View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0403_low_14 (Length: 412)
Name: NF0403_low_14
Description: NF0403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0403_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 21 - 320
Target Start/End: Original strand, 35422426 - 35422726
Alignment:
| Q |
21 |
ctaatatacaaaaccgaaagtgcaggcatcaggaacttcacctttaaagccaatatatgttcataagccaacaaaagcaactaaaagttagtcctatctt |
120 |
Q |
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| T |
35422426 |
ctaatatacaaaaccgaaagtgcaggcatcaggaacttcacctttaaagccaatatatgttcataagccaacaaaagcaaccgaaagttagtcctatctt |
35422525 |
T |
|
| Q |
121 |
ggaagatatgttacatttgtgatttattgatttt-aagaactacataaatcataagtttgacaatgatgtgttgagattaaagggaatacagatagatta |
219 |
Q |
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| T |
35422526 |
ggaagatatgttacatttgtgatttattgatttttaagaactacataaatcataagtttgacgatgatgtgttgagattaaagggaatacagatagatta |
35422625 |
T |
|
| Q |
220 |
tgctgtgaattgttttgtcattaacaaattgtcacagtccttattaccgttaaacttccccatcctattaaattttgaacgatatacgttattctcatag |
319 |
Q |
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|| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35422626 |
tgatgtgaattgttttgtcattaacaaattgtcatagtccttattaccgttaaacttccccatcctattaaattttgaacgatatacgttattctcatag |
35422725 |
T |
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| Q |
320 |
c |
320 |
Q |
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| T |
35422726 |
c |
35422726 |
T |
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