View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0402_low_5 (Length: 262)

Name: NF0402_low_5
Description: NF0402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0402_low_5
NF0402_low_5
[»] chr4 (6 HSPs)
chr4 (21-262)||(16254886-16255127)
chr4 (21-262)||(6693871-6694112)
chr4 (21-260)||(17151028-17151267)
chr4 (36-255)||(520375-520594)
chr4 (21-262)||(7844905-7845146)
chr4 (159-247)||(26813600-26813688)
[»] chr8 (9 HSPs)
chr8 (21-262)||(21211417-21211658)
chr8 (21-260)||(14892199-14892438)
chr8 (23-260)||(22832394-22832631)
chr8 (89-246)||(33600415-33600572)
chr8 (159-246)||(18234027-18234114)
chr8 (159-246)||(18243478-18243565)
chr8 (159-246)||(12916656-12916743)
chr8 (159-254)||(25035933-25036028)
chr8 (159-254)||(25049970-25050065)
[»] chr7 (13 HSPs)
chr7 (21-262)||(6536137-6536378)
chr7 (21-262)||(9543687-9543928)
chr7 (21-262)||(5389618-5389859)
chr7 (21-262)||(8502702-8502943)
chr7 (21-262)||(26305209-26305450)
chr7 (21-262)||(26361368-26361609)
chr7 (21-262)||(32100033-32100274)
chr7 (21-262)||(44898952-44899193)
chr7 (21-262)||(16140631-16140872)
chr7 (21-262)||(46498767-46499008)
chr7 (36-262)||(42597011-42597237)
chr7 (21-259)||(13283877-13284115)
chr7 (73-246)||(14643279-14643452)
[»] chr5 (10 HSPs)
chr5 (21-262)||(27413801-27414042)
chr5 (21-262)||(26200772-26201013)
chr5 (21-262)||(33940973-33941214)
chr5 (21-262)||(18362930-18363171)
chr5 (36-262)||(20949508-20949734)
chr5 (37-254)||(23375368-23375577)
chr5 (89-254)||(22456358-22456523)
chr5 (73-246)||(20037353-20037526)
chr5 (159-246)||(24299175-24299262)
chr5 (165-253)||(5601840-5601928)
[»] chr2 (6 HSPs)
chr2 (21-262)||(45016006-45016247)
chr2 (21-262)||(9512211-9512452)
chr2 (21-262)||(18652871-18653112)
chr2 (36-262)||(27168448-27168674)
chr2 (21-262)||(22903792-22904033)
chr2 (165-253)||(1792216-1792304)
[»] chr6 (9 HSPs)
chr6 (21-262)||(31359214-31359455)
chr6 (21-262)||(16899599-16899840)
chr6 (21-262)||(18161718-18161959)
chr6 (36-262)||(34767009-34767235)
chr6 (21-262)||(18704490-18704731)
chr6 (21-262)||(18710425-18710666)
chr6 (21-220)||(29561121-29561320)
chr6 (159-246)||(25895804-25895891)
chr6 (215-262)||(29542100-29542147)
[»] chr3 (5 HSPs)
chr3 (21-262)||(9538788-9539029)
chr3 (21-262)||(6423960-6424201)
chr3 (21-262)||(8974499-8974740)
chr3 (100-262)||(12387640-12387802)
chr3 (165-253)||(48979934-48980022)
[»] chr1 (3 HSPs)
chr1 (21-262)||(16156536-16156777)
chr1 (36-262)||(1987651-1987877)
chr1 (51-247)||(22959995-22960190)
[»] scaffold0014 (1 HSPs)
scaffold0014 (21-260)||(148363-148602)
[»] scaffold0611 (1 HSPs)
scaffold0611 (23-232)||(1-210)
[»] scaffold0254 (1 HSPs)
scaffold0254 (36-262)||(6030-6256)
[»] scaffold0058 (1 HSPs)
scaffold0058 (21-262)||(52979-53218)
[»] scaffold0313 (2 HSPs)
scaffold0313 (36-262)||(7422-7648)
scaffold0313 (36-262)||(11204-11430)
[»] scaffold0016 (1 HSPs)
scaffold0016 (37-254)||(16888-17097)
[»] scaffold0141 (2 HSPs)
scaffold0141 (21-190)||(27670-27839)
scaffold0141 (184-262)||(20428-20506)
[»] scaffold0049 (1 HSPs)
scaffold0049 (21-190)||(86973-87142)
[»] scaffold0015 (1 HSPs)
scaffold0015 (51-247)||(189005-189200)
[»] scaffold0529 (1 HSPs)
scaffold0529 (150-261)||(179-290)
[»] scaffold0010 (1 HSPs)
scaffold0010 (159-246)||(258166-258253)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 16255127 - 16254886
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16255127 acatcatcatcagcaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 16255028  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||    
T  16255027 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctaagtaattacagtgaccataggtctccacatacttggaagacatct 16254928  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    || ||||||||| |||||||||||||||||||||||||||||    
T  16254927 caatatttttctgattctatcatgagtagaatatgcctttcc 16254886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 6694112 - 6693871
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6694112 acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 6694013  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6694012 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 6693913  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  6693912 cagaatttttctaattctatcatgagtggaatatgcctttcc 6693871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 17151267 - 17151028
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17151267 acatcatcatcagctactgatgaggtttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 17151168  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||| | |||||||||||||||    
T  17151167 ctcttagtgaaccaatgagatcttccaggttcatagattataaatctttggcctgagtaattgcattgaccataggtctccaaacacttggaagacatct 17151068  T
Q  221 cagtatttttctaattctatcatgagtagaatatgccttt 260  Q
     | |||||||||||||| | ||||||||||||||||||||    
T  17151067 taatatttttctaattcaaacatgagtagaatatgccttt 17151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 36 - 255
Target Start/End: Original strand, 520375 - 520594
Alignment:
Q  36 actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 135  Q
    ||||||||  |||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  520375 actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 520474  T
Q  136 tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  520475 tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat 520574  T
Q  236 tctatcatgagtagaatatg 255  Q
    ||| |||||||| |||||||    
T  520575 tctctcatgagtggaatatg 520594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 7844905 - 7845146
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | ||| |||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7844905 acatcatcatcagctactaatgagctttgttgagatgctttcaatgcaagtgtctttaccttcttcactggtttgtctccttgaagtacaacttcatgag 7845004  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||||| ||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| |||| | |||||||||||||||    
T  7845005 ctctcaatgagccaatgagatcttctagattcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccatacacttggaagacatct 7845104  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
     | ||||||||| |||||||||| ||||||||| ||||||||    
T  7845105 taatatttttctgattctatcataagtagaataagcctttcc 7845146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 26813688 - 26813600
Alignment:
Q  159 tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagt 247  Q
    ||||| ||||| || || ||||||||||| ||||| ||| ||||  | |||||||||||||| |  |||||||| |||| |||||||||    
T  26813688 tttaagtctttagcttgtgtgattgcagttaccatgggtctccatgtgcttggaagacatcttaaaatttttcttattcgatcatgagt 26813600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 21211417 - 21211658
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21211417 acatcttcatcatcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 21211516  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21211517 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 21211616  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  21211617 cagaatttttctaattctatcatgagtggaatatgcctttcc 21211658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 14892199 - 14892438
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14892199 acatcatcatcagctactgatgagctttgctgagatgctttcaaggcaagtgttttcaccttcttcactggtttgtctccttgaagtacaacttcatgag 14892298  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  14892299 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatcttctgcctgagtaattgcagtgaccataggtctccacatacttggaagacatct 14892398  T
Q  221 cagtatttttctaattctatcatgagtagaatatgccttt 260  Q
    || ||||||||||||||||||||||||||||||| |||||    
T  14892399 caatatttttctaattctatcatgagtagaatataccttt 14892438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 23 - 260
Target Start/End: Complemental strand, 22832631 - 22832394
Alignment:
Q  23 atcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagct 122  Q
    |||||||||| | ||||||||  |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  22832631 atcatcatcagctactgatgaggtttgctgagaggctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtactacttcaggagct 22832532  T
Q  123 ctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctca 222  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||     
T  22832531 ctcagtgaaccaatgagatcttcaaggttcatagatttcaaatctttggcctgagtgattgcagtgacgataggtctccacataattggaagacatctcg 22832432  T
Q  223 gtatttttctaattctatcatgagtagaatatgccttt 260  Q
    | || ||||  ||||| |||||||| ||||||||||||    
T  22832431 gaatctttccgattctttcatgagtggaatatgccttt 22832394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 33600415 - 33600572
Alignment:
Q  89 tggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtg 188  Q
    |||||||||| ||||||| | ||||||||| ||||| ||||  |||||||||||||| |    ||  || ||||| |||||||  ||||||||||| ||     
T  33600415 tggtttgtcttcttgaagcaaaacttcatgggctcttagtgttccaatgagatcttctaaagccaaggaatttaagtctttggattgagtgattgctgta 33600514  T
Q  189 accataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag 246  Q
    ||||||||| |||| ||  | ||||||||||| || |||||||| ||||| |||||||    
T  33600515 accataggtctccatattttaggaagacatctgaggatttttctgattctgtcatgag 33600572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 18234114 - 18234027
Alignment:
Q  159 tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag 246  Q
    ||||| |||||||| ||||||||||| || ||||||||| ||||  || |||| |||||||| | ||||||||| ||||| |||||||    
T  18234114 tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag 18234027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 18243565 - 18243478
Alignment:
Q  159 tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag 246  Q
    ||||| |||||||| ||||||||||| || ||||||||| ||||  || |||| |||||||| | ||||||||| ||||| |||||||    
T  18243565 tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag 18243478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 12916743 - 12916656
Alignment:
Q  159 tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag 246  Q
    |||| ||||||| | ||||||||||| || ||||||||| ||||  |  |||| |||||||| | ||||||||||||||| |||||||    
T  12916743 tttagatctttgtcttgagtgattgctgtaaccataggtctccatgtgtttgggagacatcttaatatttttctaattctgtcatgag 12916656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 25035933 - 25036028
Alignment:
Q  159 tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatat 254  Q
    ||||| |||||||| ||||||||||| || ||||||||| ||||  |  |||| | |||||| | ||||||||| ||||| ||||||| |||||||    
T  25035933 tttaagtctttggcttgagtgattgccgtaaccataggtctccatgtgtttgggaaacatcttaatatttttctgattctgtcatgaggagaatat 25036028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 25049970 - 25050065
Alignment:
Q  159 tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatat 254  Q
    ||||| |||||||| ||||||||||| || ||||||||| ||||  |  |||| | |||||| | ||||||||| ||||| ||||||| |||||||    
T  25049970 tttaagtctttggcttgagtgattgccgtaaccataggtctccatgtgtttgggaaacatcttaatatttttctgattctgtcatgaggagaatat 25050065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 6536378 - 6536137
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6536378 acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 6536279  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6536278 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 6536179  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  6536178 cagaatttttctaattctatcatgagtggaatatgcctttcc 6536137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 9543687 - 9543928
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||| ||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9543687 acatcatcttcagcagctgatgagctttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 9543786  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  9543787 ctctcagtgaaccaataagatcttccaggttcatagattttaaatctttggcctgggtgattgcagtgaccataggtctccacatacttggaagacatct 9543886  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  9543887 tagtatttttctaattctatcatgagtagaatatgcctttcc 9543928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 5389618 - 5389859
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5389618 acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 5389717  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5389718 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 5389817  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  5389818 cagaatttttctaattctatcatgagtggaatatgcctttcc 5389859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 8502943 - 8502702
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  8502943 acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag 8502844  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8502843 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 8502744  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  8502743 cagaatttttctaattctatcatgagtggaatatgcctttcc 8502702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 26305450 - 26305209
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26305450 acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 26305351  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26305350 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 26305251  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  26305250 cagaatttttctaattctatcatgagtggaatatgcctttcc 26305209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 26361368 - 26361609
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26361368 acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 26361467  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26361468 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 26361567  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  26361568 cagaatttttctaattctatcatgagtggaatatgcctttcc 26361609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 32100274 - 32100033
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32100274 acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 32100175  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32100174 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 32100075  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  32100074 cagaatttttctaattctatcatgagtggaatatgcctttcc 32100033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 44899193 - 44898952
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  44899193 acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag 44899094  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44899093 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 44898994  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  44898993 cagaatttttctaattctatcatgagtggaatatgcctttcc 44898952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 16140631 - 16140872
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16140631 acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 16140730  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  16140731 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct 16140830  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  16140831 cagaatttttctaattctatcatgagtggaatatgcctttcc 16140872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 46499008 - 46498767
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46499008 acatcttcatcagcaactgatggagtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttaaagtacaacttcatgag 46498909  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  46498908 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct 46498809  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  46498808 cagaatttttctaattctatcatgagtggaatatgcctttcc 46498767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 42597237 - 42597011
Alignment:
Q  36 actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 135  Q
    ||||||||  |||| ||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42597237 actgatgaggtttgttgagaggctttcaaggcaagtgactttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaacaaa 42597138  T
Q  136 tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat 235  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||| ||    
T  42597137 tgagatcttccaggttcatagatttcaaatctttggcctcagtgattgcagtgaccataggtctctacatacttggaaggcatctcaatatttttctgat 42597038  T
Q  236 tctatcatgagtagaatatgcctttcc 262  Q
    ||| |||||||| ||||||||||||||    
T  42597037 tctctcatgagtggaatatgcctttcc 42597011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 259
Target Start/End: Original strand, 13283877 - 13284115
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||||||||||   ||||||||| ||| |||||| ||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  13283877 acatcatcatcagttactgatgaagtttactgagaggctttcaaggcaagtgactttaccttctttactagtttgtctccttgaagtacaacttcatgag 13283976  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  13283977 ctctaagtgaaccaatgagatcttccaggttcatagatttcaaatctttggcctgagtgattgaagtgaccataggtctccacatacttggaaggcatct 13284076  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctt 259  Q
     | ||||||||| ||||| |||||||| || ||||||||    
T  13284077 taatatttttctgattctctcatgagtggagtatgcctt 13284115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 246
Target Start/End: Original strand, 14643279 - 14643452
Alignment:
Q  73 tttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggc 172  Q
    ||||| |||| ||||| ||||| ||| |||| |||| || |||||||||||| || |  ||||| ||||| || |||  ||  || |||| |||||||||    
T  14643279 tttttccctttttcaccggtttatcttcttggagtagaatttcatgagctctaagcgttccaataagatcctctagggccaaggaatttagatctttggc 14643378  T
Q  173 ctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag 246  Q
     ||||||||||| || ||||||||| ||||  |  |||| |||||||| | ||||||||||||||| |||||||    
T  14643379 ttgagtgattgctgtaaccataggtctccatgtgtttgggagacatcttaatatttttctaattctgtcatgag 14643452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 27414042 - 27413801
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27414042 acatcttcatcagcaactgatggggtttgctgagatgctttcaaagcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 27413943  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  27413942 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct 27413843  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27413842 cagtatttttctaattctatcatgagtagaatatgcctttcc 27413801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 26200772 - 26201013
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26200772 acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 26200871  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26200872 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 26200971  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  26200972 cagaatttttctaattctatcatgagtggaatatgcctttcc 26201013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 33941214 - 33940973
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  33941214 acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag 33941115  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33941114 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 33941015  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  33941014 cagaatttttctaattctatcatgagtggaatatgcctttcc 33940973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 18363171 - 18362930
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18363171 acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 18363072  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  18363071 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct 18362972  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  18362971 cagaatttttctaattctatcatgagtggaatatgcctttcc 18362930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 20949734 - 20949508
Alignment:
Q  36 actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 135  Q
    ||||||||  |||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20949734 actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 20949635  T
Q  136 tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat 235  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  20949634 tgagatcttccaggttcatagatttcaaatccttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat 20949535  T
Q  236 tctatcatgagtagaatatgcctttcc 262  Q
    ||| |||||||| |||||||| |||||    
T  20949534 tctctcatgagtggaatatgcttttcc 20949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 37 - 254
Target Start/End: Original strand, 23375368 - 23375577
Alignment:
Q  37 ctgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaat 136  Q
    |||||||| |||| |||||||||||||||| ||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  23375368 ctgatgaagtttgttgagatgctttcaaggaaagtgattttacctttttcactggtttgtctttttgaagtacaacttcatgagctctcagtgaaccaat 23375467  T
Q  137 gagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaatt 236  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||    |||||||| ||||||||||||     ||||||| ||||||||| |||    
T  23375468 gagatcttcaaggttcatagattttaaatctttggcctgagtaattgca---tccataggtctccacatacttg-----catctcaatatttttctgatt 23375559  T
Q  237 ctatcatgagtagaatat 254  Q
    || |||||||| ||||||    
T  23375560 ctttcatgagtggaatat 23375577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 254
Target Start/End: Original strand, 22456358 - 22456523
Alignment:
Q  89 tggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtg 188  Q
    |||||||||| ||||||| | ||||||||||||||| ||||  |||||||||||||| |    ||  || |||||||||||||| ||||||||| | ||     
T  22456358 tggtttgtcttcttgaagcaaaacttcatgagctcttagtgttccaatgagatcttctaaagccaaggaatttaaatctttggcttgagtgatttctgta 22456457  T
Q  189 accataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatat 254  Q
    ||||||||| |||| ||| | ||||||||||| | ||||||||| ||||| ||||||| |||||||    
T  22456458 accataggtctccatatattaggaagacatcttaatatttttctgattctgtcatgaggagaatat 22456523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 246
Target Start/End: Complemental strand, 20037526 - 20037353
Alignment:
Q  73 tttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggc 172  Q
    ||||| |||| ||||| ||||| ||| |||| |||| ||||||||||||||| ||||  |||||||||| ||| |    ||  || |||| ||| |||||    
T  20037526 tttttccctttttcaccggtttatcttcttggagtagaacttcatgagctctaagtgttccaatgagattttctaaagccaaggaatttagatcgttggc 20037427  T
Q  173 ctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag 246  Q
     ||||||||||  || ||||||||| ||||| |  |||| |||||||| | ||||||||| ||||| |||||||    
T  20037426 ttgagtgattgttgtaaccataggtctccacgtgtttgggagacatcttaatatttttctgattctgtcatgag 20037353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 24299175 - 24299262
Alignment:
Q  159 tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag 246  Q
    ||||| |||||||| ||||||||||| || ||||||||| ||||  || |||| |||||||| | ||||||||| ||||| |||||||    
T  24299175 tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag 24299262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 5601928 - 5601840
Alignment:
Q  165 tctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaata 253  Q
    ||||| || ||||||||||| || ||||| ||| ||||   | ||||||||||||| ||||||||||| ||||| || || ||||||||    
T  5601928 tctttagcttgagtgattgccgtaaccatgggtctccattgagttggaagacatcttagtatttttcttattctgtcgtgggtagaata 5601840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 45016247 - 45016006
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| |||||||||| |||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45016247 acatcatcatcagcaactgatgagcttgactgagatgcttttaaggcaagtgtttttaccttctttactggtttgtctccttgaagtacaacttcatgag 45016148  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45016147 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 45016048  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  45016047 cagtatttttctaattctatcatgagtagaatatgcatttcc 45016006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 9512211 - 9512452
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  9512211 acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag 9512310  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9512311 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 9512410  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  9512411 cagaatttttctaattctatcatgagtggaatatgcctttcc 9512452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 18653112 - 18652871
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  18653112 acatcttcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgag 18653013  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18653012 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 18652913  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  18652912 cagaatttttctaattctatcatgagtggaatatgcctttcc 18652871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 36 - 262
Target Start/End: Original strand, 27168448 - 27168674
Alignment:
Q  36 actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 135  Q
    ||||||||  |||||||||| ||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27168448 actgatgaggtttgctgagaggctttcaaggcaagtgactttactttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 27168547  T
Q  136 tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  27168548 tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat 27168647  T
Q  236 tctatcatgagtagaatatgcctttcc 262  Q
    ||| |||||||| |||||||| |||||    
T  27168648 tctctcatgagtggaatatgcttttcc 27168674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 22904033 - 22903792
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||| ||| | ||||||||  |||||||||| ||||| ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  22904033 acatcatcttcagctactgatgaggtttgctgagaggcttttaaggcaagtgactttaccttcttcattggtttgtctccttgaagtacaacttcatgag 22903934  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||||||||||| || ||    
T  22903933 ctctcagtgaaccaatgagatcttccaagttcatagatttcaaatctttggcctgagtaattgcagttaccataggtctccacatacttggaaggcaact 22903834  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    || ||||||||| ||| | ||||||||  |||||| ||||||    
T  22903833 caatatttttctgattatctcatgagtgaaatatgtctttcc 22903792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 1792304 - 1792216
Alignment:
Q  165 tctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaata 253  Q
    ||||| || ||||||||||| || ||||| ||| ||||   | ||||||||||||| ||||||||||| ||||| || || ||||||||    
T  1792304 tctttagcttgagtgattgccgtaaccatgggtctccattgagttggaagacatcttagtatttttcttattctgtcgtgggtagaata 1792216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 31359455 - 31359214
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31359455 acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 31359356  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31359355 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 31359256  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  31359255 cagaatttttctaattctatcatgagtggaatatgcctttcc 31359214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 16899840 - 16899599
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16899840 acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 16899741  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  16899740 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct 16899641  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  16899640 cagaatttttctaattctatcatgagttgaatatgcctttcc 16899599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 18161959 - 18161718
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18161959 acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 18161860  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  18161859 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct 18161760  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  18161759 cagaatttttctaattctatcatgagtggaatatgcctttcc 18161718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 34767235 - 34767009
Alignment:
Q  36 actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 135  Q
    ||||||||  |||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34767235 actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 34767136  T
Q  136 tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  34767135 tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat 34767036  T
Q  236 tctatcatgagtagaatatgcctttcc 262  Q
    ||| |||||||| |||||||| |||||    
T  34767035 tctctcatgagtggaatatgcttttcc 34767009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 18704490 - 18704731
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | ||| ||||  |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  18704490 acatcatcatcagctacttatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactgggttgtctccttgaagtacaactgcatgag 18704589  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  18704590 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttggaagacatct 18704689  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
     || || ||||| ||||| |||||||| |||||| |||||||    
T  18704690 tagaatctttctgattctctcatgagtggaatattcctttcc 18704731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 18710425 - 18710666
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | ||| ||||  |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  18710425 acatcatcatcagctacttatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactgggttgtctccttgaagtacaactgcatgag 18710524  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  18710525 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttggaagacatct 18710624  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
     || || ||||| ||||| |||||||| |||||| |||||||    
T  18710625 tagaatctttctgattctctcatgagtggaatattcctttcc 18710666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 220
Target Start/End: Complemental strand, 29561320 - 29561121
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | ||||||||  ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  29561320 acatcatcatcagctactgatgaggtttgctgagatgctttcaaagcaagtgtttttacattcttcactggtttatctccttgaagtacgacttcatgag 29561221  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||  ||||||||| ||   |||| ||||| |||||||||    
T  29561220 ctcttagtgaaccaatgagatctttcaggttcatagattttaaatctttggcctaagtaattgttgtgaccatatgtcctcacacacttgaaagacatct 29561121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 25895891 - 25895804
Alignment:
Q  159 tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag 246  Q
    ||||| |||||||| ||||||||||| || ||||||||| ||||  || |||| |||||||| | ||||||||| ||||| |||||||    
T  25895891 tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag 25895804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 29542147 - 29542100
Alignment:
Q  215 acatctcagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    |||||| | ||||||||| |||||||||||||| ||||||||||||||    
T  29542147 acatcttaatatttttctgattctatcatgagtggaatatgcctttcc 29542100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 9539029 - 9538788
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9539029 acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgag 9538930  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9538929 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatct 9538830  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  9538829 cagaatttttctaattctatcatgagtggaatatgcctttcc 9538788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 6424201 - 6423960
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6424201 acatcttcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 6424102  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||    
T  6424101 ctcttagtgaaccaatgagatcttccaggtttatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacacct 6424002  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  6424001 cagtatttttctaattctatcatgagtagaatatgcatttcc 6423960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 8974740 - 8974499
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8974740 acatcttcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtctttaccttcttcactggtttgtctccttgaagtacaacttcatgag 8974641  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  8974640 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct 8974541  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    ||| ||||||||||||||||||||||| ||||||||||||||    
T  8974540 cagaatttttctaattctatcatgagtggaatatgcctttcc 8974499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 12387802 - 12387640
Alignment:
Q  100 cttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgt 199  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||| ||||| ||| |||||||| |||||||||||||||||| |    
T  12387802 cttgaagtacaacttcatgagctatcagtgaatcaatgagatcttccaagttcatatattgtaaatatttagcctgagtaattgcagtgaccataggtct 12387703  T
Q  200 ccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
     | |||||||||||| ||||||| ||||||||| | ||| |||| ||| ||||||||||||||    
T  12387702 tcgcatacttggaaggcatctcaatatttttctgactctctcataagtggaatatgcctttcc 12387640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 48980022 - 48979934
Alignment:
Q  165 tctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaata 253  Q
    ||||| || ||||||||||| || ||||| ||| ||||   | ||||||||||||| ||||||||||| ||||| || || ||||||||    
T  48980022 tctttagcttgagtgattgccgtaaccatgggtctccattgagttggaagacatcttagtatttttcttattctgtcgtgggtagaata 48979934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 16156777 - 16156536
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    ||||| |||||| |||||||||   ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16156777 acatcttcatcagcaactgatggggtttgctgagatgctttcaaagcaggtgtttttaccttcttcactggtttgtctcgttgaagtacaacttcatgag 16156678  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  16156677 ctcttagtgaaccaatgagatcttccaggttcatagattttaaatcttttgcctgagtgattgcagtgaccataggtctccacacacttggaagacatct 16156578  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  16156577 cagtatttttctaattttatcatgagtagaatatgcctttcc 16156536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 36 - 262
Target Start/End: Original strand, 1987651 - 1987877
Alignment:
Q  36 actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 135  Q
    ||||||||  |||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1987651 actgatgagatttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctcttagtgaaccaa 1987750  T
Q  136 tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat 235  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||| ||    
T  1987751 tgagatcttccagattcatagatttcaaatctttggcctgagtgatttcagtgaccataggtctccacatacttggaagtcatctcaatatttttctgat 1987850  T
Q  236 tctatcatgagtagaatatgcctttcc 262  Q
    ||| |||||||| |||||||| |||||    
T  1987851 tctctcatgagtggaatatgcttttcc 1987877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 51 - 247
Target Start/End: Complemental strand, 22960190 - 22959995
Alignment:
Q  51 tgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggt 150  Q
    ||||| ||||| |||| ||||| |||||||||| |||||||||| ||||||| ||||| ||||||||||||||| ||||||||| |||| |||||||       
T  22960190 tgagaagcttttaaggtaagtgattttaccttcctcactggtttatctccttaaagtataacttcatgagctcttagtgaacca-tgagttcttccaaag 22960092  T
Q  151 tcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagt 247  Q
    ||| ||| |||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| ||||| || || ||||||||||||||    
T  22960091 tcaaagagtttaaatctttggcttgagtaattgcagtgaccataggtctccatatacttggaagacatcttagtatcttcctgattctatcatgagt 22959995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 148602 - 148363
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | |||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  148602 acatcatcatcagctactgatgagctttgctgagatgctttcaaggtaagtgtttttactttcttcactggtttgtctccttgaagtacaacgtcatgag 148503  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  148502 ctctcagtgaaccaatgagatcctctaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatct 148403  T
Q  221 cagtatttttctaattctatcatgagtagaatatgccttt 260  Q
     | ||||||||| ||||||||||||||| |||||||||||    
T  148402 taatatttttctgattctatcatgagtataatatgccttt 148363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 23 - 232
Target Start/End: Complemental strand, 210 - 1
Alignment:
Q  23 atcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagct 122  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  210 atcatcatcagcaactgatgaactttgctgagatgctttcaaggaaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagct 111  T
Q  123 ctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctca 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||    
T  110 ctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctaagtaattgcagtgaccataggtctccaaatacttggaagacatctca 11  T
Q  223 gtatttttct 232  Q
     |||||||||    
T  10 atatttttct 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 36 - 262
Target Start/End: Original strand, 6030 - 6256
Alignment:
Q  36 actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 135  Q
    ||||||||  |||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6030 actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 6129  T
Q  136 tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  6130 tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat 6229  T
Q  236 tctatcatgagtagaatatgcctttcc 262  Q
    ||| |||||||| ||||||||||||||    
T  6230 tctctcatgagtggaatatgcctttcc 6256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 262
Target Start/End: Original strand, 52979 - 53218
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | |||||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||    
T  52979 acatcatcatcagctactgatgagctttgatgagatgctttcaaggcaagtgttttcaccttcttcactagtttgtctccttgaagtataacttcatgag 53078  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct 220  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  53079 ctctcagtgatccaatgagatcttcgaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccatatacttggaagacatct 53178  T
Q  221 cagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    |  ||||||||| |||||||||||||||||||||||||||||    
T  53179 c--tatttttctgattctatcatgagtagaatatgcctttcc 53218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 175; Significance: 3e-94; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 7648 - 7422
Alignment:
Q  36 actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 135  Q
    ||||||||  |||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7648 actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 7549  T
Q  136 tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  7548 tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat 7449  T
Q  236 tctatcatgagtagaatatgcctttcc 262  Q
    ||| |||||||| |||||||| |||||    
T  7448 tctctcatgagtggaatatgcttttcc 7422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 36 - 262
Target Start/End: Complemental strand, 11430 - 11204
Alignment:
Q  36 actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 135  Q
    ||||||||  |||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11430 actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa 11331  T
Q  136 tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  11330 tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat 11231  T
Q  236 tctatcatgagtagaatatgcctttcc 262  Q
    ||| |||||||| |||||||| |||||    
T  11230 tctctcatgagtggaatatgcttttcc 11204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 37 - 254
Target Start/End: Complemental strand, 17097 - 16888
Alignment:
Q  37 ctgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaat 136  Q
    |||||||| |||| |||||||||||||||| ||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  17097 ctgatgaagtttgttgagatgctttcaaggaaagtgattttacctttttcactggtttgtctttttgaagtacaacttcatgagctctcagtgaaccaat 16998  T
Q  137 gagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaatt 236  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||    |||||||| ||||||||||||     ||||||| ||||||||| |||    
T  16997 gagatcttcaaggttcatagattttaaatctttggcctgagtaattgca---tccataggtctccacatacttg-----catctcaatatttttctgatt 16906  T
Q  237 ctatcatgagtagaatat 254  Q
    || |||||||| ||||||    
T  16905 ctttcatgagtggaatat 16888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 190
Target Start/End: Complemental strand, 27839 - 27670
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | ||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  27839 acatcatcatcagctactgatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtataacttcatgag 27740  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgac 190  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  |||||| |||| ||||||    
T  27739 ctctcaatgaaccaatgagatcttccaggttcatagattttaaatctttgatctgagtaattgtagtgac 27670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 20506 - 20428
Alignment:
Q  184 cagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatatgcctttcc 262  Q
    |||||||||||||| ||||||| |||||||||||||| || || ||||| ||||| |||||||| ||||||||||||||    
T  20506 cagtgaccataggtctccacattcttggaagacatcttagaatctttctgattctctcatgagtggaatatgcctttcc 20428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 86973 - 87142
Alignment:
Q  21 acatcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgag 120  Q
    |||||||||||| | ||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  86973 acatcatcatcagctactgatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtataacttcatgag 87072  T
Q  121 ctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgac 190  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  |||||| |||| ||||||    
T  87073 ctctcaatgaaccaatgagatcttccaggttcatagattttaaatctttgatctgagtaattgtagtgac 87142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 247
Target Start/End: Original strand, 189005 - 189200
Alignment:
Q  51 tgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggt 150  Q
    ||||| ||||| |||||||||| |||||||||  ||| |||||| ||||||| ||||| ||||||||||||||| ||||||||| ||||  ||||||       
T  189005 tgagaagcttttaaggcaagtgattttacctttctcattggtttatctccttaaagtataacttcatgagctcttagtgaacca-tgagtacttccaaag 189103  T
Q  151 tcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagt 247  Q
    ||| ||| |||||||||||||| ||||| |||||||||||||||||  ||||  |||||||||||||||| ||||| || |||||||||||||||||    
T  189104 tcaaagagtttaaatctttggcttgagtaattgcagtgaccataggcctccatgtacttggaagacatcttagtatcttcctaattctatcatgagt 189200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 290 - 179
Alignment:
Q  150 ttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtag 249  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||| |    
T  290 ttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcattatttttcttattctttcatgagtgg 191  T
Q  250 aatatgcctttc 261  Q
    ||||||| ||||    
T  190 aatatgcttttc 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 258253 - 258166
Alignment:
Q  159 tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag 246  Q
    ||||| |||||||| ||||||||||| || ||||||||| ||||  |  |||| |||||||| | ||||||||| ||||| |||||||    
T  258253 tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtttttgggagacatcttaatatttttctgattctgtcatgag 258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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