||||    
T  37990 gcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcattt 37891  T
Q  387 aaaatttcatcccactcc 404  Q
    |||||||| |||| ||||    
T  37890 aaaatttcgtccctctcc 37873  T

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Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 37565 - 37628
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgcta 350  Q
    |||||||||| ||||| ||||||||||||||   ||||||||| |||||||| |||| ||||||    
T  37565 gcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgcta 37628  T

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Target: scaffold0328 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 295 - 394
Target Start/End: Complemental strand, 11557 - 11458
Alignment:
Q  295 atgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||| ||| ||||||||||||||| ||| |||||| ||| ||||||||| ||| || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  11557 atgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 11458  T

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Target: scaffold0075 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 14430 - 14536
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| ||| ||| || || |||||| |||| | ||  || || ||||||  ||||||||||    
T  14430 gcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaattagtctatttattcgctaatccttgcaaactagccttgcaatcattaatcattt 14529  T
Q  387 aaaattt 393  Q
    |||||||    
T  14530 aaaattt 14536  T

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Target: scaffold0075; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 14817 - 14767
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtc 337  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| |||||||    
T  14817 gcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtc 14767  T

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Target: scaffold0771 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 939 - 1028
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    ||||||||||||||  || |||||| ||| ||||||||| |||||| || ||| ||  ||||| |||| |||||||||||||||||||||    
T  939 tccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 1028  T

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Target: scaffold0388 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 12646 - 12557
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| |||| |||| ||| || |||||| ||  ||||| |||| |||||||||||||||||||||    
T  12646 tccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 12557  T

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Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 19860 - 19965
Alignment:
Q  289 ttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaa 388  Q
    ||||||||||||||  |||||||||||| | |||||||||| |||||||| |||  |||||| |||| | ||  ||||  |||| | |||||||||||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatcatttaa 19959  T
Q  389 aatttc 394  Q
    ||||||    
T  19960 aatttc 19965  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 222196 - 222107
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||| ||| |||||| ||| || |||||| |||||| |||||  ||  ||||| |||| |||||||||||||||||||||    
T  222196 tccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 222107  T

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Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 394
Target Start/End: Original strand, 221812 - 221898
Alignment:
Q  307 cttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||| ||| |||||| ||| |||  |||| |||||| |||||| ||  ||||| |||| |||||||||||||||||||||    
T  221812 cttgcaattaggcgtcatttaaaaattagtct-tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 221898  T

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Target: scaffold0775 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 4963 - 5070
Alignment:
Q  287 gcttaaatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcattt 386  Q
    |||||||||||||||| |||| | |||||||| |||||||||| |||| ||| | || |||||| |||| | ||  || || ||||||  ||||||||||    
T  4963 gcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatcattt 5062  T
Q  387 aaaatttc 394  Q
    ||||||||    
T  5063 aaaatttc 5070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 6400 - 6298
Alignment:
Q  292 aatatgtatttgatccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaat 391  Q
    ||||||| |||  |||||| ||||||| |||  ||||| |||||||| | || ||| || |||| | ||  ||||| |||||||||||||||||||||||    
T  6400 aatatgtgtttcttccttgaaattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaat 6301  T
Q  392 ttc 394  Q
    |||    
T  6300 ttc 6298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 399
Target Start/End: Complemental strand, 239960 - 239866
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttcatccc 399  Q
    |||||||| ||||| ||| |||||| |||||| | |||| ||| || |||||| ||  ||||| | ||| |||||||||||||||||||| ||||    
T  239960 tccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaatttcgtccc 239866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 2412 - 2501
Alignment:
Q  305 tccttgcaattaggtgtcgtttaaagattggtccatgtagtcgctagtcctggaaaggtacccctgcaatgtttaatcatttaaaatttc 394  Q
    |||||||||||||  ||| |||||| |||  ||| |||| |||||| |||| | ||  ||||| |||| |||||||||||||||||||||    
T  2412 tccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 2501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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