View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0395_low_8 (Length: 272)
Name: NF0395_low_8
Description: NF0395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0395_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 40758188 - 40758262
Alignment:
| Q |
49 |
atgatcagccaccatcatgaatacaatatgaatcagagagacatcagacatgagataaatgatcaaaccactgcc |
123 |
Q |
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| T |
40758188 |
atgatcagccaccatcatgaatataatatgaatcatagagacatcagacatgagatgaatgatcaaaccactgcc |
40758262 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 40758314 - 40758381
Alignment:
| Q |
175 |
taagcattgtgatattattgatgttgaaagaactgttatgctgatgttatttataccgaaagaataat |
242 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
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| T |
40758314 |
taagcattgtgatattattgatgttgaaagaattgttatgctgatgttatttatactgaaagaataat |
40758381 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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