View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0403_high_46 (Length: 209)
Name: NF0403_high_46
Description: NF0403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0403_high_46 |
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Alignment Details
Target: chr8 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 8 - 160
Target Start/End: Complemental strand, 37571974 - 37571822
Alignment:
| Q |
8 |
aaattcggttgaccgggagaacccgtattgttactgctatgcggatattagttactgctaaacggcaatgaaaacttcctatttataacatggtaaccnn |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
37571974 |
aaattcggttgaccgggagaacccgtattgttactgctatgcggatattagttactgctaaacagcaatgaaaacttcctatttataacatggtaaccaa |
37571875 |
T |
|
| Q |
108 |
nnnnntctaaaactattgtaattaaacaatgatcacaaactaattggtgtaaa |
160 |
Q |
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|||||||||||||| |||||||| |||||||||||||||||||||||| |
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| T |
37571874 |
aaaaatctaaaactattgtgattaaacagtgatcacaaactaattggtgtaaa |
37571822 |
T |
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