View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0378_low_19 (Length: 250)
Name: NF0378_low_19
Description: NF0378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0378_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 91 - 243
Target Start/End: Complemental strand, 10300146 - 10299994
Alignment:
| Q |
91 |
ataatttggttttgtcataaaaagatgacagtggaaaaaggtagcaacatgaaccatcaacaacagccatttgaagtatccattgacactgctggttcca |
190 |
Q |
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| T |
10300146 |
ataatttggttttgtcataaaaagatgacagtggaaaaaggtagcaacatgaaccatcaacaacagccatttgaagtatccattgacactgctggttcca |
10300047 |
T |
|
| Q |
191 |
agtgttttgacgacgatggccgtttaaaacgaactggtaaattcattcatctc |
243 |
Q |
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| T |
10300046 |
agtgttttgacgacgatggccgtttaaaacgaactggtaaattcattcttctc |
10299994 |
T |
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