View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0402_high_4 (Length: 262)
Name: NF0402_high_4
Description: NF0402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0402_high_4 |
 | |
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| [»] chr4 (6 HSPs) |
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| [»] chr8 (9 HSPs) |
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| [»] chr7 (13 HSPs) |
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| [»] chr5 (10 HSPs) |
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| [»] chr2 (6 HSPs) |
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| [»] chr6 (9 HSPs) |
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| [»] chr3 (5 HSPs) |
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| [»] chr1 (3 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
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| [»] scaffold0611 (1 HSPs) |
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| [»] scaffold0254 (1 HSPs) |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold0313 (2 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0141 (2 HSPs) |
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| [»] scaffold0049 (1 HSPs) |
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| [»] scaffold0015 (1 HSPs) |
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| [»] scaffold0529 (1 HSPs) |
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| [»] scaffold0010 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 16255127 - 16254886
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
16255127 |
acatcatcatcagcaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
16255028 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16255027 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctaagtaattacagtgaccataggtctccacatacttggaagacatct |
16254928 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16254927 |
caatatttttctgattctatcatgagtagaatatgcctttcc |
16254886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 6694112 - 6693871
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
6694112 |
acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
6694013 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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|
| T |
6694012 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
6693913 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6693912 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
6693871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 17151267 - 17151028
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
17151267 |
acatcatcatcagctactgatgaggtttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
17151168 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||| | ||||||||||||||| |
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|
| T |
17151167 |
ctcttagtgaaccaatgagatcttccaggttcatagattataaatctttggcctgagtaattgcattgaccataggtctccaaacacttggaagacatct |
17151068 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgccttt |
260 |
Q |
| |
|
| |||||||||||||| | |||||||||||||||||||| |
|
|
| T |
17151067 |
taatatttttctaattcaaacatgagtagaatatgccttt |
17151028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 36 - 255
Target Start/End: Original strand, 520375 - 520594
Alignment:
| Q |
36 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
135 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
520375 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
520474 |
T |
|
| Q |
136 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
235 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
520475 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
520574 |
T |
|
| Q |
236 |
tctatcatgagtagaatatg |
255 |
Q |
| |
|
||| |||||||| ||||||| |
|
|
| T |
520575 |
tctctcatgagtggaatatg |
520594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 7844905 - 7845146
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | ||| |||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7844905 |
acatcatcatcagctactaatgagctttgttgagatgctttcaatgcaagtgtctttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
7845004 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||||| ||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
7845005 |
ctctcaatgagccaatgagatcttctagattcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccatacacttggaagacatct |
7845104 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
| ||||||||| |||||||||| ||||||||| |||||||| |
|
|
| T |
7845105 |
taatatttttctgattctatcataagtagaataagcctttcc |
7845146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 26813688 - 26813600
Alignment:
| Q |
159 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagt |
247 |
Q |
| |
|
||||| ||||| || || ||||||||||| ||||| ||| |||| | |||||||||||||| | |||||||| |||| ||||||||| |
|
|
| T |
26813688 |
tttaagtctttagcttgtgtgattgcagttaccatgggtctccatgtgcttggaagacatcttaaaatttttcttattcgatcatgagt |
26813600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 21211417 - 21211658
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21211417 |
acatcttcatcatcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
21211516 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21211517 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
21211616 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
21211617 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
21211658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 14892199 - 14892438
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14892199 |
acatcatcatcagctactgatgagctttgctgagatgctttcaaggcaagtgttttcaccttcttcactggtttgtctccttgaagtacaacttcatgag |
14892298 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14892299 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatcttctgcctgagtaattgcagtgaccataggtctccacatacttggaagacatct |
14892398 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgccttt |
260 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14892399 |
caatatttttctaattctatcatgagtagaatataccttt |
14892438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 23 - 260
Target Start/End: Complemental strand, 22832631 - 22832394
Alignment:
| Q |
23 |
atcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagct |
122 |
Q |
| |
|
|||||||||| | |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
22832631 |
atcatcatcagctactgatgaggtttgctgagaggctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtactacttcaggagct |
22832532 |
T |
|
| Q |
123 |
ctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctca |
222 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||| |
|
|
| T |
22832531 |
ctcagtgaaccaatgagatcttcaaggttcatagatttcaaatctttggcctgagtgattgcagtgacgataggtctccacataattggaagacatctcg |
22832432 |
T |
|
| Q |
223 |
gtatttttctaattctatcatgagtagaatatgccttt |
260 |
Q |
| |
|
| || |||| ||||| |||||||| |||||||||||| |
|
|
| T |
22832431 |
gaatctttccgattctttcatgagtggaatatgccttt |
22832394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 33600415 - 33600572
Alignment:
| Q |
89 |
tggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtg |
188 |
Q |
| |
|
|||||||||| ||||||| | ||||||||| ||||| |||| |||||||||||||| | || || ||||| ||||||| ||||||||||| || |
|
|
| T |
33600415 |
tggtttgtcttcttgaagcaaaacttcatgggctcttagtgttccaatgagatcttctaaagccaaggaatttaagtctttggattgagtgattgctgta |
33600514 |
T |
|
| Q |
189 |
accataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
246 |
Q |
| |
|
||||||||| |||| || | ||||||||||| || |||||||| ||||| ||||||| |
|
|
| T |
33600515 |
accataggtctccatattttaggaagacatctgaggatttttctgattctgtcatgag |
33600572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 18234114 - 18234027
Alignment:
| Q |
159 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
246 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| || |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
18234114 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag |
18234027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 18243565 - 18243478
Alignment:
| Q |
159 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
246 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| || |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
18243565 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag |
18243478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 12916743 - 12916656
Alignment:
| Q |
159 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
246 |
Q |
| |
|
|||| ||||||| | ||||||||||| || ||||||||| |||| | |||| |||||||| | ||||||||||||||| ||||||| |
|
|
| T |
12916743 |
tttagatctttgtcttgagtgattgctgtaaccataggtctccatgtgtttgggagacatcttaatatttttctaattctgtcatgag |
12916656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 25035933 - 25036028
Alignment:
| Q |
159 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatat |
254 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| | |||| | |||||| | ||||||||| ||||| ||||||| ||||||| |
|
|
| T |
25035933 |
tttaagtctttggcttgagtgattgccgtaaccataggtctccatgtgtttgggaaacatcttaatatttttctgattctgtcatgaggagaatat |
25036028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 25049970 - 25050065
Alignment:
| Q |
159 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatat |
254 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| | |||| | |||||| | ||||||||| ||||| ||||||| ||||||| |
|
|
| T |
25049970 |
tttaagtctttggcttgagtgattgccgtaaccataggtctccatgtgtttgggaaacatcttaatatttttctgattctgtcatgaggagaatat |
25050065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 6536378 - 6536137
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6536378 |
acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
6536279 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6536278 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
6536179 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6536178 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
6536137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 9543687 - 9543928
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||| ||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9543687 |
acatcatcttcagcagctgatgagctttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
9543786 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9543787 |
ctctcagtgaaccaataagatcttccaggttcatagattttaaatctttggcctgggtgattgcagtgaccataggtctccacatacttggaagacatct |
9543886 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9543887 |
tagtatttttctaattctatcatgagtagaatatgcctttcc |
9543928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 5389618 - 5389859
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5389618 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
5389717 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5389718 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
5389817 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5389818 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
5389859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 8502943 - 8502702
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8502943 |
acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag |
8502844 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
8502843 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
8502744 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8502743 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
8502702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 26305450 - 26305209
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26305450 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
26305351 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26305350 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
26305251 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
26305250 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
26305209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 26361368 - 26361609
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26361368 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
26361467 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26361468 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
26361567 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
26361568 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
26361609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 32100274 - 32100033
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32100274 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
32100175 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
32100174 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
32100075 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
32100074 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
32100033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 44899193 - 44898952
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
44899193 |
acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag |
44899094 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
44899093 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
44898994 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
44898993 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
44898952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 16140631 - 16140872
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16140631 |
acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
16140730 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
16140731 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct |
16140830 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16140831 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
16140872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 46499008 - 46498767
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
46499008 |
acatcttcatcagcaactgatggagtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttaaagtacaacttcatgag |
46498909 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
46498908 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct |
46498809 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
46498808 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
46498767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 42597237 - 42597011
Alignment:
| Q |
36 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
135 |
Q |
| |
|
|||||||| |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
42597237 |
actgatgaggtttgttgagaggctttcaaggcaagtgactttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaacaaa |
42597138 |
T |
|
| Q |
136 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
235 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||| || |
|
|
| T |
42597137 |
tgagatcttccaggttcatagatttcaaatctttggcctcagtgattgcagtgaccataggtctctacatacttggaaggcatctcaatatttttctgat |
42597038 |
T |
|
| Q |
236 |
tctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| |||||||| |||||||||||||| |
|
|
| T |
42597037 |
tctctcatgagtggaatatgcctttcc |
42597011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 259
Target Start/End: Original strand, 13283877 - 13284115
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| ||||||||| ||| |||||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
13283877 |
acatcatcatcagttactgatgaagtttactgagaggctttcaaggcaagtgactttaccttctttactagtttgtctccttgaagtacaacttcatgag |
13283976 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
13283977 |
ctctaagtgaaccaatgagatcttccaggttcatagatttcaaatctttggcctgagtgattgaagtgaccataggtctccacatacttggaaggcatct |
13284076 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctt |
259 |
Q |
| |
|
| ||||||||| ||||| |||||||| || |||||||| |
|
|
| T |
13284077 |
taatatttttctgattctctcatgagtggagtatgcctt |
13284115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 246
Target Start/End: Original strand, 14643279 - 14643452
Alignment:
| Q |
73 |
tttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggc |
172 |
Q |
| |
|
||||| |||| ||||| ||||| ||| |||| |||| || |||||||||||| || | ||||| ||||| || ||| || || |||| ||||||||| |
|
|
| T |
14643279 |
tttttccctttttcaccggtttatcttcttggagtagaatttcatgagctctaagcgttccaataagatcctctagggccaaggaatttagatctttggc |
14643378 |
T |
|
| Q |
173 |
ctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
246 |
Q |
| |
|
||||||||||| || ||||||||| |||| | |||| |||||||| | ||||||||||||||| ||||||| |
|
|
| T |
14643379 |
ttgagtgattgctgtaaccataggtctccatgtgtttgggagacatcttaatatttttctaattctgtcatgag |
14643452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 27414042 - 27413801
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27414042 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaagcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
27413943 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
27413942 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct |
27413843 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27413842 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
27413801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 26200772 - 26201013
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26200772 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
26200871 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26200872 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
26200971 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
26200972 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
26201013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 33941214 - 33940973
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
33941214 |
acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag |
33941115 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
33941114 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
33941015 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
33941014 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
33940973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 18363171 - 18362930
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18363171 |
acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
18363072 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
18363071 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct |
18362972 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18362971 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
18362930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 20949734 - 20949508
Alignment:
| Q |
36 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
135 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20949734 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
20949635 |
T |
|
| Q |
136 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
235 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
20949634 |
tgagatcttccaggttcatagatttcaaatccttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
20949535 |
T |
|
| Q |
236 |
tctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| |||||||| |||||||| ||||| |
|
|
| T |
20949534 |
tctctcatgagtggaatatgcttttcc |
20949508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 37 - 254
Target Start/End: Original strand, 23375368 - 23375577
Alignment:
| Q |
37 |
ctgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaat |
136 |
Q |
| |
|
|||||||| |||| |||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23375368 |
ctgatgaagtttgttgagatgctttcaaggaaagtgattttacctttttcactggtttgtctttttgaagtacaacttcatgagctctcagtgaaccaat |
23375467 |
T |
|
| Q |
137 |
gagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaatt |
236 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||| ||||||||| ||| |
|
|
| T |
23375468 |
gagatcttcaaggttcatagattttaaatctttggcctgagtaattgca---tccataggtctccacatacttg-----catctcaatatttttctgatt |
23375559 |
T |
|
| Q |
237 |
ctatcatgagtagaatat |
254 |
Q |
| |
|
|| |||||||| |||||| |
|
|
| T |
23375560 |
ctttcatgagtggaatat |
23375577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 254
Target Start/End: Original strand, 22456358 - 22456523
Alignment:
| Q |
89 |
tggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtg |
188 |
Q |
| |
|
|||||||||| ||||||| | ||||||||||||||| |||| |||||||||||||| | || || |||||||||||||| ||||||||| | || |
|
|
| T |
22456358 |
tggtttgtcttcttgaagcaaaacttcatgagctcttagtgttccaatgagatcttctaaagccaaggaatttaaatctttggcttgagtgatttctgta |
22456457 |
T |
|
| Q |
189 |
accataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatat |
254 |
Q |
| |
|
||||||||| |||| ||| | ||||||||||| | ||||||||| ||||| ||||||| ||||||| |
|
|
| T |
22456458 |
accataggtctccatatattaggaagacatcttaatatttttctgattctgtcatgaggagaatat |
22456523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 246
Target Start/End: Complemental strand, 20037526 - 20037353
Alignment:
| Q |
73 |
tttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggc |
172 |
Q |
| |
|
||||| |||| ||||| ||||| ||| |||| |||| ||||||||||||||| |||| |||||||||| ||| | || || |||| ||| ||||| |
|
|
| T |
20037526 |
tttttccctttttcaccggtttatcttcttggagtagaacttcatgagctctaagtgttccaatgagattttctaaagccaaggaatttagatcgttggc |
20037427 |
T |
|
| Q |
173 |
ctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
246 |
Q |
| |
|
|||||||||| || ||||||||| ||||| | |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
20037426 |
ttgagtgattgttgtaaccataggtctccacgtgtttgggagacatcttaatatttttctgattctgtcatgag |
20037353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 24299175 - 24299262
Alignment:
| Q |
159 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
246 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| || |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
24299175 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag |
24299262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 5601928 - 5601840
Alignment:
| Q |
165 |
tctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaata |
253 |
Q |
| |
|
||||| || ||||||||||| || ||||| ||| |||| | ||||||||||||| ||||||||||| ||||| || || |||||||| |
|
|
| T |
5601928 |
tctttagcttgagtgattgccgtaaccatgggtctccattgagttggaagacatcttagtatttttcttattctgtcgtgggtagaata |
5601840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 45016247 - 45016006
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
45016247 |
acatcatcatcagcaactgatgagcttgactgagatgcttttaaggcaagtgtttttaccttctttactggtttgtctccttgaagtacaacttcatgag |
45016148 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
45016147 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
45016048 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
45016047 |
cagtatttttctaattctatcatgagtagaatatgcatttcc |
45016006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 9512211 - 9512452
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9512211 |
acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag |
9512310 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9512311 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
9512410 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9512411 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
9512452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 18653112 - 18652871
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
18653112 |
acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag |
18653013 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
18653012 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
18652913 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18652912 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
18652871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 36 - 262
Target Start/End: Original strand, 27168448 - 27168674
Alignment:
| Q |
36 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
135 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27168448 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttactttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
27168547 |
T |
|
| Q |
136 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
235 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
27168548 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
27168647 |
T |
|
| Q |
236 |
tctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| |||||||| |||||||| ||||| |
|
|
| T |
27168648 |
tctctcatgagtggaatatgcttttcc |
27168674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 22904033 - 22903792
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||| ||| | |||||||| |||||||||| ||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22904033 |
acatcatcttcagctactgatgaggtttgctgagaggcttttaaggcaagtgactttaccttcttcattggtttgtctccttgaagtacaacttcatgag |
22903934 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||||||||||| || || |
|
|
| T |
22903933 |
ctctcagtgaaccaatgagatcttccaagttcatagatttcaaatctttggcctgagtaattgcagttaccataggtctccacatacttggaaggcaact |
22903834 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|| ||||||||| ||| | |||||||| |||||| |||||| |
|
|
| T |
22903833 |
caatatttttctgattatctcatgagtgaaatatgtctttcc |
22903792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 1792304 - 1792216
Alignment:
| Q |
165 |
tctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaata |
253 |
Q |
| |
|
||||| || ||||||||||| || ||||| ||| |||| | ||||||||||||| ||||||||||| ||||| || || |||||||| |
|
|
| T |
1792304 |
tctttagcttgagtgattgccgtaaccatgggtctccattgagttggaagacatcttagtatttttcttattctgtcgtgggtagaata |
1792216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 31359455 - 31359214
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31359455 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
31359356 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31359355 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
31359256 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31359255 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
31359214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 16899840 - 16899599
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16899840 |
acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
16899741 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
16899740 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct |
16899641 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16899640 |
cagaatttttctaattctatcatgagttgaatatgcctttcc |
16899599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 18161959 - 18161718
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18161959 |
acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
18161860 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
18161859 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct |
18161760 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18161759 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
18161718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 34767235 - 34767009
Alignment:
| Q |
36 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
135 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34767235 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
34767136 |
T |
|
| Q |
136 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
235 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
34767135 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
34767036 |
T |
|
| Q |
236 |
tctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| |||||||| |||||||| ||||| |
|
|
| T |
34767035 |
tctctcatgagtggaatatgcttttcc |
34767009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 18704490 - 18704731
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | ||| |||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
18704490 |
acatcatcatcagctacttatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactgggttgtctccttgaagtacaactgcatgag |
18704589 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
18704590 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttggaagacatct |
18704689 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|| || ||||| ||||| |||||||| |||||| ||||||| |
|
|
| T |
18704690 |
tagaatctttctgattctctcatgagtggaatattcctttcc |
18704731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 18710425 - 18710666
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | ||| |||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
18710425 |
acatcatcatcagctacttatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactgggttgtctccttgaagtacaactgcatgag |
18710524 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
18710525 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttggaagacatct |
18710624 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|| || ||||| ||||| |||||||| |||||| ||||||| |
|
|
| T |
18710625 |
tagaatctttctgattctctcatgagtggaatattcctttcc |
18710666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 220
Target Start/End: Complemental strand, 29561320 - 29561121
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
29561320 |
acatcatcatcagctactgatgaggtttgctgagatgctttcaaagcaagtgtttttacattcttcactggtttatctccttgaagtacgacttcatgag |
29561221 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| || |||| ||||| ||||||||| |
|
|
| T |
29561220 |
ctcttagtgaaccaatgagatctttcaggttcatagattttaaatctttggcctaagtaattgttgtgaccatatgtcctcacacacttgaaagacatct |
29561121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 25895891 - 25895804
Alignment:
| Q |
159 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
246 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| || |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
25895891 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag |
25895804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 29542147 - 29542100
Alignment:
| Q |
215 |
acatctcagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|||||| | ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
29542147 |
acatcttaatatttttctgattctatcatgagtggaatatgcctttcc |
29542100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 9539029 - 9538788
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9539029 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
9538930 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9538929 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct |
9538830 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9538829 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
9538788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 6424201 - 6423960
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6424201 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
6424102 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| || |
|
|
| T |
6424101 |
ctcttagtgaaccaatgagatcttccaggtttatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacacct |
6424002 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6424001 |
cagtatttttctaattctatcatgagtagaatatgcatttcc |
6423960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 8974740 - 8974499
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8974740 |
acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtctttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
8974641 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
8974640 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct |
8974541 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8974540 |
cagaatttttctaattctatcatgagtggaatatgcctttcc |
8974499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 12387802 - 12387640
Alignment:
| Q |
100 |
cttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgt |
199 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||| ||||| ||| |||||||| |||||||||||||||||| | |
|
|
| T |
12387802 |
cttgaagtacaacttcatgagctatcagtgaatcaatgagatcttccaagttcatatattgtaaatatttagcctgagtaattgcagtgaccataggtct |
12387703 |
T |
|
| Q |
200 |
ccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
| |||||||||||| ||||||| ||||||||| | ||| |||| ||| |||||||||||||| |
|
|
| T |
12387702 |
tcgcatacttggaaggcatctcaatatttttctgactctctcataagtggaatatgcctttcc |
12387640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 48980022 - 48979934
Alignment:
| Q |
165 |
tctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaata |
253 |
Q |
| |
|
||||| || ||||||||||| || ||||| ||| |||| | ||||||||||||| ||||||||||| ||||| || || |||||||| |
|
|
| T |
48980022 |
tctttagcttgagtgattgccgtaaccatgggtctccattgagttggaagacatcttagtatttttcttattctgtcgtgggtagaata |
48979934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 16156777 - 16156536
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16156777 |
acatcttcatcagcaactgatggggtttgctgagatgctttcaaagcaggtgtttttaccttcttcactggtttgtctcgttgaagtacaacttcatgag |
16156678 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
16156677 |
ctcttagtgaaccaatgagatcttccaggttcatagattttaaatcttttgcctgagtgattgcagtgaccataggtctccacacacttggaagacatct |
16156578 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16156577 |
cagtatttttctaattttatcatgagtagaatatgcctttcc |
16156536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 36 - 262
Target Start/End: Original strand, 1987651 - 1987877
Alignment:
| Q |
36 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
135 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
1987651 |
actgatgagatttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctcttagtgaaccaa |
1987750 |
T |
|
| Q |
136 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
235 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||| || |
|
|
| T |
1987751 |
tgagatcttccagattcatagatttcaaatctttggcctgagtgatttcagtgaccataggtctccacatacttggaagtcatctcaatatttttctgat |
1987850 |
T |
|
| Q |
236 |
tctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| |||||||| |||||||| ||||| |
|
|
| T |
1987851 |
tctctcatgagtggaatatgcttttcc |
1987877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 51 - 247
Target Start/End: Complemental strand, 22960190 - 22959995
Alignment:
| Q |
51 |
tgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggt |
150 |
Q |
| |
|
||||| ||||| |||| ||||| |||||||||| |||||||||| ||||||| ||||| ||||||||||||||| ||||||||| |||| ||||||| |
|
|
| T |
22960190 |
tgagaagcttttaaggtaagtgattttaccttcctcactggtttatctccttaaagtataacttcatgagctcttagtgaacca-tgagttcttccaaag |
22960092 |
T |
|
| Q |
151 |
tcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagt |
247 |
Q |
| |
|
||| ||| |||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| ||||| || || |||||||||||||| |
|
|
| T |
22960091 |
tcaaagagtttaaatctttggcttgagtaattgcagtgaccataggtctccatatacttggaagacatcttagtatcttcctgattctatcatgagt |
22959995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 148602 - 148363
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | |||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
148602 |
acatcatcatcagctactgatgagctttgctgagatgctttcaaggtaagtgtttttactttcttcactggtttgtctccttgaagtacaacgtcatgag |
148503 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
148502 |
ctctcagtgaaccaatgagatcctctaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct |
148403 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgccttt |
260 |
Q |
| |
|
| ||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
148402 |
taatatttttctgattctatcatgagtataatatgccttt |
148363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0611 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0611
Description:
Target: scaffold0611; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 23 - 232
Target Start/End: Complemental strand, 210 - 1
Alignment:
| Q |
23 |
atcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagct |
122 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
210 |
atcatcatcagcaactgatgaactttgctgagatgctttcaaggaaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagct |
111 |
T |
|
| Q |
123 |
ctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctca |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
110 |
ctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctaagtaattgcagtgaccataggtctccaaatacttggaagacatctca |
11 |
T |
|
| Q |
223 |
gtatttttct |
232 |
Q |
| |
|
||||||||| |
|
|
| T |
10 |
atatttttct |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0254 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0254
Description:
Target: scaffold0254; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 36 - 262
Target Start/End: Original strand, 6030 - 6256
Alignment:
| Q |
36 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
135 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6030 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
6129 |
T |
|
| Q |
136 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
235 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
6130 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
6229 |
T |
|
| Q |
236 |
tctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| |||||||| |||||||||||||| |
|
|
| T |
6230 |
tctctcatgagtggaatatgcctttcc |
6256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 52979 - 53218
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | |||||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
52979 |
acatcatcatcagctactgatgagctttgatgagatgctttcaaggcaagtgttttcaccttcttcactagtttgtctccttgaagtataacttcatgag |
53078 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
220 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
53079 |
ctctcagtgatccaatgagatcttcgaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccatatacttggaagacatct |
53178 |
T |
|
| Q |
221 |
cagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
53179 |
c--tatttttctgattctatcatgagtagaatatgcctttcc |
53218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313 (Bit Score: 175; Significance: 3e-94; HSPs: 2)
Name: scaffold0313
Description:
Target: scaffold0313; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 7648 - 7422
Alignment:
| Q |
36 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
135 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7648 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
7549 |
T |
|
| Q |
136 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
235 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
7548 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
7449 |
T |
|
| Q |
236 |
tctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| |||||||| |||||||| ||||| |
|
|
| T |
7448 |
tctctcatgagtggaatatgcttttcc |
7422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 11430 - 11204
Alignment:
| Q |
36 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
135 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11430 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
11331 |
T |
|
| Q |
136 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
235 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
11330 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
11231 |
T |
|
| Q |
236 |
tctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
||| |||||||| |||||||| ||||| |
|
|
| T |
11230 |
tctctcatgagtggaatatgcttttcc |
11204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 37 - 254
Target Start/End: Complemental strand, 17097 - 16888
Alignment:
| Q |
37 |
ctgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaat |
136 |
Q |
| |
|
|||||||| |||| |||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17097 |
ctgatgaagtttgttgagatgctttcaaggaaagtgattttacctttttcactggtttgtctttttgaagtacaacttcatgagctctcagtgaaccaat |
16998 |
T |
|
| Q |
137 |
gagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaatt |
236 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||| ||||||||| ||| |
|
|
| T |
16997 |
gagatcttcaaggttcatagattttaaatctttggcctgagtaattgca---tccataggtctccacatacttg-----catctcaatatttttctgatt |
16906 |
T |
|
| Q |
237 |
ctatcatgagtagaatat |
254 |
Q |
| |
|
|| |||||||| |||||| |
|
|
| T |
16905 |
ctttcatgagtggaatat |
16888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0141
Description:
Target: scaffold0141; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 190
Target Start/End: Complemental strand, 27839 - 27670
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27839 |
acatcatcatcagctactgatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtataacttcatgag |
27740 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgac |
190 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
27739 |
ctctcaatgaaccaatgagatcttccaggttcatagattttaaatctttgatctgagtaattgtagtgac |
27670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 20506 - 20428
Alignment:
| Q |
184 |
cagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatatgcctttcc |
262 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||| || || ||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
20506 |
cagtgaccataggtctccacattcttggaagacatcttagaatctttctgattctctcatgagtggaatatgcctttcc |
20428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 86973 - 87142
Alignment:
| Q |
21 |
acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag |
120 |
Q |
| |
|
|||||||||||| | |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
86973 |
acatcatcatcagctactgatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtataacttcatgag |
87072 |
T |
|
| Q |
121 |
ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgac |
190 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
87073 |
ctctcaatgaaccaatgagatcttccaggttcatagattttaaatctttgatctgagtaattgtagtgac |
87142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 247
Target Start/End: Original strand, 189005 - 189200
Alignment:
| Q |
51 |
tgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggt |
150 |
Q |
| |
|
||||| ||||| |||||||||| ||||||||| ||| |||||| ||||||| ||||| ||||||||||||||| ||||||||| |||| |||||| |
|
|
| T |
189005 |
tgagaagcttttaaggcaagtgattttacctttctcattggtttatctccttaaagtataacttcatgagctcttagtgaacca-tgagtacttccaaag |
189103 |
T |
|
| Q |
151 |
tcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagt |
247 |
Q |
| |
|
||| ||| |||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
189104 |
tcaaagagtttaaatctttggcttgagtaattgcagtgaccataggcctccatgtacttggaagacatcttagtatcttcctaattctatcatgagt |
189200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0529 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0529
Description:
Target: scaffold0529; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 290 - 179
Alignment:
| Q |
150 |
ttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtag |
249 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||| | |
|
|
| T |
290 |
ttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcattatttttcttattctttcatgagtgg |
191 |
T |
|
| Q |
250 |
aatatgcctttc |
261 |
Q |
| |
|
||||||| |||| |
|
|
| T |
190 |
aatatgcttttc |
179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 258253 - 258166
Alignment:
| Q |
159 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
246 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| | |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
258253 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtttttgggagacatcttaatatttttctgattctgtcatgag |
258166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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