View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0381_low_4 (Length: 251)
Name: NF0381_low_4
Description: NF0381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0381_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 30 - 241
Target Start/End: Complemental strand, 502231 - 502020
Alignment:
| Q |
30 |
tatattcgctttatatattggtatagattaaaaataagttataagcttaatttgtgggaaaaatttgaatcaaaccgatctatctttgtaatacaacctt |
129 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
502231 |
tatattcgctttatatattggtatagattaaaaataagttataagcttaatttgtgggaaaaatttgaatcaaaccgatctatctttgttatacaacctt |
502132 |
T |
|
| Q |
130 |
attagcaaaaatgctagaaaactcatcttaccaaatagacccatggataatactttgtaaacacaatagaagtttcgattaatgtaactatcagagacgt |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
502131 |
attagcaaaaatgctagaaaactcatcttaccaaatagacccatggataatactttgtaaacacaatagaagtttcgattaatgtaactatcagagacgt |
502032 |
T |
|
| Q |
230 |
gataaatgagta |
241 |
Q |
| |
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|||||||||||| |
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|
| T |
502031 |
gataaatgagta |
502020 |
T |
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