View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0387_low_3 (Length: 309)
Name: NF0387_low_3
Description: NF0387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0387_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 25850629 - 25850781
Alignment:
| Q |
69 |
cagagatatttcgcacgacaaatgtagtaaccttttatttgacgnnnnnnnnntcctacaatctatggttgtcacccccatgttgaaaatattggctcca |
168 |
Q |
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| T |
25850629 |
cagagatattttgcacgacat-tgtagtaaccttttatttgacaaaaaaagaatcctacaatctatggttgtcacccccatgttgaaaatattggctcca |
25850727 |
T |
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| Q |
169 |
aatcaacaatatatatatgatggttgtcaccctcaatttcacgttaacatgtttct |
224 |
Q |
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||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25850728 |
aatca--aaaatatatatgatggttgtcaccctcaatttcacgttaacatgtttct |
25850781 |
T |
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