View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0384_high_5 (Length: 251)

Name: NF0384_high_5
Description: NF0384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0384_high_5
NF0384_high_5
[»] chr6 (68 HSPs)
chr6 (1-217)||(27332927-27333141)
chr6 (1-217)||(27393667-27393881)
chr6 (1-250)||(19652458-19652707)
chr6 (5-217)||(23019675-23019885)
chr6 (1-237)||(25644587-25644821)
chr6 (1-217)||(4667856-4668070)
chr6 (1-217)||(4674703-4674917)
chr6 (1-199)||(4189220-4189416)
chr6 (1-217)||(4185466-4185680)
chr6 (37-250)||(18457014-18457226)
chr6 (1-206)||(28496127-28496330)
chr6 (1-206)||(29808537-29808741)
chr6 (54-241)||(22080355-22080542)
chr6 (56-241)||(25956239-25956424)
chr6 (57-241)||(19303159-19303343)
chr6 (58-217)||(18409470-18409628)
chr6 (110-217)||(22779870-22779977)
chr6 (125-228)||(20637925-20638029)
chr6 (54-206)||(29060856-29061007)
chr6 (124-217)||(1561688-1561781)
chr6 (125-241)||(18821448-18821565)
chr6 (125-217)||(20360614-20360706)
chr6 (110-217)||(17287439-17287546)
chr6 (54-217)||(25628998-25629160)
chr6 (1-93)||(19668637-19668728)
chr6 (54-206)||(20594089-20594240)
chr6 (131-209)||(20109607-20109685)
chr6 (1-217)||(21939647-21939861)
chr6 (1-217)||(31155041-31155255)
chr6 (167-217)||(22439227-22439277)
chr6 (138-209)||(18696962-18697034)
chr6 (165-228)||(22334513-22334577)
chr6 (1-44)||(1561566-1561609)
chr6 (150-217)||(16920287-16920354)
chr6 (154-217)||(25611366-25611429)
chr6 (167-206)||(25641838-25641877)
chr6 (138-209)||(33443520-33443591)
chr6 (175-217)||(19863413-19863455)
chr6 (167-217)||(22432677-22432727)
chr6 (131-197)||(35008618-35008684)
chr6 (54-91)||(17106049-17106086)
chr6 (58-91)||(18177438-18177471)
chr6 (58-91)||(18204400-18204433)
chr6 (165-217)||(15894073-15894125)
chr6 (54-206)||(16830112-16830263)
chr6 (138-209)||(18706713-18706785)
chr6 (54-94)||(18821585-18821625)
chr6 (178-226)||(22405700-22405748)
chr6 (170-228)||(11185922-11185981)
chr6 (178-217)||(18180925-18180964)
chr6 (178-217)||(21739666-21739705)
chr6 (175-206)||(22059398-22059429)
chr6 (131-197)||(17106180-17106246)
chr6 (61-91)||(18199182-18199212)
chr6 (159-209)||(19668868-19668918)
chr6 (131-197)||(20224412-20224478)
chr6 (131-197)||(22118396-22118462)
chr6 (57-94)||(11185820-11185857)
chr6 (125-206)||(15685755-15685836)
chr6 (54-91)||(35008466-35008503)
chr6 (165-217)||(15041194-15041246)
chr6 (54-94)||(16920399-16920439)
chr6 (1-93)||(20077938-20078030)
chr6 (54-94)||(20360726-20360766)
chr6 (54-94)||(22831817-22831857)
chr6 (165-217)||(22831917-22831969)
chr6 (56-92)||(23527872-23527908)
chr6 (54-94)||(25611489-25611529)
[»] chr4 (53 HSPs)
chr4 (1-251)||(8846637-8846888)
chr4 (1-227)||(39705920-39706145)
chr4 (3-217)||(15099615-15099828)
chr4 (1-227)||(15190580-15190805)
chr4 (1-250)||(12774262-12774510)
chr4 (1-197)||(52242856-52243049)
chr4 (24-217)||(15464572-15464764)
chr4 (1-217)||(44928566-44928779)
chr4 (24-250)||(21815241-21815465)
chr4 (24-241)||(21814921-21815136)
chr4 (24-241)||(21818343-21818558)
chr4 (67-217)||(43198231-43198380)
chr4 (1-217)||(24029005-24029219)
chr4 (54-227)||(13844855-13845028)
chr4 (54-217)||(14038964-14039127)
chr4 (110-250)||(6190804-6190945)
chr4 (54-250)||(44102526-44102721)
chr4 (1-217)||(13812452-13812666)
chr4 (54-241)||(15091212-15091400)
chr4 (1-217)||(22633856-22634070)
chr4 (131-209)||(15868286-15868364)
chr4 (122-204)||(16597028-16597110)
chr4 (125-217)||(14052956-14053048)
chr4 (110-228)||(16239623-16239742)
chr4 (1-217)||(20156933-20157147)
chr4 (131-217)||(13416-13502)
chr4 (3-92)||(3332151-3332240)
chr4 (125-217)||(3097018-3097110)
chr4 (125-228)||(7089252-7089356)
chr4 (54-206)||(7799012-7799164)
chr4 (125-228)||(12903132-12903235)
chr4 (122-217)||(15552196-15552291)
chr4 (105-218)||(32851817-32851930)
chr4 (130-217)||(17047727-17047814)
chr4 (131-202)||(12287791-12287862)
chr4 (54-92)||(13616-13654)
chr4 (124-209)||(53081748-53081833)
chr4 (54-94)||(7089192-7089232)
chr4 (54-94)||(17047838-17047878)
chr4 (178-217)||(13569948-13569987)
chr4 (178-217)||(15094209-15094248)
chr4 (178-217)||(15121447-15121486)
chr4 (131-202)||(17333749-17333820)
chr4 (178-217)||(23843915-23843954)
chr4 (178-217)||(44676068-44676107)
chr4 (138-209)||(46640031-46640102)
chr4 (175-217)||(15124798-15124840)
chr4 (143-197)||(32306582-32306636)
chr4 (4-42)||(32851642-32851680)
chr4 (54-94)||(3096958-3096998)
chr4 (178-206)||(12570457-12570485)
chr4 (54-94)||(12903072-12903112)
chr4 (55-95)||(23374124-23374164)
[»] chr8 (65 HSPs)
chr8 (2-250)||(21673969-21674217)
chr8 (2-238)||(26355319-26355555)
chr8 (1-227)||(38854883-38855108)
chr8 (1-217)||(39834095-39834310)
chr8 (7-227)||(6520638-6520857)
chr8 (32-217)||(41598478-41598662)
chr8 (1-101)||(21285862-21285961)
chr8 (54-217)||(6759572-6759735)
chr8 (110-250)||(7373120-7373261)
chr8 (54-206)||(20536523-20536675)
chr8 (54-217)||(23406696-23406859)
chr8 (2-250)||(23760449-23760696)
chr8 (5-217)||(5865920-5866129)
chr8 (54-241)||(22875381-22875568)
chr8 (54-217)||(18878880-18879043)
chr8 (122-217)||(21491375-21491470)
chr8 (54-206)||(17141230-17141380)
chr8 (54-217)||(18818053-18818215)
chr8 (110-217)||(22627106-22627213)
chr8 (59-217)||(28648687-28648844)
chr8 (5-217)||(21249650-21249859)
chr8 (54-217)||(19801070-19801232)
chr8 (131-217)||(20499052-20499138)
chr8 (5-217)||(21255488-21255697)
chr8 (125-217)||(45130674-45130766)
chr8 (138-216)||(13507653-13507731)
chr8 (138-216)||(13597185-13597263)
chr8 (131-209)||(17266567-17266645)
chr8 (124-228)||(21918641-21918746)
chr8 (130-202)||(21414885-21414957)
chr8 (125-217)||(31971630-31971722)
chr8 (160-215)||(5610283-5610338)
chr8 (170-217)||(21286652-21286699)
chr8 (131-209)||(982977-983055)
chr8 (125-217)||(25362794-25362886)
chr8 (131-217)||(16199301-16199387)
chr8 (131-209)||(24353492-24353570)
chr8 (131-197)||(37116816-37116882)
chr8 (51-91)||(2418642-2418682)
chr8 (131-227)||(16799958-16800054)
chr8 (54-94)||(21918766-21918806)
chr8 (178-217)||(19899531-19899570)
chr8 (2-89)||(22381502-22381589)
chr8 (178-217)||(30642935-30642974)
chr8 (54-93)||(37116665-37116704)
chr8 (175-217)||(17353581-17353623)
chr8 (175-217)||(21389096-21389138)
chr8 (131-209)||(22365131-22365209)
chr8 (54-92)||(22419182-22419220)
chr8 (131-197)||(22996313-22996379)
chr8 (131-197)||(40492438-40492504)
chr8 (178-226)||(16409889-16409938)
chr8 (178-226)||(16860971-16861020)
chr8 (54-91)||(21967336-21967373)
chr8 (54-91)||(21980061-21980098)
chr8 (54-91)||(21985044-21985081)
chr8 (57-94)||(25362906-25362943)
chr8 (54-91)||(44493455-44493492)
chr8 (178-206)||(19976881-19976909)
chr8 (178-206)||(19983529-19983557)
chr8 (37-89)||(21414997-21415049)
chr8 (165-217)||(22010323-22010375)
chr8 (57-89)||(24353344-24353376)
chr8 (178-206)||(24756157-24756185)
chr8 (1-93)||(40492617-40492708)
[»] chr1 (51 HSPs)
chr1 (1-241)||(52927599-52927838)
chr1 (1-250)||(33681272-33681521)
chr1 (1-238)||(22237893-22238129)
chr1 (1-241)||(22921485-22921725)
chr1 (1-217)||(28194091-28194306)
chr1 (1-217)||(35981330-35981544)
chr1 (3-226)||(20637115-20637339)
chr1 (2-241)||(20248541-20248780)
chr1 (54-250)||(21754352-21754547)
chr1 (1-217)||(433272-433485)
chr1 (1-87)||(49261604-49261690)
chr1 (58-241)||(34510100-34510283)
chr1 (125-241)||(43697746-43697863)
chr1 (54-188)||(50209885-50210018)
chr1 (5-217)||(20918870-20919079)
chr1 (105-217)||(21342514-21342626)
chr1 (105-217)||(21347379-21347491)
chr1 (125-217)||(22355828-22355920)
chr1 (125-217)||(22357514-22357606)
chr1 (105-217)||(22532635-22532747)
chr1 (1-93)||(26065204-26065295)
chr1 (125-228)||(27250371-27250475)
chr1 (131-217)||(16759118-16759204)
chr1 (56-217)||(22354215-22354376)
chr1 (125-217)||(20846873-20846965)
chr1 (105-209)||(41049619-41049723)
chr1 (131-217)||(21895875-21895961)
chr1 (125-217)||(38801045-38801137)
chr1 (131-217)||(21861137-21861223)
chr1 (131-209)||(26065386-26065464)
chr1 (131-209)||(35260706-35260784)
chr1 (175-227)||(21714983-21715036)
chr1 (153-217)||(21301181-21301245)
chr1 (33-92)||(16758946-16759005)
chr1 (139-197)||(16381640-16381698)
chr1 (175-217)||(22468340-22468382)
chr1 (131-197)||(27652808-27652874)
chr1 (131-197)||(48521036-48521102)
chr1 (124-197)||(16367873-16367946)
chr1 (55-92)||(21861335-21861372)
chr1 (1-86)||(35260852-35260936)
chr1 (54-94)||(38801157-38801197)
chr1 (178-217)||(22831022-22831061)
chr1 (178-217)||(42864855-42864894)
chr1 (178-227)||(8761266-8761316)
chr1 (124-197)||(16093479-16093552)
chr1 (165-206)||(21787697-21787738)
chr1 (54-94)||(21162081-21162121)
chr1 (141-197)||(21533481-21533537)
chr1 (61-93)||(41049809-41049841)
chr1 (165-197)||(52940464-52940496)
[»] chr7 (67 HSPs)
chr7 (1-250)||(44014437-44014686)
chr7 (5-241)||(47832076-47832311)
chr7 (2-217)||(16219359-16219572)
chr7 (1-250)||(9389304-9389553)
chr7 (4-250)||(810738-810984)
chr7 (1-209)||(22073180-22073386)
chr7 (2-250)||(68010-68258)
chr7 (3-227)||(16324272-16324495)
chr7 (1-240)||(12756336-12756572)
chr7 (1-209)||(16056592-16056798)
chr7 (1-250)||(17061569-17061816)
chr7 (2-250)||(18005912-18006153)
chr7 (32-197)||(12255454-12255618)
chr7 (54-206)||(15143691-15143842)
chr7 (32-197)||(2279781-2279945)
chr7 (1-217)||(9751193-9751407)
chr7 (54-217)||(38227796-38227958)
chr7 (5-217)||(28504944-28505153)
chr7 (54-217)||(9509504-9509667)
chr7 (57-206)||(21064816-21064964)
chr7 (54-250)||(44116821-44117016)
chr7 (105-241)||(3563982-3564119)
chr7 (125-217)||(27847487-27847579)
chr7 (1-217)||(39267289-39267503)
chr7 (125-217)||(40443763-40443855)
chr7 (124-217)||(15754530-15754623)
chr7 (125-217)||(16385901-16385993)
chr7 (7-228)||(18302448-18302668)
chr7 (150-217)||(11995701-11995768)
chr7 (110-217)||(12699203-12699310)
chr7 (122-217)||(34201166-34201261)
chr7 (1-217)||(2831949-2832162)
chr7 (138-209)||(2529628-2529699)
chr7 (131-197)||(9177252-9177318)
chr7 (1-91)||(14045013-14045102)
chr7 (1-91)||(14355043-14355132)
chr7 (131-209)||(17017042-17017120)
chr7 (167-217)||(24054894-24054944)
chr7 (131-196)||(14045216-14045281)
chr7 (131-196)||(14355246-14355311)
chr7 (175-227)||(18154469-18154522)
chr7 (1-93)||(15008263-15008354)
chr7 (5-92)||(11995796-11995882)
chr7 (1-44)||(15754702-15754745)
chr7 (54-92)||(9177431-9177469)
chr7 (175-217)||(10508726-10508768)
chr7 (127-197)||(11768526-11768596)
chr7 (175-217)||(19649128-19649170)
chr7 (131-196)||(1867650-1867715)
chr7 (131-196)||(14036666-14036731)
chr7 (131-196)||(14346696-14346761)
chr7 (104-209)||(15008095-15008200)
chr7 (125-206)||(35366610-35366691)
chr7 (1-45)||(2529866-2529910)
chr7 (1-93)||(14036463-14036554)
chr7 (1-93)||(14346493-14346584)
chr7 (54-94)||(26212311-26212351)
chr7 (165-217)||(26212411-26212463)
chr7 (24-91)||(1867808-1867875)
chr7 (178-217)||(9703703-9703742)
chr7 (178-217)||(11880689-11880728)
chr7 (131-186)||(12901797-12901852)
chr7 (165-226)||(2760551-2760613)
chr7 (165-226)||(3272211-3272273)
chr7 (44-93)||(42462257-42462306)
chr7 (54-90)||(15113260-15113296)
chr7 (54-94)||(40443704-40443744)
[»] chr3 (69 HSPs)
chr3 (1-227)||(15471188-15471413)
chr3 (5-217)||(14234758-14234968)
chr3 (1-238)||(16097593-16097830)
chr3 (1-217)||(1465052-1465267)
chr3 (1-250)||(12933919-12934168)
chr3 (2-250)||(9513173-9513422)
chr3 (2-250)||(9521148-9521397)
chr3 (1-250)||(49667693-49667941)
chr3 (2-251)||(12171725-12171961)
chr3 (56-250)||(49389253-49389446)
chr3 (1-250)||(16104044-16104292)
chr3 (1-237)||(32307932-32308167)
chr3 (5-209)||(324503-324705)
chr3 (1-250)||(1644292-1644540)
chr3 (32-217)||(17247929-17248113)
chr3 (1-217)||(53070342-53070554)
chr3 (3-217)||(2050844-2051053)
chr3 (24-217)||(42386698-42386889)
chr3 (1-197)||(52523390-52523583)
chr3 (54-217)||(11424406-11424568)
chr3 (54-217)||(25476028-25476190)
chr3 (1-217)||(13209971-13210185)
chr3 (54-241)||(40213339-40213526)
chr3 (122-217)||(14179705-14179800)
chr3 (54-217)||(14572904-14573066)
chr3 (54-228)||(17488172-17488347)
chr3 (54-217)||(26687202-26687365)
chr3 (1-217)||(12340016-12340230)
chr3 (1-217)||(14665869-14666083)
chr3 (1-217)||(14735382-14735596)
chr3 (1-217)||(14669024-14669238)
chr3 (56-241)||(14973172-14973357)
chr3 (110-217)||(18438906-18439012)
chr3 (127-209)||(23275129-23275211)
chr3 (110-217)||(17499710-17499817)
chr3 (131-209)||(22109926-22110004)
chr3 (105-218)||(14501565-14501678)
chr3 (125-217)||(20698090-20698182)
chr3 (1-93)||(37250932-37251023)
chr3 (54-189)||(13442589-13442724)
chr3 (54-217)||(14576476-14576638)
chr3 (152-217)||(12399608-12399673)
chr3 (53-217)||(23083004-23083168)
chr3 (105-218)||(45797609-45797722)
chr3 (141-217)||(17247163-17247239)
chr3 (138-209)||(316595-316666)
chr3 (122-217)||(4588458-4588553)
chr3 (160-215)||(22791719-22791774)
chr3 (138-209)||(23412824-23412895)
chr3 (131-209)||(43927572-43927650)
chr3 (124-209)||(605942-606027)
chr3 (125-228)||(30030214-30030318)
chr3 (133-217)||(43842572-43842656)
chr3 (1-44)||(4588602-4588645)
chr3 (175-217)||(15877472-15877514)
chr3 (54-91)||(606135-606172)
chr3 (176-217)||(23052721-23052762)
chr3 (178-217)||(321658-321697)
chr3 (178-217)||(12173221-12173260)
chr3 (131-202)||(12378388-12378459)
chr3 (178-217)||(17524818-17524857)
chr3 (54-93)||(22110116-22110155)
chr3 (143-197)||(9578082-9578136)
chr3 (131-209)||(37250763-37250841)
chr3 (180-217)||(16369845-16369882)
chr3 (54-91)||(16839439-16839476)
chr3 (178-226)||(17674209-17674258)
chr3 (54-94)||(20698202-20698242)
chr3 (4-40)||(45797434-45797470)
[»] scaffold0556 (2 HSPs)
scaffold0556 (2-250)||(7075-7323)
scaffold0556 (1-217)||(8280-8494)
[»] chr5 (47 HSPs)
chr5 (1-217)||(5888818-5889033)
chr5 (1-227)||(21329127-21329353)
chr5 (1-250)||(21565807-21566056)
chr5 (13-250)||(22959142-22959379)
chr5 (2-250)||(19669163-19669412)
chr5 (1-217)||(21741186-21741401)
chr5 (1-197)||(22144315-22144508)
chr5 (1-209)||(26011685-26011891)
chr5 (32-250)||(11580854-11581072)
chr5 (1-250)||(36154437-36154684)
chr5 (1-217)||(22119836-22120050)
chr5 (54-217)||(1096783-1096945)
chr5 (54-217)||(21985790-21985952)
chr5 (58-217)||(23390139-23390298)
chr5 (3-217)||(21871214-21871426)
chr5 (3-217)||(21875494-21875706)
chr5 (125-217)||(21498660-21498752)
chr5 (54-217)||(24529536-24529699)
chr5 (54-217)||(25431710-25431872)
chr5 (54-217)||(9078268-9078430)
chr5 (54-217)||(13095810-13095972)
chr5 (122-217)||(19660480-19660575)
chr5 (54-217)||(25421848-25422010)
chr5 (1-95)||(21501918-21502010)
chr5 (1-206)||(24766991-24767194)
chr5 (125-217)||(21292624-21292716)
chr5 (57-217)||(24493887-24494046)
chr5 (131-217)||(20026506-20026592)
chr5 (131-209)||(22177794-22177872)
chr5 (150-217)||(22075419-22075486)
chr5 (125-217)||(8286496-8286588)
chr5 (54-206)||(13025626-13025777)
chr5 (175-217)||(23201802-23201844)
chr5 (175-217)||(37724337-37724379)
chr5 (54-91)||(25744037-25744074)
chr5 (129-197)||(26732421-26732489)
chr5 (178-217)||(18769648-18769687)
chr5 (178-217)||(21887260-21887299)
chr5 (150-217)||(22107027-22107094)
chr5 (175-206)||(23501000-23501031)
chr5 (130-197)||(26740234-26740301)
chr5 (54-91)||(15796738-15796774)
chr5 (54-90)||(19660606-19660642)
chr5 (54-94)||(21292736-21292776)
chr5 (54-94)||(22075334-22075374)
chr5 (54-94)||(22107139-22107179)
chr5 (178-206)||(23512543-23512571)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-250)||(45398-45648)
[»] scaffold1984 (1 HSPs)
scaffold1984 (5-241)||(397-633)
[»] scaffold0102 (2 HSPs)
scaffold0102 (2-250)||(19530-19778)
scaffold0102 (167-217)||(48104-48154)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-227)||(6876-7102)
scaffold0333 (1-227)||(14256-14482)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-240)||(13204-13442)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-227)||(15462-15688)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-250)||(3195-3444)
[»] scaffold0243 (1 HSPs)
scaffold0243 (4-227)||(5754-5976)
[»] scaffold0530 (1 HSPs)
scaffold0530 (4-227)||(660-888)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-209)||(32800-33006)
scaffold0034 (56-250)||(51493-51688)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-250)||(132916-133165)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-250)||(160948-161197)
scaffold0001 (54-91)||(162867-162904)
[»] scaffold0150 (1 HSPs)
scaffold0150 (2-250)||(32347-32595)
[»] chr2 (41 HSPs)
chr2 (25-227)||(25176129-25176331)
chr2 (1-250)||(22133826-22134073)
chr2 (1-196)||(28406242-28406436)
chr2 (54-250)||(32451538-32451735)
chr2 (57-217)||(23660341-23660500)
chr2 (54-217)||(298458-298620)
chr2 (56-217)||(27753892-27754053)
chr2 (54-228)||(22337431-22337605)
chr2 (110-206)||(22730887-22730983)
chr2 (54-206)||(23071617-23071767)
chr2 (1-217)||(23708262-23708474)
chr2 (54-217)||(22737823-22737986)
chr2 (54-209)||(23076757-23076910)
chr2 (125-228)||(23286236-23286340)
chr2 (1-93)||(23207543-23207634)
chr2 (125-217)||(23654053-23654145)
chr2 (138-217)||(28291945-28292024)
chr2 (131-217)||(19672294-19672380)
chr2 (131-217)||(18786451-18786537)
chr2 (127-197)||(23005193-23005263)
chr2 (131-209)||(23207746-23207824)
chr2 (131-197)||(39827602-39827668)
chr2 (152-217)||(37770-37835)
chr2 (125-217)||(20309480-20309572)
chr2 (167-206)||(22740615-22740654)
chr2 (167-206)||(22758370-22758409)
chr2 (131-209)||(20519767-20519845)
chr2 (131-209)||(22412710-22412788)
chr2 (24-93)||(20519957-20520026)
chr2 (40-93)||(22412900-22412953)
chr2 (1-93)||(23005015-23005105)
chr2 (178-217)||(22798770-22798809)
chr2 (54-89)||(31756233-31756268)
chr2 (175-206)||(44369954-44369985)
chr2 (178-217)||(45677799-45677838)
chr2 (159-217)||(7319-7377)
chr2 (54-91)||(23791592-23791629)
chr2 (54-94)||(37882-37922)
chr2 (54-94)||(23286176-23286216)
chr2 (138-209)||(25109364-25109436)
chr2 (181-217)||(40621852-40621888)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-250)||(28418-28667)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-250)||(130170-130419)
scaffold0010 (24-93)||(60479-60548)
scaffold0010 (131-209)||(60289-60367)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-209)||(10792-10998)
[»] scaffold0621 (3 HSPs)
scaffold0621 (2-250)||(6800-7048)
scaffold0621 (54-92)||(8786-8824)
scaffold0621 (143-217)||(8949-9023)
[»] scaffold0207 (1 HSPs)
scaffold0207 (2-250)||(2253-2500)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-217)||(9340-9554)
[»] scaffold0021 (7 HSPs)
scaffold0021 (90-250)||(62913-63073)
scaffold0021 (54-217)||(124900-125060)
scaffold0021 (177-228)||(175202-175254)
scaffold0021 (105-209)||(135942-136046)
scaffold0021 (5-93)||(136132-136219)
scaffold0021 (105-209)||(144650-144754)
scaffold0021 (5-93)||(144840-144927)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-239)||(1921-2159)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-241)||(2421-2660)
[»] scaffold0507 (1 HSPs)
scaffold0507 (3-209)||(7708-7912)
[»] scaffold0142 (1 HSPs)
scaffold0142 (54-250)||(17096-17292)
[»] scaffold0217 (1 HSPs)
scaffold0217 (54-238)||(16220-16405)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-217)||(1721-1933)
[»] scaffold0023 (4 HSPs)
scaffold0023 (57-251)||(101714-101907)
scaffold0023 (1-94)||(39937-40030)
scaffold0023 (173-241)||(39627-39696)
scaffold0023 (1-45)||(100639-100683)
[»] scaffold0116 (2 HSPs)
scaffold0116 (54-206)||(43438-43589)
scaffold0116 (54-206)||(47358-47509)
[»] scaffold0120 (3 HSPs)
scaffold0120 (54-241)||(32577-32764)
scaffold0120 (54-241)||(46241-46428)
scaffold0120 (113-189)||(16461-16537)
[»] scaffold0075 (3 HSPs)
scaffold0075 (1-217)||(7937-8151)
scaffold0075 (131-217)||(53114-53200)
scaffold0075 (54-92)||(53314-53352)
[»] scaffold0555 (3 HSPs)
scaffold0555 (139-241)||(10186-10289)
scaffold0555 (1-126)||(10274-10397)
scaffold0555 (165-217)||(1005-1057)
[»] scaffold0305 (1 HSPs)
scaffold0305 (54-217)||(20718-20881)
[»] scaffold0145 (1 HSPs)
scaffold0145 (54-228)||(39076-39249)
[»] scaffold0122 (2 HSPs)
scaffold0122 (54-217)||(25708-25870)
scaffold0122 (55-206)||(33148-33299)
[»] scaffold0016 (3 HSPs)
scaffold0016 (58-217)||(2170-2329)
scaffold0016 (1-217)||(207162-207376)
scaffold0016 (131-209)||(119202-119280)
[»] scaffold0011 (3 HSPs)
scaffold0011 (54-217)||(52227-52390)
scaffold0011 (131-228)||(167621-167719)
scaffold0011 (54-94)||(167745-167785)
[»] scaffold0278 (1 HSPs)
scaffold0278 (125-238)||(5979-6093)
[»] scaffold0627 (1 HSPs)
scaffold0627 (54-217)||(220-382)
[»] scaffold0503 (1 HSPs)
scaffold0503 (37-250)||(12228-12440)
[»] scaffold0031 (2 HSPs)
scaffold0031 (56-228)||(20057-20228)
scaffold0031 (175-217)||(65437-65479)
[»] scaffold0292 (2 HSPs)
scaffold0292 (54-241)||(658-845)
scaffold0292 (54-217)||(3785-3948)
[»] scaffold0228 (4 HSPs)
scaffold0228 (54-217)||(4823-4986)
scaffold0228 (54-217)||(12405-12568)
scaffold0228 (54-217)||(22357-22520)
scaffold0228 (178-217)||(18287-18326)
[»] scaffold0056 (3 HSPs)
scaffold0056 (54-206)||(16869-17020)
scaffold0056 (126-228)||(78993-79096)
scaffold0056 (1-81)||(79107-79185)
[»] scaffold0413 (2 HSPs)
scaffold0413 (54-217)||(15258-15420)
scaffold0413 (131-217)||(13036-13122)
[»] scaffold0175 (2 HSPs)
scaffold0175 (54-217)||(13407-13570)
scaffold0175 (54-217)||(34437-34598)
[»] scaffold1842 (2 HSPs)
scaffold1842 (131-228)||(691-789)
scaffold1842 (54-94)||(815-855)
[»] scaffold0876 (1 HSPs)
scaffold0876 (120-241)||(2703-2825)
[»] scaffold0161 (1 HSPs)
scaffold0161 (8-206)||(2099-2294)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-93)||(7841-7932)
scaffold0218 (5-205)||(28935-29132)
[»] scaffold0192 (1 HSPs)
scaffold0192 (5-217)||(10178-10388)
[»] scaffold0352 (1 HSPs)
scaffold0352 (110-217)||(17651-17758)
[»] scaffold0266 (1 HSPs)
scaffold0266 (110-217)||(18601-18708)
[»] scaffold0231 (1 HSPs)
scaffold0231 (113-250)||(23256-23394)
[»] scaffold0647 (1 HSPs)
scaffold0647 (57-206)||(5775-5924)
[»] scaffold0358 (4 HSPs)
scaffold0358 (132-228)||(318-415)
scaffold0358 (132-228)||(5094-5191)
scaffold0358 (56-94)||(253-291)
scaffold0358 (56-94)||(5029-5067)
[»] scaffold0357 (4 HSPs)
scaffold0357 (2-91)||(15866-15954)
scaffold0357 (127-202)||(3158-3233)
scaffold0357 (1-89)||(13395-13482)
scaffold0357 (105-209)||(13573-13677)
[»] scaffold0100 (1 HSPs)
scaffold0100 (54-206)||(20428-20579)
[»] scaffold0070 (1 HSPs)
scaffold0070 (105-206)||(4889-4990)
[»] scaffold0540 (1 HSPs)
scaffold0540 (105-217)||(656-768)
[»] scaffold0389 (1 HSPs)
scaffold0389 (133-228)||(13239-13335)
[»] scaffold0165 (6 HSPs)
scaffold0165 (105-217)||(27285-27397)
scaffold0165 (125-217)||(3856-3948)
scaffold0165 (125-217)||(7920-8012)
scaffold0165 (54-92)||(27485-27523)
scaffold0165 (54-94)||(3796-3836)
scaffold0165 (54-94)||(7860-7900)
[»] scaffold0351 (1 HSPs)
scaffold0351 (150-217)||(16679-16746)
[»] scaffold0347 (2 HSPs)
scaffold0347 (1-92)||(292-383)
scaffold0347 (124-217)||(413-505)
[»] scaffold0121 (1 HSPs)
scaffold0121 (110-217)||(8176-8282)
[»] scaffold0080 (2 HSPs)
scaffold0080 (54-217)||(40228-40389)
scaffold0080 (1-93)||(19649-19740)
[»] scaffold0026 (3 HSPs)
scaffold0026 (110-217)||(40227-40334)
scaffold0026 (111-217)||(39574-39680)
scaffold0026 (54-90)||(59271-59307)
[»] scaffold0395 (2 HSPs)
scaffold0395 (131-217)||(605-691)
scaffold0395 (125-206)||(8146-8227)
[»] scaffold0598 (2 HSPs)
scaffold0598 (125-241)||(681-798)
scaffold0598 (54-94)||(818-858)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-206)||(9488-9691)
[»] scaffold0718 (1 HSPs)
scaffold0718 (125-217)||(4785-4877)
[»] scaffold0639 (1 HSPs)
scaffold0639 (53-217)||(8789-8953)
[»] scaffold0456 (1 HSPs)
scaffold0456 (125-217)||(10080-10172)
[»] scaffold0427 (1 HSPs)
scaffold0427 (125-217)||(13870-13962)
[»] scaffold0320 (1 HSPs)
scaffold0320 (125-197)||(12381-12453)
[»] scaffold0273 (1 HSPs)
scaffold0273 (176-227)||(9070-9122)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-217)||(79975-80189)
[»] scaffold0003 (1 HSPs)
scaffold0003 (54-241)||(339569-339756)
[»] scaffold0235 (2 HSPs)
scaffold0235 (138-209)||(14038-14109)
scaffold0235 (125-206)||(11178-11259)
[»] scaffold0042 (2 HSPs)
scaffold0042 (54-217)||(23945-24107)
scaffold0042 (178-206)||(34565-34593)
[»] scaffold0022 (2 HSPs)
scaffold0022 (131-209)||(80730-80808)
scaffold0022 (54-93)||(128735-128774)
[»] scaffold0261 (4 HSPs)
scaffold0261 (5-206)||(15927-16125)
scaffold0261 (170-228)||(1768-1827)
scaffold0261 (104-218)||(17908-18022)
scaffold0261 (5-42)||(18159-18196)
[»] scaffold0123 (1 HSPs)
scaffold0123 (124-197)||(25567-25640)
[»] scaffold1257 (1 HSPs)
scaffold1257 (1-45)||(2030-2074)
[»] scaffold0586 (1 HSPs)
scaffold0586 (130-202)||(2244-2316)
[»] scaffold0403 (2 HSPs)
scaffold0403 (125-217)||(5223-5315)
scaffold0403 (54-94)||(5163-5203)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-217)||(12452-12665)
[»] scaffold0124 (1 HSPs)
scaffold0124 (7-217)||(24294-24502)
[»] scaffold0114 (3 HSPs)
scaffold0114 (125-217)||(15119-15211)
scaffold0114 (178-217)||(7726-7765)
scaffold0114 (170-217)||(32919-32966)
[»] scaffold0113 (1 HSPs)
scaffold0113 (125-217)||(32439-32531)
[»] scaffold0098 (4 HSPs)
scaffold0098 (138-218)||(29160-29240)
scaffold0098 (54-91)||(24529-24566)
scaffold0098 (4-41)||(26855-26892)
scaffold0098 (54-91)||(35399-35436)
[»] scaffold0088 (1 HSPs)
scaffold0088 (125-217)||(21276-21368)
[»] scaffold0076 (2 HSPs)
scaffold0076 (125-209)||(24171-24255)
scaffold0076 (1-93)||(24362-24453)
[»] scaffold0040 (2 HSPs)
scaffold0040 (105-209)||(103234-103338)
scaffold0040 (5-93)||(103403-103490)
[»] scaffold0109 (1 HSPs)
scaffold0109 (138-209)||(35521-35592)
[»] scaffold0476 (3 HSPs)
scaffold0476 (131-209)||(13235-13313)
scaffold0476 (131-227)||(8194-8290)
scaffold0476 (1-45)||(13031-13075)
[»] scaffold0130 (2 HSPs)
scaffold0130 (131-217)||(28928-29014)
scaffold0130 (131-217)||(1346-1432)
[»] scaffold0004 (2 HSPs)
scaffold0004 (167-217)||(70221-70271)
scaffold0004 (131-209)||(332784-332862)
[»] scaffold0198 (1 HSPs)
scaffold0198 (175-227)||(26834-26887)
[»] scaffold0167 (1 HSPs)
scaffold0167 (175-227)||(36024-36077)
[»] scaffold0131 (1 HSPs)
scaffold0131 (175-227)||(36891-36944)
[»] scaffold0737 (2 HSPs)
scaffold0737 (1-93)||(1562-1653)
scaffold0737 (143-209)||(1372-1438)
[»] scaffold0484 (1 HSPs)
scaffold0484 (125-217)||(1289-1381)
[»] scaffold0423 (1 HSPs)
scaffold0423 (165-217)||(10915-10967)
[»] scaffold0064 (1 HSPs)
scaffold0064 (125-228)||(47361-47465)
[»] scaffold0012 (1 HSPs)
scaffold0012 (125-189)||(227878-227942)
[»] scaffold0005 (1 HSPs)
scaffold0005 (131-207)||(268120-268196)
[»] scaffold1419 (1 HSPs)
scaffold1419 (54-89)||(339-374)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-92)||(85810-85900)
[»] scaffold1895 (1 HSPs)
scaffold1895 (175-217)||(892-934)
[»] scaffold0761 (1 HSPs)
scaffold0761 (175-217)||(5953-5995)
[»] scaffold0247 (1 HSPs)
scaffold0247 (131-217)||(6471-6557)
[»] scaffold0210 (2 HSPs)
scaffold0210 (175-217)||(21450-21492)
scaffold0210 (175-217)||(29342-29384)
[»] scaffold0139 (3 HSPs)
scaffold0139 (131-209)||(38765-38843)
scaffold0139 (177-217)||(20418-20458)
scaffold0139 (54-91)||(38635-38672)
[»] scaffold0101 (1 HSPs)
scaffold0101 (175-217)||(8601-8643)
[»] scaffold0014 (1 HSPs)
scaffold0014 (111-209)||(206099-206197)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-48)||(14506-14552)
scaffold0008 (178-226)||(30379-30428)
[»] scaffold0490 (2 HSPs)
scaffold0490 (125-217)||(2327-2419)
scaffold0490 (54-94)||(2267-2307)
[»] scaffold0309 (2 HSPs)
scaffold0309 (125-217)||(6985-7077)
scaffold0309 (54-94)||(6925-6965)
[»] scaffold0193 (2 HSPs)
scaffold0193 (125-217)||(13586-13678)
scaffold0193 (54-94)||(13526-13566)
[»] scaffold1124 (1 HSPs)
scaffold1124 (178-217)||(2312-2351)
[»] scaffold0615 (1 HSPs)
scaffold0615 (178-217)||(1728-1767)
[»] scaffold0324 (1 HSPs)
scaffold0324 (178-217)||(15837-15876)
[»] scaffold0311 (1 HSPs)
scaffold0311 (178-217)||(6722-6761)
[»] scaffold0215 (1 HSPs)
scaffold0215 (175-206)||(27256-27287)
[»] scaffold0111 (1 HSPs)
scaffold0111 (175-206)||(32867-32898)
[»] scaffold0043 (1 HSPs)
scaffold0043 (178-217)||(18676-18715)
[»] scaffold1403 (1 HSPs)
scaffold1403 (54-88)||(866-900)
[»] scaffold0297 (1 HSPs)
scaffold0297 (175-217)||(10465-10507)
[»] scaffold0077 (1 HSPs)
scaffold0077 (143-197)||(55271-55325)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-46)||(1347-1391)
[»] scaffold0301 (3 HSPs)
scaffold0301 (54-91)||(11937-11974)
scaffold0301 (54-91)||(15089-15126)
scaffold0301 (54-91)||(16337-16374)
[»] scaffold0282 (1 HSPs)
scaffold0282 (44-93)||(17931-17980)
[»] scaffold0015 (1 HSPs)
scaffold0015 (54-91)||(209240-209277)
[»] scaffold0006 (2 HSPs)
scaffold0006 (54-91)||(97322-97359)
scaffold0006 (54-91)||(106600-106637)
[»] scaffold1351 (1 HSPs)
scaffold1351 (57-93)||(326-362)
[»] scaffold0327 (1 HSPs)
scaffold0327 (165-217)||(689-741)
[»] scaffold0174 (1 HSPs)
scaffold0174 (178-206)||(18108-18136)
[»] scaffold0141 (1 HSPs)
scaffold0141 (54-94)||(39792-39832)
[»] scaffold0106 (2 HSPs)
scaffold0106 (165-217)||(1701-1753)
scaffold0106 (165-217)||(7678-7730)
[»] scaffold0096 (1 HSPs)
scaffold0096 (178-206)||(16004-16032)
[»] scaffold0081 (1 HSPs)
scaffold0081 (178-206)||(15107-15135)
[»] scaffold0049 (1 HSPs)
scaffold0049 (54-94)||(74980-75020)


Alignment Details
Target: chr6 (Bit Score: 161; Significance: 6e-86; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 27333141 - 27332927
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| |||| |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27333141 cgtgcgacaaggatcacatttaacctaa-caaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaact 27333043  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||  |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  27333042 cacaaaac-ttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggt 27332944  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||||||||||||||    
T  27332943 tcaacttaaaggtcaaa 27332927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 27393881 - 27393667
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| |||| |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27393881 cgtgcgacaaggatcacatttaacctaa-caaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaact 27393783  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||  |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  27393782 cacaaaac-ttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggt 27393684  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||||||||||||||    
T  27393683 tcaacttaaaggtcaaa 27393667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 19652458 - 19652707
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||| ||||||||| | ||| ||||||| |  ||  ||||||||||| |||||||||||||||||||||||||||| ||| |    
T  19652458 cgtgcgacaaagatcgcatttatcctaaacaaggtattttgtaactagttagcccgcgaggcgagagcctctactcgccatggcgagttcaggtacaatt 19652557  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || |||| |||||||||||| |||||||| |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||||||| |||||     
T  19652558 cacaaaa-attcattctaaagtctttccaggttcaatctcattcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacatttaagga 19652656  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  19652657 tcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctc 19652707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 23019675 - 23019885
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    |||||||||||||||||||||||| ||| ||||| ||||| ||| ||  ||||||||| |||||||||||||||||||||||||||||||| |||||  |    
T  23019675 cgacaaagatcgcatttaacctaaccaa-gcattttgtaattggacaactcgcgaggcaagggcctctactcgccatggcgagttcaggtgtaactccca 23019773  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    ||| ||||||||| |||   ||||| |||||| |||| ||||||||||||||| ||||| || | |||||||||||||||||||| ||||||||||||||    
T  23019774 aaa-attcattcttaaaatattccaggttcaatctcaatctaaaatctttcctaatcattatcacacatgttcaggcactcaaaagcatctaaggttcaa 23019872  T
Q  205 cttaaaggtcaaa 217  Q
    ||||| |||||||    
T  23019873 cttaagggtcaaa 23019885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 25644587 - 25644821
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   ||||||||||| |||||||| ||| |||||  ||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  25644587 cgtgcgacaaagatcgcaaa-aacctaaacaa-gcattctgaaaccgggcaactcgcgaggcgagggcctctactcgctatggcgagttcgggtgtaact 25644684  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |  ||||| | |||||| |||   || || |||||| |||| ||||||||||||||| |||| | |||||||||  ||||||||||||||||||||||||    
T  25644685 cccaaaaa-tccattcttaaactatttcaggttcaatctcaatctaaaatctttcctaatcaacgttatacatgaacaggcactcaaaaacatctaaggt 25644783  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctc 237  Q
    |||||||||||||| |||||||||||||  ||||||||    
T  25644784 tcaacttaaaggtcaaaattacgaaatcatgatagctc 25644821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4668070 - 4667856
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| ||||||||||||||||  ||| ||||||||||| |||| || |||||||||||| |||||||||||||||||||||||||||| ||  |    
T  4668070 cgtgcgacaaggatcgcatttaacctag-caaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagtt 4667972  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||| ||||||||||| |||||||| || ||| |||| |||| | |||||||| ||| | |||| || ||||||||||||||||| |||||||||     
T  4667971 cacaaaaa-ttcattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaaggg 4667873  T
Q  201 tcaacttaaaggtcaaa 217  Q
    ||| || ||| ||||||    
T  4667872 tcatctcaaaagtcaaa 4667856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4674917 - 4674703
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| ||||||||||||||||  ||| ||||||||||| |||| || |||||||||||| |||||||||||||||| |||||| |||| ||  |    
T  4674917 cgtgcgacaaggatcgcatttaacctag-caaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagttaaggttcagtt 4674819  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||| ||||||||||| |||||||| || ||| |||| |||| | |||||||| ||| | |||| || ||||||||||||||||| |||||||||     
T  4674818 cacaaaaa-ttcattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaaggg 4674720  T
Q  201 tcaacttaaaggtcaaa 217  Q
    ||| || ||| ||||||    
T  4674719 tcatctcaaaagtcaaa 4674703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 4189220 - 4189416
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| ||||||||||||||||  ||| ||||||||||| |||| || |||||||||||| |||||||||||||||| |||||| |||| ||  |    
T  4189220 cgtgcgacaacgatcgcatttaacctag-caaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagtttaggttcagtt 4189318  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaagg 199  Q
    || |||| |||||||||||| |||||||| || ||| |||| |||| | |||||||| ||| | |||| || ||||||||||||||||| |||||||||    
T  4189319 cacaaaa-attcattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaagg 4189416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4185680 - 4185466
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||| ||| ||||||||||||||||  ||| ||||||| ||| |||| || |||||||||||| |||||||||||||||||||||||||||| ||  |    
T  4185680 cgtgcggcaaggatcgcatttaacctag-caaggcattctataaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagtt 4185582  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||| ||||||||||| |||||||| |||||| |||| |||| | |||||| | ||| | |||| || |||||| |||||||||| |||||||||     
T  4185581 cacaaaaa-ttcattctaaactctttccaggttcaatctcactctacattctttcataatcgttattagacttgttcatgcactcaaaagcatctaaggg 4185483  T
Q  201 tcaacttaaaggtcaaa 217  Q
    ||| || ||| ||||||    
T  4185482 tcatctcaaaagtcaaa 4185466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 250
Target Start/End: Original strand, 18457014 - 18457226
Alignment:
Q  37 ttctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaa 136  Q
    |||||||| ||||||  |||||||||||| |||||||||||||||||| ||||||||| || ||   ||||| |||||||| || |  | ||| ||||||    
T  18457014 ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggt-cagcttccaaaaagttcattcttaattaat-ccaggttcaa 18457111  T
Q  137 cctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact-taaaggtcaaattacgaaatctggatagc 235  Q
     ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| ||||||  |||| | |||| ||||||| ||||||||    
T  18457112 tctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagttaaaatcacgaaatttggatagc 18457211  T
Q  236 tctctgctcctgctc 250  Q
    |||||| || |||||    
T  18457212 tctctggtcatgctc 18457226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 28496330 - 28496127
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||        |||||||||||| |||||| |||||||||||||||||||||   | |    
T  28496330 cgtgcgacaaagatcgcatt-aacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagatt 28496232  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |  ||||  ||||||||||  |||||||| |||||| ||||||||| | ||||| || ||||| |||| |||||||||||||||||||| |||||||||     
T  28496231 ctcaaaagtttcattctaag-tctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagga 28496133  T
Q  201 tcaact 206  Q
    ||||||    
T  28496132 tcaact 28496127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 29808741 - 29808537
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||        |||||||||||| |||||| |||||||||||||||||||||   | |    
T  29808741 cgtgcgacaaagatcgcatt-aacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagatt 29808643  T
Q  101 cataaaaaattcattctaaaa-tctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaagg 199  Q
    |  |||   |||||||||||| |||||||| |||||| ||||||||| | ||||| || ||||| |||| |||||||||||||||||||| |||||||||    
T  29808642 cccaaagt-ttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 29808544  T
Q  200 ttcaact 206  Q
     ||||||    
T  29808543 atcaact 29808537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 22080542 - 22080355
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||  | ||  ||| |||| |||   ||||| |||||| || | |||  ||||||    
T  22080542 tcgcgaggcgagagcctctactcgccatggcgagttcaggtataactcccataag-ttcgttcttaaactattccaggttcaatcttaatctctaatctt 22080444  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa-ttacgaaatctggatagctctctg 241  Q
    | || ||||| |||| |||||||||| |||||||||||||||||||||||||| |||| | ||| ||||||||||| ||||||||||||    
T  22080443 ttctaatcattattagacatgttcagtcactcaaaaacatctaaggttcaactaaaagtttaaagttacgaaatctagatagctctctg 22080355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 241
Target Start/End: Complemental strand, 25956424 - 25956239
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttc 155  Q
    |||||||||| |||||||||||||||||||| | |||||| |||||  ||||||| |||||| |||   ||||| ||| || |||| |||| |||||||     
T  25956424 gcgaggcgagagcctctactcgccatggcgaatacaggtgtaactcc-aaaaaatccattcttaaactattccaggttaaatctcaatctagaatctttt 25956326  T
Q  156 cttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |  ||| | |||| ||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||  || |||||||||    
T  25956325 ccaatcgtaattagacatgttcaggcactcaaaaatatctaagattcaacttaaaagtcaaaattacgaaatcatgacagctctctg 25956239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 241
Target Start/End: Complemental strand, 19303343 - 19303159
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcc 156  Q
    ||||||||| |||||| |||||| ||||||||||||||   | |   ||||  ||||||||||| ||||| || |||||| ||||||||| | |||||||    
T  19303343 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaa-tcttttcaggttcaatctcattctacattctttcc 19303245  T
Q  157 ttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    | ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||| |||| ||||||||| |  |||||||||    
T  19303244 taatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatcttgcaagctctctg 19303159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 217
Target Start/End: Complemental strand, 18409628 - 18409470
Alignment:
Q  58 gaggcgagggcctctactcgccatggcgagttcaggtgc-aactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcc 156  Q
    |||||||| |||||| |||||| ||||||||||||||   || ||| ||||  ||||||||||| |||||||| |||||| ||||||||| | |||||||    
T  18409628 gaggcgagagcctctgctcgccgtggcgagttcaggtcagaattca-aaaagtttcattctaaa-tctttccaggttcaatctcattctacattctttcc 18409531  T
Q  157 ttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    | ||||| | || ||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  18409530 taatcattaatagacatgttaaggcactcaaaagcatctaaggatcaactcaaaggtcaaa 18409470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 22779977 - 22779870
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| |||||||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||    
T  22779977 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaa 22779878  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  22779877 aagtcaaa 22779870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 20638029 - 20637925
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacga 223  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||    
T  20638029 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacga 20637930  T
Q  224 aatct 228  Q
    |||||    
T  20637929 aatct 20637925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 29060856 - 29061007
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||| | |||||||||||||| ||  |    |||| ||||||||| |||||||||| |||||| ||||| ||| | || |    
T  29060856 tcgcgaggcgagagcctctactcgtcgtggcgagttcaggt-cagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattcct 29060954  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| ||||| |||  |||||||||||||||||||| ||||||||| ||||||    
T  29060955 tcctaatcattattggacatgttcaggcactcaaaagcatctaaggatcaact 29061007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 1561688 - 1561781
Alignment:
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||||| |||||||||   |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  1561688 tttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 1561781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 18821565 - 18821448
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacga 223  Q
    ||||| |||||| ||||| ||| | ||| |||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||| |||| ||||    
T  18821565 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaatcacga 18821466  T
Q  224 aatctggatagctctctg 241  Q
    ||| ||||||||| ||||    
T  18821465 aatttggatagctttctg 18821448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 20360706 - 20360614
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  20360706 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggatcaactgaaaagtcaaa 20360614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 17287546 - 17287439
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| |||||||||| || ||| | ||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||    
T  17287546 ttcattctacaatctttccaggtacaatcacatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagggtcaactcaa 17287447  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  17287446 aagtcaaa 17287439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 25629160 - 25628998
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| ||||||| ||||||| |||||   | ||| ||||  || |||||||||| |||||| |||||| ||||||||| ||| ||    
T  25629160 tcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagttt-attctaaaatatttccaggttcaatctcattctacaatatt 25629062  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| | || | ||||| |||| || || |||||||||||||||||| ||| ||||||    
T  25629061 tcctaatcattaatagagatgtttaggcgcttaacaacatctaaggttcaactaaaaagtcaaa 25628998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19668637 - 19668728
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||| || |||||||||||| ||| |  |||||||| ||| ||| |||||||||||| |||||||||||| ||||||||||||||    
T  19668637 cgtgcgacaaaggtcacatttaacctaa-caaggtgttctgtaattggacagctcgcgaggcgagagcctctactcgctatggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 20594089 - 20594240
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| | |||||||||||| ||  |    |||| || |||||| |||||||||| |||||| ||||| ||| | ||||    
T  20594089 tcgcgaggcgagagcctctgctcgccgtagcgagttcaggt-cagatttccaaaagtttattctacaatctttccaggttcaatctcatcctacattctt 20594187  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
     ||| |||||  ||| ||||||| |||||||||||||||||||||| ||||||    
T  20594188 ccctaatcatatttagacatgtttaggcactcaaaaacatctaaggatcaact 20594240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 20109607 - 20109685
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| |||||||||||||||||||||| || ||||||| |||||||||||    
T  20109607 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcatctaaagttcaacttaa 20109685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 21939647 - 21939861
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| |||| ||||||||||||||||  ||||||||||       | |||||||||||| |||||| ||||||||||||||||||| |   | |    
T  21939647 cgtgcgacaaggatcacatttaacctaaacaagacattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagatt 21939745  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  || |||||||  |||||||| | |||| ||||| ||| | |||||||| ||||  |||| ||||||||||||||||||   ||||||||||    
T  21939746 ctccaaagttttattctaag-tctttccaggctcaatctcatcctacattctttcctaatcaatattacacatgttcaggcactcaagggcatctaaggt 21939844  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  21939845 tcaactcaaaagtcaaa 21939861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 31155255 - 31155041
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| || |||||||||||||| ||| ||||  |||||  ||| || |||||||||||| |||||| |||||||||| |||| ||||| | | |    
T  31155255 cgtgcgacaaggaccgcatttaacctaa-caaggcatgttgtaaaggggtagctcgcgaggcgagagcctctgctcgccatggagagtacaggttc-att 31155158  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |  ||  ||||| || |   ||||||||| |||||| ||||||||| | |||||||  ||| | |||| || | ||||||||||||||| |||||||||     
T  31155157 cccaaggaattcgttttctgatctttccaggttcaatctcattctacattctttcccaatcgttattagacttattcaggcactcaaaagcatctaaggg 31155058  T
Q  201 tcaacttaaaggtcaaa 217  Q
    ||| || ||| ||||||    
T  31155057 tcatctcaaaagtcaaa 31155041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 22439227 - 22439277
Alignment:
Q  167 tatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| ||||||    
T  22439227 tatacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 22439277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 18696962 - 18697034
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaa-catctaaggttcaacttaa 209  Q
    |||| ||||||| ||| ||| ||||| ||||||||| |||||||||||||||| ||||||| |||||||||||    
T  18696962 ctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaatcatctaaagttcaacttaa 18697034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 22334577 - 22334513
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa-ttacgaaatct 228  Q
    |||| |||||||||||||||||||  |||||||||||||||| ||| |||||| |||||||||||    
T  22334577 attagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaatttacgaaatct 22334513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1561566 - 1561609
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaa 44  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  1561566 cgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaa 1561609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 16920354 - 16920287
Alignment:
Q  150 tctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| || ||||| |||| |||| ||||||||||||||| |||||||||||||||| ||| ||||||    
T  16920354 tcttttctaatcattattagacatattcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 16920287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 25611429 - 25611366
Alignment:
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||  |||||||||||||||| ||| ||||||    
T  25611429 tcctaatcattattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaa 25611366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 25641877 - 25641838
Alignment:
Q  167 tatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  25641877 tatacatcttcaggcactcaaaaacatctaaggttcaact 25641838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 33443520 - 33443591
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||| ||||||||||| ||| ||||| ||| ||||| ||||||||||||||| ||||||| |||| ||||||    
T  33443520 ctcaatctaaaatcttgcctaatcattattgtacatattcaggcactcaaaatcatctaaagttcgacttaa 33443591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 19863413 - 19863455
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  19863413 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 19863455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 22432677 - 22432727
Alignment:
Q  167 tatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||| ||||||    
T  22432677 tatacatcttcatgcactcaaaaacatctaaggttcaactcaaaagtcaaa 22432727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 35008618 - 35008684
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| |||||  ||||||||||||||||||| ||||||||||||    
T  35008618 gttcaatctcagtctaaaaacttgcctaatcattcttatacatgttcaggcacttaaaaacatctaa 35008684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 17106049 - 17106086
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17106049 tcgcgagtcgagggcctctactcgccatggcgagttca 17106086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 18177471 - 18177438
Alignment:
Q  58 gaggcgagggcctctactcgccatggcgagttca 91  Q
    ||||||||||||||||||||||||||||||||||    
T  18177471 gaggcgagggcctctactcgccatggcgagttca 18177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 18204400 - 18204433
Alignment:
Q  58 gaggcgagggcctctactcgccatggcgagttca 91  Q
    ||||||||||||||||||||||||||||||||||    
T  18204400 gaggcgagggcctctactcgccatggcgagttca 18204433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 15894125 - 15894073
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| |||||||||||||||||||  |||||||||||||||| ||| ||||||    
T  15894125 attagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaa 15894073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 16830112 - 16830263
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||||||||||| |||||||| ||||  ||| | | || ||| |||||| |    ||||| ||||||| ||||||||||||  ||    
T  16830112 tcgcgaggcgagagcctctactcgccacggcgagttaaggtaaaacgc-tcaagaatccattctgactcatttccgagttcaatctcattctaaaacttt 16830210  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
     ||| ||||| ||  ||||||||||||| |||  ||||||| |||||| ||||    
T  16830211 gcctaatcattatggtacatgttcaggccctcgtaaacatccaaggttaaact 16830263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 18706713 - 18706785
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaa-catctaaggttcaacttaa 209  Q
    |||| ||||||| ||| ||| ||||| ||||||||| ||||| |||||||||| ||||||| |||||||||||    
T  18706713 ctcaatctaaaaacttgcctaatcattattatacatattcagacactcaaaaatcatctaaagttcaacttaa 18706785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 18821625 - 18821585
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  18821625 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt 18821585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 22405748 - 22405700
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaattacgaaat 226  Q
    |||||||| ||| |||||||||||||||| ||| |||||||||||||||    
T  22405748 aggcactctaaagcatctaaggttcaactcaaaagtcaaattacgaaat 22405700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 11185922 - 11185981
Alignment:
Q  170 acatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaat-tacgaaatct 228  Q
    |||||||||||||||||||  |||||||||||||||| |||  |||||| ||||||||||    
T  11185922 acatgttcaggcactcaaaggcatctaaggttcaactcaaaaatcaaatatacgaaatct 11185981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 18180925 - 18180964
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  18180925 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 18180964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 21739705 - 21739666
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  21739705 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 21739666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 206
Target Start/End: Complemental strand, 22059429 - 22059398
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||||||||||||||||||||||||||||||    
T  22059429 ttcaggcactcaaaaacatctaaggttcaact 22059398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 17106180 - 17106246
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| |||||  |||||||| ||||||||||||||| |||||||    
T  17106180 gttcaatctcagtctaaaaacttgcctaatcattcttatacatattcaggcactcaaaatcatctaa 17106246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 91
Target Start/End: Complemental strand, 18199212 - 18199182
Alignment:
Q  61 gcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||||||||||||||||||||||    
T  18199212 gcgagggcctctactcgccatggcgagttca 18199182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 19668868 - 19668918
Alignment:
Q  159 atcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||| || |||||||||||| |||||| ||||||||||||||| ||||||    
T  19668868 atcattatgatacatgttcagacactcagaaacatctaaggttcgacttaa 19668918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 20224412 - 20224478
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| |||||  |||| ||||||||||||||||||| |||||||    
T  20224412 gttcaatctcaatctaaaaacttgcctaatcattcttatgcatgttcaggcactcaaaatcatctaa 20224478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 22118396 - 22118462
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| |||||  |||| ||||||||||||||||||| |||||||    
T  22118396 gttcaatctcaatctaaaaacttgcctaatcattcttatgcatgttcaggcactcaaaatcatctaa 22118462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 11185820 - 11185857
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  11185820 cgaggcgagggcctctgctcgccgtggcgagttcaggt 11185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 15685836 - 15685755
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||| |||||||||||||| | ||| ||||| |   ||||||||||||| |||| ||||| | |||||| ||||    
T  15685836 ttccaagttcaatctcattctaaaatcatgcctaatcattaaggtacatgttcaggccctcacaaacacccaaggttaaact 15685755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 35008466 - 35008503
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  35008466 tcgcgaggcgagagcctctactcgctatggcgagttca 35008503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 15041246 - 15041194
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| |||| ||||||||||||||||||||||||||  |||| ||| ||||||    
T  15041246 attaaacatcttcaggcactcaaaaacatctaaggtataactcaaaagtcaaa 15041194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 16920439 - 16920399
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||| ||||||| |||||| |||||||||||||||||||||    
T  16920439 tcgcaaggcgagagcctctgctcgccatggcgagttcaggt 16920399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 20078030 - 20077938
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||||||||||||   | |||||||||  |  ||||  |||| |||| |||||||||||||  |||||||||| ||| ||||||||||    
T  20078030 cgtgcgacaaagatcgcaagaaccctaaacaagactgtctgacactgtgcagctcgcgaggcgaggcactctactcgctatgacgagttcagg 20077938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 20360766 - 20360726
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  20360766 tcgcgaggcgagagcctcagctcgccatggcgagttcaggt 20360726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 22831817 - 22831857
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  22831817 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 22831857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 22831917 - 22831969
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| |||||||||  ||||||||| |||||||||||||||| ||| ||||||    
T  22831917 attagacatgttcaaacactcaaaagcatctaaggttcaactcaaaagtcaaa 22831969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 23527908 - 23527872
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  23527908 gcgaggcgagggcctctactcgctatggtgagttcag 23527872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 25611529 - 25611489
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| ||| |||||||||||||||||    
T  25611529 tcgcgaggcgagagcctctgctctccatggcgagttcaggt 25611489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 8846637 - 8846888
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||| |||||||  |||||||||||| |  || |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  8846637 cgtgcgacaaagatcgcatttaacataaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttaaggtgcaact 8846736  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || |||||||||||||||||||||||||| |||||| ||||||||  |||||||||| ||||| |||| ||||||||||| |||||||||||||||||      
T  8846737 cacaaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggtactcaaaaacatctaagaa 8846836  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctca 251  Q
    |||||| ||| ||| ||||||||||||||||||||||||||| || ||||||    
T  8846837 tcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctca 8846888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 39706145 - 39705920
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39706145 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaact 39706046  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |    ||||||| |||| |||   ||||| |||||| || | |||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  39706045 c--tcaaaattcgttcttaaactattccaggttcaatcttaatcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggt 39705948  T
Q  201 tcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||| |||||||||||||    
T  39705947 tcaacttaaaggtcaaaattacgaaatc 39705920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 15099615 - 15099828
Alignment:
Q  3 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactca 102  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||  || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15099615 tgcgacaaagatcgcttttaacctaaacaagacattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactca 15099714  T
Q  103 taaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
      ||||||||||||| |||   ||||| |||||| |||| |||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  15099715 -caaaaattcattcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacatctaaggttc 15099813  T
Q  203 aacttaaaggtcaaa 217  Q
     ||||||||||||||    
T  15099814 gacttaaaggtcaaa 15099828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15190580 - 15190805
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||  || |||||||||||| |||||||||||||||||||||| ||| || |||     
T  15190580 cgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagtacagatgtaacg 15190679  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   ||||| ||| || |||| |||| || |||| || ||||| |||| |||||||||||||||||||||||||||||||    
T  15190680 c-ccaaaaatccattcttaaactattccaggttaaatctcaatctagaaccttttctaatcataattagacatgttcaggcactcaaaaacatctaaggt 15190778  T
Q  201 tcaacttaaaggtcaaattacgaaatc 227  Q
    || |||||||||||||| ||| |||||    
T  15190779 tcgacttaaaggtcaaactacaaaatc 15190805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 12774262 - 12774510
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| ||||||||||||||||||||| ||| ||||||||        |||||||||||| |||||| ||||||||||||||||||||| ||  |    
T  12774262 cgtgcgacaaggatcgcatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagtt 12774361  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |  | ||||||||||||||  ||| |||| |||||| ||||||||  ||||||| || ||||| |||| ||||||||||||||||||||||||||||||     
T  12774362 c--acaaaattcattctaacgtctctccaggttcaatctcattctccaatcttttctaatcattattagacatgttcaggcactcaaaaacatctaagga 12774459  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||||||||||||||| ||||||||||| || |||||    
T  12774460 tcaactcaaaagtcaaaattacgaaatctgaatagctctctggtcatgctc 12774510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 52243049 - 52242856
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| ||||||||||||||||||  |||||||||||| |||||||||||| |||||||||||||||| ||||    
T  52243049 cgtgcgacaaagatcgcaaa-atcctaaacaa-gcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaact 52242952  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |   || ||| |||||| |||   ||||| |||||| ||||||||| |||||||||| ||||| ||||||||||||||||||||| ||| |||||||    
T  52242951 c-ccaacaatgcattcttaaactattccaggttcaatctcattctagaatctttcctgatcattattatacatgttcaggcactcgaaatcatctaa 52242856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 217
Target Start/End: Complemental strand, 15464764 - 15464572
Alignment:
Q  24 cctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatc 123  Q
    |||||||||  |||||||||||||||||  |||||||||||| |||||||||||| |||| ||||||||||| ||| |  ||||| | |||||| |||      
T  15464764 cctaaacaagtcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggtgtaacacccaaaaa-tccattcttaaact 15464666  T
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
     || || |||||| |||| ||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||   ||||||||| |||||||    
T  15464665 atttcaggttcaatctcaatctaaaatctttcctaatcattattatacatattcaggcactcaaaatcatctaaatatcaacttaagggtcaaa 15464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 44928779 - 44928566
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| ||||||||||||||||    |||||||||||| |||||| ||||||||||||||||| |||   | |    
T  44928779 cgtgcgacaaagatcgcaaa-atcctaaacaa-gcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttctggtcagatt 44928682  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |  |||   |||||||||||||||||||| |||||| ||||||||| | |||||||| ||||| |||| | |||||||||||||||||||||| |||||     
T  44928681 cccaaagt-ttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagatatgttcaggcactcaaaaacatataagga 44928583  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  44928582 tcaactcaaaagtcaaa 44928566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 21815465 - 21815241
Alignment:
Q  24 cctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatc 123  Q
    ||||||||| || |||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||| || ||   ||||| |||||||| || |     
T  21815465 cctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattcttaatta 21815368  T
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaatt-acg 222  Q
     | ||| |||||   |||||||||| | |||||| ||||| |||| |||||||||| ||||||||| ||||||||| |||||| ||| |||||| | |||    
T  21815367 at-ccaggttcattatcattctaaattatttcctaatcattattaaacatgttcagacactcaaaagcatctaaggatcaactcaaaagtcaaaatcacg 21815269  T
Q  223 aaatctggatagctctctgctcctgctc 250  Q
    |||| |||||||||||||| || |||||    
T  21815268 aaatttggatagctctctggtcatgctc 21815241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 241
Target Start/End: Complemental strand, 21815136 - 21814921
Alignment:
Q  24 cctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatc 123  Q
    ||||||||| || |||||||| ||||||  |||||||||||| ||||||||||||||||||||||||| || || ||   ||||| |||||||| || |     
T  21815136 cctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattcttaatta 21815039  T
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaatt-acg 222  Q
     | ||| |||||   |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| ||||||||| |||||| ||| |||||| | |||    
T  21815038 at-ccaggttcattatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaaggatcaactcaaaagtcaaaatcacg 21814940  T
Q  223 aaatctggatagctctctg 241  Q
    |||| ||||||||||||||    
T  21814939 aaatttggatagctctctg 21814921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 241
Target Start/End: Complemental strand, 21818558 - 21818343
Alignment:
Q  24 cctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatc 123  Q
    ||||||||| || |||||||| ||||||  |||||||||||| ||||||||||||||||||||||||| || || ||   ||||| |||||||| || |     
T  21818558 cctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagt-cagcttccaaaaagttcattcttaatta 21818461  T
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaatt-acg 222  Q
     | ||| |||||   |||||||||| |||||||| ||||| |||| |||||||||| ||||||||| ||||||||| |||||| ||| |||||| | |||    
T  21818460 at-ccaggttcattatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaaggatcaactcaaaagtcaaaatcacg 21818362  T
Q  223 aaatctggatagctctctg 241  Q
    |||| ||||||||||||||    
T  21818361 aaatttggatagctctctg 21818343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 217
Target Start/End: Complemental strand, 43198380 - 43198231
Alignment:
Q  67 gcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcat 166  Q
    |||||||||||| |||| ||||||||||| |||||  ||||| |  ||||| |||   ||||| |||||| |||| ||||||||||||||| ||||| ||    
T  43198380 gcctctactcgctatggtgagttcaggtgtaactcccaaaaa-tcaattcttaaactattccatgttcaatctcaatctaaaatctttcctaatcattat 43198282  T
Q  167 tatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    || |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  43198281 tacacatgttcaggcactcaaaaacatctaaggtttaacttaagggtcaaa 43198231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 24029005 - 24029219
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||       | |||||||||||| |||||| ||||||||||||||||||| |   | |    
T  24029005 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagatt 24029103  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  ||||||||||  |||||||| |||||| ||||| ||| | |||||| | ||||  |||| ||||||||||||||||||| |||||||||||    
T  24029104 ctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattctttcataatcaatattagacatgttcaggcactcaaagacatctaaggt 24029202  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  24029203 tcaactcaaaagtcaaa 24029219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 227
Target Start/End: Original strand, 13844855 - 13845028
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||||||||||||||| ||| |||||| |||||  ||||| | |||||| |||   ||||| ||| || ||   |||| ||||||    
T  13844855 tcgcgaggcgagagcctctactcgccatggcaagtacaggtgtaactcccaaaaa-tccattcttaaactattccaggttaaatcttgatctagaatctt 13844953  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatc 227  Q
    | || ||||| |||| |||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  13844954 ttctaatcataattagacatgttcagacactcaaaaacatctaaggttcaacttaaaagtcaaaattacgaaatc 13845028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 14038964 - 14039127
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| |||||||||| |||   | |   ||||  |||||||||||||||||| | |||||| ||||||||| | ||||    
T  14038964 tcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatctttctaggttcaatctcattctacattctt 14039063  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||  ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  14039064 tccaaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 14039127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 6190804 - 6190945
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| |||||||||| |||||| ||||| ||| | ||| |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||    
T  6190804 ttcattctacaatctttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaactcaa 6190903  T
Q  210 aggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    | ||| |||| | ||||| |||||||||||||| || |||||    
T  6190904 aagtcaaaatcatgaaatttggatagctctctggtcatgctc 6190945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 44102526 - 44102721
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||||||||||||||||||   | || | |||  || |||||||||||| |||| |||||| ||||| ||| | ||||    
T  44102526 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattc-tcaaagttttattctaaaatctatccaggttcaatctcatcctacattctt 44102624  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
     | | ||||| |||| ||||| |||||||||||||| ||||||||| |||||| ||| ||| |||| ||||||| |||||||||||||| || |||||    
T  44102625 -cataatcattattaaacatgctcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatttggatagctctctggtcatgctc 44102721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13812666 - 13812452
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||       | |||||||||||| |||||| |||||||||||||||| | ||   | |    
T  13812666 cgtgcgacaaagatcacatttaacctaaacaaagcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttta-gtcagatt 13812568  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  |||||||| || |||||||| |||||| ||||| ||| | | |||||| ||||  |||| |||||||||| ||||||||  ||||||||||    
T  13812567 ctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattatttcctaatcaatattagacatgttcagacactcaaaggcatctaaggt 13812469  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  13812468 tcaactcaaaagtcaaa 13812452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 15091212 - 15091400
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | |   ||||  |||||||||||||| ||||| |||||| ||||||||| | ||||    
T  15091212 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattctacattctt 15091311  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |||| ||||  |||| ||||||||||  |||||||| ||||||| | |||||| ||| ||| |||| ||||||||| |  |||||||||    
T  15091312 tcctaatcaatattagacatgttcagaaactcaaaagcatctaaagatcaactcaaaagtcaaaatcacgaaatcttgcaagctctctg 15091400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 22634070 - 22633856
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||      | |||||||||||| |||||| ||||||||||||||||||  |   | |    
T  22634070 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-atctgatt 22633972  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
        |||  |||||||| || |||||||| |||||| ||||| ||| | |||||||| ||||  |||| ||||||||||||||||||   ||||||| ||    
T  22633971 atccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaagggcatctaaagt 22633873  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  22633872 tcaactcaaaagtcaaa 22633856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 15868364 - 15868286
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  15868364 gttcaatctcaatctaaaaactttcctaatcattattatacatattcaggcactcaaaatcatctaaggttcaacttaa 15868286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 16597028 - 16597110
Alignment:
Q  122 tctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||||||| |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||    
T  16597028 tctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 16597110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 14053048 - 14052956
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||| ||||| ||| | |||||||| ||||| |||| |||| ||||||||||||||| |||||||||||||||| ||| ||||||    
T  14053048 ttccaagttcaatctcatcctacattctttcctaatcattattagacatattcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 14052956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 16239742 - 16239623
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaat-ctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaactta 208  Q
    ||||||||||| |||||||| |||||| ||||||||| | | ||||||| ||||| |||| |||||||||||||||||||| |||||||||  ||||| |    
T  16239742 ttcattctaaa-tctttccaggttcaatctcattctacatttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggagcaactca 16239644  T
Q  209 aaggtc-aaattacgaaatct 228  Q
    || ||| ||||||||||||||    
T  16239643 aaagtcaaaattacgaaatct 16239623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20157147 - 20156933
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||| |||||||       | |||||||||||| |||||| | |||||||||||||||| ||   | |    
T  20157147 cgtgcgacaaagatcgcatttaacctaaacaaggcactctgtaatactagtgctcgcgaggcgagagcctctgcacgccatggcgagttca-gtcatatt 20157049  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    | | |||  |||||||| ||  ||||||| |||||| ||||| ||| | |||||||| ||||  |||| |||||||||||||||||||  |||||||||     
T  20157048 cttcaaagtttcattct-aagcctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaagga 20156950  T
Q  201 tcaacttaaaggtcaaa 217  Q
    | |||| ||| ||||||    
T  20156949 ttaactcaaaagtcaaa 20156933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 13502 - 13416
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||    
T  13502 gttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagttcaacttaagggtcaaa 13416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 3332151 - 3332240
Alignment:
Q  3 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    |||||||||||||||||||||||||||||| |||||||||||       | |||||||||||| |||||| |||||||||||||||||||    
T  3332151 tgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttcag 3332240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 3097018 - 3097110
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||| ||||||||||||||| |||| ||| ||||||    
T  3097018 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcgaaaacatctaaggtttaactcaaaagtcaaa 3097110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 7089252 - 7089356
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacga 223  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| ||||||||||||||||| |  |||||||||||||||| ||| ||| |||||||||    
T  7089252 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcataggcatctaaggttcaactcaaaagtcaaaattacga 7089351  T
Q  224 aatct 228  Q
    |||||    
T  7089352 aatct 7089356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 7799012 - 7799164
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | |  || ||  ||||||||| || ||||||| |||||| ||||| ||| | | |     
T  7799012 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatactacaagtttcattctacaaactttccaggttcaatctcatcctacattatg 7799111  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| ||||| ||||  ||||||||||||||||||| ||||||||| ||||||    
T  7799112 tcctaatcattattagtcatgttcaggcactcaaaagcatctaaggatcaact 7799164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 12903132 - 12903235
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacga 223  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||| ||| |||||||||||||||| ||| ||| |||||||||    
T  12903132 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactc-aaagcatctaaggttcaactcaaaagtcaaaattacga 12903230  T
Q  224 aatct 228  Q
    |||||    
T  12903231 aatct 12903235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 15552196 - 15552291
Alignment:
Q  122 tctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||| || ||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||| |||||||||||| ||| ||||||    
T  15552196 tctttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatataaggttcaactcaaaagtcaaa 15552291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 32851817 - 32851930
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||||| |||| | ||| ||| ||| || ||| |||| ||||||| |||  || ||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  32851817 aaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgtctaatcattattatacatattcaggcactcaaaatcatctaaggttcaa 32851916  T
Q  205 cttaaaggtcaaat 218  Q
    ||||| || |||||    
T  32851917 cttaagggacaaat 32851930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 17047814 - 17047727
Alignment:
Q  130 agttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||| ||||| ||| | | |||||| ||||| ||||  |||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  17047814 agttcaatctcatcctacattttttcctaatcattattagtcatgttcaggcactcaaagacatctaaggttcaactcaaaagtcaaa 17047727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 12287862 - 12287791
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||||||||| |||| | |||||||||||||||    
T  12287862 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcagacacttagaaacatctaaggttc 12287791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 13654 - 13616
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  13654 tcgcgaggcgagggcctctactcgctatggcgagttcag 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 53081833 - 53081748
Alignment:
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||||| |||| ||||||| ||| | | ||||| |||||||||||| ||||||||| || ||||||| |||| ||||||    
T  53081833 tttccaggttcaatctcaatctaaaaacttgcttaatcattattatacatgtttaggcactcagaatcatctaaagttcgacttaa 53081748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 7089192 - 7089232
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  7089192 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt 7089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 17047878 - 17047838
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  17047878 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt 17047838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 13569948 - 13569987
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  13569948 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 13569987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 15094209 - 15094248
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  15094209 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 15094248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 15121486 - 15121447
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  15121486 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 15121447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 17333749 - 17333820
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
    |||||| |||| ||||||| ||| ||| ||||| ||| ||||| ||||||||||||||| ||||||| ||||    
T  17333749 gttcaatctcaatctaaaaacttgcctaatcattattgtacatattcaggcactcaaaatcatctaaagttc 17333820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 23843915 - 23843954
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  23843915 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 23843954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 44676068 - 44676107
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  44676068 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 44676107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 46640102 - 46640031
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||| ||||||| ||| ||| ||||| ||| |||||||||||||||||| || ||||||| |||| ||||||    
T  46640102 ctcaatctaaaaacttgcctaatcattattttacatgttcaggcactcagaatcatctaaagttcgacttaa 46640031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 15124840 - 15124798
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||    
T  15124840 ttcaggcactcaaaaatatctaaggttcgactcaaaggtcaaa 15124798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 32306636 - 32306582
Alignment:
Q  143 tctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||| ||| ||| ||||| |||||||||||| |||||||||||| |||||||    
T  32306636 tctaaaaacttgcctaatcattattatacatgtttaggcactcaaaaccatctaa 32306582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 32851642 - 32851680
Alignment:
Q  4 gcgacaaagatcgcatttaacctaaacaaagcattctgt 42  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  32851642 gcgacaaagatcgcatttaacctaaaccaggcattctgt 32851680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 3096958 - 3096998
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  3096958 tcgcgaggcgagagcctctgctcgccttggcgagttcaggt 3096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 12570457 - 12570485
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||||||||||||||||||||    
T  12570457 aggcactcaaaaacatctaaggttcaact 12570485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 12903072 - 12903112
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||| | ||||||||||||| ||||||||||||||    
T  12903072 tcgcgaggcgggagcctctactcgccgtggcgagttcaggt 12903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 23374164 - 23374124
Alignment:
Q  55 cgcgaggcgagggcctctactcgccatggcgagttcaggtg 95  Q
    ||||||||||| |||||| |||||| |||||||||||||||    
T  23374164 cgcgaggcgagagcctctgctcgccgtggcgagttcaggtg 23374124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 5e-77; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 21673969 - 21674217
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||  | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21673969 gtgcgacaaagatcgcatttatcctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 21674068  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    |  ||| ||||||||||||||||||||| |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||||| || |||| |    
T  21674069 a-caaatattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacgtccaaggat 21674167  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  21674168 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctc 21674217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 26355555 - 26355319
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| |  || ||| |||||||| |||||||||||||||||| ||||||||| ||| ||    
T  26355555 gtgcgacaaagatcgcatttaacataaacaaggcattctgtaactagttagctcgtgaggcgagagcctctactcgccatggcaagttcaggtacaattc 26355456  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    |  |||||||||||||||| |||||||| |||||| |||| |||  ||||| |||| ||||| |||| |||||||||||||||||||||||| ||||| |    
T  26355455 a-caaaaattcattctaaagtctttccaggttcaatctcaatcttcaatctctcctaatcattattagacatgttcaggcactcaaaaacatttaaggat 26355357  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctct 238  Q
    ||||| ||| ||| ||||||||||||||||||||||||    
T  26355356 caactcaaaagtcaaaattacgaaatctggatagctct 26355319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 38855108 - 38854883
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||  |||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38855108 cgtgcgacaaagatcgtgtttaacctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaact 38855009  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |    ||||||| |||| |||   ||||| ||| || || | |||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  38855008 c--tcaaaattcgttcttaaactattccaggttaaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggt 38854911  T
Q  201 tcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||| |||||||||||||    
T  38854910 tcaacttaaaggtcaaaattacgaaatc 38854883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 39834095 - 39834310
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  39834095 cgtgggacaaagatcgcatttaacttaaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaact 39834194  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  ||| ||||||||| |||   ||||| |||||| |||| |||| |||||||||| ||||| || ||||| ||| |||||||||||||||||||||||    
T  39834195 ca-caaagattcattcttaaactattccaggttcaatctcaatctacaatctttcctaatcattatcatacaagtttaggcactcaaaaacatctaaggt 39834293  T
Q  201 tcaacttaaaggtcaaa 217  Q
    || ||||||||||||||    
T  39834294 tcgacttaaaggtcaaa 39834310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 6520638 - 6520857
Alignment:
Q  7 acaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaa 106  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||| | ||    
T  6520638 acaaagatcgcatttaacctaa-caaagcattctgtaattgggcagtttgcgaggcgagggcctctactcgccatggcgaattcaggtctaactc-tcaa 6520735  T
Q  107 aaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| |||||| |||   || || |||||  || | |||  |||||||||| || || |||| |||||||||| ||||||||||||||||||||||||||    
T  6520736 aaatccattcttaaactatttcaggttcagtcttaatctccaatctttcctaattattattagacatgttcagacactcaaaaacatctaaggttcaact 6520835  T
Q  207 taaaggtc-aaattacgaaatc 227  Q
    |||||||| |||||||||||||    
T  6520836 taaaggtcaaaattacgaaatc 6520857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 41598478 - 41598662
Alignment:
Q  32 aagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaag 131  Q
    ||||||||||||||| ||    |||||||||||| |||||| |||||||||||||||||||||   | ||  |||   |||||||||||||||||||| |    
T  41598478 aagcattctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagt-ttcattctaaaatctttccagg 41598576  T
Q  132 ttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| ||||||||| | |||||| | ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  41598577 ttcaatctcattctacattctttcataatcattattagacatgttcaggcactcaaaagcatctaagggtcaactcaaaagtcaaa 41598662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21285862 - 21285961
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||| ||||    
T  21285862 cgtgcgataaagatcgcatttaacctaa-caaagcattctgtaactgggcaacttgcgaggcgagggcctctactcgccatagcgagttcaggtgtaact 21285960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 6759572 - 6759735
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | |   ||||  ||||||||||||| ||||||||||||| ||||||||| | ||||    
T  6759572 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattctacattctt 6759671  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| ||||||||| |||||||||| ||||||||| |||||| ||| ||||||    
T  6759672 tcctaatcattattagacatgttcaagcactcaaaagcatctaaggatcaactcaaaagtcaaa 6759735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 250
Target Start/End: Original strand, 7373120 - 7373261
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| |||||||||| ||||||  |||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||    
T  7373120 ttcattctacaatctttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaa 7373219  T
Q  210 aggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    | ||| |||||||||||| |||||||||||||| || |||||    
T  7373220 aagtcaaaattacgaaatttggatagctctctggtcatgctc 7373261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 20536523 - 20536675
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||    
T  20536523 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcctacattctt 20536622  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| ||||| || | |||||||||||||||||||| ||||||||||||||||    
T  20536623 tcctaatcattatcagacatgttcaggcactcaaaagcatctaaggttcaact 20536675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 23406696 - 23406859
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | ||  | ||  ||||||||| |||||||||| || ||| ||||| ||| | ||||    
T  23406696 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggtccaatctcatcctacattctt 23406795  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  23406796 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 23406859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 23760696 - 23760449
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||||| ||||| ||| ||||| ||||||| | || ||||||||||||||||||||||||||| |||| |||||||||  |||||    
T  23760696 gtgcgacaaagatcgcatttatcctaa-caaggcattttgtaactagtcaattcgcgaggcgagggcctctactcgccttggcaagttcaggtataactc 23760598  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
       | || ||| |||| |||   ||||| |||||| |||| | |  ||| |||||| ||||| |||| ||||||||||| ||||||||||||  | || |    
T  23760597 -ccacaagttcgttcttaaactattccaggttcaatctcaatatccaatatttcctaatcattattagacatgttcaggaactcaaaaacattcagggat 23760499  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||| |||||||| ||| |||||| ||||||| || |||||    
T  23760498 caactcaaaagtcaaaattacgtaatatggataactctctggtcatgctc 23760449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 5866129 - 5865920
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    |||||||||||||||| |||||||| || ||||||||||||      | |||||||||||| |||||| ||||||||||||||||| |||   | ||       
T  5866129 cgacaaagatcgcattcaacctaaa-aaggcattctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctct 5866032  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||  ||||||||||  ||||| || |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||    
T  5866031 aaattttcattctaag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 5865933  T
Q  205 cttaaaggtcaaa 217  Q
    || ||| ||||||    
T  5865932 ctcaaaagtcaaa 5865920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 22875381 - 22875568
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||| ||||||||||||||||   | ||  |||   |||||||||||||||||||| |||||||||| ||||| ||||||    
T  22875381 tcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaagt-ttcattctaaaatctttccaggttcaacctcgttctacaatctt 22875479  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |||| ||||| |||| ||||||| || | ||||||| ||||||||| | |||| ||||||| |||| ||||||||| |  |||||||||    
T  22875480 tcctaatcattattaaacatgtttagacgctcaaaagcatctaaggattaactcaaaggtcaaaatcacgaaatcttgcaagctctctg 22875568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 18879043 - 18878880
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||| | ||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||    
T  18879043 tcgcgaggcgagagcctctgctcgtcttggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctt 18878944  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  18878943 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 18878880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 21491375 - 21491470
Alignment:
Q  122 tctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| | |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  21491375 tctttctaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaaaagtcaaa 21491470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 17141230 - 17141380
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| ||||||||||||||||| |||   | ||   |||  ||||||||||  ||||| || |||||| ||||||||| | ||||    
T  17141230 tcgcgaggcgagagcctctgctcgccatggcgagttc-ggtctgattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattctt 17141327  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  17141328 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 17141380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 18818215 - 18818053
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt--gcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatc 151  Q
    |||||||||||| |||||| |||||| ||||||||||||||  | |||    ||||  |||||| || |||||||||| |||||| ||||| ||| | |     
T  18818215 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaaacc---aaaagtttcattttacaatctttccaggttcaatctcatcctacattt 18818119  T
Q  152 tttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  18818118 tttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 18818053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 22627106 - 22627213
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| |||||||| | |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||    
T  22627106 ttcattctacaatctttcgaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaa 22627205  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  22627206 aagtcaaa 22627213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 217
Target Start/End: Complemental strand, 28648844 - 28648687
Alignment:
Q  59 aggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcctt 158  Q
    ||||||| |||||| |||||| ||||||||||||||  || |   |||   ||||||||||| |||||||| |||||| ||||| ||| | |||||| |     
T  28648844 aggcgagagcctctgctcgccgtggcgagttcaggtcaaaattcaaaaggtttcattctaaa-tctttccatgttcaatctcatcctacattctttcata 28648746  T
Q  159 atcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  28648745 atcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 28648687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 21249650 - 21249859
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    ||||||||||||||||||||||||| || ||||||||||||      | |||||||||||| |||||| ||||||||||||||||| |||   | ||       
T  21249650 cgacaaagatcgcatttaacctaaa-aaggcattctgtaacacaaatgctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctcc 21249747  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||  ||||||| ||  |||||||| |||||  ||||| ||| | |||||||| ||||| |||| |||||||  ||||||||||| ||||||||||||||    
T  21249748 aaattttcattccaag-tctttccaggttcagtctcatcctacattctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaa 21249846  T
Q  205 cttaaaggtcaaa 217  Q
    || ||| ||||||    
T  21249847 ctcaaaagtcaaa 21249859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 19801232 - 19801070
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||   | || ||| |||| |||   ||||| |||||| || |||||  | ||||    
T  19801232 tcgcgaggcgaggacctctactcgccatggcgagttcaggtataactc-ccacaagttcgttcttaaactattccaggttcaatcttattctctagtctt 19801134  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| ||||||||||||||||| |  ||||||||| |||||| ||| ||||||    
T  19801133 tcctaatcattattagacatgttcaggcactcatatgcatctaaggatcaactcaaaagtcaaa 19801070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 20499052 - 20499138
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||||||||||||||||||| ||||||| |||||||| || |||||||    
T  20499052 gttcaatctcaatctaaaaacttacctaatcattattatacatgttcaggcactcaaaatcatctaaagttcaactcaagggtcaaa 20499138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 21255488 - 21255697
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    ||||||||||||||||||||||||| || |||||||||||       | |||||||||||| ||| || ||||||||||||||||| |||   | ||       
T  21255488 cgacaaagatcgcatttaacctaaa-aaggcattctgtaatacaaatgctcgcgaggcgagagccgctgctcgccatggcgagttc-ggtcagattctcc 21255585  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||  ||||||| ||  |||||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||  ||||||||||| ||||||||||||||    
T  21255586 aaattttcattccaag-tctttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaa 21255684  T
Q  205 cttaaaggtcaaa 217  Q
    || ||| ||||||    
T  21255685 ctcaaaagtcaaa 21255697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 45130766 - 45130674
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||| | ||| ||||||    
T  45130766 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaattcaaaagtcaaa 45130674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 13507731 - 13507653
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaa 216  Q
    |||| ||||||| |||  || ||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  13507731 ctcaatctaaaaacttgtctaatcattattatacatattcaggcactcaaaatcatctaaggttcaacttaagggtcaa 13507653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 13597263 - 13597185
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaa 216  Q
    |||| ||||||| |||  || ||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  13597263 ctcaatctaaaaacttgtctaatcattattatacatattcaggcactcaaaatcatctaaggttcaacttaagggtcaa 13597185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 17266645 - 17266567
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||||||||||| |||| ||||||    
T  17266645 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaacatctaaagttcgacttaa 17266567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 21918746 - 21918641
Alignment:
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacg 222  Q
    |||||| |||||| ||| | ||| | ||||| || ||||| |||| |||||||||||||||| ||| |||||||||||||||| ||| ||| ||||||||    
T  21918746 tttccaggttcaatctcttcctacattcttttctaatcattattagacatgttcaggcactccaaagcatctaaggttcaactcaaaagtcaaaattacg 21918647  T
Q  223 aaatct 228  Q
    ||||||    
T  21918646 aaatct 21918641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 21414957 - 21414885
Alignment:
Q  130 agttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
    ||||||| ||||||||| |||||||||| ||||| | | | ||| ||||||||||||||||||||||||||||    
T  21414957 agttcaatctcattctacaatctttcctaatcattagtgtgcatcttcaggcactcaaaaacatctaaggttc 21414885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 31971630 - 31971722
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| |  ||||||| ||||| |||| |||||||||||||| ||||| |||||||||||||||| ||| ||||||    
T  31971630 ttccaggttcaatctcatcctacatcctttcctaatcattattagacatgttcaggcacacaaaagcatctaaggttcaactcaaaagtcaaa 31971722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 5610338 - 5610283
Alignment:
Q  160 tcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtca 215  Q
    ||||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  5610338 tcatcatcatacaagttcagacactcaaaaacatctaaggttcgacttaaaggtca 5610283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 21286652 - 21286699
Alignment:
Q  170 acatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  21286652 acatgttcaggcacttaaaaacatctaaggttcaacttaagggtcaaa 21286699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 983055 - 982977
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||||||| ||||  | ||||||||||||| ||||||||| ||||||| |||||||||||    
T  983055 gttcaatctcaatctaaaaactttcctaatcactaatatacatgttcagacactcaaaatcatctaaagttcaacttaa 982977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 25362886 - 25362794
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| ||||  ||||||||| ||||||||  |||||||||||||||| ||| ||||||    
T  25362886 ttccaggttcaatctcatcctacattctttcctaatcattattagtcatgttcagtcactcaaaggcatctaaggttcaactcaaaagtcaaa 25362794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 16199387 - 16199301
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| ||||| ||| | |||||||| ||||| || | ||||||| |||||||||||| |||| ||||||||||| ||| ||||||    
T  16199387 gttcaatctcatcctacattctttcctaatcattataagacatgttaaggcactcaaaagcatccaaggttcaactcaaaagtcaaa 16199301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 24353492 - 24353570
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| |||||||||||||||  |||||| |||| ||||||    
T  24353492 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaattatctaaagttcgacttaa 24353570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 37116816 - 37116882
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| |||||||    
T  37116816 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatctaa 37116882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 2418682 - 2418642
Alignment:
Q  51 agttcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  2418682 agttcgcgaggcgagggcctctgctcgctatggcgagttca 2418642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 16799958 - 16800054
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaattacgaaatc 227  Q
    |||||| |||| ||||||| | | ||| |||||  |||||||| ||||||||||||||||||||||| | || |||||| ||| |||| || |||||    
T  16799958 gttcaatctcaatctaaaaacctgcctaatcattcttatacatattcaggcactcaaaaacatctaaagctcgacttaagggttaaatcacaaaatc 16800054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 21918806 - 21918766
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  21918806 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt 21918766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 19899531 - 19899570
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  19899531 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 19899570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 22381589 - 22381502
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagtt 89  Q
    |||||||||||||||||   | ||||||||| ||  ||||  |||| |||||||||||||||||   |||||||||| ||||||||||    
T  22381589 gtgcgacaaagatcgcaagaaccctaaacaaggctgtctgacactgtgcagttcgcgaggcgagccactctactcgctatggcgagtt 22381502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 30642974 - 30642935
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  30642974 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 30642935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 37116665 - 37116704
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  37116665 tcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 17353623 - 17353581
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||    
T  17353623 ttcagggactcaaaaacatctaaggttcaactcaaaagtcaaa 17353581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 21389138 - 21389096
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||| |||||||||||||||| ||| ||||||    
T  21389138 ttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 21389096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 22365131 - 22365209
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| |  |||||||||||| ||||||| |||| ||||||    
T  22365131 gttcaaactcaatctaaaaacttgcctaatcattattatacatatctaggcactcaaaatcatctaaagttcgacttaa 22365209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 22419220 - 22419182
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  22419220 tcgcgaggtgagggcctctactcgctatggcgagttcag 22419182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 22996313 - 22996379
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| |||||  |||||||| ||||||||||||||| |||||||    
T  22996313 gttcaatctcaatctaaaaacttgcctaatcattcttatacatattcaggcactcaaaatcatctaa 22996379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 40492504 - 40492438
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| |||||  |||||||| ||||||||||||||| |||||||    
T  40492504 gttcaatctcaatctaaaaacttgcctaatcattcttatacatattcaggcactcaaaatcatctaa 40492438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 16409938 - 16409889
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaat 226  Q
    |||||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  16409938 aggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 16409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 16861020 - 16860971
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaat 226  Q
    |||||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  16861020 aggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 16860971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 21967373 - 21967336
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  21967373 tcgcgaggcgagcgcctctactcgctatggcgagttca 21967336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 21980098 - 21980061
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  21980098 tcgcgaggcgagcgcctctactcgctatggcgagttca 21980061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 21985081 - 21985044
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  21985081 tcgcgaggcgagcgcctctactcgctatggcgagttca 21985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 25362943 - 25362906
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  25362943 cgaggcgagagcctctgctcgccatggcgagttcaggt 25362906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 44493492 - 44493455
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  44493492 tcgcgaggcgagcgcctctactcgctatggcgagttca 44493455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 19976881 - 19976909
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||||||||||||||||||||    
T  19976881 aggcactcaaaaacatctaaggttcaact 19976909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 19983529 - 19983557
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||||||||||||||||||||    
T  19983529 aggcactcaaaaacatctaaggttcaact 19983557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 21415049 - 21414997
Alignment:
Q  37 ttctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagtt 89  Q
    |||||||| ||| ||  |||||||||||| | |||||||||||||||||||||    
T  21415049 ttctgtaattggacaactcgcgaggcgagaggctctactcgccatggcgagtt 21414997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 22010375 - 22010323
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| |||| || |||||||||||| |||||||||||||||| ||| ||||||    
T  22010375 attaaacatcttaaggcactcaaaagcatctaaggttcaactaaaaagtcaaa 22010323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 24353344 - 24353376
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagtt 89  Q
    |||||||||||||||||||||| ||||||||||    
T  24353344 cgaggcgagggcctctactcgctatggcgagtt 24353376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 24756157 - 24756185
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||||||||||||||||||||    
T  24756157 aggcactcaaaaacatctaaggttcaact 24756185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 40492708 - 40492617
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||||||||||||   | ||||||||| | |||||| | ||| |||| |||||||||| |   |||||||||| ||||||||||||||    
T  40492708 cgtgcgacaaagatcgcaaa-atcctaaacaaggtattctgaatctgtgcagctcgcgaggcgggccactctactcgctatggcgagttcagg 40492617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 5e-77; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 52927838 - 52927599
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  ||||    
T  52927838 cgtgcgacaaagatcgcatttaacctaa-caaggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtctaact 52927740  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
      |||||||||||||| |||||||||||| |||||| ||||||||  |||||||| | ||||| |||| ||||||||||||||||||||||||||||||     
T  52927739 t-taaaaaattcattccaaaatctttccaggttcaatctcattctccaatctttcataatcattattagacatgttcaggcactcaaaaacatctaaggg 52927641  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |||||| ||| ||| |||||||||||||||||||||||||||    
T  52927640 tcaactcaaaagtcaaaattacgaaatctggatagctctctg 52927599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 33681272 - 33681521
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||| ||||||||||||||||||| ||| ||| ||| |||||||||||| | ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  33681272 cgtgtgacaaagatcgcatttaacataagcaaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaact 33681371  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  ||||||||||||||||||||||||| |||||| ||||||||  |||||||||| ||||| |||| |||| |||||| ||||||||||||||||||     
T  33681372 ca-caaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatattcaggaactcaaaaacatctaagga 33681470  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| |||||||||||||||| |||||||||| || |||||    
T  33681471 tcaactcaaaagtcaaaattacgaaatctgggtagctctctggtcatgctc 33681521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 22237893 - 22238129
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22237893 cgtgcgaaaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaagtgcaact 22237992  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |  | ||||||||||| |||||||||||| ||| || ||||||||  |||||||||| | ||| |||| ||||||||||||||||||||| ||||||||     
T  22237993 c--acaaaattcattccaaaatctttccaggtttaatctcattctccaatctttcctaaccattattagacatgttcaggcactcaaaaatatctaagga 22238090  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctct 238  Q
    |||||| ||| ||| |||||||||||| |||||||||||    
T  22238091 tcaactcaaaagtcaaaattacgaaatatggatagctct 22238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 22921725 - 22921485
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||  ||||    
T  22921725 cgtgcgacaaagatcgcatttaacccaaacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgccatggcgagttcaagtctaact 22921626  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    | | |||||||| |||| |||   ||||  |||||| |||| |||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  22921625 c-tcaaaaattcgttcttaaactattcctggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggt 22921527  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |||||| ||||||| |||||||||||||  || |||||||||    
T  22921526 tcaactcaaaggtcaaaattacgaaatcatgacagctctctg 22921485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 28194306 - 28194091
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||| ||||||||||||  |||| ||||| |||| || |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  28194306 cgtgcgacaaagatcgcatgtaacctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctctacttgccatggcgagttcaggtgcaact 28194207  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  ||| ||||||||| |||   || || |||||| |||| |||| |||||||||| |||||||| ||||| ||||||||||||||||||||| |||||    
T  28194206 ca-caaagattcattcttaaactatttcaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacatccaaggt 28194108  T
Q  201 tcaacttaaaggtcaaa 217  Q
    || ||||||||||||||    
T  28194107 tcgacttaaaggtcaaa 28194091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 35981544 - 35981330
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| |  || |||||||||||| |||||||||| |||||||||||||||||||||||    
T  35981544 cgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaact 35981445  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  | |||||| |||| |||   | ||| |||||| |||| |||| |||||||||| |||||||| ||||| ||||||||||||||||||||| |||||    
T  35981444 ca-cataaattcgttcttaaactatcccaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacatc-aaggt 35981347  T
Q  201 tcaacttaaaggtcaaa 217  Q
    || ||||||||||||||    
T  35981346 tcgacttaaaggtcaaa 35981330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 20637115 - 20637339
Alignment:
Q  3 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactca 102  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||   || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20637115 tgcgacaaagatcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactca 20637214  T
Q  103 taaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactc-aaaaacatctaaggtt 201  Q
      |||||||| |||| |||   ||||| |||||| || | |||  |||||||||| |||||||||||||| ||  |||||||| ||||||||| ||||||    
T  20637215 -caaaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcattatacaagtctaggcactcaaaaaacatccaaggtt 20637313  T
Q  202 caacttaaaggtc-aaattacgaaat 226  Q
    ||||||||||||| ||||||||||||    
T  20637314 caacttaaaggtcaaaattacgaaat 20637339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 241
Target Start/End: Original strand, 20248541 - 20248780
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    |||||||||  ||||||||||||||||| || ||||||||||||| |  || |||||||||||  |||||||||||||||||||||||||||| ||  ||    
T  20248541 gtgcgacaagaatcgcatttaacctaaataaggcattctgtaactagttagctcgcgaggcgatagcctctactcgccatggcgagttcaggttcagttc 20248640  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    | |||| |||||||||||| ||| |||| |||||| ||||||||   ||||||||| ||||| |||| ||||||||||||||||||||||||||| || |    
T  20248641 acaaaa-attcattctaaagtctctccaggttcaatctcattctccgatctttcctaatcattattagacatgttcaggcactcaaaaacatctatggat 20248739  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    ||||| ||| ||| ||||| |||||| ||| ||||||||||    
T  20248740 caactcaaaagtcaaaatttcgaaatttgggtagctctctg 20248780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 21754352 - 21754547
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||  ||  | ||||||||||||||| |||| ||| |||||| ||| ||||  ||||||    
T  21754352 tcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttc--acaaaattcattctaaagtcttcccaggttcaatctctttctccaatctt 21754449  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||| |||||| ||| ||| ||| ||||||||||||||||||||||| || |||||    
T  21754450 tcctaatcattattagacatgttcaggcactcaaaaacatctaaggatcaactcaaaagtcaaaaatacgaaatctggatagctctctggtcatgctc 21754547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 433272 - 433485
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| ||||| || |||||||    |||||||||||| |||||| |||||||||||||||||||||   | |    
T  433272 cgtgcgacaaagatcgcaaa-atcctaaacaa-gcattttgcaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagatt 433369  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |  |||   |||||||||||||||||||| |||||| ||||||||| | |||||||| ||||| | || |||||||||| ||||||||| |||||||||     
T  433370 cccaaagt-ttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcagacactcaaaagcatctaagga 433468  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  433469 tcaactcaaaagtcaaa 433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 49261604 - 49261690
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgag 87  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||  || |||||||||||| ||||||| |||||||||||||    
T  49261604 cgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctattcgccatggcgag 49261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 241
Target Start/End: Original strand, 34510100 - 34510283
Alignment:
Q  58 gaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcct 157  Q
    |||||||| |||||| |||||| |||||||||||||| ||  |    |||| ||||||||| |||||||||| |||||| ||||| ||| | ||||||||    
T  34510100 gaggcgagagcctctgctcgccgtggcgagttcaggt-cagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattctttcct 34510198  T
Q  158 tatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
     ||||| |||| |||||||||||||||||||| ||||||||  |||||| ||| ||| |||| ||||||||| |  |||||||||    
T  34510199 aatcattattagacatgttcaggcactcaaaagcatctaagaatcaactcaaaagtcaaaatcacgaaatcttgcaagctctctg 34510283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 241
Target Start/End: Original strand, 43697746 - 43697863
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacga 223  Q
    ||||| ||| || |||| |||| ||||||| || ||||| | || ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  43697746 ttccaggttaaatctcaatctagaatcttttctaatcataaatagacatgttcaggcactcaaaaacatctaaggttcaacttaaaagtcaaaattacga 43697845  T
Q  224 aatctggatagctctctg 241  Q
    ||||  || |||||||||    
T  43697846 aatcatgacagctctctg 43697863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 188
Target Start/End: Complemental strand, 50210018 - 50209885
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | |   ||||  ||||||||||| |||||||| |||||| ||||||||| | ||||    
T  50210018 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattctacattctt 50209920  T
Q  154 tccttatcatcattatacatgttcaggcactcaaa 188  Q
    |||| ||||| |||| |||||||||||||||||||    
T  50209919 tcctaatcattattagacatgttcaggcactcaaa 50209885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 20918870 - 20919079
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    |||||||||||||||| |||||||| || ||||||| ||||     || |||||||||||| |||||| ||||||||||||||||||| |   | ||       
T  20918870 cgacaaagatcgcattcaacctaaa-aaggcattctttaacacacaagctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagattctcc 20918967  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||  |  |||||||  ||||| || |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| ||| ||||| ||||    
T  20918968 aaatttaaattctaag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatgtaaggatcaa 20919066  T
Q  205 cttaaaggtcaaa 217  Q
    || ||||||||||    
T  20919067 ctcaaaggtcaaa 20919079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 21342514 - 21342626
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||||| |||| |||||| || ||| |||||  |||| ||||||| ||| ||| ||||| ||||||||| ||||| ||||||||| ||||||||||||||    
T  21342514 aaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacatattcagacactcaaaatcatctaaggttcaa 21342613  T
Q  205 cttaaaggtcaaa 217  Q
    ||||| |||||||    
T  21342614 cttaagggtcaaa 21342626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 21347379 - 21347491
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||||| |||| |||||| || ||| |||||  |||| ||||||| ||| ||| ||||| ||||||||| ||||| ||||||||| ||||||||||||||    
T  21347379 aaaaatccattttaaaattttcccaggttcattctcaatctaaaaacttgcctaatcattattatacatattcagacactcaaaatcatctaaggttcaa 21347478  T
Q  205 cttaaaggtcaaa 217  Q
    ||||| |||||||    
T  21347479 cttaagggtcaaa 21347491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 22355920 - 22355828
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  22355920 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 22355828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 22357606 - 22357514
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  22357606 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 22357514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 22532635 - 22532747
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||| ||||||||| |||| ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  22532635 aaaagttcattctacaatccttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 22532734  T
Q  205 cttaaaggtcaaa 217  Q
     | ||| ||||||    
T  22532735 atcaaaagtcaaa 22532747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26065204 - 26065295
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||||||||||||   | ||||||||| | ||||||||||||||||  |||||||||||| |||||||||||| ||||||||||||||    
T  26065204 cgtgcgacaaagatcgcaaa-accctaaacaaggtattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 27250475 - 27250371
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaa-attacga 223  Q
    ||||| |||||| | ||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||| |||||||    
T  27250475 ttccaggttcaatcccatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaatattacga 27250376  T
Q  224 aatct 228  Q
    |||||    
T  27250375 aatct 27250371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 16759118 - 16759204
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||| |||| ||||||||||||||||||||||||| |||||| |||||||    
T  16759118 gttcaatctcaatctaaaaacttgcctaatcattattatacgtgtttaggcactcaaaaacatctaaggttcgacttaagggtcaaa 16759204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 217
Target Start/End: Complemental strand, 22354376 - 22354215
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttc 155  Q
    |||||||||| ||||||||||||| ||||||||||||||   | ||  | ||  ||||||||| ||||| |||| |||||| ||||| |||   | ||||    
T  22354376 gcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctatccaggttcaatctcatcctacgttatttc 22354277  T
Q  156 cttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    || ||||| || | ||||||||| |||||||||| ||| |||||||||||| ||| ||||||    
T  22354276 ctaatcattataagacatgttcaagcactcaaaagcatataaggttcaactcaaaagtcaaa 22354215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 20846965 - 20846873
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||| ||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  20846965 ttccaggttcaatctcatcctacattcttacctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaggtcaaa 20846873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 41049723 - 41049619
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    ||||||||||| | |||  || ||| |||||| |||| ||||||| ||| ||| | ||| |||||||||||||||||||||| ||||||||||||||| |    
T  41049723 aaaaattcattttcaaactttcccaggttcaatctcaatctaaaaacttgcctaaccattattatacatgttcaggcactcagaaacatctaaggttcga 41049624  T
Q  205 cttaa 209  Q
    |||||    
T  41049623 cttaa 41049619  T

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Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 21895961 - 21895875
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||||||| ||||| ||||||| |||||||||||||| || ||||||| | ||||||||| |||||||    
T  21895961 gttcaatctcaatctaaaaactttcctaatcattattatacttgttcaggcactcataatcatctaaagatcaacttaagggtcaaa 21895875  T

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Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 38801137 - 38801045
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| | ||| ||| | |||||||| ||||| |||| ||||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  38801137 ttccaggttcaatcacatcctacattctttcctaatcattattagacatgttcaggcactcaaagacatctaaagttcaactcaaaagtcaaa 38801045  T

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Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 21861223 - 21861137
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||| |||||||||||||| || ||||||| | ||||||||| |||||||    
T  21861223 gttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcagaatcatctaaagatcaacttaagggtcaaa 21861137  T

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Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 26065386 - 26065464
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||||||||||||||||  | ||||||| |||||||||||    
T  26065386 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaggatcatctaaagttcaacttaa 26065464  T

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Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 35260784 - 35260706
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| |||||||||||||||||||||| || ||||||| |||| ||||||    
T  35260784 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcatctaaagttcgacttaa 35260706  T

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Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 21714983 - 21715036
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  21714983 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 21715036  T

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Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 21301245 - 21301181
Alignment:
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  21301245 ttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 21301181  T

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Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 16758946 - 16759005
Alignment:
Q  33 agcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    |||||||||||||| ||||  |||||||| ||||||||||||| || |||||||||||||    
T  16758946 agcattctgtaactaggcaactcgcgaggtgagggcctctacttgctatggcgagttcag 16759005  T

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Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 16381640 - 16381698
Alignment:
Q  139 tcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||||||| ||||||| |||||  |||||||||| ||||||||||||| |||||||    
T  16381640 tcattctaaaaactttcctaatcattcttatacatgtccaggcactcaaaaccatctaa 16381698  T

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Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 22468382 - 22468340
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  22468382 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 22468340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 27652874 - 27652808
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||| ||| |||||||||||||||||||||||    
T  27652874 gttcaatctcaatctaaaaacttgcctaatcattattatgcatattcaggcactcaaaaacatctaa 27652808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 48521036 - 48521102
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| |||||| ||||||||||||||||    
T  48521036 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggtactcaaaaacatctaa 48521102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 16367946 - 16367873
Alignment:
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||||  |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| |||||||    
T  16367946 tttccaggttcattctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatctaa 16367873  T

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Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 21861372 - 21861335
Alignment:
Q  55 cgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    |||||||||||||||||||||||| |||||||||||||    
T  21861372 cgcgaggcgagggcctctactcgctatggcgagttcag 21861335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35260936 - 35260852
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcga 86  Q
    ||||||||||||||||||   | ||||| ||| | ||| |||||||||| |  ||||||||||||||||||||||||| |||||||    
T  35260936 cgtgcgacaaagatcgcaaa-atcctaagcaaggtattttgtaactgggaaactcgcgaggcgagggcctctactcgctatggcga 35260852  T

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Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 38801197 - 38801157
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  38801197 tcgcgaggcgagagcctctactcgccgtggcgagttcaggt 38801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 22831061 - 22831022
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  22831061 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 22831022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 42864894 - 42864855
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  42864894 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 42864855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 8761316 - 8761266
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggt-caaattacgaaatc 227  Q
    |||||||||||| |||||||||||||||| ||| || ||||||||||||||    
T  8761316 aggcactcaaaagcatctaaggttcaactcaaaagtccaaattacgaaatc 8761266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 16093552 - 16093479
Alignment:
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||||| |||| ||||||| ||| ||  ||||| ||||||||| | ||||||||||||| |||||||    
T  16093552 tttccaggttcaatctcaatctaaaaacttgccaaatcattattatacatatccaggcactcaaaaccatctaa 16093479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 21787738 - 21787697
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| |||| || |||||||||||||||||||||||||||||    
T  21787738 attaaacatctttaggcactcaaaaacatctaaggttcaact 21787697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 21162081 - 21162121
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| ||||||||||||||| |||||    
T  21162081 tcgcgaggcgagagcctctgctcgccatggcgagtacaggt 21162121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 21533537 - 21533481
Alignment:
Q  141 attctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||||| ||| ||| |||||  |||||||| ||||||||||||||| |||||||    
T  21533537 attctaaaaacttgcctaatcattcttatacatattcaggcactcaaaatcatctaa 21533481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 41049841 - 41049809
Alignment:
Q  61 gcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||||||||| ||||||||||||||    
T  41049841 gcgagggcctctactcgctatggcgagttcagg 41049809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 52940496 - 52940464
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||||||||||||||||||||| |||||||    
T  52940496 attatacatgttcaggcactcaaaatcatctaa 52940464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 44014437 - 44014686
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| ||  || |||||||||||| |||||||||| |||||||||||||||||||||||    
T  44014437 cgtgcgacaatgatcgcatttaacctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaact 44014536  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
     | |||| ||||||||||||||||||||| |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||      
T  44014537 aacaaaa-attcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagta 44014635  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  44014636 tcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctc 44014686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 47832076 - 47832311
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||       
T  47832076 cgacaaagatcacatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaactc--t 47832173  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
     ||||||| |||| |||   |||||  ||||| || | |||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  47832174 caaaattcgttcttaaactattccagattcaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 47832273  T
Q  205 cttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |||||||||| |||||||||||||  |||| |||||||    
T  47832274 cttaaaggtcaaaattacgaaatcatgatacctctctg 47832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 16219572 - 16219359
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  16219572 gtgcgacaaagatcgcatttaacctaa-caaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgagttcacgtgtaactc 16219474  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
      ||||| |||||||| |||   ||||| |||||| |||| ||||||||||||||| ||||| |||||||| ||| || |||||||||||||||||||||    
T  16219473 ccaaaaa-ttcattcttaaactattccaggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaaaacatctaaggtt 16219375  T
Q  202 caacttaaaggtcaaa 217  Q
    ||||||||||||||||    
T  16219374 caacttaaaggtcaaa 16219359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 9389553 - 9389304
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||| |||||||||||| |||||||||||||| ||||||||||||||   || |||||||||||| |||||||||||||||||||||||||| || ||||    
T  9389553 cgtgtgacaaagatcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctctactcgccatggcgagttcagctgtaact 9389454  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  | |||||| |||| |||   ||||| |||||| |||| |||| |||||||||| |||||||||||||| || ||| |||||||||||||| |||||    
T  9389453 ca-cataaattcgttcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcattatacaagtccagacactcaaaaacatccaaggt 9389355  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||||||| ||| ||| ||| ||||||||||||||||||| || |||||    
T  9389354 tcaacttaaaagtcaaaagtacaaaatctggatagctctctggtcatgctc 9389304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 250
Target Start/End: Complemental strand, 810984 - 810738
Alignment:
Q  4 gcgacaaagatcgcatttaacctaaacaaagcattctgtaac-tgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactca 102  Q
    ||||||||||||||||||||| ||||||| ||||| |||||| |  | | | ||||||||||| |||||||||||||||||||||||||||| ||  |||    
T  810984 gcgacaaagatcgcatttaacttaaacaaggcattttgtaacataagtact-cgcgaggcgagagcctctactcgccatggcgagttcaggtacagttca 810886  T
Q  103 taaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
     ||||| ||||||||||| |||||||| |||||| || |||||  |||||||||| ||||| |||| | |||||||||||||||||||||||||||| ||    
T  810885 caaaaa-ttcattctaaattctttccaggttcaatcttattctccaatctttcctaatcattattagatatgttcaggcactcaaaaacatctaaggatc 810787  T
Q  203 aacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||| ||| ||| |||||||||||||||||| |||||||| || |||||    
T  810786 aactcaaaagtcaaaattacgaaatctggatggctctctggtcatgctc 810738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 22073180 - 22073386
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  22073180 cgtgcgacaaggatcgcatttaacctaa-caaagcattctgtaactgggtaactcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaact 22073278  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   ||| | |||||| ||||||||| ||||||| || ||||| |||| |||||||||||||||||||||| ||||||||    
T  22073279 c-ccaaaaatccattcttaaactattctaggttcaatctcattctagaatcttttctaatcattattacacatgttcaggcactcaaaaacctctaaggt 22073377  T
Q  201 tcaacttaa 209  Q
     ||||||||    
T  22073378 ccaacttaa 22073386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 68010 - 68258
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||  || |||||||||||| |||||||||||||||||||||||||  || |||||    
T  68010 gtgcgacaaggatcgcatttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcatctgtaactc 68109  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
       | || ||  |||| ||||  ||||| |||||| |||| |||  |||||||||| ||||| |||| |||| ||||||||||| ||||||| ||||| |    
T  68110 -ccacaagtttgttcttaaattattccaggttcaatctcaatctccaatctttcctaatcattattagacatattcaggcactcgaaaacatttaaggat 68208  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||| ||||||||||||||||||| ||||||| || |||||    
T  68209 caactcaaaagtcaaaattacgaaatctggatatctctctggtcatgctc 68258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 227
Target Start/End: Original strand, 16324272 - 16324495
Alignment:
Q  3 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactca 102  Q
    |||||||| |||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||   |  |||||     
T  16324272 tgcgacaaggatcacatttaacctaa-caaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcgagttccaatctaactc- 16324369  T
Q  103 taaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
    | |||||||| |||| |||   ||||| |||||| ||||  ||  |||||||||| ||||| |||| ||||||||| ||||||||||||||  |||||||    
T  16324370 tcaaaaattcgttcttaaactattccaggttcaatctcaaactccaatctttcctaatcattattagacatgttcaagcactcaaaaacattcaaggttc 16324469  T
Q  203 aacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||| |||||||||||||    
T  16324470 aacttaaaggtcaaaattacgaaatc 16324495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 12756572 - 12756336
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| || || ||||| ||||||  |||||||||||| ||||||||||||||||| |||||||||| || ||    
T  12756572 cgtgcgacaaagatcgcaaa-atcctaaacaaggcttt-tgtaattgggcaactcgcgaggcgagagcctctactcgccatggtgagttcaggt-cagct 12756476  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
       ||||| |||||||| ||||  | ||| |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||     
T  12756475 tccaaaaagttcattcttaaataat-ccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagga 12756377  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctct 240  Q
    |||||| ||| ||| |||||||||||| |||||||||||||    
T  12756376 tcaactcaaaagtcaaaattacgaaatttggatagctctct 12756336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 16056592 - 16056798
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||||||| |  |||||||||||| |||||||||||| |||||||||||||||| || |    
T  16056592 cgtgctacaaagatcgcatttaacctaa-caaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaatt 16056690  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   ||||| |||||| |||| |||||||||||||||  |||| |||||||||||||||| || ||||| || |||| |     
T  16056691 c-ccaaaaatccattcttaaactattccaggttcaatctcaatctaaaatctttcctattcattattatacatgttcaggtacacaaaatcacctaaagc 16056789  T
Q  201 tcaacttaa 209  Q
    |||||||||    
T  16056790 tcaacttaa 16056798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 17061816 - 17061569
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| ||||||||||| | ||    |||||||||||| ||||||||||||||| ||||||||||||   | |    
T  17061816 cgtgcgacaaagatcgcaaa-atcctaaacaa-gcattctgtaaataggtcactcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagatt 17061719  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    | | |||  || |||||||||||| |||| |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||     
T  17061718 c-tcaaagttttattctaaaatctatccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagga 17061620  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| |||| ||||||| |||||||||||||| || |||||    
T  17061619 tcaactcaaaagtcaaaatcacgaaatttggatagctctctggtcatgctc 17061569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 18005912 - 18006153
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||| | ||||||||| ||||| ||||||| | || ||||||||||||||||||||| ||||||||||||||||||||  |||||    
T  18005912 gtgcgacaaagatcgcatt-atcctaaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctagtcgccatggcgagttcaggtataactc 18006010  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
      | ||  ||| |||| |||   ||  | |||||| ||||      |||||||| | ||||| |||| |||||||||||||||||||||||||||||| |    
T  18006011 ccacaag-ttcgttcttaaactattttaggttcaatctca------aatctttcataatcattattagacatgttcaggcactcaaaaacatctaaggat 18006103  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  18006104 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctc 18006153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 12255618 - 12255454
Alignment:
Q  32 aagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaag 131  Q
    |||||||||||||||||| |  |||||||||||| |||||||||||| |||||||||||||||| |||||   ||||||||||||| |||   ||||| |    
T  12255618 aagcattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactc-ccaaaaattcattcttaaactattccagg 12255520  T
Q  132 ttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||| |||| |||| |||||||||| ||||| |||||||||||||| |||||||||| |||||||    
T  12255519 ttcaatctcaatctagaatctttcctaatcattattatacatgttcaagcactcaaaatcatctaa 12255454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 15143842 - 15143691
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| ||||||||||||||| |||||   | ||| ||||  |||||||||||||||||||| |||||| ||||||||||||||||    
T  15143842 tcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaag-ttcattctaaaatctttccaggttcaatctcattctaaaatctt 15143744  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| ||||| |||| |||||||||||||||||||  |||||||||| |||||    
T  15143743 tcctaatcattattagacatgttcaggcactcaaaggcatctaaggtacaact 15143691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 2279945 - 2279781
Alignment:
Q  32 aagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaag 131  Q
    ||||||||| ||||| ||||  ||||||||||||||||||||||||| |||||||||||||||| ||| |   |||||| |||||| |||   || || |    
T  2279945 aagcattctataactaggcaactcgcgaggcgagggcctctactcgctatggcgagttcaggtgtaacac-ccaaaaatccattcttaaactattacagg 2279847  T
Q  132 ttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||| |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||    
T  2279846 ttcaatctcaatctaaaatctttcctaatcattattatgcatgttcaggcactcaaaatcatctaa 2279781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 9751407 - 9751193
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||      | |||||||||||| |||||| ||| ||||||||||||||| |  || |    
T  9751407 cgtgcgacaaagatcgcatttaaactaaacaaggcattctgtaacacaagcgctcgcgaggcgagagcctctgctcaccatggcgagttcag-tcaaatt 9751309  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  ||||||||||  |||||||| |||||||||||| ||| | |||||||| ||||  |||| |||||||||||||||||||  ||||||||||    
T  9751308 ctccaaagtttcattctaag-tctttccaggttcaacctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggt 9751210  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  9751209 tcaactcaaaagtcaaa 9751193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 38227796 - 38227958
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  ||||  ||||||||||| |||||||| |||||| ||||||||| | ||||    
T  38227796 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaa-tctttccaggttcaatctcattctacattctt 38227894  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  38227895 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 38227958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 28505153 - 28504944
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    |||||||||||||||| |||||||| || ||||||||||||      | |||||||||||| |||||| ||||||||||||||||| |||   | ||       
T  28505153 cgacaaagatcgcattcaacctaaa-aaggcattctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctct 28505056  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||  ||||||||||  ||||| || |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  28505055 aaattttcattctaag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 28504957  T
Q  205 cttaaaggtcaaa 217  Q
    || ||| ||||||    
T  28504956 ctcaaaagtcaaa 28504944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 9509504 - 9509667
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||    
T  9509504 tcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctt 9509603  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  9509604 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 9509667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 21064964 - 21064816
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcc 156  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||| | | |||||| |||||| | |   |||||||||||| ||||||||||||| |||||    
T  21064964 cgaggcgagagcctctactcgccatggcgagttaaggtaaaacac-tcaaaaatccattctgacactattccaagttcaatctcattctaaaatatttcc 21064866  T
Q  157 ttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    | ||||| ||| ||||||||||||| |||| |||||||||||||| ||||    
T  21064865 taatcattattgtacatgttcaggccctcataaacatctaaggttaaact 21064816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 44116821 - 44117016
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||||||||||||||||||   | ||  |||   ||||||||||| |||||||  |||||| ||||||||| | ||||    
T  44116821 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagt-ttcattctaaa-tctttccgggttcaatctcattctacattctt 44116918  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||| ||||| |||| ||||||||||| |||||||  ||| ||||| |||||| ||  ||| |||||||||||| |||||||||||||| || |||||    
T  44116919 tcctaatcattattagacatgttcagggactcaaaggcatataaggatcaactcaagagtcaaaattacgaaatttggatagctctctggtcatgctc 44117016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 3564119 - 3563982
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||| ||||||||| |||||||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||  ||||    
T  3564119 aaaagttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagaatcaa 3564020  T
Q  205 cttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    || ||| ||| |||| ||||||||| |  |||||||||    
T  3564019 ctcaaaagtcaaaataacgaaatcttgcaagctctctg 3563982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 27847579 - 27847487
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||||| |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  27847579 ttccaggttcaatctcatcctaaattctttcctaatcataattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 27847487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 39267503 - 39267289
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||| |||||||||||||||| |||||||||||       | || ||||||||| |||||| ||||||||||||||||||| |   | |    
T  39267503 cgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcccgaggcgagagcctctgctcgccatggcgagttcag-tcagatt 39267405  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  ||||||||||  |||||||| |||||| ||||| ||| | |||||||| ||||  |||| |||||||||||||||||||  ||| ||||||    
T  39267404 ctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatataaggt 39267306  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  39267305 tcaactcaaaagtcaaa 39267289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 40443763 - 40443855
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||||| |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  40443763 ttccaggttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 40443855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 15754623 - 15754530
Alignment:
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||||| |||||||||   |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  15754623 tttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 15754530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 16385993 - 16385901
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  16385993 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 16385901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 18302448 - 18302668
Alignment:
Q  7 acaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaa 106  Q
    |||| ||||||||||||||||||||  ||||||||||||      | |||||||||||| |||||| |||||||||||||||||||   ||  | ||  |    
T  18302448 acaaggatcgcatttaacctaaacatggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttcagt--cagattatcca 18302545  T
Q  107 aaatt-cattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaac 205  Q
    || || ||||||||  |||||||| |||||| ||||| ||| | |||||||| || |  |||| ||||||||||||||||||   |||||||||||||||    
T  18302546 aagtttcattctaag-tctttccaggttcaatctcatcctacattctttcctaataaatattagacatgttcaggcactcaagggcatctaaggttcaac 18302644  T
Q  206 ttaaaggtc-aaattacgaaatct 228  Q
    | ||| ||| ||||||||||||||    
T  18302645 tcaaaagtcaaaattacgaaatct 18302668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 11995768 - 11995701
Alignment:
Q  150 tctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  11995768 tctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 11995701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 12699203 - 12699310
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||| | |||||||||| ||||||  |||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||    
T  12699203 ttcattcaacaatctttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaa 12699302  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  12699303 aagtcaaa 12699310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 34201166 - 34201261
Alignment:
Q  122 tctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| || |||||| ||||||||||| |||||| | ||||| |||| |||||||||| ||||||||| |||||||||||||||| ||| ||||||    
T  34201166 tctttacaggttcaatctcattctaaattctttcttgatcattattagacatgttcagacactcaaaagcatctaaggttcaactcaaaagtcaaa 34201261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 2832162 - 2831949
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| |||| ||||||||||||||||  ||||||||||       | |||||||||||| |||||| |||||||||| ||||||||   ||  |    
T  2832162 cgtgcgacaaggatcacatttaacctaaacaagacattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggtgagttcagt--cagat 2832065  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
      |  ||| ||||||||||  |||||| | |||||| ||||| ||| | |||||||| ||||  |||| |||||||||||||||||||  ||||||||||    
T  2832064 tctccaaagttcattctaag-tctttctaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggt 2831966  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  2831965 tcaactcaaaagtcaaa 2831949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 2529699 - 2529628
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  2529699 ctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatctaaggttcaacttaa 2529628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 9177318 - 9177252
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||| |||| ||||||| ||| ||| |||||  ||||||||||||||||||||||||||||||||    
T  9177318 gttcaatctcaatctaaaaacttacctaatcattcttatacatgttcaggcactcaaaaacatctaa 9177252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14045013 - 14045102
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    ||||||||||||||||||   | ||||||||| | |||||| |||||||||| ||||||||||||   |||||||||| ||||||||||||    
T  14045013 cgtgcgacaaagatcgcaaa-accctaaacaaggtattctgaaactgggcagctcgcgaggcgagccactctactcgctatggcgagttca 14045102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14355043 - 14355132
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    ||||||||||||||||||   | ||||||||| | |||||| |||||||||| ||||||||||||   |||||||||| ||||||||||||    
T  14355043 cgtgcgacaaagatcgcaaa-accctaaacaaggtattctgaaactgggcagctcgcgaggcgagccactctactcgctatggcgagttca 14355132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 17017120 - 17017042
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| ||| ||||| ||||||||||||||| ||||||| |||||||||||    
T  17017120 gttcaatctcaatctaaaaacttgcctaatcattattgtacatattcaggcactcaaaatcatctaaagttcaacttaa 17017042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 24054894 - 24054944
Alignment:
Q  167 tatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| ||||||    
T  24054894 tatacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 24054944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 14045216 - 14045281
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatcta 196  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||||||||||    
T  14045216 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaacatcta 14045281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 14355246 - 14355311
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatcta 196  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||||||||||    
T  14355246 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaacatcta 14355311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 18154522 - 18154469
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  18154522 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 18154469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15008354 - 15008263
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||||||||||||   | ||||||||| | |||||  |||||||||  |||||||||||| |||||||||||| |||| |||||||||    
T  15008354 cgtgcgacaaagatcgcaaa-accctaaacaaggtattctacaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcagg 15008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 11995882 - 11995796
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    ||||||||||||||||||||||||| || ||||||||||||      | |||||||||||| |||||| || ||||||||||||||||    
T  11995882 cgacaaagatcgcatttaacctaaa-aaggcattctgtaacacaaatgctcgcgaggcgagagcctctgcttgccatggcgagttcag 11995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15754745 - 15754702
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaa 44  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  15754745 cgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaa 15754702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 9177469 - 9177431
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  9177469 tcgcgaggcgagggcctctactcgctatggcgagttcag 9177431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 10508768 - 10508726
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  10508768 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 10508726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 11768596 - 11768526
Alignment:
Q  127 ccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||||||  ||| ||||||| ||| ||| |||||  |||||||||||||||||||||||| |||||||    
T  11768596 ccaagttcaatttcaatctaaaaacttgcctaatcattcttatacatgttcaggcactcaaaatcatctaa 11768526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 19649170 - 19649128
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  19649170 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 19649128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 1867715 - 1867650
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatcta 196  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| |||||||||| |||||||||||    
T  1867715 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactaaaaaacatcta 1867650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 14036666 - 14036731
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatcta 196  Q
    |||||| |||| ||||||| ||| ||| ||||| ||| ||||| ||||||||||||||||||||||    
T  14036666 gttcaatctcaatctaaaaacttgcctaatcattattttacatattcaggcactcaaaaacatcta 14036731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 14346696 - 14346761
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatcta 196  Q
    |||||| |||| ||||||| ||| ||| ||||| ||| ||||| ||||||||||||||||||||||    
T  14346696 gttcaatctcaatctaaaaacttgcctaatcattattttacatattcaggcactcaaaaacatcta 14346761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 209
Target Start/End: Complemental strand, 15008200 - 15008095
Alignment:
Q  104 aaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttca 203  Q
    ||||||| |||| |||||  || ||| |||||| |||| |||||||  ||  || ||||| |||||||||||||||||||||| || ||||||| ||||     
T  15008200 aaaaaatccattttaaaactttcccaggttcaatctcaatctaaaaaattgtctaatcattattatacatgttcaggcactcagaatcatctaaagttcg 15008101  T
Q  204 acttaa 209  Q
    ||||||    
T  15008100 acttaa 15008095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 35366610 - 35366691
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||| ||||||||||||  || ||| |||||  |  ||||||||||||| |||||||||||| |||||| ||||    
T  35366610 ttccaagttcaatctcattctaaaactttgcctaatcattgtagtacatgttcaggccctcaaaaacatccaaggttaaact 35366691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2529910 - 2529866
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaac 45  Q
    ||||||||||||||||||||||||||||  || ||||||||||||    
T  2529910 cgtgcgacaaagatcgcatttaacctaattaaggcattctgtaac 2529866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14036463 - 14036554
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||||||||||||   | ||||||||| | |||||| || ||| ||| ||||||||||||   |||||||||| ||||||||||||||    
T  14036463 cgtgcgacaaagatcgcaaa-accctaaacaaggtattctgaaattggccagctcgcgaggcgagccactctactcgctatggcgagttcagg 14036554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14346493 - 14346584
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||||||||||||   | ||||||||| | |||||| || ||| ||| ||||||||||||   |||||||||| ||||||||||||||    
T  14346493 cgtgcgacaaagatcgcaaa-accctaaacaaggtattctgaaattggccagctcgcgaggcgagccactctactcgctatggcgagttcagg 14346584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 26212311 - 26212351
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  26212311 tcgcgaggcgagagcctctactcgccgtggcgagttcaggt 26212351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 26212411 - 26212463
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| |||||||||||||||||||  |||||||||||||||| ||| ||||||    
T  26212411 attagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaa 26212463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 1867875 - 1867808
Alignment:
Q  24 cctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    ||||||||| | |||||| |||||||||| |||| |||||||   |||||||||| ||||||||||||    
T  1867875 cctaaacaaggtattctgaaactgggcagctcgcaaggcgagccactctactcgctatggcgagttca 1867808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 9703703 - 9703742
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  9703703 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 9703742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 11880689 - 11880728
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  11880689 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 11880728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 12901797 - 12901852
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactca 186  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||||||||||||||||    
T  12901797 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 12901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 2760551 - 2760613
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaat 226  Q
    |||| |||| || |||||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  2760551 attaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 2760613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 3272211 - 3272273
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaat 226  Q
    |||| |||| || |||||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  3272211 attaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 3272273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 42462257 - 42462306
Alignment:
Q  44 actgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||| |||| |||||||||||||  |||||||||| ||||||||||||||    
T  42462257 actgtgcagctcgcgaggcgaggcactctactcgctatggcgagttcagg 42462306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 15113260 - 15113296
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttc 90  Q
    |||||||||||| |||||||||||| |||||||||||    
T  15113260 tcgcgaggcgagagcctctactcgctatggcgagttc 15113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 40443704 - 40443744
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  40443704 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 40443744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15471188 - 15471413
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  15471188 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcacgaggcgagggcctctactcgccatggcgagttcaggtgtaact 15471287  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |    ||||||| |||| |||   ||||| |||||| || | |||  |||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  15471288 c--tcaaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcattatacatgttcagggactcaaaaacatctaaggt 15471385  T
Q  201 tcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||| ||||||| |||||||||||||    
T  15471386 tcaactcaaaggtcaaaattacgaaatc 15471413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 14234758 - 14234968
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    ||||||||||| |||||||||||||||| |||||||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||||||       
T  14234758 cgacaaagatcacatttaacctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc-cc 14234856  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    ||||||||||||| || | ||| |  |||||| |||| |||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  14234857 aaaaattcattcttaactattt-cgggttcaatctcaatctataatctttcctaatcatcattatacatgttcaggcactcaaaaaaatctaaggttcaa 14234955  T
Q  205 cttaaaggtcaaa 217  Q
    |||||||||||||    
T  14234956 cttaaaggtcaaa 14234968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 16097593 - 16097830
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||| |||||||  |||| ||||||| |  || |||||||||||| |||||||||| ||||||||||||||||| ||| |    
T  16097593 cgtgcgacaaagatcgcatttaacataaacaagacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtccaatt 16097692  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || |||| |||||||||||||||||| || |||||| ||||||||  |||||||||| || || |||| |||||||||| ||||||||||||| |||||     
T  16097693 cacaaaa-attcattctaaaatcttttcaggttcaatctcattctccaatctttcctaataattattagacatgttcagacactcaaaaacatttaagga 16097791  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctct 238  Q
    |||||| ||| ||| ||||||||||||||||||||||||    
T  16097792 tcaactcaaaagtcaaaattacgaaatctggatagctct 16097830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1465267 - 1465052
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||  | |||||||||||||| |||||||||||||||  || |||||||||||| |||||||||||||||||| |||||||||||||||    
T  1465267 cgtgcgacaaagattacttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcaagttcaggtgcaact 1465168  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  | |||||| |||| ||||  ||||| |||||| |||| |||| |||||||| | |||||||| ||||| |||||||||||||||||||||||||||    
T  1465167 ca-cacaaattcgttcttaaattattccaggttcaatctcaatctacaatctttcataatcatcatcatacaagttcaggcactcaaaaacatctaaggt 1465069  T
Q  201 tcaacttaaaggtcaaa 217  Q
    || ||||||||||||||    
T  1465068 tcgacttaaaggtcaaa 1465052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 12934168 - 12933919
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| | | ||||||||        |||||||||||| | |||| ||||||||||||||||||||| ||  |    
T  12934168 cgtgcgacaaagatcgcatttaacctaaacaaggaagtctgtaacacaagtactcgcgaggcgagagtctctgctcgccatggcgagttcaggttcagtt 12934069  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||  |||||||||||||||||||| |||||| ||||||||  |||||||||| ||||| |||| ||||||||||||||||||||||||||||||     
T  12934068 cacaaaat-ttcattctaaaatctttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagga 12933970  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||| ||||||||||||||||||||||| || |||||    
T  12933969 tcaactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctc 12933919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 9513173 - 9513422
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||        || ||||||||| |||||| |||||||||| ||||||||||  |  ||    
T  9513173 gtgcgacaaagatcgcatttaacataagcaaggcattctgtaacacaagtaatctcgaggcgagagcctctgctcgccatggtgagttcaggtttagttc 9513272  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    | ||||| ||||||||||||||||| || |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||| ||||||||| |    
T  9513273 acaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggat 9513372  T
Q  202 caacttaaaggtcaa-attacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||||| | ||||||||||||||||||||||| || |||||    
T  9513373 caactcaaaagtcaatagtacgaaatctggatagctctctggtcatgctc 9513422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 9521148 - 9521397
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||        || ||||||||| |||||| |||||||||| ||||||||||  |  ||    
T  9521148 gtgcgacaaagatcgcatttaacataagcaaggcattctgtaacacaagtaatctcgaggcgagagcctctgctcgccatggtgagttcaggtttagttc 9521247  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    | ||||| ||||||||||||||||| || |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||| ||||||||| |    
T  9521248 acaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggat 9521347  T
Q  202 caacttaaaggtcaa-attacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||||| | ||||||||||||||||||||||| || |||||    
T  9521348 caactcaaaagtcaatagtacgaaatctggatagctctctggtcatgctc 9521397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 49667941 - 49667693
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||        |||||||||||| |||||| ||||||||||||||||||||| ||  |    
T  49667941 cgtgcgacaaagatcgtatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagtt 49667842  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || || |  |||||||||||||||||||| |||||| ||||||||  |||||||||| ||||| |||| |||||||||||| ||| |||||||||||||     
T  49667841 cacaatat-ttcattctaaaatctttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcgctc-aaaacatctaagga 49667744  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||| ||||||||||||||||||||||| || |||||    
T  49667743 tcaactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctc 49667693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 12171961 - 12171725
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    |||||||||  |||||||||||||||||||| ||||||||||||| |  || |||||||||||| |||||||||||||||||| ||||||||| ||  ||    
T  12171961 gtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagatcgcgaggcgagagcctctactcgccatggccagttcaggttcagttc 12171862  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    |  |||||||||||||||| ||| |||| ||||             |||||||||| ||||| |||| |||||||||||||||||||||||||||||| |    
T  12171861 a-caaaaattcattctaaagtctctccaggttc-------------aatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggat 12171776  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctca 251  Q
    ||||| ||| ||| |||||||||||| |||||||||||||| || ||||||    
T  12171775 caactaaaaagtcaaaattacgaaatttggatagctctctggtcatgctca 12171725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 56 - 250
Target Start/End: Complemental strand, 49389446 - 49389253
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttc 155  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||  ||  | ||||||||||||||| ||| |||| |||||| ||||||||  ||||||||    
T  49389446 gcgaggcgagaacctctgctcgccatggcgagttcaggttcagttc--acaaaattcattctaaagtctctccaggttcaatctcattctccaatctttc 49389349  T
Q  156 cttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    || ||||| |||| |||||||||||||||||||||||||||||| |||||| ||| ||| ||||||||||||||| ||||||||||| || |||||    
T  49389348 ctaatcattattagacatgttcaggcactcaaaaacatctaaggatcaactcaaaagtcaaaattacgaaatctgaatagctctctggtcatgctc 49389253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 16104044 - 16104292
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagt--tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaa 98  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||    ||||  || ||||||||| |||||| ||||||| | ||||||| | | |||    
T  16104044 cgtgcgacaaagagcgcatttaacctaaacaaggcagtctgtaacac--cagtactcacgaggcgagagcctctgctcgccacgacgagttcggattcaa 16104141  T
Q  99 ctcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaag 198  Q
     ||| ||||  |||| |||||| |||| ||| |||||||||||||||  |||||||||| ||||| |||| ||||||||||||||||| |||||||||||    
T  16104142 ttcacaaaa--ttcaatctaaagtcttcccaggttcaacctcattctccaatctttcctaatcattattagacatgttcaggcactcagaaacatctaag 16104239  T
Q  199 gttcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    | |||||| ||| ||| |||||||||||| |||||||||||||| || |||||    
T  16104240 gatcaactcaaaagtcaaaattacgaaatttggatagctctctggtcatgctc 16104292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 32307932 - 32308167
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||        |||||||||||| |||||| ||||||||||||||||||||| ||  |    
T  32307932 cgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagtt 32308031  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |  ||||  ||||||||||| |||| | | |||||| ||||||||  |||||||||| ||||| |||| | |||||||||||||||||| |||||||||     
T  32308032 cccaaaa--ttcattctaaagtcttcctaggttcaatctcattctccaatctttcctaatcattattagatatgttcaggcactcaaaagcatctaagga 32308129  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctc 237  Q
    |||||| ||| ||| ||||||||||||||| |||||||    
T  32308130 tcaactcaaaagtcaaaattacgaaatctgaatagctc 32308167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 324503 - 324705
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    |||||||| || |||||||||||| ||| |  |||||||||| || |  |||||||||||| |||||||||||| ||||||||||||||||||||||  |    
T  324503 cgacaaaggtcacatttaacctaa-caaggtgttctgtaacttggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgcaactccca 324601  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||| |||||||| |||   |||  ||||||| ||||||||| |||||||||| ||||| ||||||||| ||||||||||||||| ||||||| ||||||    
T  324602 aaaa-ttcattcttaaactattctcagttcaatctcattctacaatctttcctaatcattattatacatattcaggcactcaaaatcatctaaagttcaa 324700  T
Q  205 cttaa 209  Q
    |||||    
T  324701 cttaa 324705  T

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Target: chr3; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 1644540 - 1644292
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| ||||||||||||| ||||||| ||| | ||||||        |||||||||||| |||||| ||||||||||||||||||||| ||  |    
T  1644540 cgtgcgacaaggatcgcatttaacttaaacaaggcagtttgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagtt 1644441  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |  | ||||||||||||||| ||||  || |||||| ||||||||  |||||||||| ||||| || | ||||||||||||||||||||||||| ||||     
T  1644440 c--acaaaattcattctaaagtcttctcaggttcaatctcattctctaatctttcctaatcattatcagacatgttcaggcactcaaaaacatccaagga 1644343  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||||||||||||||| ||||||||||| || |||||    
T  1644342 tcaactcaaaagtcaaaattacgaaatctgaatagctctctggtcatgctc 1644292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 17248113 - 17247929
Alignment:
Q  32 aagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaag 131  Q
    ||||||||||||||||||    |||||||||||| |||||| |||||||||||||||||||||   | ||  |||   |||||||||||||||||||| |    
T  17248113 aagcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagt-ttcattctaaaatctttccagg 17248015  T
Q  132 ttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  17248014 ttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggatcaactcaaaagtcaaa 17247929  T

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Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 53070554 - 53070342
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| || |||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||| || ||    
T  53070554 cgtgcgacaaagatcgcaaa-atcctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagct 53070458  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
       ||||| |||||||| || |  | ||| |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||     
T  53070457 tccaaaaagttcattcttaattaat-ccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaagga 53070359  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  53070358 tcaactcaaaagtcaaa 53070342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 2051053 - 2050844
Alignment:
Q  3 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactca 102  Q
    ||||||||||||||||   | ||||||||| ||||| ||||||||||||  || ||||||||| |||||||||||| |||| ||||||||||| |||||     
T  2051053 tgcgacaaagatcgcaaa-atcctaaacaa-gcattttgtaactgggcaactcacgaggcgagagcctctactcgctatggagagttcaggtgtaactcc 2050956  T
Q  103 taaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
     ||||| | |||||| |||   |||   |||||| |||| |||| |||||||||| ||||| |||| ||||||| |||||||||||||||||||||||||    
T  2050955 caaaaa-tccattcttaaactattcg--gttcaatctcaatctagaatctttcctaatcattattacacatgttgaggcactcaaaaacatctaaggttc 2050859  T
Q  203 aacttaaaggtcaaa 217  Q
    ||||||| |||||||    
T  2050858 aacttaagggtcaaa 2050844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 42386698 - 42386889
Alignment:
Q  24 cctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatc 123  Q
    ||||||||| || |||||||| ||||||  |||||||| ||| ||||||||||||||||||||||||||||  |||||  ||||  |||||||| || |     
T  42386698 cctaaacaaggc-ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtataactcccaaaagtttcattcttaacta 42386796  T
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| | |||||| | || |||||| |||| ||| ||||| ||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  42386797 tttc-aggttcaatcacagtctaaagtcttgcctaatcattattatgcatgttcatgcactcataaacaactaaggttcaacttaaaggtcaaa 42386889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 52523583 - 52523390
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| ||||||||||||||||||  |||  |||||||||||||||||||| |||||||||||||||| ||||    
T  52523583 cgtgcgacaaagatcgcaaa-atcctaaacaa-gcattctgtaactgggcaactcgtcaggcgagggcctctactcgctatggcgagttcaggtgtaact 52523486  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |   |||||| |||||| |||   ||||| ||||||  |||  ||| |||||||||| || || |||| |||||||||||||||||||| |||||||    
T  52523485 c-ccaaaaatccattcttaaactgttccaggttcaatatcaaactagaatctttcctaataattattacacatgttcaggcactcaaaatcatctaa 52523390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 11424568 - 11424406
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | |   ||||  ||||||||||| |||||||| |||||| ||||||||| | | ||    
T  11424568 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaa-tctttccaggttcaatctcattctacattatt 11424470  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  11424469 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 11424406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 25476190 - 25476028
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||| | ||||||||||||||   | ||  ||||  |||||||||||||||||||| |||| | ||||||||| | ||||    
T  25476190 tcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagattcc-aaaagtttcattctaaaatctttccaggttcgatctcattctacattctt 25476092  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    || | ||||| |||| ||||||||||| |||||||||||||||||| |||||| ||| ||||||    
T  25476091 tcataatcattattagacatgttcaggtactcaaaaacatctaaggatcaactcaaaagtcaaa 25476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13210185 - 13209971
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaa-c 99  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||      | |||||||||||| |||||||||||||||||||||||| |   ||  |    
T  13210185 cgtgcgacaaagatcacatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctactcgccatggcgagttcggtcacattc 13210086  T
Q  100 tcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaagg 199  Q
    ||| | |   ||||||||||  |||||||| |||||| |||||||||   |||||||| ||||| |||| ||||||| |||||||||||| |||||||||    
T  13210085 tca-agagttttcattctaag-tctttccaggttcaatctcattctactttctttcctaatcat-attagacatgtttaggcactcaaaagcatctaagg 13209989  T
Q  200 ttcaacttaaaggtcaaa 217  Q
    ||||||| ||| ||||||    
T  13209988 ttcaactcaaaagtcaaa 13209971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 40213526 - 40213339
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  ||||  ||||||||| |||||||||| |||||| ||||| ||| | ||||    
T  40213526 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaag-ttcattctacaatctttccaggttcaatctcatcctacattctt 40213428  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||| | |||||| ||| ||| |||| ||||||||| |  |||||||||    
T  40213427 tcctaatcattattagacatgttcaggcactcaaaagcatctaatgatcaactcaaaagtcaaaatcacgaaatcttgcaagctctctg 40213339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 14179705 - 14179800
Alignment:
Q  122 tctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  14179705 tctttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 14179800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 14572904 - 14573066
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||||||||||||||||||   | |   |||   ||||||||||  |||||||| |||||| ||||||||| | ||||    
T  14572904 tcgcgaggcgagagcctctactcgccatggcgagttcaggtcagatttccaaaggtttcattctaag-tctttccaggttcaatctcattctacattctt 14573002  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||  ||||||||| |||||| ||| ||||||    
T  14573003 tcctaatcattattagacatgttcaggcactcaaaggcatctaaggatcaactcaaaagtcaaa 14573066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 228
Target Start/End: Original strand, 17488172 - 17488347
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| |||||| |||||||   | || || ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||    
T  17488172 tcgcgaggcgagagcctctgctcgccgtggcgatttcaggtcagaatcctacaagtttcattctacaatctttccaggttcaatctcatcctacattctt 17488271  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaatt-acgaaatct 228  Q
    |||| ||||| |||| |||||||||||||||||||  ||||||||| ||| || ||| |||||||| |||||||||    
T  17488272 tcctaatcattattagacatgttcaggcactcaaaggcatctaaggatcatctcaaaagtcaaattcacgaaatct 17488347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 26687202 - 26687365
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||    
T  26687202 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctt 26687301  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| ||||||| |||||||||||| ||||||||| |||||| ||| ||||||    
T  26687302 tcctaatcattattagacatgtttaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 26687365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 12340016 - 12340230
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||       | |||||||||||| |||||| ||||||||||||||||||| |  |  |    
T  12340016 cgtgcgacaaagatcacatttaacctaaacaaggcattatgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttcagttagat-t 12340114  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  ||||||||||  |||||||| |||||| ||||| ||| | |||||||| ||||  |||| |||||||||||||||||||  ||||||||||    
T  12340115 ctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggt 12340213  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  12340214 tcaactcaaaagtcaaa 12340230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 14665869 - 14666083
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||       | |||||||||||| |||||| |||||||| ||||||||| ||   | |    
T  14665869 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccattgcgagttca-gtcagatt 14665967  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  |||||||| || |||||||| |||||| ||||| ||| | |||||||| ||||  ||||  |||||||||||||||||  |||||||||||    
T  14665968 ctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggcactcaacgacatctaaggt 14666066  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  14666067 tcaactcaaaagtcaaa 14666083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 14735382 - 14735596
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||       | |||||||||||| |||||| |||||||| ||||||||| ||   | |    
T  14735382 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccattgcgagttca-gtcagatt 14735480  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  |||||||| || |||||||| |||||| ||||| ||| | |||||||| ||||  ||||  |||||||||||||||||  |||||||||||    
T  14735481 ctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggcactcaacgacatctaaggt 14735579  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  14735580 tcaactcaaaagtcaaa 14735596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 14669024 - 14669238
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||| ||||||||||||||| |||||||||||       | |||||||| ||| |||||| ||||||||||||||||||| |   | |    
T  14669024 cgtgcgacaaagatcgaatttaacctaaacaaggcattctgtaatactagtgctcgcgaggtgagagcctctgctcgccatggcgagttcag-tcagatt 14669122  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  ||||||||||  |||||||| |||||| ||||| ||| | ||||||||  |||  |||| ||||||||||||||||||  |||||||||||    
T  14669123 ctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattctttcctattcaatattagacatgttcaggcactcaacgacatctaaggt 14669221  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  14669222 tcaactcaaaagtcaaa 14669238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 241
Target Start/End: Original strand, 14973172 - 14973357
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcaggtgc-aactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatcttt 154  Q
    |||||||||| |||||| |||||| ||||||||||||||   || ||   |||| ||| ||||||||||||| |  ||| || ||||||||| | |||||    
T  14973172 gcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattcc--aaaagttctttctaaaatcttttctggtttaatctcattctacattcttt 14973269  T
Q  155 ccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    ||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||| |||| ||||||||| |  |||||||||    
T  14973270 cctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatcttgcaagctctctg 14973357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 18438906 - 18439012
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||||| |||||||| |||||| |||||| || | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||    
T  18438906 ttcattctaaa-tctttccaggttcaatctcattttacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaa 18439004  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  18439005 aagtcaaa 18439012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 23275129 - 23275211
Alignment:
Q  127 ccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||||||| |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  23275129 ccaagttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatctaaggttcaacttaa 23275211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 17499710 - 17499817
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| |||||||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||  ||||||||| ||| || ||    
T  17499710 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggatcatctcaa 17499809  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  17499810 aagtcaaa 17499817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 22110004 - 22109926
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| ||||  |||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  22110004 gttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaaacatctaaagttcaacttaa 22109926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 14501565 - 14501678
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||||| |||| | ||| ||| ||| || ||| |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  14501565 aaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaccttgcctaatcattattatacatattcaggcactcaaaatcatctaaggttcaa 14501664  T
Q  205 cttaaaggtcaaat 218  Q
    ||||| || |||||    
T  14501665 cttaagggacaaat 14501678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 20698182 - 20698090
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||| ||||||||| |||||||||||||||| ||| ||||||    
T  20698182 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaactcaaaagtcaaa 20698090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37251023 - 37250932
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||| || | |||||||||| ||| |  |||||||||||||||  |||||||||||| |||||||||||| ||||||||||||||    
T  37251023 cgtgcgacaaaggtcacttttaacctaa-caaggtgttctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 13442589 - 13442724
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| |||| |||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | | ||    
T  13442589 tcgcgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattttt 13442688  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaa 189  Q
    |||| ||||| |||| ||||||||||||||||||||    
T  13442689 tcctaatcattattagacatgttcaggcactcaaaa 13442724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 14576638 - 14576476
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||| ||||| ||||||||   | |   |||   ||||||||||  |||||||| ||||||  |||||||| | ||||    
T  14576638 tcgcgaggcgagagcctctactcgccgtggcgtgttcaggtcagatttccaaaggtttcattctaag-tctttccaggttcaatgtcattctacattctt 14576540  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    | || ||||| |||| |||||||||||||||||||  ||||||||| |||||| ||| ||||||    
T  14576539 ttctaatcataattagacatgttcaggcactcaaaggcatctaaggatcaactcaaaagtcaaa 14576476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 12399608 - 12399673
Alignment:
Q  152 tttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  12399608 tttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 12399673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 217
Target Start/End: Complemental strand, 23083168 - 23083004
Alignment:
Q  53 ttcgcgaggcgagggcctctactcgccatggcgagttcaggtgca-actcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatc 151  Q
    ||||||||||||| ||||||||||||||||||||||| |||  || | ||  ||||  |||||||| ||||||||||| || ||| ||||| ||| | |     
T  23083168 ttcgcgaggcgagagcctctactcgccatggcgagttaagggtcagaatccaaaaagtttcattct-aaatctttccaggtccaatctcatcctacattt 23083070  T
Q  152 tttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    | |||| ||||  |||| |||| | ||||||||||||| ||||||||| |||||| ||| ||||||    
T  23083069 tgtcctaatcactattagacatatccaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 23083004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 45797609 - 45797722
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||||| |||| | ||| ||| ||| || ||| |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| ||||||| ||||||    
T  45797609 aaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttacctaatcattattatacatattcaggcactcaaaatcatctaaagttcaa 45797708  T
Q  205 cttaaaggtcaaat 218  Q
    ||||| || |||||    
T  45797709 cttaagggacaaat 45797722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 17247239 - 17247163
Alignment:
Q  141 attctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| | |||||||| ||||| |||| |||||||| ||||||||||||||||||||| |||||| ||| ||||||    
T  17247239 attctacattctttcctaatcattattagacatgttccggcactcaaaaacatctaaggatcaactcaaaagtcaaa 17247163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 316595 - 316666
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||||||||||| |||| ||||||    
T  316595 ctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaacatctaaagttcgacttaa 316666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 4588553 - 4588458
Alignment:
Q  122 tctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| || |||||| ||||| ||| | |||||||| ||||  |||| |||||||||||||||||||  |||||||||||||||| ||| ||||||    
T  4588553 tctttacaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaa 4588458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 22791719 - 22791774
Alignment:
Q  160 tcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtca 215  Q
    ||||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  22791719 tcatcatcatacaagttcagacactcaaaaacatctaaggttcgacttaaaggtca 22791774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 23412895 - 23412824
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||| ||||||| ||| ||| |||||  |||||||| ||||||||||||||| |||||||||||||||||||    
T  23412895 ctcaatctaaaaacttgcctaatcatttttatacatattcaggcactcaaaatcatctaaggttcaacttaa 23412824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 43927572 - 43927650
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| |||  || ||||| ||||||||||||||||||||||||| ||||||| |||| ||||||    
T  43927572 gttcaaactcaatctaaaaacttgtctaatcattattatacatgttcaggcactcaaaatcatctaaagttcgacttaa 43927650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 606027 - 605942
Alignment:
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||||| |||| |||| ||  || ||| ||||| ||||||||  ||||||||||||||| |||||||||||||||||||    
T  606027 tttccaggttcaatctcaatctagaaaattgcctaatcattattatacacattcaggcactcaaaatcatctaaggttcaacttaa 605942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 30030214 - 30030318
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa-ttacga 223  Q
    ||||| |||||| ||||| | | | |||||| | ||||| |||| |||||||||| ||||||||  |||||||||||||||| ||| |||||| ||||||    
T  30030214 ttccaggttcaatctcatcccacattctttcgtaatcattattagacatgttcagacactcaaaggcatctaaggttcaactcaaaagtcaaatttacga 30030313  T
Q  224 aatct 228  Q
    |||||    
T  30030314 aatct 30030318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 43842572 - 43842656
Alignment:
Q  133 tcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| ||| | |||||||| ||||| |||| ||||| |||||||||||||| ||||||||| |||||| ||| ||||||    
T  43842572 tcaatctcatcctacattctttcctaatcattattagacatgctcaggcactcaaaagcatctaaggatcaactaaaaagtcaaa 43842656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4588645 - 4588602
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaa 44  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  4588645 cgtgcgacaaagctcgcatttaacctaaacaaggcattctgtaa 4588602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 15877514 - 15877472
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  15877514 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 15877472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 606172 - 606135
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  606172 tcgcgaggcgaggacctctactcgccatggcgagttca 606135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 23052762 - 23052721
Alignment:
Q  176 tcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||||| | ||||||||    
T  23052762 tcaggcactcaaaaacatctaaggttcaactcacaggtcaaa 23052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 321697 - 321658
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  321697 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 321658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 12173221 - 12173260
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  12173221 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 12173260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 12378388 - 12378459
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
    |||||| |||| ||||||| | | ||| ||||| ||| ||||| ||||||||||||||| ||||||||||||    
T  12378388 gttcaatctcaatctaaaaacatgcctaatcattattgtacatattcaggcactcaaaatcatctaaggttc 12378459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 17524857 - 17524818
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  17524857 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 17524818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 22110155 - 22110116
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  22110155 tcgcgaggcgagagcctctactcgctatggcgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 9578082 - 9578136
Alignment:
Q  143 tctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||||||| ||| ||||| || |||||||||||||||||||||  |||||||    
T  9578082 tctaaaatcttgcctaatcattatcatacatgttcaggcactcaaagtcatctaa 9578136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 37250841 - 37250763
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| |||||||||||||||  ||||| || ||||||| |||| ||||||    
T  37250841 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcagatactcagaatcatctaaagttcgacttaa 37250763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 16369845 - 16369882
Alignment:
Q  180 gcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  16369845 gcactcaaaagcatctaaggttcaactcaaaggtcaaa 16369882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 16839476 - 16839439
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  16839476 tcgcgaggcgagcgcctctactcgctatggcgagttca 16839439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 17674258 - 17674209
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaat 226  Q
    |||||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  17674258 aggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 17674209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 20698242 - 20698202
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  20698242 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 20698202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 45797434 - 45797470
Alignment:
Q  4 gcgacaaagatcgcatttaacctaaacaaagcattct 40  Q
    ||||||||||||||||||||||||||| || ||||||    
T  45797434 gcgacaaagatcgcatttaacctaaaccaaacattct 45797470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 7075 - 7323
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    |||||||||  |||||||||||||||||||| ||||||||||||| |  || |||| ||||||| |||||||||||||||||||||||||||| ||  ||    
T  7075 gtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctctactcgccatggcgagttcaggttcagttc 7174  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    | |||| ||||||||||||||||||||| |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||| |    
T  7175 acaaaa-attcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggat 7273  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  7274 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctc 7323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 8280 - 8494
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||| |||||||||| ||||  |||||| ||||||||| ||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  8280 cgtgagacaaagatcacattatacctaa-caaagcattatgtaactggacaactcgcgaggcgagggcctccactcgccatggcgagttcaggtgtaact 8378  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   ||||| |||||| |||| |||| ||||||| || ||||| |||| |||| ||||| ||| ||||||||| ||||||    
T  8379 c-ccaaaaatccattcttaaactattccaggttcaatctcaatctagaatcttttctaatcattattacacatattcagacacccaaaaacatttaaggt 8477  T
Q  201 tcaacttaaaggtcaaa 217  Q
    ||||||||| |||||||    
T  8478 tcaacttaagggtcaaa 8494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 5889033 - 5888818
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  5889033 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaact 5888934  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  ||| ||||||||| |||   ||||| |||||| |||| |||| |||||||||| |||||||| ||||| ||||||||||||||||||||||||| |    
T  5888933 ca-caaagattcattcttaaactattccatgttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacatctaagct 5888835  T
Q  201 tcaacttaaaggtcaaa 217  Q
    || ||||||||||||||    
T  5888834 tcgacttaaaggtcaaa 5888818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 21329353 - 21329127
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || | ||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  21329353 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgctatggcgagttcaagtgcaact 21329254  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   ||||||||||||  ||||  ||||| |||||| |||| |||| ||||||| || ||||| | || |||||||||||||||||||||||||||||||    
T  21329253 c-ccaaaaattcattcctaaattattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacatctaaggt 21329155  T
Q  201 tcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||| |||||||||||||    
T  21329154 tcaacttaaaggtcaaaattacgaaatc 21329127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 21565807 - 21566056
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||||| || |||||||  |||||||||||| |  || || ||||||||| |||||| ||||||||||||||||||||| ||| |    
T  21565807 cgtgcgacaaagatcgcattttacataaacaagtcattctgtaactagttagctcacgaggcgagagcctctgctcgccatggcgagttcaggtacaatt 21565906  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  |||| |||||||||||||||||||| |||||| ||||||||  |||||||||| ||||| |||| ||||||||||||||||||||||||||||||     
T  21565907 cacgaaaa-ttcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagga 21566005  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||||||||||||||||| ||||||||| || |||||    
T  21566006 tcaactcaaaagtcaaaattacgaaatctggacagctctctggtcatgctc 21566056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 22959379 - 22959142
Alignment:
Q  13 atcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattc 112  Q
    |||||||||||||||||||| ||||||||||||| |  || |||||||||||| |||||||||||||||||||||||||||| ||  ||| ||||| |||    
T  22959379 atcgcatttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaa-ttc 22959281  T
Q  113 attctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaagg 212  Q
    |||||||| ||| |||| |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||| |||||| ||| |    
T  22959280 attctaaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggatcaactcaaaag 22959181  T
Q  213 tc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    || |||||||||||| |||||||||||||| || |||||    
T  22959180 tcaaaattacgaaatttggatagctctctggtcatgctc 22959142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 19669163 - 19669412
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    |||||||||  ||| |||||| ||||||||| ||||||||||||| |  || | | |||||||| |||||||| ||||||||||||||||||| ||| ||    
T  19669163 gtgcgacaagaatcacatttatcctaaacaaggcattctgtaactagttagctggtgaggcgagagcctctacacgccatggcgagttcaggtacaattc 19669262  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    | ||||||||||||||||| |||||||| |||||| |||||||   |||||||||| ||||| |||| |||||||||| ||||||||||||||||||| |    
T  19669263 acaaaaaattcattctaaagtctttccacgttcaatctcattccccaatctttcctaatcattattagacatgttcagacactcaaaaacatctaaggat 19669362  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  19669363 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctc 19669412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21741401 - 21741186
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||| ||||||||||||||  |||| |||||||||  || || ||||||||| ||||||||||||||||||||||||||||||||||    
T  21741401 cgtgcgacaaagatcgcttttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcgagttcaggtgcaact 21741302  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  | |||||| |||| |||   ||||| |||||| |||| |||| ||||||||||  ||||||| ||||| ||||||||||||||||| |||||||||    
T  21741301 ca-cataaattcgttcttaaactattccaggttcaatctcaatctataatctttcctattcatcatcatacaagttcaggcactcaaaaatatctaaggt 21741203  T
Q  201 tcaacttaaaggtcaaa 217  Q
    || ||||||||||||||    
T  21741202 tcgacttaaaggtcaaa 21741186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 22144315 - 22144508
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| ||||||||||||||||||  |||||||||||| |||||||||||| |||||||||||||||| ||||    
T  22144315 cgtgcgacaaagatcgcaaa-atcctaaacaa-gcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaact 22144412  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |   |||||| |||||| ||||  ||||| |||||| |||| |||| |||||||||| |||||  ||| |||||||||||||||||||| |||||||    
T  22144413 c-ccaaaaatccattcttaaattattccaggttcaatctcaatctagaatctttcctaatcattgttacacatgttcaggcactcaaaatcatctaa 22144508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 26011891 - 26011685
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||| |||||||||| |||||||||||| ||||||||||||||||| | ||  ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  26011891 cgtgtgacaaagatcacatttaacctaa-caaagcattctgtaactagacaactcgcgaggcgaaggcctctactcgccatggcgagttcaggtgtaact 26011793  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   ||||| |||||| |||| | || |||||||| | ||||| |||| ||||||| || |||||| || ||||||| ||    
T  26011792 c-ccaaaaatccattcttaaactattccaggttcaatctcaatttagaatctttcttaatcattattacacatgtttagacactcataatcatctaaagt 26011694  T
Q  201 tcaacttaa 209  Q
    |||||||||    
T  26011693 tcaacttaa 26011685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 250
Target Start/End: Complemental strand, 11581072 - 11580854
Alignment:
Q  32 aagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaag 131  Q
    ||||||||||||| ||||    |||||||||||| |||||| |||||||||||||||||||||   | || | |||  || |||||||||||| |||| |    
T  11581072 aagcattctgtaaatgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattc-tcaaagttttattctaaaatctatccagg 11580974  T
Q  132 ttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctgg 230  Q
    ||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| | ||||||| |||||| ||| ||| |||| ||||||| |||    
T  11580973 ttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcttctaaggatcaactcaaaagtcaaaatcacgaaatttgg 11580874  T
Q  231 atagctctctgctcctgctc 250  Q
    ||||||||||| || |||||    
T  11580873 atagctctctggtcatgctc 11580854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 36154684 - 36154437
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| ||||||||||| | ||    |||||||||||| ||||||||||||||||||||||||||||   | |    
T  36154684 cgtgcgacaaagatcgcaaa-atcctaaacaa-gcattctgtaaataggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagatt 36154587  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    | | |||  || |||||||||||| |||| |||||| |||| |||| | |||||||| ||||| |||| ||||||||| |||||||||| |||||||||     
T  36154586 c-tcaaagttttattctaaaatctatccaggttcaatctcactctacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaagga 36154488  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||||||| ||| |||| | ||||| |||||||||||||| || |||||    
T  36154487 tcaacttaaaagtcaaaatcatgaaatttggatagctctctggtcatgctc 36154437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 22120050 - 22119836
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||       | |||||||||||| |||||| ||||||||||||||||||| |   | |    
T  22120050 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagatt 22119952  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  ||||||||||  |||||||| |||||| ||||| ||| | |||||||| ||||  |||| |||||||||||||||||||  ||||||||||    
T  22119951 ctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggt 22119853  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  22119852 tcaactcaaaagtcaaa 22119836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 1096783 - 1096945
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||| |||||||||||||| ||  |    |||| ||||||||  ||||||||||  ||||| ||||| ||| | ||||    
T  1096783 tcgcgaggcgagagcctctactcgccgtggcgagttcaggt-cagatttccaaaagttcattctgcaatctttccagattcaatctcatcctacattctt 1096881  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  1096882 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 1096945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 21985952 - 21985790
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    ||||||||||||||||||| || ||| ||||||||||||||   | |   ||||  ||||||||||| |||||||| |||||| ||||||||| | ||||    
T  21985952 tcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattctacattctt 21985854  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  21985853 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 21985790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 217
Target Start/End: Complemental strand, 23390298 - 23390139
Alignment:
Q  58 gaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcct 157  Q
    |||||||  ||||||||||||||||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||||||    
T  23390298 gaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcct 23390199  T
Q  158 tatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
     ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  23390198 aatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 23390139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 21871426 - 21871214
Alignment:
Q  3 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactca 102  Q
    |||||||| |||||| |||||||||  ||| ||||||||||  |||  || ||||||| || | |||||||||||||||||||||| |||||   | |||    
T  21871426 tgcgacaaggatcgcgtttaacctag-caaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatca 21871328  T
Q  103 taaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
     ||||  | ||||| | |||||||||| |||||| ||||| ||| | |||||||| ||||| | || |||||||||||||||||||| ||||||||||||    
T  21871327 caaaag-tccattccataatctttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttc 21871229  T
Q  203 aacttaaaggtcaaa 217  Q
    |||| ||| ||||||    
T  21871228 aactcaaaagtcaaa 21871214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 21875706 - 21875494
Alignment:
Q  3 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactca 102  Q
    |||||||| |||||| |||||||||  ||| ||||||||||  |||  || ||||||| || | |||||||||||||||||||||| |||||   | |||    
T  21875706 tgcgacaaggatcgcgtttaacctag-caaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggtcagaatca 21875608  T
Q  103 taaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
     ||||  | ||||| | |||||||||| |||||| ||||| ||| | |||||||| ||||| | || |||||||||||||||||||| ||||||||||||    
T  21875607 caaaag-tccattccataatctttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttc 21875509  T
Q  203 aacttaaaggtcaaa 217  Q
    |||| ||| ||||||    
T  21875508 aactcaaaagtcaaa 21875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 21498752 - 21498660
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| |||| |||| ||||| |||| || || |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21498752 ttccaggttcaatctcaatctacaatctctcctaataattattatacatgttcaggcactcaaaaacatccaaggttcaacttaaaggtcaaa 21498660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 24529536 - 24529699
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| |||||||||||| |   | |   ||||  ||||||||| || ||||||| |||||| ||||| ||| | ||||    
T  24529536 tcgcgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatcctacattctt 24529635  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| ||||||||||||||| |||| ||||||||| |||||| ||| ||||||    
T  24529636 tcctaatcattattagacatgttcaggcactgaaaagcatctaaggatcaactcaaaagtcaaa 24529699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 25431710 - 25431872
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||| ||| ||||||||||||| ||||||||||| ||   | |   ||||  ||||||||||| |||||||| || ||| ||||| ||||| ||||    
T  25431710 tcgcgaggtgagagcctctactcgccgtggcgagttcaagtcagatttccaaaagtttcattctaaa-tctttccaggtccaatctcatcctaaattctt 25431808  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| | || |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  25431809 tcctaatcattaataaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 25431872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 9078268 - 9078430
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgc-aactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatct 152  Q
    |||||||||||| |||||| |||||| ||||||||||||||   || ||| |||   ||||||||||| |||||||| |||||| ||||||||| | | |    
T  9078268 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattca-aaaggtttcattctaaa-tctttccaggttcaatctcattctacatttt 9078365  T
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| ||||| |||| |||||||||||||||||||| ||| ||| | |||||| ||| ||||||    
T  9078366 ttcctaatcattattagacatgttcaggcactcaaaagcatataaagatcaactcaaaagtcaaa 9078430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 13095810 - 13095972
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    ||||||||||||||||||| |||||  ||||||||||||||   | ||  | ||  ||||||||||| |||||||| || ||| ||||| ||| | ||||    
T  13095810 tcgcgaggcgagggcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctaaa-tctttccaggtccaatctcatcctacattctt 13095908  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| ||||||||||||  |||||| ||||||||| |||||| ||| ||||||    
T  13095909 tcctaatcattattagacatgttcaggctttcaaaagcatctaaggatcaactcaaaagtcaaa 13095972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 19660575 - 19660480
Alignment:
Q  122 tctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||| ||| || ||||||| | | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  19660575 tctttccaggtttaatctcattccacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 19660480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 25421848 - 25422010
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||| ||||||||||| ||   | |    |||  ||||||||||| |||||||| || ||| ||||| ||||  ||||    
T  25421848 tcgcgaggcgagagcctctactcgccgtggcgagttcaagtcagatttccgaaagtttcattctaaa-tctttccaggtccaatctcatcctaagttctt 25421946  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| | || |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  25421947 tcctaatcattaatagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 25422010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21502010 - 21501918
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtg 95  Q
    ||||||||||| ||||||||||||| || ||| |||||||| ||||||| |  |||||||||||| |||||||||||| ||||||||||||||||    
T  21502010 cgtgcgacaaatatcgcatttaacccaa-caaggcattctg-aactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtg 21501918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 24767194 - 24766991
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||| |||||||||||||||| |||||||||||       | |||||||||||| |||||| ||||||||| |||||||| ||   | |    
T  24767194 cgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatgacgagttca-gtcagatt 24767096  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  |||||||| || ||||||||  ||||| ||||| ||| | |||||| | ||||  |||| |||||||||||||||||||  ||||||||||    
T  24767095 ctccaaagtttcattct-aagtctttccagattcaatctcatcctacattctttcgtaatcaatattagacatgttcaggcactcaaaggcatctaaggt 24766997  T
Q  201 tcaact 206  Q
    ||||||    
T  24766996 tcaact 24766991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 21292716 - 21292624
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| || || |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  21292716 ttccaggttcaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 21292624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 24493887 - 24494046
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcc 156  Q
    ||||||||  |||||| |||||| ||||||||||||||   | ||  ||||  ||||||||||| |||||||| |||||| ||||| ||| | |||||||    
T  24493887 cgaggcgaaagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaa-tctttccaggttcaatctcatcctacattctttcc 24493985  T
Q  157 ttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    | ||||| |||| ||||||||||||  |||||| ||| ||||| |||||| ||| ||||||    
T  24493986 taatcattattagacatgttcaggcgttcaaaagcatttaaggatcaactcaaaagtcaaa 24494046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 20026592 - 20026506
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||||||||||||||||||| ||||||| | || |||||| |||||||    
T  20026592 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagatcgacttaagggtcaaa 20026506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 22177872 - 22177794
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| |||||| ||||||||||||    
T  22177872 gttcaaactcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatctagggttcaacttaa 22177794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 22075419 - 22075486
Alignment:
Q  150 tctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  22075419 tcttacctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 22075486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 8286588 - 8286496
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||| | ||||| |||| |||||||| ||||||||||  |||||||||||||||| ||| ||||||    
T  8286588 ttccaggttcaatctcatcctacattctttcttaatcattattagacatgttccggcactcaaatgcatctaaggttcaactcaaaagtcaaa 8286496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 13025626 - 13025777
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    ||||||||||||||||| | |||||  ||||||||||||||   | ||  | ||  ||||||||||| |||||||| || ||| ||||| ||| | ||||    
T  13025626 tcgcgaggcgagggcctttgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctaaa-tctttccaggtccaatctcatcctacattctt 13025724  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| ||||| |||| ||||||||||||  ||||||  |||||||| ||||||    
T  13025725 tcctaatcattattagacatgttcaggctttcaaaagtatctaaggatcaact 13025777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 23201802 - 23201844
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  23201802 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 23201844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 37724337 - 37724379
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  37724337 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 37724379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 25744037 - 25744074
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||||||||||||||||    
T  25744037 tcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 26732489 - 26732421
Alignment:
Q  129 aagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||||  ||| ||||||| ||| ||| |||||  |||||||||||||||||||||||| |||||||    
T  26732489 aagttcaatttcaatctaaaaacttgcctaatcattcttatacatgttcaggcactcaaaatcatctaa 26732421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 18769687 - 18769648
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  18769687 aggcactcaaaagcatctaaggttcaacttaaaagtcaaa 18769648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 21887260 - 21887299
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  21887260 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 21887299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 22107094 - 22107027
Alignment:
Q  150 tctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||| ||||  |||| |||||||||||||||||||  ||||||| |||||||| ||| ||||||    
T  22107094 tctttcctaatcaatattagacatgttcaggcactcaaacgcatctaaagttcaactcaaaagtcaaa 22107027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 206
Target Start/End: Complemental strand, 23501031 - 23501000
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||||||||||||||||||||||||||||||    
T  23501031 ttcaggcactcaaaaacatctaaggttcaact 23501000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 26740301 - 26740234
Alignment:
Q  130 agttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||||  ||| ||||||| ||| ||| |||||  |||||||||||||||||||||||| |||||||    
T  26740301 agttcaatttcaatctaaaaacttgcctaatcattcttatacatgttcaggcactcaaaatcatctaa 26740234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 15796738 - 15796774
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15796738 tcgcgaggcgagggcctctactcgcc-tggcgagttca 15796774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 19660642 - 19660606
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttc 90  Q
    |||||||||||| |||||| |||||||||||||||||    
T  19660642 tcgcgaggcgagagcctctgctcgccatggcgagttc 19660606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 21292776 - 21292736
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  21292776 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 21292736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 22075334 - 22075374
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  22075334 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 22075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 22107179 - 22107139
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||||||| ||||||||||    
T  22107179 tcgcgaggcgagagcctctgctcgccatggtgagttcaggt 22107139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 23512543 - 23512571
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||||||||||||||||||||    
T  23512543 aggcactcaaaaacatctaaggttcaact 23512571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 45648 - 45398
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||| |||||||||  |||||||||||| |  || |||||||||||| |||||||||||||||||||||||||||| ||| |    
T  45648 cgtgcgacaaagatcgcatttatcctaaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtacaatt 45549  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||||||||||||||| |||| ||| |||||| |||||||   |||||||||| ||||| |||| |||| |||||||||||||||||||||||||     
T  45548 cacaaaaaattcattctaaagtcttaccaggttcaatctcattccccaatctttcctaatcattattagacatattcaggcactcaaaaacatctaagga 45449  T
Q  201 tcaacttaaaggt-caaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||  ||||||| ||||||||||||||||||| || |||||    
T  45448 tcaactcaaaagtaaaaattacaaaatctggatagctctctggtcatgctc 45398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 397 - 633
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    |||||||||||||||||||| ||| |||  |||||||||||||||    |||||||||||| |||||| ||||||||||||||||||||||||||||| |    
T  397 cgacaaagatcgcatttaacataagcaagacattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcaca 496  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    ||| |||||||||||||||||||||||||||| ||||||||  |||||||||| ||||| |||| ||||||| |||||||||||||  ||||||| ||||    
T  497 aaa-attcattctaaaatctttccaagttcaatctcattctccaatctttcctaatcattattagacatgtttaggcactcaaaaaagtctaaggatcaa 595  T
Q  205 cttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
     | ||| ||| |||||||||||||||||||||||||||    
T  596 ttcaaaagtcaaaattacgaaatctggatagctctctg 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 19530 - 19778
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||| ||||||||||||| ||| |||  |||||||||||||||   ||||||||||||| |||||| |||||||||||||||||||||||||| |    
T  19530 gtgcgacaaggatcgcatttaacataagcaagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaacac 19629  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    |||||| ||||||||||||||||||||| |||||| ||||||||  |||| ||||| ||||| |||| |||||||||||||||||||||||||||||| |    
T  19630 ataaaa-attcattctaaaatctttccaggttcaatctcattctccaatccttcctaatcattattagacatgttcaggcactcaaaaacatctaaggat 19728  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| | | ||| ||||||| |||||| |||||||||||| || |||||    
T  19729 caactcagaagtcaaaattacaaaatctagatagctctctggtcatgctc 19778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 48154 - 48104
Alignment:
Q  167 tatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||| ||||| ||||||||||||||||||||||| || ||| ||||||    
T  48154 tatacatcttcagacactcaaaaacatctaaggttcatctcaaaagtcaaa 48104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 6876 - 7102
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||  || | |||||||||||||||||||||||||||||||||||||||| || |    
T  6876 cgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaatt 6975  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   ||||| |||||| || | |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  6976 c-ccaaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggt 7074  T
Q  201 tcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||| |||||||||||||    
T  7075 tcaacttaaaggtcaaaattacgaaatc 7102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 14256 - 14482
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||  || | |||||||||||||||||||||||||||||||||||||||| || |    
T  14256 cgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaatt 14355  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   ||||| |||||| || | |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  14356 c-ccaaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggt 14454  T
Q  201 tcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||| |||||||||||||    
T  14455 tcaacttaaaggtcaaaattacgaaatc 14482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 13204 - 13442
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||| |||||||||| |||||||||||| ||| |||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  13204 cgtgtgacaaagatcacatttaacctaa-caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 13302  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  ||||||||||||| |||   ||||| |||||| || | |||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  13303 ca-caaaaattcattcttaaactattccaggttcaatcttaatctccaatctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggt 13401  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctct 240  Q
    |||||| ||||||| |||||||||||||  || ||||||||    
T  13402 tcaactcaaaggtcaaaattacgaaatcatgacagctctct 13442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15688 - 15462
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||||||  || |||||||||||||||||||||||||||||||||||||| ||| || |    
T  15688 cgtgcgacaaagatcacatttaacataaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaatt 15589  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   ||||| |||||| |||| |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  15588 c-cgaaaaatccattcttaaactattccaggttcaatctcaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggt 15490  T
Q  201 tcaactt-aaaggtcaaattacgaaatc 227  Q
    ||||||| |||| | |||||||||||||    
T  15489 tcaacttaaaagttaaaattacgaaatc 15462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 3195 - 3444
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||  ||||    
T  3195 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttcaggtataact 3294  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   | || ||| |||| |||   ||||| |||||| |||| |||  |||||||||| ||||| |||| ||||||||||||||||||||||||||||||     
T  3295 c-ccacaagttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagga 3393  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| |||||||||||| |||||||||||||| || |||||    
T  3394 tcaactcaaaagtcaaaattacgaaatatggatagctctctggtcatgctc 3444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 5976 - 5754
Alignment:
Q  4 gcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcat 103  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||| ||      
T  5976 gcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaaatc-- 5879  T
Q  104 aaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttca 203  Q
    | ||||| ||| || |||   || |  |||||| |||| |||| ||| |||||| ||||| |||||||||||||||| ||||||||||||||||| ||||    
T  5878 acaaaatccatccttaaactattactggttcaatctcaatctacaatttttcctaatcattattatacatgttcaggtactcaaaaacatctaagattca 5779  T
Q  204 acttaaaggtcaaat-tacgaaatc 227  Q
    ||||||||||||||| |||||||||    
T  5778 acttaaaggtcaaatctacgaaatc 5754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 888 - 660
Alignment:
Q  4 gcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcat 103  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||||||      
T  888 gcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaactc-- 791  T
Q  104 aaaaaattcattctaaaatctttccaagt------tcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    | ||||| ||| || |||   || || ||      |||| |||| |||| |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  790 acaaaatccatccttaaactattacaggttcaatctcaatctcaatctacaatctttcctaatcattattatacatgttcaggcactcaaaaacatctaa 691  T
Q  198 ggttcaacttaaaggtcaaat-tacgaaatc 227  Q
    | ||||||||||||||||||| |||||||||    
T  690 gattcaacttaaaggtcaaatctacgaaatc 660  T

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Target: scaffold0034 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 32800 - 33006
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  32800 cgtgcgacaaagatcgcatttaacccaa-caaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaact 32898  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| | |   |||||||||||| |||| |||| |||||||||| ||||| |||| ||||||||||||||||| || ||||||| ||    
T  32899 c-ccaaaaatccattcttagactattccaagttcaatctcaatctagaatctttcctaatcattattacacatgttcaggcactcagaatcatctaaagt 32997  T
Q  201 tcaacttaa 209  Q
    |||||||||    
T  32998 tcaacttaa 33006  T

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Target: scaffold0034; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 56 - 250
Target Start/End: Complemental strand, 51688 - 51493
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttc 155  Q
    |||||| ||| |||||| |||||| ||||||||||||||  || ||  | ||  ||||||| | |||||||||| |||||| ||||| ||| | ||| ||    
T  51688 gcgaggtgagagcctctgctcgccgtggcgagttcaggtcaaaatcccacaagtttcattcgacaatctttccaggttcaatctcatcctacattctctc 51589  T
Q  156 cttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    || ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||| |||| ||||||| |||||||||||||| || |||||    
T  51588 ctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatttggatagctctctggtcatgctc 51493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 132916 - 133165
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagt--tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaa 98  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||  |   |||  |||||||||||| |||||| ||||||||||||||||||||| ||     
T  132916 cgtgcgacaaagatcacatttaacctaaacaaggcattatgtaa--gacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag 133013  T
Q  99 ctcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaag 198  Q
     ||| ||||  ||||||||||| |||||||| |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||    
T  133014 ttcacaaaat-ttcattctaaagtctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaag 133112  T
Q  199 gttcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    | |||||| ||| ||| |||||||||||||||  |||||||||| || |||||    
T  133113 gatcaactcaaaagtcaaaattacgaaatctgagtagctctctggtcatgctc 133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 160948 - 161197
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||| |||||| ||||| |||  |||||||||||| |  |  ||| |||| ||| |||||||||||||||||||| ||||||| ||  |    
T  160948 cgtgcgacaaagatcacatttatcctaaccaagacattctgtaactagttacctcgtgaggtgagagcctctactcgccatggcgacttcaggttcagtt 161047  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || |||| |||||||||||| ||| |||| |||||| ||||||||  |||||||||| ||||| |||| ||||||||||||||||||||||||||||||     
T  161048 cacaaaa-attcattctaaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagga 161146  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| |||||||||||| |||||||||||||| || |||||    
T  161147 tcaactcaaaagtcaaaattacgaaatttggatagctctctggtcatgctc 161197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 162904 - 162867
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  162904 tcgcgaggcgagcgcctctactcgctatggcgagttca 162867  T

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Target: scaffold0150 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 32347 - 32595
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||        |||||||| ||| |||||| ||||||||||||||||||||| ||  ||    
T  32347 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaacacaagtactcgcgaggtgagagcctctgctcgccatggcgagttcaggttcagttc 32446  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
    | ||||  ||||||||||| |||||||| |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||||||||||||| |    
T  32447 acaaaat-ttcattctaaagtctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggat 32545  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||| ||||||| ||||||| ||||||||||| || |||||    
T  32546 caactcaaaagtcaaaattacaaaatctgaatagctctctggtcatgctc 32595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 25 - 227
Target Start/End: Original strand, 25176129 - 25176331
Alignment:
Q  25 ctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatct 124  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||| | ||||||   |||| |||       
T  25176129 ctaaacaaggcattctgtaactgcgcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactc-tcaaaaatctgttcttaaacta 25176227  T
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacga 223  Q
    ||||| |||||| |||| |||  || ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  25176228 ttccaggttcaatctcaatctccaacctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaactcaaaggtcaaaattacga 25176327  T
Q  224 aatc 227  Q
    ||||    
T  25176328 aatc 25176331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 22134073 - 22133826
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||       ||||||||||||| |||||| ||||||||||||||||||| | ||  |    
T  22134073 cgtgcgacaaagatcgcatttaacctaaacaaggcagtctgtaacacaagtattcgcgaggcgagagcctctgctcgccatggcgagttcagtt-cagtt 22133975  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||  ||||||||||| |||| | | |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||| |||||||||     
T  22133974 cacaaaa--ttcattctaaagtcttcctaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagga 22133877  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||| ||||||||||| ||||||||||| || |||||    
T  22133876 tcaactcaaaagtcaaaagtacgaaatctgaatagctctctggtcatgctc 22133826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 28406242 - 28406436
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgg-gcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaac 99  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||    | | || |||||||||| |||||||||||||||||||||||||||| ||      
T  28406242 cgtgcgacaaggatcgcatttaacctaaacaaggcattatgtaacacaagtactt-gcgaggcgagagcctctactcgccatggcgagttcaggttcagt 28406340  T
Q  100 tcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatcta 196  Q
    ||| ||||  || |||||||||||||| || |||||| ||||||||  |||||||||| || || |||| |||||||||||||||||||| ||||||    
T  28406341 tcacaaaatttt-attctaaaatctttacaggttcaatctcattctccaatctttcctaattattattagacatgttcaggcactcaaaagcatcta 28406436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 250
Target Start/End: Complemental strand, 32451735 - 32451538
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | |||     
T  32451735 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcctacattctc 32451636  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||| |||| ||||||| |||||||||||||| || |||||    
T  32451635 tcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatttggatagctctctggtcatgctc 32451538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 23660341 - 23660500
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcc 156  Q
    ||||||||| |||||| |||||| ||||||||||||||   | ||  ||||  |||||||||||||||||||| |||||| ||||||||| | |||||||    
T  23660341 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagattcc-aaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcc 23660439  T
Q  157 ttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    | ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  23660440 taatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 23660500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 298620 - 298458
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | ||  | ||  ||||||||||| |||||||| |||||| ||||| ||| | ||||    
T  298620 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaa-tctttccaggttcaatctcatcctatattctt 298522  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  298521 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 298458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 217
Target Start/End: Original strand, 27753892 - 27754053
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttc 155  Q
    |||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||||    
T  27753892 gcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttc 27753991  T
Q  156 cttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    || ||||| |||| ||||||| |||||||||||| ||||||||| |||||| ||| ||||||    
T  27753992 ctaatcattattagacatgttgaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 27754053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 228
Target Start/End: Original strand, 22337431 - 22337605
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgc-aactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatct 152  Q
    |||||||||||| ||||||||||||| |||||| |||||||   |||||| ||||  ||||||||||| |||||||| |||||| ||||| ||| | |||    
T  22337431 tcgcgaggcgagagcctctactcgccgtggcgaattcaggtcagaactca-aaaagtttcattctaaa-tctttccaggttcaatctcatcctacattct 22337528  T
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtca-aattacgaaatct 228  Q
    ||||| ||||| |||| |||||||||  ||||||||| ||||||||| |||||| ||| |||| ||| |||||||||    
T  22337529 ttcctaatcattattagacatgttcatacactcaaaagcatctaaggatcaactcaaaagtcagaatcacgaaatct 22337605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 22730983 - 22730887
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||||||| |||||||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| ||||||    
T  22730983 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaact 22730887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 23071767 - 23071617
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| ||||||||||||||||| |||   | ||   |||  ||||||||||  ||||| || |||||| ||||||||| | ||||    
T  23071767 tcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattctt 23071670  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  23071669 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 23071617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 23708474 - 23708262
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| |||||||||||||||| |  |||| ||||||| |||||||||||| |||||||||||||||| ||||    
T  23708474 cgtgcgacaaagatcgcaaa-atcctaaacaa-gcattctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagttcaggtgtaact 23708377  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   |||| | ||||| |||| ||||  | ||||||| ||||| | || | |||||||| ||||||||||||||||| |     
T  23708376 c-ccaaaaatccattcttaaactattccga-ttcaatctcaatctacgaactttcctaatcattaatacatatgttcagacactcaaaaacatctaaaga 23708279  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| || |||||||    
T  23708278 tcaactcaagggtcaaa 23708262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 22737986 - 22737823
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| |||||||||||| |   | ||  | ||  ||||||||| |||||||| | |||||| ||||| ||| | ||||    
T  22737986 tcgcgaggcgagagcctctgctcgccgtggcgagttcagttcagaatcccacaagtttcattctacaatctttctaggttcaatctcatcctacattctt 22737887  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| | |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  22737886 tcctaatcattattagatatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 22737823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 23076757 - 23076910
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgc-aactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatct 152  Q
    |||||||||||| ||||||||||||| ||||||||||||||   || ||   |||  ||||||||||| |||||||| || ||| ||||| ||| | |||    
T  23076757 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattcc--aaagtttcattctaaa-tctttccaggtccaatctcatcctacattct 23076853  T
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||| || || |||| |||||||||||||||||||| ||||||||| |||||||||    
T  23076854 ttcctaattattattagacatgttcaggcactcaaaagcatctaaggatcaacttaa 23076910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 23286236 - 23286340
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacga 223  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||| ||||||||| |||||||||||||||| ||| ||| |||||||||    
T  23286236 ttccatgttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaactcaaaagtcaaaattacga 23286335  T
Q  224 aatct 228  Q
    |||||    
T  23286336 aatct 23286340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23207543 - 23207634
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||| || |||||||||||| ||| |  |||||||||||||||  |||| ||||||| |||||||||||| ||||||||||||||    
T  23207543 cgtgcgacaaaggtcacatttaacctaa-caaggtgttctgtaactgggcaactcgcaaggcgagagcctctactcgctatggcgagttcagg 23207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 23654145 - 23654053
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| ||||||||||||| |||||| |||||||||||||||| ||| ||||||    
T  23654145 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcagtcaaaagcatctaaggttcaactcaaaagtcaaa 23654053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 28292024 - 28291945
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||| | |||||||| |||||  ||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  28292024 ctcattctacattctttcctaatcattcttagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 28291945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 19672294 - 19672380
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| ||||  ||||||||| ||||||||||||||||||| |||||||    
T  19672294 gttcaagctcaatctaaaaacttgcctaatcattattatacatattcaaacactcaaaatcatctaaggttcaacttaagggtcaaa 19672380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 18786537 - 18786451
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||| ||| ||||  | ||||| ||||||||||||||||| ||||||| ||||||||||| |||||||    
T  18786537 gttcaatctcaatctaaaaacttgcctaatcaataatatacgtgttcaggcactcaaaatcatctaaagttcaacttaagggtcaaa 18786451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 23005193 - 23005263
Alignment:
Q  127 ccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    |||||||||| |||| || |||| ||| ||| |||||  ||||||||||||||||||||||||||||||||    
T  23005193 ccaagttcaatctcaatcaaaaaacttgcctaatcattcttatacatgttcaggcactcaaaaacatctaa 23005263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 23207746 - 23207824
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| |||||||||||||||||||||| || ||||||| |||| ||||||    
T  23207746 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcataatcatctaaagttcgacttaa 23207824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 39827668 - 39827602
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||| ||| ||||||| ||||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  39827668 gttcaacttcaatctaaaaactttcctaatcattattatacatattcaggcactcaaaatcatctaa 39827602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 37835 - 37770
Alignment:
Q  152 tttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| ||||| |||| |||||||||||||||||||| |||||||||||| ||| ||| ||||||    
T  37835 tttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttccactcaaaagtcaaa 37770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 20309480 - 20309572
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||| | ||||||||||||| ||| |||||||||||| ||| ||||||    
T  20309480 ttccaggttcaatctcatcctacattctttcctaatcattattagacatatccaggcactcaaaagcatataaggttcaactcaaaagtcaaa 20309572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 22740654 - 22740615
Alignment:
Q  167 tatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  22740654 tatacatcttcaggcactcaaaaacatctaaggttcaact 22740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 22758409 - 22758370
Alignment:
Q  167 tatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  22758409 tatacatcttcaggcactcaaaaacatctaaggttcaact 22758370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 20519845 - 20519767
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||||||||||||||||  | ||||||| |||| ||||||    
T  20519845 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaggatcatctaaagttcgacttaa 20519767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 22412788 - 22412710
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| || ||||||||||||||||||| || ||||||| |||| ||||||    
T  22412788 gttcaatctcaatctaaaaacttgcctaatcattatcatacatgttcaggcactcagaatcatctaaagttcgacttaa 22412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 20520026 - 20519957
Alignment:
Q  24 cctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||| | ||||||||||| ||||  |||||||||||| |||||||| ||| ||||||| ||||||    
T  20520026 cctaaacaaggtattctgtaactaggcaactcgcgaggcgagagcctctacacgctatggcgacttcagg 20519957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 22412953 - 22412900
Alignment:
Q  40 tgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||||||  || ||||||||| |||||||||||| ||||||||||||||    
T  22412953 tgtaactgggcaactcacgaggcgagagcctctactcgctatggcgagttcagg 22412900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23005015 - 23005105
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||||||||||||   ||||  ||||| | |||||| |||||||||| ||||||||||||   |||||| ||| ||||||||||||||    
T  23005015 cgtgcgacaaagatcgcaa--aaccctaacaaggtattctgaaactgggcagctcgcgaggcgagccactctacccgctatggcgagttcagg 23005105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 22798809 - 22798770
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  22798809 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 22798770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 31756233 - 31756268
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagtt 89  Q
    |||||||||||| |||||||||||||||||||||||    
T  31756233 tcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 206
Target Start/End: Complemental strand, 44369985 - 44369954
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||||||||||||||||||||||||||||||    
T  44369985 ttcaggcactcaaaaacatctaaggttcaact 44369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 45677838 - 45677799
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  45677838 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 45677799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 7377 - 7319
Alignment:
Q  159 atcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| ||||||| |||||||||||||| || ||||||| | ||||||||| |||||||    
T  7377 atcattattatacttgttcaggcactcagaatcatctaaagatcaacttaagggtcaaa 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 23791592 - 23791629
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  23791592 tcgcgaggcgagagcctctactcgcgatggcgagttca 23791629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 37922 - 37882
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  37922 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 37882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 23286176 - 23286216
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  23286176 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 23286216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 25109364 - 25109436
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactca-aaaacatctaaggttcaacttaa 209  Q
    |||| ||||||| ||| ||| ||||| ||||||||||||||| |||||| ||| ||||||| |||| ||||||    
T  25109364 ctcaatctaaaaacttgcctaatcattattatacatgttcagtcactcagaaatcatctaaagttcgacttaa 25109436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 40621888 - 40621852
Alignment:
Q  181 cactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  40621888 cactcaaaaacatctaaggttcaactcaaaagtcaaa 40621852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 28667 - 28418
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||        |||||||||||| |||||| ||||||||||||||||||||| ||  |    
T  28667 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagtt 28568  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||  ||||||||||| ||||   | |||||| ||||||||  |||||||||| ||||| |||| |||||||||||||||||||| |||||||||     
T  28567 cacaaaat-ttcattctaaagtcttcgtaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaagga 28469  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||| ||||||||||||||||||||||| || |||||    
T  28468 tcaactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctc 28418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 99; Significance: 6e-49; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 130170 - 130419
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||| |  || |||||||||||| |||||| |||||||||||||||| ||||| || |    
T  130170 cgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggcgagtttaggtgtaatt 130269  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||||| |||||| |||   ||||| |||||| |||| |||| ||||||| || ||||| | || ||||||||||||||||||||||||| ||||     
T  130270 c-ccaaaaatccattcttaaactattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacatcaaagga 130368  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  130369 tcaactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctc 130419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 60548 - 60479
Alignment:
Q  24 cctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||| | |||||||||||||| |  |||||||||||| |||||||||||| ||||||||||||||    
T  60548 cctaaacaatgtattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 60367 - 60289
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| |||||||||||||||||||||| || ||||||| |||| ||||||    
T  60367 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcatctaaagttcgacttaa 60289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 10792 - 10998
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||| |||||||||||||||||| ||| ||||| || |||| || |  |||||||||||| |||||||||||| |||||||||||||||| ||||    
T  10792 cgtgcgacagagatcgcatttaacctaa-caaggcattttggaactaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaact 10890  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || |||| ||||||||| |||   ||||| |||||| |||| ||||  ||||||||| ||||| |||| ||||||||||||||||||||||||||||| |    
T  10891 cacaaaa-attcattcttaaactattccaggttcaatctcagtctaggatctttcctaatcattattacacatgttcaggcactcaaaaacatctaagat 10989  T
Q  201 tcaacttaa 209  Q
    |||||||||    
T  10990 tcaacttaa 10998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 6800 - 7048
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||| | || ||||||||| ||||||||| ||||||||||||||||||||||  |||||    
T  6800 gtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgccatggcgagttcaggtataactc 6899  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
      | ||  ||| |||| |||   ||||| |||||| |||| |||  |||||||||| || || |||| |||||| ||||||||| |||||||| |||| |    
T  6900 ccacaagtttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaattattattagacatgtccaggcactc-aaaacatcaaaggat 6998  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  6999 caactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctc 7048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 8786 - 8824
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  8786 tcgcgaggcgagggcctctactcgctatggcgagttcag 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 8949 - 9023
Alignment:
Q  143 tctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||| ||| |||  |||| ||||||||||||||||||||||||| | ||||| | ||||||||| |||||||    
T  8949 tctaaaaacttgcctagtcattattatacatgttcaggcactcaaaatcttctaaagatcaacttaagggtcaaa 9023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 2500 - 2253
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactc 101  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| | || |||||||||| | |||||||||||||||||||||||||||||  |||||    
T  2500 gtgcgacaaagatcgcatttatcctaaacaaggcattctgtaactagtcaattcgcgaggcaatggcctctactcgccatggcgagttcaggtataactc 2401  T
Q  102 ataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggtt 201  Q
       | || | | |||| || |   |||| |||||| |||| |||  |||||||||| ||||| |||| |||||||||||||||||||||||| ||||| |    
T  2400 -ccacaagtacgttcttaact-aatccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatttaaggat 2303  T
Q  202 caacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    ||||| ||| ||| |||||||||||| |||||||||||||| || |||||    
T  2302 caactcaaaagtcaaaattacgaaatttggatagctctctggtcatgctc 2253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 9340 - 9554
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| ||||||||||||||||  ||| ||||||||||| |||| || |||||||||||| |||||||||||||||||||||||||||| ||  |    
T  9340 cgtgcgacaaggatcgcatttaacctag-caaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagtt 9438  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    ||  |||||||||||||||| |||||||| || ||| |||| |||| | |||||||| ||| | |||| || ||||||||||||||||| |||||||||     
T  9439 ca-caaaaattcattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatctaaggg 9537  T
Q  201 tcaacttaaaggtcaaa 217  Q
    ||| || ||| ||||||    
T  9538 tcatctcaaaagtcaaa 9554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 86; Significance: 3e-41; HSPs: 7)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 90 - 250
Target Start/End: Original strand, 62913 - 63073
Alignment:
Q  90 caggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaa 189  Q
    ||||||||||||| |||| |||||||||||||| |||||| |||||| ||||||||  |||||||||| ||||| |||| ||||||||| ||||||||||    
T  62913 caggtgcaactcacaaaa-attcattctaaaatatttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcatgcactcaaaa 63011  T
Q  190 acatctaaggttcaacttaaaggtcaaa-ttacgaaatctggatagctctctgctcctgctc 250  Q
    |||||||||| |||||| ||| |||||| |||||||||||||||||||||||| || |||||    
T  63012 acatctaaggatcaactcaaaagtcaaatttacgaaatctggatagctctctggtcatgctc 63073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 124900 - 125060
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  ||||||||| |||||||||| ||||   ||||| ||| | ||||    
T  124900 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttc---ctcatcctacattctt 124996  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  124997 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 125060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 175202 - 175254
Alignment:
Q  177 caggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatct 228  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  175202 caggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatct 175254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 136046 - 135942
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    ||||||||||| | |||  || ||| |||||| |||| ||||||| ||| ||| ||||| |||||||||||||| ||||||| |  | |||||||||| |    
T  136046 aaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggttcga 135947  T
Q  205 cttaa 209  Q
    |||||    
T  135946 cttaa 135942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 136219 - 136132
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||| || |||||||||||| ||| |  |||| ||| ||| ||  |||||||||||| |||||||||||| ||||||||||||||    
T  136219 cgacaaaggtcacatttaacctaa-caaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 144754 - 144650
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    ||||||||||| | |||  || ||| |||||| |||| ||||||| ||| ||| ||||| |||||||||||||| ||||||| |  | |||||||||| |    
T  144754 aaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggttcga 144655  T
Q  205 cttaa 209  Q
    |||||    
T  144654 cttaa 144650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 144927 - 144840
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||| || |||||||||||| ||| |  |||| ||| ||| ||  |||||||||||| |||||||||||| ||||||||||||||    
T  144927 cgacaaaggtcacatttaacctaa-caaggtgttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 2159 - 1921
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||        |||||||||||| |||||| || |||||||||||||||||| ||  |    
T  2159 cgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgcttgccatggcgagttcaggttcagtt 2060  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || ||||  ||||||||||| |||||  | |||||| ||||||||  |||||||||| ||||| |||| ||||||||||  ||||||||||||||||||     
T  2059 cacaaaat-ttcattctaaagtctttttatgttcaatctcattctccaatctttcctaatcattattagacatgttcagtgactcaaaaacatctaagga 1961  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctc 239  Q
    |||||| ||| ||| ||| |||||||| ||||||||||||    
T  1960 tcaactcaaaagtcaaaaatacgaaatttggatagctctc 1921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 2660 - 2421
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||| |||| |||||  ||||||||| ||||||||||||        |||||||||||| |||||||||||||||||||||||||||| ||  |    
T  2660 cgtgcgacaaggatcacatttttcctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctactcgccatggcgagttcaggttcagtt 2561  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    || |||   ||||||||||||||||| || |||||| ||||||||  |||||||||| ||||| |||| ||||||||||| |||||||| |||||||||     
T  2560 cacaaat--ttcattctaaaatctttacaggttcaaactcattctccaatctttcctaatcattattagacatgttcaggtactcaaaagcatctaagga 2463  T
Q  201 tcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    ||| |  ||| ||| |||||| |||||||| |||||||||||    
T  2462 tcatcccaaaagtcaaaattatgaaatctgaatagctctctg 2421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 7912 - 7708
Alignment:
Q  3 tgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactca 102  Q
    |||||||||||||||||||||||||  ||| |||||||| |||  || |  |||||||||||| |||||||||||| |||||||||||||||| ||| |     
T  7912 tgcgacaaagatcgcatttaacctag-caaggcattctggaacaaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaacccc 7814  T
Q  103 taaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
     ||||| |||||||| |||   ||| | |||||| |||| ||||  ||||||||| ||||| |||| |||||||||| ||||||||||||||||||||||    
T  7813 caaaaa-ttcattcttaaactattctaggttcaatctcagtctaggatctttcctaatcattattacacatgttcagacactcaaaaacatctaaggttc 7715  T
Q  203 aacttaa 209  Q
    |||||||    
T  7714 aacttaa 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 17096 - 17292
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||||||||||||||||||   | || | |||  || |||||||||||| |||| |||||| ||||||||| | ||||    
T  17096 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattc-tcaaagttttattctaaaatctatccaggttcaatctcattctacattctt 17194  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||| |||| ||||||| |||||||||||||| || |||||    
T  17195 tcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatttggatagctctctggtcatgctc 17292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 16405 - 16220
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||||||||||||||||||   | |   |||   ||||||| |||||||||||| |||||| ||||||||||| ||||    
T  16405 tcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattctaaattctt 16306  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctct 238  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||| |||| ||||||||| | |||||||    
T  16305 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatcttgctagctct 16220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1933 - 1721
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||||||   | ||||||||| ||||||||||||||||    |||||||||||| |||||| ||||||||||||| ||||||| ||  |    
T  1933 cgtgcgacaaagatcgcaaa-atcctaaacaa-gcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaattcaggt-cagat 1837  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
        |||  |||||||||||||||||||| |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||| |||||||||||||     
T  1836 ttccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactc-aaaacatctaagga 1738  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  1737 tcaactcaaaagtcaaa 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 251
Target Start/End: Original strand, 101714 - 101907
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcc 156  Q
    |||||| || |||||| |||||||||||||||||||||  |  ||| ||||  ||||||||||| ||| |||| |||||| ||||||||  |||||||||    
T  101714 cgaggcaagagcctctgctcgccatggcgagttcaggtcaagttcacaaaa--ttcattctaaagtctctccaggttcaatctcattctccaatctttcc 101811  T
Q  157 ttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggt-caaattacgaaatctggatagctctctgctcctgctca 251  Q
    | ||||| |||| |||||||||||||||||||||| ||||||| |||||| ||| ||  ||||||||||||||| | ||||||||| || ||||||    
T  101812 taatcattattagacatgttcaggcactcaaaaacttctaaggatcaactcaaaagtaaaaattacgaaatctgaaaagctctctggtcatgctca 101907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 40030 - 39937
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    ||||| ||||||||||||||||||||||| || ||||| ||||||| |  || |||||||||||| ||||||||| |||||||| |||||||||    
T  40030 cgtgcaacaaagatcgcatttaacctaaataaggcattttgtaactagttagctcgcgaggcgagagcctctacttgccatggcaagttcaggt 39937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 39696 - 39627
Alignment:
Q  173 tgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    ||||||||||||| ||||||||||||| |||||| ||| ||| |||||| ||||||||||||||||||||    
T  39696 tgttcaggcactcgaaaacatctaaggatcaactcaaaagtcaaaattatgaaatctggatagctctctg 39627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 100639 - 100683
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaac 45  Q
    |||||||||||||||||||||||| || |||| ||||| ||||||    
T  100639 cgtgcgacaaagatcgcatttaacttagacaaggcattttgtaac 100683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 43589 - 43438
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||| |||||||||| |||||| |||||  ||||| | |||||| |||   ||||| |||||| |||| |||| ||||||    
T  43589 tcgcgaggcgagagcctctactcgtcatggcgagtacaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaatctcaatctagaatctt 43491  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    | || ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  43490 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 43438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 47509 - 47358
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||| |||||| ||| |||||| |||||  ||||| | |||||| |||   ||||| |||||| |||| |||| ||||||    
T  47509 tcgcgaggcgagagcctctactcgtcatggctagtacaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaatctcaatctagaatctt 47411  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    | || ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  47410 ttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaact 47358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 32764 - 32577
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||| | |||||| |||||  |||||||||  ||||||||||| ||||| ||||||||||||||||| || |||||| ||||||||  | || |    
T  32764 tcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaa-ttcattctaaaatctttacaggttcaatctcattctccagtcct 32666  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |||| ||||| |||| |||||||||| ||||||||| |||||||||||| ||| ||| ||| |||| ||||||||| |  |||||||||    
T  32665 tcctaatcattattagacatgttcagacactcaaaagcatctaaggttcgactcaaaagtcaaaatcacgaaatcttgcaagctctctg 32577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 46241 - 46428
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||| | |||||| |||||  |||||||||  ||||||||||| |||| |||||||||||||||||| || |||||| ||||||||  | || |    
T  46241 tcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaa-attcattctaaaatctttacaggttcaatctcattctccagtcct 46339  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |||| ||||| |||| |||||||||| ||||||||| |||||||||||| ||| ||| ||| |||| ||||||||| |  |||||||||    
T  46340 tcctaatcattattagacatgttcagacactcaaaagcatctaaggttcgactcaaaagtcaaaatcacgaaatcttgcaagctctctg 46428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 16461 - 16537
Alignment:
Q  113 attctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaa 189  Q
    |||||| |||||||||| |||||| ||| | ||| | |||||||| ||||| |||| ||||||||||||||||||||    
T  16461 attctacaatctttccaggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcactcaaaa 16537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 8151 - 7937
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||      | |||||||||||| |||||| ||||||||||||||||| | |  |  |    
T  8151 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacactagtgctcgcgaggcgagagcctctgctcgccatggcgagttctgttagat-t 8053  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  ||||||||||  |||||||| |||||| ||||| ||| | |||||||| ||||  |||| |||||||||||||||||||  ||||||||||    
T  8052 ctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggt 7954  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  7953 tcaactcaaaagtcaaa 7937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 53200 - 53114
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||    
T  53200 gttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagttcaacttaagggtcaaa 53114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 53352 - 53314
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  53352 tcgcgaggcgagggcctctactcgctatggcgagttcag 53314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 10289 - 10186
Alignment:
Q  139 tcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctc 237  Q
    |||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||  ||||||||    
T  10289 tcattctaaaatctttactaatcattattagacatgttcaggcactcaaaaacatctaaggttcatctcaaaggtcaaaattacgaaatcatgatagctc 10190  T
Q  238 tctg 241  Q
    ||||    
T  10189 tctg 10186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 10397 - 10274
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||| |||||||||||||||||||||| ||| ||| | |||||| || ||  |||||||||||| ||||||||||||  ||||||||||||||| ||||    
T  10397 cgtgcaacaaagatcgcatttaacctaa-caaggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgagttcaggtgtaact 10299  T
Q  101 cataaaaaattcattctaaaatcttt 126  Q
    ||  ||||||||||||||||||||||    
T  10298 ca-caaaaattcattctaaaatcttt 10274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 1005 - 1057
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||||||  ||||||||| ||||||||||||||||| ||| ||||||    
T  1005 attagacatgttctagcactcaaagacatctaaggttcaactcaaaagtcaaa 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 20718 - 20881
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||    
T  20718 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatctttccaggttcaatctcatcctacattctt 20817  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  20818 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 20881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 228
Target Start/End: Original strand, 39076 - 39249
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  ||||||| |||||||||||| |||||| ||||||||| | ||||    
T  39076 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcc-acaagtttcattc-aaaatctttccaggttcaatctcattctacattctt 39173  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatct 228  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| ||||||| || ||| ||||||||||||||    
T  39174 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaacttcaaagtcaaaattacgaaatct 39249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 25870 - 25708
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| |||||||||||||| ||  |    |||||||||||||| ||||||| || |||||| ||||| ||| | ||||    
T  25870 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt-cagatttccaaaaattcattctacaatcttttcaggttcaatctcatcctacattctt 25772  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  25771 tcctaatcattattagacatgttcaggcactcaaaaccatctaaggatcaactcaaaagtcaaa 25708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 206
Target Start/End: Complemental strand, 33299 - 33148
Alignment:
Q  55 cgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatcttt 154  Q
    ||||||||||| |||| | |||||| ||||||||||||||   |||   ||||  |||||||||||||||||||| |||||| ||||| ||| | |||||    
T  33299 cgcgaggcgagagcctttgctcgccgtggcgagttcaggtaagacttccaaaagtttcattctaaaatctttccaggttcaatctcatcctacattcttt 33200  T
Q  155 ccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||| ||||| |||| |||||| |||||||||| || ||||||||| ||||||    
T  33199 cctaatcattattagacatgtccaggcactcagaagcatctaaggatcaact 33148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 217
Target Start/End: Original strand, 2170 - 2329
Alignment:
Q  58 gaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcct 157  Q
    |||||||  ||||||||||||||||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||||||    
T  2170 gaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcct 2269  T
Q  158 tatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
     ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  2270 aatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 2329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 207376 - 207162
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||       | |||||||||||| |||||| ||||||||||||||||||| |   | |    
T  207376 cgtgcgacaaagatcgcatttaacctaaacaaagcattgtgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttcag-tcagatt 207278  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  ||||||||||  |||||||| |||||| ||||| ||| | ||| |||| ||||  |||| |||||||||||||||||||  ||||||||||    
T  207277 ctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattctctcctaatcaatattagacatgttcaggcactcaaaggcatctaaggt 207179  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  207178 tcaactcaaaagtcaaa 207162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 119280 - 119202
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| |||  || ||||| ||||||||| ||||||||||||||| ||||||| |||||||||||    
T  119280 gttcaatctcaatctaaaaacttgtctaatcattattatacatattcaggcactcaaaatcatctaatgttcaacttaa 119202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 52227 - 52390
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  ||||||||| |||||||||| |||||| ||||| ||| | ||||    
T  52227 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctt 52326  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  52327 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 52390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 167719 - 167621
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatct 228  Q
    |||||| ||||| ||||| |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||    
T  167719 gttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatct 167621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 167785 - 167745
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  167785 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 167745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 5979 - 6093
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacga 223  Q
    |||||||||||| |||| |||  |||||||||| ||||| |||| || ||||||||||||||||||||||||||| |||||| ||| ||| |||||||||    
T  5979 ttccaagttcaatctcaatctccaatctttcctaatcattattagacctgttcaggcactcaaaaacatctaaggatcaactaaaaagtcaaaattacga 6078  T
Q  224 aatctggatagctct 238  Q
    |||||||||||||||    
T  6079 aatctggatagctct 6093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 220 - 382
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgc-aactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatct 152  Q
    ||||| |||||| ||||||||||||  ||||||||||||||   |||||| ||||  ||||||||||| |||||||| |||||| ||||| ||| | |||    
T  220 tcgcgtggcgagagcctctactcgctgtggcgagttcaggtcagaactca-aaaagtttcattctaaa-tctttccaggttcaatctcatcctacattct 317  T
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||||| ||| ||||||    
T  318 ttcctaatcattattagacatgttcaggcactcaaaaacatataaggatcaactcaaaagtcaaa 382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 250
Target Start/End: Original strand, 12228 - 12440
Alignment:
Q  37 ttctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaa 136  Q
    |||||||| ||||||  |||||||| ||| |||||||||||||||||||||||||||| ||  |   ||||| |||||||| || |  | ||| ||||||    
T  12228 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggt-cagtttccaaaaagttcattcttaattaat-ccaggttcaa 12325  T
Q  137 cctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaatt-acgaaatctggatagc 235  Q
     ||||||||| | |||||||| ||||| |||| |||| ||||| ||||||||| ||||||||| |||| | ||| |||||| | ||||||| ||||||||    
T  12326 tctcattctacattctttcctaatcattattaaacatattcagacactcaaaagcatctaaggatcaattcaaaagtcaaaatcacgaaatttggatagc 12425  T
Q  236 tctctgctcctgctc 250  Q
    |||||| || |||||    
T  12426 tctctggtcatgctc 12440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 228
Target Start/End: Complemental strand, 20228 - 20057
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttc 155  Q
    |||||||||| |||||||||||||||||||||||||||| || ||   ||||| |||||||| || |  | ||| |||||| ||||||||| | ||||||    
T  20228 gcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattcttaattaat-ccaggttcaatctcattctacattctttc 20131  T
Q  156 cttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaatt-acgaaatct 228  Q
    ||  |||| |||| ||||||||||| |||||||| ||||||||| |||||| ||| |||||||| |||||||||    
T  20130 ctactcattattaaacatgttcaggaactcaaaagcatctaaggatcaactcaaaagtcaaattcacgaaatct 20057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 65479 - 65437
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  65479 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 65437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 658 - 845
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||||||||||  ||||||||||| |   | ||  ||||  ||||||||||| |||||| | |||||| ||||||||| | ||||    
T  658 tcgcgaggcgagagcctctactcgccgcggcgagttcagttcagattcc-aaaagtttcattctaaattctttctaggttcaatctcattctacattctt 756  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    | || ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||| |||| |||||||||  | |||||||||    
T  757 ttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatcttaaaagctctctg 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 3785 - 3948
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  || |||||| |||| ||||| |||||| ||||| ||| | ||||    
T  3785 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcctacattctt 3884  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||| ||||||||| ||||||| | |||||| ||| ||||||    
T  3885 tcctaatcattattagacatgttcagacactcaaaagcatctaaagatcaactcaaaagtcaaa 3948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 4823 - 4986
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaa-tctttccaagttcaacctcattctaaaatct 152  Q
    |||||| ||||| |||||| |||||||||||||||||||||   | ||  |||   |||||||||||| |||||||| |||||| ||||||||| | |||    
T  4823 tcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagt-ttcattctaaaaatctttccaggttcaatctcattctacattct 4921  T
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    || || ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  4922 tttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 4986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 12405 - 12568
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaa-tctttccaagttcaacctcattctaaaatct 152  Q
    |||||| ||||| |||||| |||||||||||||||||||||   | ||  |||   |||||||||||| |||||||| |||||| ||||||||| | |||    
T  12405 tcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagt-ttcattctaaaaatctttccaggttcaatctcattctacattct 12503  T
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    || || ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  12504 tttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 12568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 22357 - 22520
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaa-tctttccaagttcaacctcattctaaaatct 152  Q
    |||||| ||||| |||||| |||||||||||||||||||||   | ||  |||   |||||||||||| |||||||| |||||| ||||||||| | |||    
T  22357 tcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagt-ttcattctaaaaatctttccaggttcaatctcattctacattct 22455  T
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    || || ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  22456 tttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 22520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 18326 - 18287
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  18326 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 18287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 17020 - 16869
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| ||| || ||||||||||||||   | |   ||||  ||||||||||| |||||||| |||||| ||||||||| | ||||    
T  17020 tcgcgaggcgagagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattctacattctt 16922  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| ||||||    
T  16921 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaact 16869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 79096 - 78993
Alignment:
Q  126 tccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtca-aattacgaa 224  Q
    |||| |||||| ||||||||| | || ||||| ||||| |||| ||||||||| |||||||||| |||||||||||||||| ||| |||| |||||| ||    
T  79096 tccaggttcaatctcattctacattccttcctaatcattattaaacatgttcatgcactcaaaagcatctaaggttcaactcaaaagtcagaattacaaa 78997  T
Q  225 atct 228  Q
    ||||    
T  78996 atct 78993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 79185 - 79107
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccat 81  Q
    ||||||||||||||||||   | ||||||||| || |||||||| ||||||  |||||||||||| |||||||||||||||    
T  79185 cgtgcgacaaagatcgcaaa-atcctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccat 79107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 15420 - 15258
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| ||||| |||||||||||||||   | ||  |||   ||||||||||||||| ||||  ||||| ||||||||| | ||||    
T  15420 tcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagt-ttcattctaaaatctatccagattcaatctcattctacattctt 15322  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||| ||||||||||||||| ||||||||| |||||| ||| ||||||    
T  15321 tcctaatcattattaaacatattcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 15258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 13036 - 13122
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| ||| ||| ||||| | |||||||| |||||||||||||| ||||||| ||||||||||| |||||||    
T  13036 gttcaatctcaatctaaaaacttgcctaatcattaatatacatggtcaggcactcaaaatcatctaaagttcaacttaagggtcaaa 13122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 13407 - 13570
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | ||  | ||  ||||||||| ||||||| ||  ||||| ||||| ||| | ||||    
T  13407 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatcttttcagattcaatctcatcctacattctt 13506  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  13507 tcctaatcataattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 13570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 34437 - 34598
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| ||||||||||||||||| |||   | ||   |||  ||||||||||  ||||| || |||||| ||||||||| | ||||    
T  34437 tcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctccaaattttcattctaag-tcttttcaggttcaatctcattctacattctt 34534  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  34535 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 34598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 789 - 691
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatct 228  Q
    |||||| ||||| ||||| |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||    
T  789 gttcaatctcatcctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatct 691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 855 - 815
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  855 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 2825 - 2703
Alignment:
Q  120 aatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaat 218  Q
    |||||||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||    
T  2825 aatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaat 2726  T
Q  219 tacgaaatctggatagctctctg 241  Q
     ||||||||| |  |||||||||    
T  2725 cacgaaatcttgcaagctctctg 2703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 2294 - 2099
Alignment:
Q  8 caaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaa 107  Q
    ||||||||||||| |||||||| || ||||||||||||      | |||||||||||| |||||| ||||||||||||||||| |||   | ||   |||    
T  2294 caaagatcgcattcaacctaaa-aaggcattctgtaacacacacgctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctctaaa 2197  T
Q  108 aattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
      ||||||||||  ||||| || |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  2196 ttttcattctaag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaact 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7932 - 7841
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||||||||||||| ||||| ||| ||||| ||||||||||||  |||||||||||| |||| ||||||| ||||||||||||||    
T  7932 cgtgcgacaaagatcgcatttaccctaa-caaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgagttcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 29132 - 28935
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    |||||||||||||||| |||||||| || ||||||||||||      | || ||||||||| |||||| ||||||||||| ||||| |||   | ||       
T  29132 cgacaaagatcgcattcaacctaaa-aaggcattctgtaacacaaacgctcacgaggcgagagcctctgctcgccatggctagttc-ggtcagattctct 29035  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||  ||||||||||  |||||| | |||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||    
T  29034 aaattttcattctaag-tctttctaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 28936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 10178 - 10388
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    |||||||||||||||||||||||||||| ||||||||||||      | |||||||||||| |||||| |||||||||||||||||| ||   | ||       
T  10178 cgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttca-gtcagattctcc 10276  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||  ||| |||| || |||||||| |||||| ||||| ||| | |||||||| ||||  | || ||||||| |||||||||||  ||||||||||||||    
T  10277 aaagtttccttct-aagtctttccaggttcaatctcatcctacattctttcctaatcaataatagacatgtttaggcactcaaaggcatctaaggttcaa 10375  T
Q  205 cttaaaggtcaaa 217  Q
    || ||| ||||||    
T  10376 ctcaaaagtcaaa 10388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 17758 - 17651
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| ||||| |||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||||| |||| ||    
T  17758 ttcattctacaatctatccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggtttaactcaa 17659  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  17658 aagtcaaa 17651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 18708 - 18601
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| |||||||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| ||||||||| ||| || ||    
T  18708 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcatctcaa 18609  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  18608 aagtcaaa 18601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 250
Target Start/End: Original strand, 23256 - 23394
Alignment:
Q  113 attctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaagg 212  Q
    |||||| ||||||||||  | ||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||  ||||||||| |||||| ||| |    
T  23256 attctacaatctttccagatccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggatcaactcaaaag 23355  T
Q  213 tc-aaattacgaaatctggatagctctctgctcctgctc 250  Q
    || |||||||||||| ||||||||| |||| || |||||    
T  23356 tcaaaattacgaaatttggatagctatctggtcatgctc 23394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 5924 - 5775
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttcc 156  Q
    ||||||||| |||||| |||||| |||| |||||||||   | ||    ||| ||||||| | |||||| ||| |||||| ||||| ||| |||||||||    
T  5924 cgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccgcaaatttcattcaataatcttcccaggttcaatctcatcctacaatctttcc 5825  T
Q  157 ttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    | ||||| |||| |||||||||||||||||||| ||||||||| ||||||    
T  5824 taatcattattagacatgttcaggcactcaaaagcatctaaggatcaact 5775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 318 - 415
Alignment:
Q  132 ttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatct 228  Q
    ||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||    
T  318 ttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatct 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 5094 - 5191
Alignment:
Q  132 ttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatct 228  Q
    ||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||    
T  5094 ttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatct 5191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 253 - 291
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  253 gcgaggcgagagcctctgctcgccatggcgagttcaggt 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 5029 - 5067
Alignment:
Q  56 gcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  5029 gcgaggcgagagcctctgctcgccatggcgagttcaggt 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 15954 - 15866
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||||||||   | ||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||| ||||||||||||    
T  15954 gtgcgacaaagatcgcaaa-atcctaaacaaggcattctgtaactgggcaactcgcgaggcgagggcctatactcgctatggcgagttca 15866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 3158 - 3233
Alignment:
Q  127 ccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
    |||||||||| |||| ||||||| ||| ||| ||||| ||| ||||| ||||||||||||||| ||||||||||||    
T  3158 ccaagttcaatctcaatctaaaaacttgcctaatcattattgtacatattcaggcactcaaaatcatctaaggttc 3233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13395 - 13482
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagtt 89  Q
    ||||||||||||||||||   | ||||||||| ||||||||||||| ||||  ||  ||||||||||||| ||||||| ||||||||||    
T  13395 cgtgcgacaaagatcgcaaa-atcctaaacaaggcattctgtaactaggcaactcatgaggcgagggcctatactcgctatggcgagtt 13482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 13573 - 13677
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||||| |||||| |||  || ||| |||||| |||| ||||||| ||| ||| ||||| |||||||||||||||||||| | || ||||||| |||| |    
T  13573 aaaaatccattcttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcacttagaatcatctaaagttcga 13672  T
Q  205 cttaa 209  Q
    |||||    
T  13673 cttaa 13677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 206
Target Start/End: Original strand, 20428 - 20579
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgc-aactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatct 152  Q
    |||||||||||| |||||| |||| | ||||||| ||||||   |||||  ||||  ||||||||||| |||||||| |||||| || |||||| | |||    
T  20428 tcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactcc-aaaagtttcattctaaa-tctttccaggttcaatcttattctacattct 20525  T
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||||||| ||||||    
T  20526 ttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaact 20579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 206
Target Start/End: Original strand, 4889 - 4990
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||| ||||||||||||||||| || |||||| ||||||||| |||||| |||  |||| | || ||||||| |||||||||||| ||||||||||||||    
T  4889 aaaagttcattctaaaatcttttcaggttcaatctcattctacaatcttccctagtcattaatagacatgtttaggcactcaaaagcatctaaggttcaa 4988  T
Q  205 ct 206  Q
    ||    
T  4989 ct 4990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 768 - 656
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||| ||||||||| ||||||| ||  ||||| ||||||||| | |||||||| ||||| |||| |||||||||||||||||||| ||| ||||| ||||    
T  768 aaaagttcattctacaatcttttcagattcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatataaggatcaa 669  T
Q  205 cttaaaggtcaaa 217  Q
    ||  |||||||||    
T  668 ctcgaaggtcaaa 656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 13335 - 13239
Alignment:
Q  133 tcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatct 228  Q
    |||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||||    
T  13335 tcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatct 13239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 27397 - 27285
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||||| |||||| |||  || ||| |||||| ||||  |||||| ||| ||| ||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  27397 aaaaatccattcttaaaatttcccaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagttcaa 27298  T
Q  205 cttaaaggtcaaa 217  Q
    ||||| |||||||    
T  27297 cttaagggtcaaa 27285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 3856 - 3948
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| | ||  ||||||||||||||||||  |||||||||||||||| ||| ||||||    
T  3856 ttccaggttcaatctcatcctacattctttcctaatcattactagtcatgttcaggcactcaaagtcatctaaggttcaactcaaaagtcaaa 3948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 7920 - 8012
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| | ||  ||||||||||||||||||  |||||||||||||||| ||| ||||||    
T  7920 ttccaggttcaatctcatcctacattctttcctaatcattactagtcatgttcaggcactcaaagtcatctaaggttcaactcaaaagtcaaa 8012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 27523 - 27485
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  27523 tcgcgaggcgagggcctctactcgctatggcgagttcag 27485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 3796 - 3836
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    ||||||| |||| |||||| |||||||||||||||||||||    
T  3796 tcgcgagacgagagcctctgctcgccatggcgagttcaggt 3836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 7860 - 7900
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    ||||||| |||| |||||| |||||||||||||||||||||    
T  7860 tcgcgagacgagagcctctgctcgccatggcgagttcaggt 7900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 16679 - 16746
Alignment:
Q  150 tctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  16679 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaaaagtcaaa 16746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 292 - 383
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    |||||||||||||||||||||||||||||||| |||||||||||       | |||||||||||| |||||| |||||||||||||||||||    
T  292 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatggcgagttcag 383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 413 - 505
Alignment:
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||||| ||||| ||| | |||||||| ||||  |||| |||||||||||||||| ||  |||||||||||||| | ||| ||||||    
T  413 tttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactc-aaggcatctaaggttcaattcaaaagtcaaa 505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 8282 - 8176
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| |||||||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||| |||| |||||| ||    
T  8282 ttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatc-aaggatcaactcaa 8184  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  8183 aagtcaaa 8176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 217
Target Start/End: Original strand, 40228 - 40389
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| ||||||||||||| |||||||||||||| ||  |    |||| ||||||||| ||||| || | |||||| ||||| ||| | || |    
T  40228 tcgcgaggcgagagcctctactcgccgtggcgagttcaggt-cagatttccaaaagttcattctacaatctgtc-aggttcaatctcatcctacattcct 40325  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| | || |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  40326 tcctaatcattaataaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 40389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19740 - 19649
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||| || |||||||||||| ||| |  |||||||||||||||  || ||||||||| |||||||||| | ||||||||||||||    
T  19740 cgtgcgacaaaggtcacatttaacctaa-caaggtgttctgtaactgggcaactcacgaggcgagagcctctactccctatggcgagttcagg 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 40227 - 40334
Alignment:
Q  110 ttcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||||| |||||||||| |||||| ||||| ||  | |||||||| ||||| |||| |||||||||||||||||||| |||||| || |||||| ||    
T  40227 ttcattctacaatctttccaggttcaatctcatcctccattctttcctaatcattattagacatgttcaggcactcaaaagcatctacggatcaactcaa 40326  T
Q  210 aggtcaaa 217  Q
    | ||||||    
T  40327 aagtcaaa 40334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 39680 - 39574
Alignment:
Q  111 tcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaa 210  Q
    |||||||| | |||||||| |||||| ||||||||| | |||||||| ||||| | || ||||||||||| |||||||| ||||||||| |||||| |||    
T  39680 tcattctacattctttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcaggtactcaaaagcatctaaggatcaactcaaa 39581  T
Q  211 ggtcaaa 217  Q
     ||||||    
T  39580 agtcaaa 39574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 59307 - 59271
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttc 90  Q
    |||||||||||| |||||| |||||||||||||||||    
T  59307 tcgcgaggcgagagcctctgctcgccatggcgagttc 59271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 691 - 605
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||| |||||||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  691 gttcaatctcgttctacaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 8227 - 8146
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||| |||||||||||| ||| ||| ||||| ||| ||||||||||||| |||| ||||||| |||||| ||||    
T  8227 ttccaagttcaatctcattctaaaaccttgcctaatcattattgtacatgttcaggccctcataaacatccaaggttaaact 8146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 798 - 681
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacga 223  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||| ||||||||||||||| |||||||||||||||| ||| ||| ||| |||||    
T  798 ttccaggttcaatctcatcctacattctttcctaatcattattagacatattcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacga 699  T
Q  224 aatctggatagctctctg 241  Q
    ||||| ||  ||||||||    
T  698 aatcttgaatgctctctg 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 858 - 818
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  858 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 9691 - 9488
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||||||| |||||||||||||||| |||||||||||       | |||||||||||| |||||| ||||||||| |||||||| ||   | |    
T  9691 cgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgctcgcgaggcgagagcctctgctcgccatgacgagttca-gtcagatt 9593  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  |||||||| || ||||||||  ||||| ||||| ||| | |||||| | ||||  |||| |||||||||||||||||||  ||||||||||    
T  9592 ctccaaagtttcattct-aagtctttccagattcaatctcatcctacattctttcgtaatcaatattagacatgttcaggcactcaaaggcatctaaggt 9494  T
Q  201 tcaact 206  Q
    ||||||    
T  9493 tcaact 9488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 4877 - 4785
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||  |||||||||||||||| ||| ||||||    
T  4877 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaa 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 217
Target Start/End: Original strand, 8789 - 8953
Alignment:
Q  53 ttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatct 152  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||   | ||  | ||  | |||| || |||||||| | |||||| ||||| ||| | |||    
T  8789 ttcgcgaggcgagagcctctactggccgtggcgagttcaggtcagaatcccacaagttccattttacaatctttctaggttcaatctcatcctacattct 8888  T
Q  153 ttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| ||||  |||| |||| ||||||||||||||| ||||||||| |||||| ||| ||||||    
T  8889 ttcctaatcactattagacatattcaggcactcaaaagcatctaaggatcaactcaaaagtcaaa 8953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 10172 - 10080
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||||||||||||||||||| |||||||||||||| | ||| ||||||    
T  10172 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaattcaaaagtcaaa 10080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 13870 - 13962
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| |  ||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  13870 ttccaggttcaatctcatgctacatcctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 13962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 12381 - 12453
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||| |||||| |||| ||||||||||||||| ||||| ||||||||||||||| ||||||||| |||||||    
T  12381 ttccaggttcaatctcaatctaaaatctttcctaatcattattatacatgttcagacactcaaaatcatctaa 12453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 9122 - 9070
Alignment:
Q  176 tcaggcactcaaaaacatctaaggttcaacttaaaggtcaaat-tacgaaatc 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9122 tcaggcactcaaaaacatctaaggttcaacttaaaggtcaaatctacgaaatc 9070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 80189 - 79975
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    |||||||| ||||||||||||||||||||||| |||||||||||       | |||||||||||| |||||| ||||||||| |||||||| ||   | |    
T  80189 cgtgcgacgaagatcgcatttaacctaaacaaggcattctgtaatactattgctcgcgaggcgagagcctctgctcgccatgtcgagttca-gtcagatt 80091  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  |||||||| || |||||||| |||||| ||||| ||| | |||||||| ||||  |||| ||||||||||||||||||   ||| ||| ||    
T  80090 ctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaatggcatttaatgt 79992  T
Q  201 tcaacttaaaggtcaaa 217  Q
    |||||| ||| ||||||    
T  79991 tcaactcaaaagtcaaa 79975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 339756 - 339569
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||| ||||||||||| ||   | ||  ||||  ||||||||| |||||||||| |||||| ||||| ||| | || |    
T  339756 tcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaaaag-ttcattctacaatctttccaggttcaatctcatcctacattcat 339658  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatctggatagctctctg 241  Q
    |||| ||||| |||| |||  ||||||||||||||| ||| ||||| |||||| ||| ||| |||| ||||||||| |  |||||||||    
T  339657 tcctaatcattattagacaaattcaggcactcaaaagcatttaaggatcaactcaaaagtcaaaatcacgaaatcttgcaagctctctg 339569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 14038 - 14109
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  14038 ctcaatctaaaaacttacctaatcattattatacatattcaggcactcaaaatcatctaaggttcaacttaa 14109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 11259 - 11178
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| ||||||||||||||||||||  |||||||||||||||    
T  11259 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagaatctaaggttcaact 11178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 24107 - 23945
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctt 153  Q
    |||||||||||| |||||| |||||  ||||||||||||||   | ||  | ||  ||||||||| ||| |||||| |||||| ||||| ||| | | ||    
T  24107 tcgcgaggcgagagcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctacaat-tttccaggttcaatctcatcctacattttt 24009  T
Q  154 tccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||| |||| ||||||||||||||||||||  |||||||| |||||| ||| ||||||    
T  24008 tcctaatcattattagacatgttcaggcactcaaaagaatctaaggatcaactcaaaagtcaaa 23945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 34593 - 34565
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||||||||||||||||||||    
T  34593 aggcactcaaaaacatctaaggttcaact 34565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 80730 - 80808
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||||||||||||||||||| ||||||| |||| ||||||    
T  80730 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagttcgacttaa 80808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 128774 - 128735
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  128774 tcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 206
Target Start/End: Original strand, 15927 - 16125
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcata 104  Q
    ||||||||||||||||  ||||||| || ||||||||||||     || |||||||||||| |||||| ||||||||||||||||| |||   | ||       
T  15927 cgacaaagatcgcattccacctaaa-aaggcattctgtaacacaaaagctcgcgaggcgagagcctctgctcgccatggcgagttc-ggtcagattctct 16024  T
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    |||  |||||| | |  ||||| || |||||| ||||||||| | |||||||| ||||| |||| |||| ||||||||||||||| ||||||||| ||||    
T  16025 aaattttcattttgag-tcttttcaggttcaatctcattctacattctttcctaatcattattagacatattcaggcactcaaaagcatctaaggatcaa 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 1768 - 1827
Alignment:
Q  170 acatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatct 228  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  1768 acatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatct 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 18022 - 17908
Alignment:
Q  104 aaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttca 203  Q
    ||||||| |||| | ||| ||| ||| || ||| |||| ||||||| ||| ||| ||||| ||||||||| |||| ||||||||||  ||||||||||||    
T  18022 aaaaaatccatttttaaaccttcccaggtccaatctcaatctaaaaacttgcctaatcattattatacatattcatgcactcaaaattatctaaggttca 17923  T
Q  204 acttaaaggtcaaat 218  Q
    |||||| || |||||    
T  17922 acttaagggacaaat 17908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 18196 - 18159
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgt 42  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  18196 cgacaaagattgcatttaacctaaacaaggcattctgt 18159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 25567 - 25640
Alignment:
Q  124 tttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||||||||| |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| |||||||    
T  25567 tttccaagttcaatctcaatctaaaaacttgcctaatcattattatacattttcaggcactcaaaatcatctaa 25640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2074 - 2030
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaac 45  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  2074 cgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaac 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 2244 - 2316
Alignment:
Q  130 agttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttc 202  Q
    ||||||| ||||||||| |||||||||| ||||| | | | ||| ||||||||||||||||||||||||||||    
T  2244 agttcaatctcattctacaatctttcctaatcattagtgtgcatcttcaggcactcaaaaacatctaaggttc 2316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 5223 - 5315
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||| |||| |||||||||| |||||||||||||||| ||| ||||||    
T  5223 ttccaggttcaatctcatcctacattctttcctaatcattattagacatcttcatgcactcaaaagcatctaaggttcaactcaaaagtcaaa 5315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 5163 - 5203
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    ||||||||| || ||||||||||||| ||||||||||||||    
T  5163 tcgcgaggcaagagcctctactcgccgtggcgagttcaggt 5203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 12665 - 12452
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaact 100  Q
    ||||||||||  |||||||||||||||||||| |||||||||||       | | |||||||||| |||||| ||||||||||||||||||| |   | |    
T  12665 cgtgcgacaagaatcgcatttaacctaaacaa-gcattctgtaatactagtgcttgcgaggcgagagcctctgctcgccatggcgagttcag-tcagatt 12568  T
Q  101 cataaaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggt 200  Q
    |   |||  |||||||||   |||||||| |||||| ||||| ||| | |||||||| ||||  |||| |||||||||||||||||||  ||||||||||    
T  12567 ctccaaagtttcattctatg-tctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggt 12469  T
Q  201 tcaacttaaaggtcaaa 217  Q
    ||| || ||| ||||||    
T  12468 tcatctcaaaagtcaaa 12452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 217
Target Start/End: Complemental strand, 24502 - 24294
Alignment:
Q  7 acaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcataaa 106  Q
    |||| ||||||||||||||||||||   |||||||||||      | |||||||||||| |||||| |||||||||||||||||||   ||  | ||  |    
T  24502 acaaggatcgcatttaacctaaacatgacattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttcagt--cagattatcca 24405  T
Q  107 aaatt-cattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaac 205  Q
    || || ||||||||  |||||| | |||||| ||||| ||||| |||||||| ||||  |||| ||||||||||||||||||   ||||||||||| |||    
T  24404 aagtttcattctaag-tctttctaggttcaatctcatcctaaattctttcctaatcaatattagacatgttcaggcactcaagggcatctaaggttaaac 24306  T
Q  206 ttaaaggtcaaa 217  Q
    | ||| ||||||    
T  24305 tcaaaagtcaaa 24294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 15211 - 15119
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| |||| |||| || |||||||||||| |||||| ||||||||||||| ||||||    
T  15211 ttccaggttcaatctcatcctacattctttcctaatcattattagacatattaaggcactcaaaagcatctacggttcaacttaaaagtcaaa 15119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 7726 - 7765
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  7726 aggcactcaaaagcatctaaggttcaactcaaaggtcaaa 7765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 32966 - 32919
Alignment:
Q  170 acatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||| |||||| |||||||||||||||| ||| ||||||    
T  32966 acatgttcaggcattcaaaagcatctaaggttcaactcaaaagtcaaa 32919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 32439 - 32531
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| | | | ||||||||  |||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  32439 ttccaggttcaatctcatcccacattctttcctagtcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 32531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 29160 - 29240
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaat 218  Q
    |||| ||||||| ||| ||| ||||| |||||| || ||||||||||||||| ||||||||||||||||||| || |||||    
T  29160 ctcaatctaaaaacttgcctaatcattattatatatattcaggcactcaaaatcatctaaggttcaacttaagggacaaat 29240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 24529 - 24566
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  24529 tcgcgaggcgagcgcctctactcgctatggcgagttca 24566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 26855 - 26892
Alignment:
Q  4 gcgacaaagatcgcatttaacctaaacaaagcattctg 41  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  26855 gcgacaaagatcacatttaacctaaacaaggcattctg 26892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 35399 - 35436
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  35399 tcgcgaggcgagcgcctctactcgctatggcgagttca 35436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 21276 - 21368
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| || ||| ||||| ||| | |||||| | ||||| |||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  21276 ttccaggtacaatctcatcctacattctttcataatcattattagacatgttcaggcactaaaaaacatctaaggttcaactcaaaagtcaaa 21368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 24255 - 24171
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||| |||||| |||| ||||||| ||| ||| ||||| |||||| || ||||||||||||||| |||||||| ||||||||||    
T  24255 ttccaggttcaatctcaatctaaaagcttgcctaatcattattatatatattcaggcactcaaaatcatctaagcttcaacttaa 24171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24453 - 24362
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||||||||||||   ||||||||||||| |||||| || ||||||| ||||||||||||   |||||||||  ||||||||||||||    
T  24453 cgtgcgacaaagatcgcaaa-aacctaaacaaagtattctgcaattgggcagctcgcgaggcgagtcactctactcgttatggcgagttcagg 24362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 103338 - 103234
Alignment:
Q  105 aaaaattcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaa 204  Q
    ||||||||||| | |||  || ||| |||||| |||| ||||||| ||| ||| ||||| |||||||||||||||||||||| || | |||||||||| |    
T  103338 aaaaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcctctaaggttcga 103239  T
Q  205 cttaa 209  Q
    |||||    
T  103238 cttaa 103234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 103490 - 103403
Alignment:
Q  5 cgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||| || |||||||||||| ||| |  |||||||| ||| ||  ||| |||||||| |||||||||||| ||||||||||||||    
T  103490 cgacaaaggtcacatttaacctaa-caaggtgttctgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgagttcagg 103403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 35592 - 35521
Alignment:
Q  138 ctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||| ||||||| ||| ||| ||||| ||||||||| ||||||||||||||| ||| |||||||||||||||    
T  35592 ctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatttaaggttcaacttaa 35521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 13235 - 13313
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| || ||||||||||||||||||| ||||| |||| |||||||||||    
T  13235 gttcaatctcaatctaaaaacttgcctaatcattatcatacatgttcaggcactcataaacaactaaagttcaacttaa 13313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 8194 - 8290
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||| |||| ||||||| ||| ||| ||||| || ||||||||||||||||| | ||||| |||| ||||||||| |||||| |||||||||||||    
T  8194 gttcaatctcaatctaaaaacttgcctaatcattatcatacatgttcaggcacttagaaacaactaaagttcaactt-aaggtcaaaattacgaaatc 8290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13031 - 13075
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaac 45  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||    
T  13031 cgtgcgacaaagattgcatttaacctaaacaaggcattttgtaac 13075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 28928 - 29014
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| ||||||||| | |||||||| ||||| |||| ||||||||||| |||||||| ||||||||| || ||| ||| ||||||    
T  28928 gttcaatctcattctacattctttcctaatcattattagacatgttcaggaactcaaaagcatctaaggatctactcaaaagtcaaa 29014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 1432 - 1346
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| |||| ||||||| |||  || ||||| | ||||||||||||||||||||||| ||||| | ||||||||| | |||||||    
T  1432 gttcaatctcaatctaaaaacttgtctaatcattaatatacatgttcaggcactcaaaatcatctgaagttcaactttagggtcaaa 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 70221 - 70271
Alignment:
Q  167 tatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| ||||||    
T  70221 tatacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 70271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 332784 - 332862
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||||||| |||||  |||||||| ||||||||||||||| ||||||| | |||||||||    
T  332784 gttcaatctcaatctaaaaactttcctaatcattcttatacatattcaggcactcaaaatcatctaaagctcaacttaa 332862  T

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Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 26834 - 26887
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  26834 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 26887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 36077 - 36024
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  36077 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 36024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 36891 - 36944
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaatc 227  Q
    |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  36891 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 36944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1653 - 1562
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||||||||||| || ||| |||||||| ||| |  |||||||| ||||||  || ||||||||| |||||||||||| ||||||||||||||    
T  1653 cgtgcgacaaaggtcacatgtaacctaa-caaggtgttctgtaattgggcatctcacgaggcgagagcctctactcgctatggcgagttcagg 1562  T

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Target: scaffold0737; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 1438 - 1372
Alignment:
Q  143 tctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||||| ||| |||  |||| |||||||||||||||||||||| || ||||||| |||| ||||||    
T  1438 tctaaaaacttgcctactcattattatacatgttcaggcactcagaatcatctaaagttcgacttaa 1372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 1289 - 1381
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | |||||||| ||||| ||||   |||||||||||||||||  |||||||||||||||| ||| ||||||    
T  1289 ttccaggttcaatctcatcctacattctttcctaatcattattagtaatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaa 1381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 10967 - 10915
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| |||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  10967 attagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 10915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 47361 - 47465
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaa-attacga 223  Q
    ||||| |||||| ||||| ||| | || ||||| ||||| |||| |||| ||||| ||||||||| |||||||||||||||| ||| ||||| | |||||    
T  47361 ttccaggttcaatctcatcctacattcattcctaatcattattagacatattcagacactcaaaagcatctaaggttcaactcaaaagtcaacaatacga 47460  T
Q  224 aatct 228  Q
    |||||    
T  47461 aatct 47465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 227878 - 227942
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaa 189  Q
    ||||| |||||| |||| |||| |||||||||| ||||| |||||||||||| ||||||||||||    
T  227878 ttccaggttcaatctcaatctagaatctttcctaatcattattatacatgtttaggcactcaaaa 227942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 268120 - 268196
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaactt 207  Q
    |||||| |||| ||||||| ||| ||| ||||| |||||||||||||||||||| | || ||||||| |||||||||    
T  268120 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcacttagaatcatctaaagttcaactt 268196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 339 - 374
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagtt 89  Q
    ||||||||||||||||||||||||||||||||||||    
T  339 tcgcgaggcgagggcctctactcgccatggcgagtt 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 85810 - 85900
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcag 92  Q
    ||||||||||||||||||   | ||||||||| | |||||| |||||||||| |||||||||||||  |  ||||||| |||||||||||||    
T  85810 cgtgcgacaaagatcgcaaa-accctaaacaaggtattctgaaactgggcagctcgcgaggcgaggaacattactcgctatggcgagttcag 85900  T

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Target: scaffold1895 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 934 - 892
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  934 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 5995 - 5953
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| | ||||||||    
T  5995 ttcaggcactcaaaaacatctaaggttcaactcacaggtcaaa 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 6557 - 6471
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| ||||||||| | |||||||| ||||| |||| ||||||||||||||| |||  ||||||||| ||| || ||| ||||||    
T  6557 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactaaaaggcatctaaggatcatctcaaaagtcaaa 6471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 21492 - 21450
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  21492 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 21450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 29384 - 29342
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  29384 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaa 29342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 38765 - 38843
Alignment:
Q  131 gttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    |||||| |||| ||||||| ||| ||| ||||| ||||||||| |||| ||||||| || |||||||||||| ||||||    
T  38765 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcacgcactcagaatcatctaaggttcgacttaa 38843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 20418 - 20458
Alignment:
Q  177 caggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  20418 caggcactcaaaaacatctaaggttcaactcaaaagtcaaa 20458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 38635 - 38672
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  38635 tcgcgaggcgagagcctctactcgctatggcgagttca 38672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 8643 - 8601
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  8643 ttcagggactcaaaaacatctaaggttcaactcaaaggtcaaa 8601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 206197 - 206099
Alignment:
Q  111 tcattctaaaatctttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaa 209  Q
    ||||| |||||  |||||||||||||  ||| ||||||| ||| | | |||||  |||||||| ||||||||||||||| ||||||| |||| ||||||    
T  206197 tcattttaaaacttttccaagttcaatttcaatctaaaaacttgcttaatcattcttatacatattcaggcactcaaaatcatctaaagttcgacttaa 206099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 14552 - 14506
Alignment:
Q  2 gtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgg 48  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  14552 gtgcgaccaagatcgcatttatcctaaacaaggcattctgtaactgg 14506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 30428 - 30379
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtc-aaattacgaaat 226  Q
    |||||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  30428 aggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 30379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 2327 - 2419
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | || ||||| || || |||| ||| |||||||||||||||  |||||||||||||||| ||| ||||||    
T  2327 ttccaggttcaatctcatcctacattccttcctaattattattagacacgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaa 2419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 2267 - 2307
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  2267 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 2307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 6985 - 7077
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||| ||||| ||| | || ||||| || || |||| ||| |||||||||||||||  |||||||||||||||| ||| ||||||    
T  6985 ttccaggttcaatctcatcctacattccttcctaataattattagacacgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaa 7077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 6925 - 6965
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  6925 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 13586 - 13678
Alignment:
Q  125 ttccaagttcaacctcattctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||| |||||  ||||| ||| | |||||||| ||||| |||| |||| ||||||||||||||| ||| ||||| |||||| ||| ||||||    
T  13586 ttccaggttcagtctcatcctacattctttcctaatcattattagacattttcaggcactcaaaagcatataaggatcaactcaaaagtcaaa 13678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 13526 - 13566
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  13526 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 13566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 2312 - 2351
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  2312 aggcactcaaaagcatctaaggttcaactcaaaggtcaaa 2351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 1767 - 1728
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  1767 aggcactcaaaagcatctaaggttcaactcaaaggtcaaa 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 15837 - 15876
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  15837 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 15876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 6761 - 6722
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  6761 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 6722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 206
Target Start/End: Original strand, 27256 - 27287
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||||||||||||||||||||||||||||||    
T  27256 ttcaggcactcaaaaacatctaaggttcaact 27287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 206
Target Start/End: Original strand, 32867 - 32898
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaact 206  Q
    ||||||||||||||||||||||||||||||||    
T  32867 ttcaggcactcaaaaacatctaaggttcaact 32898  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 18676 - 18715
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  18676 aggcactcaaaaacatctaaggttcaactcaaaagtcaaa 18715  T

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Target: scaffold1403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 866 - 900
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagt 88  Q
    |||||||| ||||||||||||||||||||||||||    
T  866 tcgcgaggtgagggcctctactcgccatggcgagt 900  T

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Target: scaffold0297 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 10507 - 10465
Alignment:
Q  175 ttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||    
T  10507 ttcaagcactcaaaaacatctaaggttcaactcaaaagtcaaa 10465  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 55325 - 55271
Alignment:
Q  143 tctaaaatctttccttatcatcattatacatgttcaggcactcaaaaacatctaa 197  Q
    ||||||| ||| ||| |||||  |||||||||||||||||||||||| |||||||    
T  55325 tctaaaaacttgcctaatcattcttatacatgttcaggcactcaaaatcatctaa 55271  T

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Target: scaffold1765 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1347 - 1391
Alignment:
Q  1 cgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaact 46  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||||    
T  1347 cgtgtgacaaagatcgcatttaacct-aacaaggcattctgtaact 1391  T

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Target: scaffold0301 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 11974 - 11937
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  11974 tcgcgaggcgagcgcctctactcgctatggcgagttca 11937  T

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Target: scaffold0301; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 15126 - 15089
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  15126 tcgcgaggcgagcgcctctactcgctatggcgagttca 15089  T

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Target: scaffold0301; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 16374 - 16337
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  16374 tcgcgaggcgagcgcctctactcgctatggcgagttca 16337  T

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Target: scaffold0282 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 17980 - 17931
Alignment:
Q  44 actgggcagttcgcgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    |||| |||| |||||||||||||  |||||||||| ||||||||||||||    
T  17980 actgtgcagctcgcgaggcgaggcactctactcgctatggcgagttcagg 17931  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 209240 - 209277
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  209240 tcgcgaggcgagcgcctctactcgctatggcgagttca 209277  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 97322 - 97359
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  97322 tcgcgaggcgagagcctctactcgctatggcgagttca 97359  T

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Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 106600 - 106637
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttca 91  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  106600 tcgcgaggcgagagcctctactcgctatggcgagttca 106637  T

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Target: scaffold1351 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 326 - 362
Alignment:
Q  57 cgaggcgagggcctctactcgccatggcgagttcagg 93  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  326 cgaggcgagagcctctactcgctatggcgagttcagg 362  T

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Target: scaffold0327 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 689 - 741
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| |||| || |||||||||||| |||||||||||||||| ||| ||||||    
T  689 attaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaa 741  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 18136 - 18108
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||||||||||||||||||||    
T  18136 aggcactcaaaaacatctaaggttcaact 18108  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 39792 - 39832
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  39792 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 39832  T

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Target: scaffold0106 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 1701 - 1753
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| |||||||||||||| ||||| ||||||| |||||| ||||| ||||||    
T  1701 attagacatgttcaggcacgcaaaagcatctaacgttcaatttaaaagtcaaa 1753  T

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Target: scaffold0106; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 7678 - 7730
Alignment:
Q  165 attatacatgttcaggcactcaaaaacatctaaggttcaacttaaaggtcaaa 217  Q
    |||| |||||||||||||| ||||| ||||||| |||||| ||||| ||||||    
T  7678 attagacatgttcaggcacgcaaaagcatctaacgttcaatttaaaagtcaaa 7730  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 16032 - 16004
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||||||||||||||||||||    
T  16032 aggcactcaaaaacatctaaggttcaact 16004  T

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Target: scaffold0081 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 15107 - 15135
Alignment:
Q  178 aggcactcaaaaacatctaaggttcaact 206  Q
    |||||||||||||||||||||||||||||    
T  15107 aggcactcaaaaacatctaaggttcaact 15135  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 75020 - 74980
Alignment:
Q  54 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 94  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  75020 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 74980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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