View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0405_low_3 (Length: 318)

Name: NF0405_low_3
Description: NF0405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0405_low_3
NF0405_low_3
[»] chr4 (69 HSPs)
chr4 (50-310)||(32339570-32339830)
chr4 (78-168)||(40018228-40018318)
chr4 (50-164)||(37042675-37042789)
chr4 (78-164)||(38903757-38903843)
chr4 (50-147)||(40932935-40933032)
chr4 (50-157)||(22420728-22420835)
chr4 (79-164)||(47147530-47147613)
chr4 (50-193)||(31339651-31339795)
chr4 (57-145)||(47372827-47372915)
chr4 (50-144)||(49686870-49686964)
chr4 (50-166)||(49738561-49738677)
chr4 (78-141)||(29801559-29801622)
chr4 (78-161)||(41192221-41192304)
chr4 (53-164)||(42639034-42639145)
chr4 (97-171)||(934489-934563)
chr4 (76-162)||(6843774-6843860)
chr4 (50-164)||(25755473-25755587)
chr4 (50-164)||(26024861-26024975)
chr4 (79-164)||(44686611-44686695)
chr4 (78-164)||(7681949-7682035)
chr4 (78-164)||(18966762-18966848)
chr4 (78-168)||(31403073-31403163)
chr4 (78-163)||(25574982-25575067)
chr4 (78-143)||(29209214-29209279)
chr4 (79-164)||(44667286-44667370)
chr4 (50-147)||(54470381-54470478)
chr4 (50-118)||(8284342-8284410)
chr4 (50-114)||(45209216-45209280)
chr4 (50-164)||(2557682-2557797)
chr4 (78-157)||(20105557-20105636)
chr4 (106-164)||(21879220-21879279)
chr4 (179-286)||(33709947-33710054)
chr4 (50-141)||(44719372-44719463)
chr4 (50-161)||(55388222-55388333)
chr4 (78-164)||(30853500-30853586)
chr4 (82-164)||(51841241-51841323)
chr4 (50-160)||(55007907-55008017)
chr4 (50-119)||(6957800-6957869)
chr4 (55-164)||(8598957-8599066)
chr4 (115-164)||(45569085-45569134)
chr4 (86-147)||(48154894-48154955)
chr4 (86-147)||(55028995-55029056)
chr4 (50-114)||(3979127-3979191)
chr4 (50-114)||(31959825-31959889)
chr4 (50-114)||(52569526-52569590)
chr4 (51-114)||(4441060-4441123)
chr4 (183-266)||(31961422-31961505)
chr4 (78-140)||(7970420-7970482)
chr4 (78-164)||(20999157-20999243)
chr4 (50-112)||(27450191-27450253)
chr4 (107-169)||(29182604-29182666)
chr4 (50-112)||(34585691-34585753)
chr4 (50-92)||(38017318-38017360)
chr4 (78-168)||(39761367-39761457)
chr4 (106-164)||(42293332-42293390)
chr4 (78-147)||(2589246-2589315)
chr4 (51-112)||(13262421-13262482)
chr4 (50-111)||(43434134-43434195)
chr4 (50-114)||(436436-436500)
chr4 (50-114)||(1777028-1777092)
chr4 (50-114)||(19061946-19062010)
chr4 (108-164)||(20047592-20047648)
chr4 (108-164)||(26024988-26025044)
chr4 (50-146)||(34208280-34208376)
chr4 (50-114)||(35690478-35690542)
chr4 (50-110)||(47372915-47372975)
chr4 (50-114)||(48622554-48622618)
chr4 (52-112)||(49939747-49939807)
chr4 (82-114)||(56200153-56200185)
[»] chr2 (57 HSPs)
chr2 (50-164)||(8197552-8197666)
chr2 (50-164)||(8202312-8202426)
chr2 (50-164)||(3305820-3305934)
chr2 (51-164)||(19234996-19235109)
chr2 (52-164)||(37470146-37470258)
chr2 (50-164)||(33504380-33504495)
chr2 (82-164)||(2906036-2906118)
chr2 (50-164)||(19336904-19337018)
chr2 (50-164)||(38435109-38435223)
chr2 (50-147)||(32402674-32402771)
chr2 (76-171)||(37481654-37481749)
chr2 (50-164)||(9556380-9556494)
chr2 (50-188)||(13240774-13240912)
chr2 (50-164)||(19024335-19024449)
chr2 (78-164)||(42092674-42092760)
chr2 (78-164)||(43832255-43832341)
chr2 (55-128)||(29159286-29159359)
chr2 (56-164)||(1626352-1626460)
chr2 (96-164)||(31254445-31254513)
chr2 (55-146)||(15836115-15836206)
chr2 (184-267)||(43260446-43260529)
chr2 (79-141)||(1303468-1303530)
chr2 (50-164)||(9496023-9496137)
chr2 (50-164)||(26670925-26671039)
chr2 (50-164)||(28960222-28960336)
chr2 (50-164)||(33287578-33287692)
chr2 (98-164)||(33625257-33625323)
chr2 (94-164)||(42149715-42149785)
chr2 (107-160)||(41779178-41779231)
chr2 (50-114)||(227396-227460)
chr2 (50-114)||(7326171-7326235)
chr2 (50-114)||(12474938-12475002)
chr2 (50-114)||(28508885-28508949)
chr2 (50-114)||(30306239-30306303)
chr2 (78-141)||(3481334-3481397)
chr2 (72-111)||(6841484-6841523)
chr2 (81-164)||(23915735-23915818)
chr2 (50-112)||(3635334-3635396)
chr2 (53-171)||(6230278-6230396)
chr2 (78-164)||(12141701-12141787)
chr2 (50-164)||(12882056-12882170)
chr2 (50-112)||(15025703-15025765)
chr2 (78-164)||(26784379-26784465)
chr2 (50-112)||(41197238-41197300)
chr2 (50-140)||(43573141-43573231)
chr2 (50-111)||(4807805-4807866)
chr2 (78-164)||(8491276-8491364)
chr2 (115-164)||(12026081-12026130)
chr2 (50-135)||(12734886-12734971)
chr2 (50-135)||(25834864-25834949)
chr2 (193-286)||(42092540-42092633)
chr2 (50-114)||(451659-451723)
chr2 (94-209)||(2377164-2377280)
chr2 (50-114)||(3243664-3243728)
chr2 (50-114)||(9531611-9531675)
chr2 (50-121)||(10516760-10516831)
chr2 (78-146)||(19015914-19015982)
[»] chr1 (65 HSPs)
chr1 (78-286)||(5338747-5338956)
chr1 (79-283)||(13827620-13827826)
chr1 (78-286)||(38868905-38869125)
chr1 (56-147)||(6025779-6025870)
chr1 (50-165)||(50636237-50636352)
chr1 (50-143)||(38877354-38877447)
chr1 (50-145)||(30396740-30396835)
chr1 (50-249)||(33560869-33561080)
chr1 (79-164)||(15577575-15577660)
chr1 (50-147)||(52073059-52073156)
chr1 (56-160)||(42501269-42501373)
chr1 (78-188)||(109032-109143)
chr1 (54-169)||(4590547-4590662)
chr1 (50-286)||(10569082-10569326)
chr1 (76-147)||(40920566-40920637)
chr1 (50-164)||(3818867-3818981)
chr1 (50-164)||(8796366-8796480)
chr1 (50-132)||(49377490-49377572)
chr1 (56-164)||(16822038-16822145)
chr1 (110-169)||(10584968-10585027)
chr1 (78-193)||(17233810-17233925)
chr1 (79-167)||(37591148-37591234)
chr1 (79-164)||(853825-853910)
chr1 (76-121)||(16943355-16943400)
chr1 (97-210)||(52160301-52160419)
chr1 (78-122)||(39525964-39526008)
chr1 (50-146)||(41560404-41560500)
chr1 (88-147)||(52482431-52482490)
chr1 (78-164)||(7124298-7124384)
chr1 (78-164)||(8203173-8203259)
chr1 (55-169)||(17640083-17640197)
chr1 (78-164)||(17815636-17815722)
chr1 (79-169)||(30017092-30017182)
chr1 (56-249)||(43375615-43375809)
chr1 (78-164)||(43934369-43934455)
chr1 (50-135)||(25979242-25979327)
chr1 (50-114)||(1210952-1211016)
chr1 (50-146)||(6084150-6084246)
chr1 (78-146)||(27072526-27072594)
chr1 (50-114)||(29577459-29577523)
chr1 (50-114)||(30202141-30202205)
chr1 (50-110)||(39797212-39797272)
chr1 (50-114)||(40568421-40568485)
chr1 (50-114)||(49347404-49347468)
chr1 (50-114)||(51602263-51602327)
chr1 (85-132)||(2545145-2545192)
chr1 (86-164)||(12135864-12135943)
chr1 (115-162)||(12231524-12231571)
chr1 (56-131)||(22319856-22319931)
chr1 (97-164)||(40416528-40416595)
chr1 (55-147)||(48861391-48861485)
chr1 (78-164)||(9599433-9599519)
chr1 (78-164)||(28528512-28528598)
chr1 (78-164)||(39515907-39515993)
chr1 (158-267)||(2544641-2544749)
chr1 (50-135)||(15086108-15086193)
chr1 (50-95)||(52814305-52814350)
chr1 (50-146)||(19908046-19908142)
chr1 (50-114)||(28090705-28090769)
chr1 (50-114)||(34792360-34792424)
chr1 (50-110)||(37462887-37462947)
chr1 (50-138)||(38807682-38807770)
chr1 (50-114)||(42337763-42337827)
chr1 (50-114)||(44941787-44941851)
chr1 (50-114)||(52921287-52921351)
[»] chr3 (48 HSPs)
chr3 (82-164)||(37228239-37228321)
chr3 (50-164)||(46431690-46431804)
chr3 (78-286)||(36304002-36304209)
chr3 (76-164)||(37598207-37598295)
chr3 (50-164)||(21427595-21427707)
chr3 (78-164)||(43308719-43308805)
chr3 (81-158)||(55244441-55244518)
chr3 (82-164)||(37228085-37228167)
chr3 (78-147)||(46367426-46367495)
chr3 (81-164)||(2340759-2340842)
chr3 (79-208)||(39535440-39535570)
chr3 (51-145)||(41971283-41971376)
chr3 (50-143)||(659703-659796)
chr3 (76-164)||(23534607-23534695)
chr3 (59-168)||(29337587-29337698)
chr3 (54-164)||(29475843-29475953)
chr3 (78-164)||(49841773-49841859)
chr3 (51-164)||(27893246-27893359)
chr3 (79-164)||(41425378-41425463)
chr3 (78-146)||(11284163-11284231)
chr3 (77-145)||(32052433-32052501)
chr3 (81-132)||(5852346-5852397)
chr3 (50-169)||(19758039-19758157)
chr3 (51-111)||(7942864-7942924)
chr3 (50-114)||(12096716-12096780)
chr3 (80-171)||(21200698-21200787)
chr3 (50-114)||(47555343-47555407)
chr3 (81-207)||(47789003-47789135)
chr3 (96-164)||(47804720-47804788)
chr3 (51-147)||(6988075-6988172)
chr3 (50-141)||(21862752-21862843)
chr3 (190-249)||(33307188-33307247)
chr3 (78-165)||(50237673-50237760)
chr3 (50-112)||(5169041-5169103)
chr3 (94-164)||(8476067-8476137)
chr3 (86-164)||(34719127-34719205)
chr3 (50-164)||(45289102-45289216)
chr3 (51-132)||(7278653-7278734)
chr3 (115-164)||(41452816-41452865)
chr3 (50-135)||(48508421-48508506)
chr3 (50-103)||(49503579-49503632)
chr3 (50-134)||(311320-311404)
chr3 (50-146)||(388273-388369)
chr3 (50-114)||(2133623-2133687)
chr3 (50-114)||(7895891-7895955)
chr3 (76-168)||(41842560-41842652)
chr3 (94-142)||(42026591-42026639)
chr3 (50-114)||(54128586-54128650)
[»] scaffold0180 (1 HSPs)
scaffold0180 (50-169)||(25454-25574)
[»] chr8 (48 HSPs)
chr8 (55-164)||(3645243-3645352)
chr8 (50-147)||(12611671-12611768)
chr8 (79-164)||(23023382-23023467)
chr8 (50-147)||(26055595-26055692)
chr8 (108-208)||(38689769-38689869)
chr8 (51-163)||(39760447-39760558)
chr8 (97-164)||(10108970-10109037)
chr8 (78-160)||(25117446-25117528)
chr8 (78-164)||(39967538-39967624)
chr8 (79-164)||(79184-79269)
chr8 (50-171)||(23492184-23492305)
chr8 (79-147)||(37826461-37826529)
chr8 (105-168)||(10079973-10080036)
chr8 (50-145)||(16715449-16715544)
chr8 (50-164)||(39388940-39389057)
chr8 (82-164)||(11733904-11733986)
chr8 (110-164)||(38178331-38178385)
chr8 (50-163)||(12692251-12692364)
chr8 (50-146)||(490510-490606)
chr8 (81-164)||(27037792-27037875)
chr8 (78-143)||(30748641-30748706)
chr8 (50-114)||(11523734-11523798)
chr8 (78-146)||(21425221-21425289)
chr8 (78-146)||(29520824-29520892)
chr8 (80-164)||(38391934-38392018)
chr8 (98-286)||(41971849-41972037)
chr8 (78-146)||(43904704-43904772)
chr8 (158-249)||(5908706-5908797)
chr8 (50-169)||(6483447-6483566)
chr8 (51-114)||(12491150-12491213)
chr8 (94-164)||(16705904-16705975)
chr8 (119-162)||(33666650-33666693)
chr8 (158-249)||(35914732-35914823)
chr8 (87-158)||(44175275-44175346)
chr8 (50-112)||(14742093-14742155)
chr8 (78-164)||(17491693-17491779)
chr8 (50-144)||(30198277-30198371)
chr8 (50-111)||(1928598-1928659)
chr8 (105-146)||(16917358-16917399)
chr8 (50-111)||(43733416-43733477)
chr8 (79-147)||(1549431-1549499)
chr8 (50-114)||(3464182-3464246)
chr8 (80-164)||(4011240-4011324)
chr8 (50-114)||(25473414-25473478)
chr8 (159-267)||(29700318-29700426)
chr8 (50-114)||(36545356-36545420)
chr8 (50-114)||(44529432-44529496)
chr8 (50-114)||(45419442-45419506)
[»] chr7 (55 HSPs)
chr7 (55-164)||(41483644-41483753)
chr7 (78-286)||(40008470-40008676)
chr7 (50-164)||(12966173-12966287)
chr7 (78-164)||(40138987-40139073)
chr7 (79-164)||(19262498-19262583)
chr7 (50-147)||(30914513-30914610)
chr7 (50-160)||(36245267-36245376)
chr7 (51-164)||(28627945-28628058)
chr7 (50-222)||(27893574-27893746)
chr7 (50-197)||(36101788-36101935)
chr7 (78-164)||(22174157-22174243)
chr7 (50-116)||(22349825-22349891)
chr7 (78-164)||(24549728-24549813)
chr7 (78-164)||(36239835-36239921)
chr7 (50-123)||(475974-476046)
chr7 (78-135)||(6807390-6807447)
chr7 (105-166)||(41578189-41578250)
chr7 (78-146)||(7220931-7220999)
chr7 (76-163)||(1569174-1569261)
chr7 (78-169)||(28541983-28542074)
chr7 (50-101)||(31840450-31840501)
chr7 (50-164)||(45601633-45601747)
chr7 (91-161)||(9797758-9797828)
chr7 (50-112)||(38607201-38607263)
chr7 (78-164)||(40830359-40830444)
chr7 (180-249)||(30144835-30144904)
chr7 (50-114)||(6375075-6375139)
chr7 (50-114)||(11594167-11594231)
chr7 (50-114)||(12841286-12841350)
chr7 (50-114)||(21078124-21078188)
chr7 (50-114)||(28208339-28208403)
chr7 (112-164)||(29653619-29653671)
chr7 (50-114)||(31682613-31682677)
chr7 (50-114)||(34869627-34869691)
chr7 (50-114)||(35906212-35906276)
chr7 (50-114)||(39906383-39906447)
chr7 (129-267)||(25579178-25579317)
chr7 (105-164)||(28858202-28858261)
chr7 (52-135)||(45836495-45836578)
chr7 (90-128)||(15311113-15311151)
chr7 (110-160)||(25826553-25826603)
chr7 (118-164)||(30144932-30144978)
chr7 (52-114)||(36652199-36652261)
chr7 (79-161)||(42177058-42177140)
chr7 (190-267)||(5335962-5336039)
chr7 (50-135)||(40979939-40980024)
chr7 (158-267)||(47848716-47848825)
chr7 (50-114)||(4604754-4604818)
chr7 (78-162)||(5336077-5336161)
chr7 (50-114)||(24777168-24777232)
chr7 (50-110)||(28021146-28021206)
chr7 (158-285)||(28858068-28858196)
chr7 (50-146)||(34035165-34035261)
chr7 (50-114)||(37618152-37618216)
chr7 (50-114)||(40149024-40149088)
[»] chr5 (54 HSPs)
chr5 (77-169)||(28005687-28005783)
chr5 (50-135)||(15588401-15588486)
chr5 (79-164)||(27998598-27998683)
chr5 (50-135)||(30639310-30639395)
chr5 (78-146)||(18350941-18351009)
chr5 (50-164)||(28186793-28186900)
chr5 (76-143)||(41808100-41808167)
chr5 (78-164)||(12576899-12576985)
chr5 (50-164)||(43475396-43475510)
chr5 (51-164)||(9235204-9235316)
chr5 (50-119)||(20456975-20457044)
chr5 (50-147)||(36123193-36123290)
chr5 (77-164)||(38684637-38684724)
chr5 (86-164)||(14749464-14749542)
chr5 (50-135)||(2645176-2645261)
chr5 (158-267)||(2712986-2713095)
chr5 (50-135)||(38685153-38685238)
chr5 (78-147)||(39128236-39128305)
chr5 (80-164)||(2066154-2066238)
chr5 (50-114)||(2915507-2915571)
chr5 (114-162)||(4460366-4460414)
chr5 (50-114)||(29816589-29816653)
chr5 (50-114)||(30213782-30213846)
chr5 (53-121)||(41200360-41200428)
chr5 (55-146)||(5303619-5303713)
chr5 (158-249)||(14749367-14749458)
chr5 (102-169)||(27249358-27249425)
chr5 (156-267)||(31636049-31636160)
chr5 (50-112)||(11002432-11002494)
chr5 (50-164)||(13141710-13141824)
chr5 (50-112)||(13561397-13561459)
chr5 (56-158)||(30588610-30588712)
chr5 (119-169)||(39322146-39322196)
chr5 (50-147)||(3442882-3442979)
chr5 (50-146)||(11675704-11675801)
chr5 (50-143)||(15252755-15252848)
chr5 (158-267)||(21952399-21952508)
chr5 (200-249)||(38684540-38684589)
chr5 (50-110)||(408505-408565)
chr5 (78-146)||(418073-418141)
chr5 (50-114)||(2075484-2075548)
chr5 (50-114)||(4496591-4496655)
chr5 (50-114)||(5860041-5860105)
chr5 (115-171)||(9917526-9917582)
chr5 (156-248)||(9917579-9917671)
chr5 (50-114)||(10639509-10639573)
chr5 (50-114)||(12492395-12492459)
chr5 (78-146)||(14911347-14911415)
chr5 (113-149)||(22576181-22576217)
chr5 (50-114)||(28276445-28276509)
chr5 (50-114)||(28976870-28976934)
chr5 (55-111)||(32442141-32442197)
chr5 (50-114)||(38132543-38132607)
chr5 (50-114)||(42576217-42576281)
[»] chr6 (31 HSPs)
chr6 (77-171)||(1747983-1748077)
chr6 (50-285)||(6293403-6293644)
chr6 (85-164)||(33997590-33997669)
chr6 (78-164)||(34544-34630)
chr6 (78-141)||(32945428-32945491)
chr6 (85-143)||(3963967-3964025)
chr6 (78-160)||(7150350-7150432)
chr6 (79-141)||(26676373-26676435)
chr6 (79-141)||(26677553-26677615)
chr6 (50-112)||(30789085-30789147)
chr6 (78-147)||(3210547-3210616)
chr6 (50-114)||(34143776-34143840)
chr6 (50-114)||(34156392-34156456)
chr6 (96-164)||(35199680-35199747)
chr6 (161-228)||(1747775-1747842)
chr6 (50-133)||(4245883-4245966)
chr6 (88-147)||(32515390-32515449)
chr6 (54-140)||(5096015-5096101)
chr6 (78-168)||(7267424-7267514)
chr6 (118-204)||(9749315-9749401)
chr6 (82-116)||(12237861-12237895)
chr6 (110-147)||(1747712-1747749)
chr6 (78-162)||(6906866-6906951)
chr6 (50-122)||(5897656-5897728)
chr6 (50-146)||(9706945-9707041)
chr6 (50-114)||(12890782-12890846)
chr6 (162-262)||(21870200-21870300)
chr6 (50-114)||(28085583-28085647)
chr6 (50-114)||(31819038-31819102)
chr6 (50-114)||(32756128-32756192)
chr6 (50-114)||(34934841-34934905)
[»] scaffold0373 (1 HSPs)
scaffold0373 (76-162)||(2338-2424)
[»] scaffold0392 (1 HSPs)
scaffold0392 (50-131)||(6783-6864)
[»] scaffold1318 (1 HSPs)
scaffold1318 (50-114)||(538-602)
[»] scaffold0168 (1 HSPs)
scaffold0168 (50-114)||(28900-28964)
[»] scaffold0041 (1 HSPs)
scaffold0041 (50-112)||(16787-16849)
[»] scaffold0050 (1 HSPs)
scaffold0050 (51-124)||(58238-58311)
[»] scaffold0187 (1 HSPs)
scaffold0187 (97-141)||(2943-2987)


Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 50 - 310
Target Start/End: Complemental strand, 32339830 - 32339570
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339830 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 32339731  T
Q  150 atttcttaatagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctc 249  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32339730 atttcttaatagtttttctaattgttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctc 32339631  T
Q  250 cagatgcccaaatcaccttacctaagtttccaccatccaacacaatataattatctctgct 310  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32339630 cagatgcccaaatcacctaacctaagtttccaccatccaacacaatataattatctctgct 32339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 40018228 - 40018318
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttct 168  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| || |||||||| | |||||||| |||||||||    
T  40018228 ctacatggatcaaacgacgccgtaatgttctatcatatatcatatccctatccaactcattgatctctagatctttcttaacagtttttct 40018318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 37042675 - 37042789
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  | | |||||||||||||||||| ||||||| |||||||| ||| | ||| ||||||||||||  |||||||||| |    
T  37042675 caagccttatcccactaagtcgggtcggctacatggatcaaacgacaccataatgttctatcaaataccgtatttctatccaactcaataatctctagat 37042774  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  37042775 ctttcttaatagttt 37042789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 38903757 - 38903843
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||||| |||||||| || | |||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||    
T  38903757 ctacatggatcaaacgatgccataatgttatgtcatatatcatatctctatcaaactcattaatctttaggtctttcttaatagttt 38903843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 40932935 - 40933032
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||||||||||| |||| |  | | ||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  40932935 caagccttatcccaccaagtggggtcggctacatgcatcaaacgccgccataatgttctatcatatatcatatccctatccaactcattaatctctag 40933032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 22420728 - 22420835
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  |  ||||||| |||||||| ||||||||||  |||||||| || |||||||||||||||||| ||||||||||| |    
T  22420728 caagccttatcccactaagtggggtcaactacatagatcaaacaacgccataatgctctatcatttaccatatctctatccaactcattaatctctagat 22420827  T
Q  150 atttctta 157  Q
     |||||||    
T  22420828 ctttctta 22420835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 47147613 - 47147530
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||| | |||||||| |||||||||||||||||  |||||||||||| ||||||||||| | ||||||||||||||    
T  47147613 tacatggatcaaacaatgccataatgttctatcatatatcata--tctatccaactcattaatctctagatctttcttaatagttt 47147530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 193
Target Start/End: Complemental strand, 31339795 - 31339651
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  | |  |||||||| ||||||||| |||||| ||||||||| || ||||| || ||||||||| ||||||||||| |    
T  31339795 caagccttatcccactaagtggggtcggatacatggaccaaacgacgtcataatgttctatcatgtaccatatttcgatccaactcattaatctctagat 31339696  T
Q  150 atttctta-atagtttttctaattcttcatctgtctctagagatt 193  Q
    | |||| | ||||||||||||  ||||| |||| |||||| ||||    
T  31339695 aattctcatatagtttttctaggtcttcctctgcctctagtgatt 31339651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 47372915 - 47372827
Alignment:
Q  57 tatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctct 145  Q
    ||||||||||||| | || | |||||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||| |||||||||    
T  47372915 tatcccactaagtgggatgggctacatggatcaaacgactccataatgttctataatataccatatttctatccaactcattaatctct 47372827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 49686964 - 49686870
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctc 144  Q
    |||| ||||||||||||||| |  | | |||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||| ||| ||||||||    
T  49686964 caagtcttatcccactaagtggggtcggctacatggttcaaacgacgccataatattccatcatatatcatatccctatccagctcattaatctc 49686870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 49738561 - 49738677
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||| | |  | | |||||||||||||||  ||||||||| |||| ||||||||| || | ||||||||||| ||||| ||||| |    
T  49738561 caagccttatcccactaaatggggtcggctacatggatcaaacaccgccataatgttctgtcatatatcctaaccctatccaactcattaatttctagat 49738660  T
Q  150 atttcttaatagttttt 166  Q
      |||||||||||||||    
T  49738661 ccttcttaatagttttt 49738677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 29801622 - 29801559
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaat 141  Q
    |||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||| |||||    
T  29801622 ctacatggatcaaacgacgccataattttcaatcatatatcatatttcaatccagctcattaat 29801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 41192304 - 41192221
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatag 161  Q
    ||||||||||| ||||| |||||||| ||||| |||||| ||||| |||||||||||| ||||||||||| | |||||| ||||    
T  41192304 ctacatggatcgaacgaagccataatgttctaccatataccatatttctatccaactcattaatctctagatctttctttatag 41192221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 42639034 - 42639145
Alignment:
Q  53 gccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatt 152  Q
    ||||||||||||||||  |  | | ||||||| || | ||||||||||||| |||||||| ||| ||||| |||||||||||| |||||| |||| | ||    
T  42639034 gccttatcccactaagcggggttggctacatgaattacacgacgccataatgttctatcaaataccatatttctatccaactcattaatcgctagatctt 42639133  T
Q  153 tcttaatagttt 164  Q
    ||||||||||||    
T  42639134 tcttaatagttt 42639145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 934489 - 934563
Alignment:
Q  97 ccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaat 171  Q
    ||||||| ||||||||||||||||| | ||||||||||| |||||||||||   |||||||||||||| ||||||    
T  934489 ccataatgttctatcatatatcataaccctatccaactcattaatctctagaactttcttaatagtttctctaat 934563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 6843860 - 6843774
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagt 162  Q
    ||||||||||||| ||| | |||||||| |||||| ||||| ||||| |||||| ||||| ||||||||||| | ||||||||||||    
T  6843860 gactacatggatccaacaatgccataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagt 6843774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 25755587 - 25755473
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||| ||| | | || |||| ||||||||||| ||| | ||||| |||||| |||||||||||| ||||||||||| |||||| | | ||    
T  25755587 caagccttatcccattaaatgggatcgacttcatggatcaaatgacactataatgttctatgatatatcatatccctatccaactcattaatccccaagt 25755488  T
Q  150 atttcttaatagttt 164  Q
     || |||||||||||    
T  25755487 cttacttaatagttt 25755473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 26024861 - 26024975
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||||||||||||    | | |||||||||| |||  || ||||||| |||||||||| | ||| |||| ||||||||| ||||||||||| |    
T  26024861 caagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcattaatctctagat 26024960  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  26024961 ctttcttaatagttt 26024975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 44686611 - 44686695
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||| ||| ||||||| ||||||| |||||||||||||||||| | || ||||||||||||||||||| | |||||| |||||||    
T  44686611 tacatagataaaacgacaccataatgttctatcatatatcatat-tttacccaactcgttaatctctagatttttcttgatagttt 44686695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 7681949 - 7682035
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||||| || ||||| | |||||||||| ||||| |||||| ||||| ||||||| ||| | |||||| |||||||    
T  7681949 ctacatggatcaaacgatgcaataatgtcctatcatataccatatttctatctaactcattaatctatagatttttcttgatagttt 7682035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 18966848 - 18966762
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||| |||||||| ||||||||| || | |||||||||||||||| ||||| |||  |||||| ||| | ||||||||||||||    
T  18966848 ctacatgaatcaaacggcgccataatgttttgtcatatatcatatctcaatccagctcactaatctgtagatctttcttaatagttt 18966762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 31403073 - 31403163
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttct 168  Q
    ||||||||||||| | || |||||||  ||||||||||| || || |||||||||||  ||||||||||| | |||| |||||||||||||    
T  31403073 ctacatggatcaagcaacaccataatgctctatcatataccacatttctatccaactaattaatctctagatctttcataatagtttttct 31403163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 25575067 - 25574982
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtt 163  Q
    ||||||||||||||  || ||| ||| |||||||||| | ||||| || ||||||||| ||||||||||| | |||||||||||||    
T  25575067 ctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 29209214 - 29209279
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatct 143  Q
    |||||| |||||||| ||||||||||  ||||||||||| ||||| |||||||||||| |||||||    
T  29209214 ctacattgatcaaacaacgccataatgctctatcatataccatatttctatccaactcattaatct 29209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 44667286 - 44667370
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||| ||| ||||||| ||| ||| |||||||||||||||||| | || ||||||||||||||||||| | |||||| |||||||    
T  44667286 tacatagataaaacgacaccaaaatgttctatcatatatcatat-tttacccaactcgttaatctctagatttttcttgatagttt 44667370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 54470478 - 54470381
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||| |||||||||||| |  | | |||||||||||||| ||||| |||||  ||  ||||||| ||||| |||||||||||| |||||||||||    
T  54470478 caagcctaatcccactaagtggggttggctacatggatcaaatgacgcaataatgctcagtcatataccatatttctatccaactcattaatctctag 54470381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 8284410 - 8284342
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatc 118  Q
    ||||||| |||||||||||||| || | ||| |||||||||| |||||||||||  |||||||||||||    
T  8284410 caagcctaatcccactaagtaggatcggctatatggatcaaatgacgccataatgatctatcatatatc 8284342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 45209216 - 45209280
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||||||||||| |||||||||| ||||||||||    
T  45209216 caagccttatcccactaagtggggtcggctacatggatcaaactacgccataatattctatcata 45209280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 2557682 - 2557797
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgcca-taattttctatcatatatcatatctctatccaactcgttaatctctagg 148  Q
    |||||||||||||||||| | || | | ||||||||||||||  || ||| |||| |||||||||| | ||||| || |||||||||||||||||  ||     
T  2557682 caagccttatcccactaaatggagttggctacatggatcaaattacaccaataatgttctatcataaaccatatttcgatccaactcgttaatcttcaga 2557781  T
Q  149 tatttcttaatagttt 164  Q
    |  |||||||||||||    
T  2557782 tccttcttaatagttt 2557797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 20105557 - 20105636
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttctta 157  Q
    |||||||||||||| ||||||||||| | |||||||||| ||||| ||  |||||||| | ||||||||| | |||||||    
T  20105557 ctacatggatcaaatgacgccataatgtcctatcatataccatatttcagtccaactcatcaatctctagatctttctta 20105636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 21879220 - 21879279
Alignment:
Q  106 tctatcatatatcatatctctatccaactcgttaatctctaggtatttctt-aatagttt 164  Q
    |||||||||||||||||||||||||||||| || |||||||| | |||||| ||||||||    
T  21879220 tctatcatatatcatatctctatccaactcattcatctctagatctttcttgaatagttt 21879279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 33710054 - 33709947
Alignment:
Q  179 ctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcaccttacctaagttt 278  Q
    |||||||||| ||| |||| ||||||| ||| || ||||||| || ||| |||||| |||| ||||||||||| ||||| ||| ||||| | |  |||||    
T  33710054 ctgtctctagtgatctgactaccctccttctgatccactctctttactacagaatccacagttcttctctccacatgcctaaaccacctaaacctagttt 33709955  T
Q  279 ccaccatc 286  Q
    ||||||||    
T  33709954 ccaccatc 33709947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 44719372 - 44719463
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaat 141  Q
    |||| |||||||||||||||||  | | |||||||||||||||||| |||||||  ||||| ||||| | ||| |||||| ||||| |||||    
T  44719372 caagtcttatcccactaagtagggtcggctacatggatcaaacgacaccataatgctctattatataccgtatttctatctaactcattaat 44719463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 55388222 - 55388333
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  | ||| ||||||||||||  || ||| ||| |||||||||| ||||||| || ||| ||||| |||||||| |  |    
T  55388222 caagccttatcccactaagtggggtcgacaacatggatcaaattacaccacaatgttctatcataaatcatatttcgatctaactcattaatctccaaat 55388321  T
Q  150 atttcttaatag 161  Q
     |||||||||||    
T  55388322 ctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 30853586 - 30853500
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||||||  |||||| ||| ||| ||| ||||| |||||| |||||| ||||||| ||| | |||| |||||||||    
T  30853586 ctacatggatcaaacgacatcataatgttcaatcgtatttcatacctctatgcaactcattaatctttagatttttcataatagttt 30853500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 51841241 - 51841323
Alignment:
Q  82 atggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||  ||||||||| || |||||||||||||||| ||||||||||| | ||| ||||  |  |||||||||||||    
T  51841241 atggatcaaacaccgccataatgttgtatcatatatcatatccctatccaactcttgaatttctaaatccttcttaatagttt 51841323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 55008017 - 55007907
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  | | ||||||||||||||  ||| ||||||  ||||||||| | ||||| ||  |||||||| ||||||||||  |    
T  55008017 caagccttatcccactaagtggggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcattaatctctaaat 55007918  T
Q  150 atttcttaata 160  Q
     ||||||||||    
T  55007917 ctttcttaata 55007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 6957869 - 6957800
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatca 119  Q
    |||||||||||||||||||| | || | |||||||||||||| |||| |||| | |||||||||| ||||    
T  6957869 caagccttatcccactaagtgggatcggctacatggatcaaatgacgtcatagtgttctatcatacatca 6957800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 8598957 - 8599066
Alignment:
Q  55 cttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttc 154  Q
    ||||||||||||||| |  | | ||||||| |||||||||||||||||| |||||||| ||| | ||| ||| || ||||| ||||  | ||| | ||||    
T  8598957 cttatcccactaagtggcgtcggctacatgaatcaaacgacgccataatgttctatcaaataccttatttctttctaactcattaacatttagatctttc 8599056  T
Q  155 ttaatagttt 164  Q
    ||||||||||    
T  8599057 ttaatagttt 8599066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 45569085 - 45569134
Alignment:
Q  115 tatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||||||    
T  45569085 tatcatatctctatccaactcattgatctctagatttttcttaatagttt 45569134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 48154894 - 48154955
Alignment:
Q  86 atcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||| | |||||||| |||| ||||||||||| | |||||||||||| |||||||||||    
T  48154894 atcaaacaatgccataatgttctgtcatatatcatgtttctatccaactcattaatctctag 48154955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 55029056 - 55028995
Alignment:
Q  86 atcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||||| ||||||||||| |||||||||||| ||||| |||||| | ||| |||||||||||    
T  55029056 atcaaatgacgccataatgttctatcatataacatatttctatctagctcattaatctctag 55028995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 3979191 - 3979127
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    ||||||||||||||||| || || ||| ||||||||||||||  ||| |||||| ||||||||||    
T  3979191 caagccttatcccactatgtggagtaggctacatggatcaaattacgtcataatgttctatcata 3979127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 31959825 - 31959889
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  31959825 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 31959889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 52569526 - 52569590
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  52569526 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 52569590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 4441123 - 4441060
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    ||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  4441123 aagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 4441060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 31961422 - 31961505
Alignment:
Q  183 ctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcacc 266  Q
    |||||| ||||||||  | ||||||||||| |||||||||  ||| |||||| ||| |||||||||| | ||||||||| ||||    
T  31961422 ctctagtgatttgactcctctccatctaatccactctcctaactacagaatccacaagtcttctctctacatgcccaaaccacc 31961505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 7970420 - 7970482
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaa 140  Q
    |||||||||||||||||| ||||||| || |||||||||  |||| |||||| ||||| ||||    
T  7970420 ctacatggatcaaacgacaccataatgttttatcatatactatatttctatctaactcattaa 7970482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 20999243 - 20999157
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||| ||||||||||||| ||||||  |||| |||||  ||||| | ||| |||||| |||| |||||| | ||||||||||||||    
T  20999243 ctacaaggatcaaacgacgtcataatgctctaccatatgccatatatttattcaactcattaaactctagatctttcttaatagttt 20999157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 27450191 - 27450253
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||    
T  27450191 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 27450253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 29182666 - 29182604
Alignment:
Q  107 ctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttcta 169  Q
    ||||||||||| | || || ||||||||| ||||||||||| || ||||||||||||| ||||    
T  29182666 ctatcatatatgacatatccatccaactcattaatctctagatacttcttaatagtttctcta 29182604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 34585753 - 34585691
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||||| |  ||  |||||||||||||| ||||||||||| || |||||    
T  34585753 caagccttatcccactaagtgggttaagctacatggatcaaatgacgccataatgttttatca 34585691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 38017360 - 38017318
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaac 92  Q
    |||||||||||||||||||||| || | |||||||||||||||    
T  38017360 caagccttatcccactaagtaggatcggctacatggatcaaac 38017318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 39761367 - 39761457
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttct 168  Q
    |||||| ||||||| ||| |||| || |||||| ||| |||| ||||||||| |||| |||||||||||| |  | || ||||||||||||    
T  39761367 ctacatagatcaaaggacaccatgatgttctattatacatcacatctctatctaacttgttaatctctagattgtgctaaatagtttttct 39761457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 42293332 - 42293390
Alignment:
Q  106 tctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||| ||||| |||||| ||||| ||||| ||||| | ||||||||||||||    
T  42293332 tctatcatataccatatgtctatctaactcattaatttctagatctttcttaatagttt 42293390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 2589315 - 2589246
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||| |||||||||||||||| | |||||||| | | ||||| |  ||||||||| |||||||||||    
T  2589315 ctacatgaatcaaacgacgccatagtgttctatcaaaaaccatattttcatccaactcattaatctctag 2589246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 13262482 - 13262421
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||| |||||||| || | | ||||||| ||||||||||| |||| ||||||||||    
T  13262482 aagccttatcacactaagtggagtcggctacatgaatcaaacgacgtcatagttttctatca 13262421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 43434195 - 43434134
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatc 111  Q
    |||||||||||||||||||| |  | |||||||||||||||| |||||| || | |||||||    
T  43434195 caagccttatcccactaagtgggctcgactacatggatcaaatgacgccgtagtgttctatc 43434134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 436500 - 436436
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| || |||||| | ||||||||||    
T  436500 caagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcata 436436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 1777028 - 1777092
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||| ||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  1777028 caagccttatcccattaagtggggtcggctacatggatcaaatgacgccatactgttctatcata 1777092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 19061946 - 19062010
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    ||||||||||||||||| || |  | | |||||||||||||| ||||||||| | ||||||||||    
T  19061946 caagccttatcccactaggtggggtcggctacatggatcaaatgacgccatagtgttctatcata 19062010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 20047648 - 20047592
Alignment:
Q  108 tatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||| | ||||||||||||||||| ||||||||||| | ||  ||||||||||    
T  20047648 tatcatatttgatatctctatccaactcattaatctctagatcttctttaatagttt 20047592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 26024988 - 26025044
Alignment:
Q  108 tatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||| | ||| |||| ||||||||| ||||||||||| | ||||||||||||||    
T  26024988 tatcataaaccatgtctcgatccaactcattaatctctagatctttcttaatagttt 26025044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 34208280 - 34208376
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    |||||||||||||| ||||  |  | || |||||||||||||   ||||||||| |||||||||| | ||||| |  ||||||||| ||||||||||    
T  34208280 caagccttatcccaataaggggggtcgagtacatggatcaaattgcgccataatgttctatcataaaccatatttggatccaactcattaatctcta 34208376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 35690542 - 35690478
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||| ||||||||||||||| |  | | ||||||||||||||  |||||||||| ||||||||||    
T  35690542 caagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcata 35690478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 47372975 - 47372915
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctat 110  Q
    ||||||||||||||||||||||  | | |||||||||||| |||| | |||||| ||||||    
T  47372975 caagccttatcccactaagtagggtcggctacatggatcagacgatgtcataatgttctat 47372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 48622554 - 48622618
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||| ||| ||||||||| | ||||||||||    
T  48622554 caagccttatcccactaagtggggtcggctacatggattaaatgacgccatagtgttctatcata 48622618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 49939747 - 49939807
Alignment:
Q  52 agccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||    
T  49939747 agccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 49939807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 56200185 - 56200153
Alignment:
Q  82 atggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||||| ||||||||||    
T  56200185 atggatcaaacgacgccataatgttctatcata 56200153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 8197552 - 8197666
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||| ||||||||||||||||  | | |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||| |    
T  8197552 caagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcattaatctttagat 8197651  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  8197652 ctttcttaatagttt 8197666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 8202312 - 8202426
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||| ||||||||||||||||  | | |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||| |    
T  8202312 caagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcattaatctttagat 8202411  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  8202412 ctttcttaatagttt 8202426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 3305820 - 3305934
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||||||| |||| | ||  |||| |||||||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||||||| |    
T  3305820 caagccttatcccacaaagtgggatccactatatggatcaaacgacgccataatgttctaccgtatatcatttctatatccaactcgttaatctctagat 3305919  T
Q  150 atttcttaatagttt 164  Q
    ||||||| |||||||    
T  3305920 atttctttatagttt 3305934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 19234996 - 19235109
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggta 150  Q
    ||||||||||||||||||| || | | |||||||||| |||||||| || ||| |||||||| ||| ||||| ||||||||| || ||||||||||| |     
T  19234996 aagccttatcccactaagtggagttggctacatggattaaacgacgacagaatgttctatcaaataccatatttctatccaaatcattaatctctagatc 19235095  T
Q  151 tttcttaatagttt 164  Q
    ||||| ||||||||    
T  19235096 tttctcaatagttt 19235109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 37470146 - 37470258
Alignment:
Q  52 agccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtat 151  Q
    |||||||||||||||||| | ||   ||||||||||||||| || ||||||| |||||||||||  ||||| || ||||||||| ||||||||||| | |    
T  37470146 agccttatcccactaagtgggattagctacatggatcaaactacaccataatgttctatcatatgccatatttcgatccaactcattaatctctagatct 37470245  T
Q  152 ttcttaatagttt 164  Q
     || |||||||||    
T  37470246 gtcctaatagttt 37470258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 33504495 - 33504380
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgtt-aatctctagg 148  Q
    |||||||||||||||||||| |  | | ||| ||||||||||  |||||||||| |||||||||||| ||||| || ||||||||  || |||||||||     
T  33504495 caagccttatcccactaagtggggtcggctagatggatcaaattacgccataatgttctatcatataccatatttcaatccaacttattaaatctctaga 33504396  T
Q  149 tatttcttaatagttt 164  Q
    | ||||||||||||||    
T  33504395 tctttcttaatagttt 33504380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 2906036 - 2906118
Alignment:
Q  82 atggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||| ||||||| |||||||||||| ||| ||| |||||||||| || |||||||  | ||||||||||||||    
T  2906036 atggatcaaacgacaccataatattctatcatataacatttctttatccaactcattgatctctacatttttcttaatagttt 2906118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 19336904 - 19337018
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||| |||||||| ||||| | || | ||||||||||||||  |||||||||| |||||||||| | ||||| || ||||||||| ||||||||||  |    
T  19336904 caagctttatcccaataagtgggattggctacatggatcaaattacgccataatgttctatcataaaccatatttcgatccaactcattaatctctaaat 19337003  T
Q  150 atttcttaatagttt 164  Q
     |||||| |||||||    
T  19337004 ctttctttatagttt 19337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 38435223 - 38435109
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||| ||||||||| | || | ||||||||||||||  |||||||||| ||| |||||| | || || || ||||||| | ||||||||||| |    
T  38435223 caagccttatgccactaagtgggatcggctacatggatcaaattacgccataatgttcaatcataaaccaaatttcgatccaacacattaatctctagat 38435124  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  38435123 ctttcttaatagttt 38435109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 32402771 - 32402674
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||| |||||||||||||| || || | |||| ||||||||| ||  ||||||| |||||||||||| | ||| |||||||||||| |||||||||||    
T  32402771 caagtcttatcccactaagcaggatcgtctacgtggatcaaatgaaaccataatgttctatcatataccttatttctatccaactcattaatctctag 32402674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 171
Target Start/End: Original strand, 37481654 - 37481749
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaat 171  Q
    ||||| ||| |||||| ||| |||||||||||||||| ||| ||||| | |||||||||| || ||| |||| | |||||||||||||| ||||||    
T  37481654 gactagatgaatcaaaagacaccataattttctatcaaataccatatttttatccaactcatttatcgctagatctttcttaatagtttctctaat 37481749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 9556380 - 9556494
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||| |||||||||||| || | | ||||||| ||||||  || || |||| |||||||||| | |||||||  ||||||||| |||||| |||| |    
T  9556380 caagcctcatcccactaagtggagtcggctacatgtatcaaattacaccctaatgttctatcataaaccatatcttgatccaactcattaatcactagat 9556479  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  9556480 ctttcttaatagttt 9556494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 13240774 - 13240912
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||  |  | | | ||| ||||||||| ||| ||||||  | ||||||| | || || || || |||||||||||||||||| |    
T  13240774 caagccttatcccactaagctgggtcggcgacacggatcaaacaacggcataatggtttatcataaaccaaatttcgattcaactcgttaatctctagat 13240873  T
Q  150 atttcttaatagtttttctaattcttcatctgtctctag 188  Q
     |||||||||||||||||||  ||||| |||| ||||||    
T  13240874 ctttcttaatagtttttctaggtcttcctctgcctctag 13240912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 19024449 - 19024335
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||| ||| |  | | ||| || ||||||||||||||||||  |||||||| ||||  ||| | |||||||||| ||||||| ||| |    
T  19024449 caagccttatcccactgagtggggtcggctatatagatcaaacgacgccataaagttctatcaaatattgtatttatatccaactcattaatctttagat 19024350  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  19024349 ctttcttaatagttt 19024335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 42092760 - 42092674
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||| |||||| |||  ||||||||||||| |||| ||||||||||  ||||||||||  | ||| ||||||||||    
T  42092760 ctacatggatcaaacaacgccacaatcctctatcatatatcgtatcactatccaactaattaatctctacatcttttttaatagttt 42092674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 43832341 - 43832255
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||| | || |||||| |||||| ||| ||||||||  |||||||||| ||||||||||| |  |||||||||||||    
T  43832341 ctacatggatcaaatgccgtcataatgttctataatacatcatatccttatccaactcattaatctctagatccttcttaatagttt 43832255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 29159359 - 29159286
Alignment:
Q  55 cttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctat 128  Q
    |||||||| |||| |||||| |  ||||||||||||||||||||||||| || ||||| ||||||||| |||||    
T  29159359 cttatcccgctaaatagaatcggatacatggatcaaacgacgccataatattttatcaaatatcatatttctat 29159286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 1626460 - 1626352
Alignment:
Q  56 ttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttct 155  Q
    |||| ||||||||||| || | | ||||||||||||| |||    ||| |||||| ||||||||||| | ||| |||||| ||||||||||| | |||||    
T  1626460 ttataccactaagtaggatcggccacatggatcaaacaacgttgcaatgttctattatatatcatatttttatacaactcattaatctctagatctttct 1626361  T
Q  156 taatagttt 164  Q
    |||||||||    
T  1626360 taatagttt 1626352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 31254513 - 31254445
Alignment:
Q  96 gccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||| |||| ||||| ||||||| ||||| |||||| ||||||||||| | ||||||||||||||    
T  31254513 gccataatgttctgtcataaatcatatttctattcaactcattaatctctagatctttcttaatagttt 31254445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 15836206 - 15836115
Alignment:
Q  55 cttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||| |  | | ||||||||| ||||| ||  |||||  | | |||| |||||||||||||||||||||||||||||||||    
T  15836206 cttatcccactaagtggggtcggctacatggaccaaacaacaacataacgtccaatcagatatcatatctctatccaactcgttaatctcta 15836115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 43260529 - 43260446
Alignment:
Q  184 tctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcacct 267  Q
    ||||| |||||||| ||||||||||| ||  ||||||||| |||||||||| ||| ||||| ||| || ||||||||| |||||    
T  43260529 tctagtgatttgactaccctccatctgatctactctccttactatagaatctacaagtcttttcttcacatgcccaaaccacct 43260446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 1303468 - 1303530
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaat 141  Q
    ||||||||||||| | ||||||||| |||||| ||||| |||||| ||||||||||| |||||    
T  1303468 tacatggatcaaatgccgccataatattctataatatagcatatccctatccaactcattaat 1303530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 9496137 - 9496023
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||| ||||||||||| |  | | ||||||||||||||  |||||||||| |||||||||| | ||||| |  ||||||||| |||| |||||  |    
T  9496137 caagccttgtcccactaagtggggttggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaacctctaaat 9496038  T
Q  150 atttcttaatagttt 164  Q
     ||||| ||||||||    
T  9496037 ctttctgaatagttt 9496023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 26671039 - 26670925
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||| |||||||||||||| ||  | | ||||||||||||||  || |||| || |||||||||| ||||||| |   |||||||| ||||||||||  |    
T  26671039 caagtcttatcccactaagcagtgtcggctacatggatcaaattacaccattatattctatcataaatcatattttggtccaactcattaatctctaaat 26670940  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  26670939 ctttcttaatagttt 26670925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 28960222 - 28960336
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||| | || | ||||||||| |||||||||| ||||| |  ||||||| | | ||||||| | |||||||| || |||||||| |    
T  28960222 caagccttatcccactaaatggagtcgactacatgaatcaaacgacaccatagtgctctatcaaaaaccatatctttctccaactcatttatctctagat 28960321  T
Q  150 atttcttaatagttt 164  Q
      ||||||| |||||    
T  28960322 ccttcttaacagttt 28960336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 33287692 - 33287578
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||| ||| ||||||||||| || | | ||||| ||||||||| | | |||||| |||||||||| | ||||| || ||| ||||| ||||| ||||| |    
T  33287692 caagtcttgtcccactaagtggagttggctacaaggatcaaactatgtcataatgttctatcataaaccatatttcgatctaactcattaatttctagat 33287593  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  33287592 ctttcttaatagttt 33287578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 33625257 - 33625323
Alignment:
Q  98 cataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||| |||||||||| | |||||  || |||||||| ||||||||||| ||||||||||||||||    
T  33625257 cataatgttctatcataaaccatattactttccaactcattaatctctagatatttcttaatagttt 33625323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 42149715 - 42149785
Alignment:
Q  94 acgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||| |||||||||| | ||||| |||||||| |||  |||||||||| | ||||||||||||||    
T  42149715 acgccataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagttt 42149785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 41779178 - 41779231
Alignment:
Q  107 ctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaata 160  Q
    |||||||||||||||||||||| |||||| ||||||||||| | ||| ||||||    
T  41779178 ctatcatatatcatatctctattcaactcattaatctctagatcttttttaata 41779231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 227460 - 227396
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  227460 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 7326171 - 7326235
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  7326171 caagccttatcccactaagtggggttggctacatggatcaaatgacgccatagtgttctatcata 7326235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 12474938 - 12475002
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  12474938 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 12475002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 28508949 - 28508885
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  28508949 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 28508885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 30306303 - 30306239
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  30306303 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 30306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 3481397 - 3481334
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaat 141  Q
    ||||||||||||||  |||||||||| |||||||||| | ||||| ||| ||||||| ||||||    
T  3481397 ctacatggatcaaattacgccataatgttctatcatagaccatatttctgtccaacttgttaat 3481334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 111
Target Start/End: Original strand, 6841484 - 6841523
Alignment:
Q  72 aatagactacatggatcaaacgacgccataattttctatc 111  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  6841484 aatagactacacggatcaaacgacgccataatgttctatc 6841523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 23915735 - 23915818
Alignment:
Q  81 catggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||  |||||||| | |||||||||| | ||||  ||| |||| ||| ||||||||||| | ||||||||||||||    
T  23915735 catggatcaaattacgccatagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagttt 23915818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 3635334 - 3635396
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||    
T  3635334 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 3635396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 171
Target Start/End: Original strand, 6230278 - 6230396
Alignment:
Q  53 gccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatt 152  Q
    ||||||||||||||| | || ||| |||||| |||||||| | |  ||||| || ||||||||| |||||   |||| || ||  |||||||||| | ||    
T  6230278 gccttatcccactaaatggagtaggctacatagatcaaacaatgttataatattttatcatataccatattcatatcaaattcaataatctctagatttt 6230377  T
Q  153 tcttaatagtttttctaat 171  Q
    |||||||||||| ||||||    
T  6230378 tcttaatagtttctctaat 6230396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 12141787 - 12141701
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||| |||||||  | |||||||| |||||||||||| ||||| |  |||||| || |||||||||| || |||| |||||||||    
T  12141787 ctacatcgatcaaatcatgccataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagttt 12141701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 12882056 - 12882170
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||||||||||||    ||| ||||||||||||||  |||||| ||| |||||||| | | ||||| |  ||||||||| |||| |||||  |    
T  12882056 caagccttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactcattaacctctaaat 12882155  T
Q  150 atttcttaatagttt 164  Q
    ||||| || ||||||    
T  12882156 atttcctagtagttt 12882170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 15025765 - 15025703
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||||| | || | ||||||| ||||||||| |||||| | ||||||||    
T  15025765 caagccttatcccactaagttgcatcggctacatgaatcaaacgatgccatagtgttctatca 15025703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 26784379 - 26784465
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||  |  ||| ||| || ||||||||| ||||| ||||| |||||| ||||||||||  | ||||||||||||||    
T  26784379 ctacatggatcaaattaaaccaaaatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatagttt 26784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 41197238 - 41197300
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    ||||||||||||||  |||| |  | |||||||||||||||| ||||||||||| ||||||||    
T  41197238 caagccttatcccatcaagtggggtcgactacatggatcaaatgacgccataatgttctatca 41197300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 43573141 - 43573231
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaa 140  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||||  ||| |||||| ||||||| |  ||||||||| ||||    
T  43573141 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataacgttcgatcataaatcatatttggatccaactcattaa 43573231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 4807866 - 4807805
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatc 111  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | |||||||    
T  4807866 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatc 4807805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 8491364 - 8491276
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcat--atatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||| ||||||| ||| |||||| |||||||||  ||||||||| || |||||| | ||||| |||||  | ||||||||||||||    
T  8491364 ctacatgtatcaaacaacgtcataatgttctatcatatatatcatatttcaatccaaattgttaacctctaaatctttcttaatagttt 8491276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 12026081 - 12026130
Alignment:
Q  115 tatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||| |||||| ||||| ||||||||||| | ||||||||||||||    
T  12026081 tatcatatttctatcaaactcattaatctctagatctttcttaatagttt 12026130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 12734971 - 12734886
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||||||||||||||||||| |  | ||||||||||||||||  || ||||| | |||||||||| | ||||| |  |||||||||    
T  12734971 caagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaactc 12734886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 25834949 - 25834864
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||| | | |||||||||| | ||||| |  |||||||||    
T  25834949 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactc 25834864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 286
Target Start/End: Complemental strand, 42092633 - 42092540
Alignment:
Q  193 ttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcaccttacctaagtttccaccatc 286  Q
    ||||| ||||||||||||||  ||||||||| ||| | |||| ||| | |||||||| | ||||||| ||||||| | || |||||| ||||||    
T  42092633 ttgactaccctccatctaatctactctccttactacaaaatctacaagccttctctctacatgcccagatcacctaatcttagtttctaccatc 42092540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 451659 - 451723
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||| ||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  451659 caagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 451723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 2377280 - 2377164
Alignment:
Q  94 acgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaat-tcttcatctgtctctagagat 192  Q
    |||| ||||| |||||||||||| ||||  |  ||||||||| ||| ||||||  | ||| |||||||||| ||| |  ||||||||||||||||| |||    
T  2377280 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttcatctgtctctagtgat 2377181  T
Q  193 ttgaccaccctccatct 209  Q
     |||| | |||||||||    
T  2377180 ctgactatcctccatct 2377164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 3243664 - 3243728
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||| ||||||||| ||||||||| | ||||||||||    
T  3243664 caagccttatcccactaagtggggtcggctacctggatcaaatgacgccatagtgttctatcata 3243728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 9531611 - 9531675
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||||| ||| ||||||    
T  9531611 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttccatcata 9531675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 10516760 - 10516831
Alignment:
Q  50 caagccttatcccactaagt-agaatagactacatggatcaaacgacgccataattttctatcatatatcata 121  Q
    |||||||||||||||||||| |||  || ||||||||||||||  |||||||||| || ||||||| ||||||    
T  10516760 caagccttatcccactaagtgagatcag-ctacatggatcaaattacgccataatattttatcataaatcata 10516831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 19015982 - 19015914
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||||| | |||| | ||| ||||||||| ||| ||||| || |||| ||||||||||    
T  19015982 ctacatggatcaaacgatgtcatattgttcaatcatatatgatacctctacccgactcattaatctcta 19015914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 286
Target Start/End: Complemental strand, 5338956 - 5338747
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttct-taatagtttttctaattcttc 176  Q
    ||||||||||||||  |||||||||| |||||| ||| |||| || || ||||||||| ||||||||||| | ||||| | ||||||||||||  ||| |    
T  5338956 ctacatggatcaaattacgccataatgttctataataaatcacatttcgatccaactcattaatctctagatctttctcttatagtttttctaggtctac 5338857  T
Q  177 atctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcaccttacctaagt 276  Q
     |||| |||||| ||| |||  | ||||||||| ||  ||||||||| ||| || ||| ||||||||||||||   ||||||||| ||||| | || |||    
T  5338856 ttctgcctctagtgatctgaatatcctccatctgatctactctccttactaaagcatctacaggtcttctctctgcatgcccaaaccacctaagctcagt 5338757  T
Q  277 ttccaccatc 286  Q
    ||||||||||    
T  5338756 ttccaccatc 5338747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 283
Target Start/End: Original strand, 13827620 - 13827826
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag--gtatttcttaatagtttttctaattcttc 176  Q
    ||||| ||| |||| ||| |||||| |||||||||||| ||||| |||||||||||| |||||||||||   | |||||||||||||||||||  |||||    
T  13827620 tacatagatgaaacaacgtcataatgttctatcatataccatatttctatccaactcattaatctctagacttttttcttaatagtttttctaggtcttc 13827719  T
Q  177 atctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcaccttacctaagt 276  Q
     |||| |||||| ||| |||| |   ||||| | ||  ||||||||| ||| |||||| |||  ||||||||| | ||| ||||| |||||||||  |||    
T  13827720 ctctgcctctagtgatctgactatgttccatatgatctactctccttactacagaatctacacttcttctctctacatgtccaaaccaccttaccctagt 13827819  T
Q  277 ttccacc 283  Q
    |||||||    
T  13827820 ttccacc 13827826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 286
Target Start/End: Complemental strand, 38869125 - 38868905
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttctta------------atagtttt 165  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| |||||||||| | |||||| |||| | |||||||            ||||||||    
T  38869125 ctacatggatcaaacgacgccataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaataatttctcttatagtttt 38869026  T
Q  166 tctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcac 265  Q
    ||||  ||||| |||| |||||  |||||||| ||||||||||||||  ||||||||  ||| |||||| ||  || ||||||| | ||||||||| |||    
T  38869025 tctaggtcttcttctgcctctaatgatttgactaccctccatctaatctactctcctcgctagagaatctactagtgttctctctacatgcccaaaccac 38868926  T
Q  266 cttacctaagtttccaccatc 286  Q
    || | |  |||||||||||||    
T  38868925 ctaagccgagtttccaccatc 38868905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 6025870 - 6025779
Alignment:
Q  56 ttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||||||||||||| |||| | |||||||||||||| |||||||| || |||||||| ||| ||||| |||||||||||| |||||||||||    
T  6025870 ttatcccactaagtggaatcggctacatggatcaaatgacgccatcatgttctatcagataccatatttctatccaactcattaatctctag 6025779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 50 - 165
Target Start/End: Complemental strand, 50636352 - 50636237
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||||| ||||||||||| |||||||| ||||||| || | ||||||  ||||||||||| ||||| | ||||||||||  |||||||||| |    
T  50636352 caagccttatcccgctaagtagaatcgactacattgatcaaatgatgtcataatgctctatcatataccatatttttatccaactcaataatctctagat 50636253  T
Q  150 atttcttaatagtttt 165  Q
     | |||||||||||||    
T  50636252 ttatcttaatagtttt 50636237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 38877354 - 38877447
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatct 143  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||||| ||||||| ||||  ||||| |||||||||||||||||||    
T  38877354 caagccttatcccactaagtgggttcggctacatggatcaaatgacgccataatgttctatcgtatactatatccctatccaactcgttaatct 38877447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 145
Target Start/End: Original strand, 30396740 - 30396835
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctct 145  Q
    |||||||||||||||||||| |  | | ||||| |||||||||| | ||||||| |||||||||||||| |||| ||||||||||| |||||||||    
T  30396740 caagccttatcccactaagtggggttggctacacggatcaaacgccaccataatgttctatcatatatcgtatccctatccaactcattaatctct 30396835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 249
Target Start/End: Original strand, 33560869 - 33561080
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||||||||||||||  | | ||||||||||||||| | | |||||| |||| | ||||| ||||| | ||||||||||| |||||||||| |    
T  33560869 caagccttatcccactaagtagggttggctacatggatcaaacaatgtcataatgttctctgatataccatatttatatccaactcgctaatctctagat 33560968  T
Q  150 atttcttaatagttt------------ttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaac 237  Q
     || |||||||||||            |||||   |||| |||| |||||| |||||||| ||||||||||  ||  ||||||||| ||| |||||| ||    
T  33560969 cttacttaatagtttcccttacagtttttctaggacttcctctgcctctagtgatttgactaccctccatcatatctactctccttactacagaatctac 33561068  T
Q  238 aggtcttctctc 249  Q
    ||||||||||||    
T  33561069 aggtcttctctc 33561080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 15577660 - 15577575
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||| || | ||||| |||||||| |||||||||||||||||||||| ||||||||||  |  |||||||||||||    
T  15577660 tacatggatcaaacaacacaataatgttctatcaaatatcatatctctatccaactcattaatctctatatccttcttaatagttt 15577575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 52073059 - 52073156
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||||||||||| |||| |  | | ||||||||||||| || ||||||||| ||||||||||||||||| | ||||||| ||| |||||||||||    
T  52073059 caagccttatcccaccaagtggggtcggctacatggatcaatcgccgccataatgttctatcatatatcatagccctatccagctcattaatctctag 52073156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 42501373 - 42501269
Alignment:
Q  56 ttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttct 155  Q
    ||||||||||||||||  | | |||||||||| |||||||||  |||| |||||||||||  ||||| |||||||||||| ||||||| ||| | |||||    
T  42501373 ttatcccactaagtagggtcggctacatggattaaacgacgctgtaatgttctatcatattccatatttctatccaactcattaatctatagatctttct 42501274  T
Q  156 taata 160  Q
    |||||    
T  42501273 taata 42501269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 109032 - 109143
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttct-taatagtttttctaattcttc 176  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||| | |||||||||| ||||| ||||  | ||||| | ||||||||||||  ||| |    
T  109032 ctacatggatcaaatgacgccataatgttctatcatacatcatatatttatccaactcattaatgtctatatctttctcttatagtttttctaggtctac 109131  T
Q  177 atctgtctctag 188  Q
    || |||||||||    
T  109132 atatgtctctag 109143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 4590547 - 4590662
Alignment:
Q  54 ccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtattt 153  Q
    |||||||||||||||| |  | | ||||||||||||||  || ||||| | |||||||| ||||||||| |||||||||||| | ||||| ||  | |||    
T  4590547 ccttatcccactaagtggggtcggctacatggatcaaattacaccatattgttctatcacatatcatatatctatccaactcatcaatctataaatcttt 4590646  T
Q  154 cttaatagtttttcta 169  Q
    ||||||||||||||||    
T  4590647 cttaatagtttttcta 4590662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 286
Target Start/End: Original strand, 10569082 - 10569326
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||  ||||| |||  | |||||||||||||| ||    ||||| ||||||||||||  |||| |||||||| ||  ||||||||||| |    
T  10569082 caagccttatccctttaagtggaaccggctacatggatcaaatgatattataatgttctatcatatacgatatttctatccagcttattaatctctagat 10569181  T
Q  150 atttcttaatagtttttctaattctt--------catctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggt 241  Q
     |||||||||||||| | | ||| ||        | |||| |||||| |||||||  ||||||||||||||  || |||| | ||| |||||| ||||||    
T  10569182 ctttcttaatagtttcttttattttttttgtgttcctctgcctctagtgatttgattaccctccatctaatctaccctccgtactacagaatctacaggt 10569281  T
Q  242 cttctctccagatgcccaaatcaccttacctaagtttccaccatc 286  Q
    |||||||| | ||||||||| ||||| | | |||||| |||||||    
T  10569282 cttctctctacatgcccaaaccacctaagccaagttttcaccatc 10569326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 40920566 - 40920637
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||||| |||||| ||| ||||||| |||||||||||| ||||| |||||||||||| |||||||||||    
T  40920566 gactacatgaatcaaaagacaccataatattctatcatataccatatttctatccaactcattaatctctag 40920637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 3818867 - 3818981
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||||||||||||  | | | |||||||||||||| | || |||||| ||| |||||| | ||||| ||||| |||||| ||||||||||  |    
T  3818867 caagccttatcccactaagtgcagtcggctacatggatcaaatggcgacataatgttccatcataaaccatatttctattcaactcattaatctctaaat 3818966  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  3818967 ctttcttaatagttt 3818981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 8796480 - 8796366
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  | | |||||||||| |||  |||||||||| |||||||||| | ||||| || |||||| || ||||| ||||| |    
T  8796480 caagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcattaatatctagat 8796381  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  8796380 ctttcttaatagttt 8796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 49377572 - 49377490
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaa 132  Q
    |||||||||||||||||| | || | | |||||||||||||||  ||||||||| |||||||||||||||| || ||||||||    
T  49377572 caagccttatcccactaactggagtcggctacatggatcaaacaccgccataatgttctatcatatatcatttccctatccaa 49377490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 16822038 - 16822145
Alignment:
Q  56 ttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttct 155  Q
    |||||||||||||| |  | ||||||||||| |||| | ||||||||| ||| ||||||||||||||| ||||||| ||| ||||||||||  | |||||    
T  16822038 ttatcccactaagtggggtcgactacatggaccaaa-gccgccataatgttcaatcatatatcatatcgctatccagctcattaatctctacatctttct 16822136  T
Q  156 taatagttt 164  Q
    || ||||||    
T  16822137 tactagttt 16822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 10584968 - 10585027
Alignment:
Q  110 tcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttcta 169  Q
    ||||||||||||||||| |||||||| ||||||||| | | |||||||||||||||||||    
T  10584968 tcatatatcatatctctgtccaactcattaatctctggatctttcttaatagtttttcta 10585027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 17233810 - 17233925
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaattcttca 177  Q
    ||||||||||||||||  | ||||||  ||||||||||| |||||  |||||||||||  ||||| || | | |||||||||||||||||||  |||||     
T  17233810 ctacatggatcaaacgctgacataatgctctatcatataccatattcctatccaactcaataatcgctggatctttcttaatagtttttctaggtcttcc 17233909  T
Q  178 tctgtctctagagatt 193  Q
    |||| |||||| ||||    
T  17233910 tctgcctctagtgatt 17233925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 37591234 - 37591148
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag-gtatttcttaatagtttttc 167  Q
    |||||||||||||||||  |||||| ||||||| |||||   ||||||||||||||| |||||||||||  | |||||||||||||||||    
T  37591234 tacatggatcaaacgacatcataatgttctatcttatat---atctctatccaactcattaatctctagattttttcttaatagtttttc 37591148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 853825 - 853910
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||| ||||  ||||||||  |||||||||||||||| || |||||||||||  |||||||||| |  |||||||||||||    
T  853825 tacatggatgaaactccgccataacgttctatcatatatcatgtccctatccaactcactaatctctagatccttcttaatagttt 853910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 16943400 - 16943355
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcata 121  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  16943400 gactacatggatcaaacgccgccataatgttctatcatatatcata 16943355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 52160301 - 52160419
Alignment:
Q  97 ccataattttctatcatatatcatatctctatccaactcgttaatctctaggt----atttct-taatagtttttctaattcttcatctgtctctagaga 191  Q
    ||||||| |||||||||||||||||| |||||| ||||||||||| ||||| |     ||||| | |||||||||||   ||||||| || |||||| ||    
T  52160301 ccataatattctatcatatatcatatttctatcaaactcgttaatttctagatcttagtttctcttatagtttttctctgtcttcatatgcctctagtga 52160400  T
Q  192 tttgaccaccctccatcta 210  Q
    |||||| ||||||||||||    
T  52160401 tttgactaccctccatcta 52160419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 39526008 - 39525964
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatat 122  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  39526008 ctacatggatcaaacgacgccataatattctatcatctatcatat 39525964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 41560500 - 41560404
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||||| ||||||||||   ||||| |  ||||||||| ||||||||||    
T  41560500 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcattaatctcta 41560404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 52482431 - 52482490
Alignment:
Q  88 caaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||||| ||||||||| ||| ||||||||||||||| || |||||||| |||||||||||    
T  52482431 caaacgccgccataatgttccatcatatatcatatccctgtccaactcattaatctctag 52482490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 7124384 - 7124298
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||||| |||||||  |||||| |||| ||||| ||||||||| || ||||||  ||| | ||||| ||||||||    
T  7124384 ctacatggatcaaacgacaccataatgctctatcctataccatatttctatccaattcattaatcaatagatctttctcaatagttt 7124298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 8203173 - 8203259
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||| || | |||||||||| ||||||| | ||||||| |||  |||||||| ||||||||||| | ||| ||||||||||    
T  8203173 ctacatggataaatcaacgccataatgttctatcttctatcatacctccgtccaactcattaatctctagatcttttttaatagttt 8203259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 17640083 - 17640197
Alignment:
Q  55 cttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttc 154  Q
    ||||||||||||||| | || ||| ||||| |||||||||||||||||| |||||| | |    |||| | |||||||||| ||||||||||| |  |||    
T  17640083 cttatcccactaagttggattgacaacatgaatcaaacgacgccataatgttctattacaagcaatatttttatccaactcattaatctctagatccttc 17640182  T
Q  155 ttaatagtttttcta 169  Q
     | ||||||||||||    
T  17640183 cttatagtttttcta 17640197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 17815722 - 17815636
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||||| ||| |||  ||||||||||| ||||| |||||| ||||| | |||| |||| | ||||| ||||||||    
T  17815722 ctacatggatcaaacgacaccaaaatgctctatcatataccatatttctatctaactcatcaatcactagatctttctaaatagttt 17815636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 30017092 - 30017182
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttcta 169  Q
    ||||||||||||||||| ||||||| |||| ||  ||||  |||||||||| ||||| ||||| ||||||| |||  |||| |||||||||    
T  30017092 tacatggatcaaacgacaccataatgttctgtcggatatggtatctctatctaactcattaatatctaggtctttactaatggtttttcta 30017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 249
Target Start/End: Original strand, 43375615 - 43375809
Alignment:
Q  56 ttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttct 155  Q
    |||||||||||||| | || | ||||||||||||||  | | |||||| |||||||||  | ||||| ||  |||||||| ||||||||||  | |||||    
T  43375615 ttatcccactaagtgggattggctacatggatcaaattatgtcataatgttctatcatgaaccatatttcggtccaactcattaatctctaaatctttct 43375714  T
Q  156 taatagtt-tttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctc 249  Q
    |||||||| ||||||  ||| | |||| |||||| ||||| || | || |||||| ||  |||||| || ||| | |||| | ||||||||||||    
T  43375715 taatagttatttctaggtctccctctgcctctagtgattttactatccaccatctgatctactctctttactacataatctataggtcttctctc 43375809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 43934369 - 43934455
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||| |||||| ||||||||| ||||||||| ||||||||| || |||||||  ||||| | ||| |  |||||||||||||    
T  43934369 ctacatggaacaaacgccgccataatgttctatcatctatcatatccctttccaactaattaatttgtagatccttcttaatagttt 43934455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 25979242 - 25979327
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | |||||||||| | ||||| |  |||||||||    
T  25979242 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactc 25979327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 1211016 - 1210952
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  1211016 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 1210952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 6084246 - 6084150
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||||||||   ||  | |||||||||||||  |||||||| | |||||||||| | ||||| |  ||||||||| ||||||||||    
T  6084246 caagccttatcccactaagtgagatcaaatacatggatcaaattacgccatattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 27072526 - 27072594
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||  |||||||||| |||||||||| | ||||| ||| |||||||| ||||| ||||    
T  27072526 ctacatggatcaaattacgccataatgttctatcataaaccatatttctgtccaactctttaatttcta 27072594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 29577523 - 29577459
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  29577523 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 29577459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 30202141 - 30202205
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  30202141 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 30202205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 39797272 - 39797212
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctat 110  Q
    |||||||||| ||||||||| |||| || |||||| |||||| ||||||||||| ||||||    
T  39797272 caagccttattccactaagtggaattgattacatgaatcaaatgacgccataatgttctat 39797212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 40568421 - 40568485
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||| ||||||||||||    
T  40568421 caagccttatcccactaagtggggttggctacatggatcaaattacgccatagttttctatcata 40568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 49347404 - 49347468
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  49347404 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 49347468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 51602327 - 51602263
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| |||||||| || ||||||||||    
T  51602327 caagccttatcccactaagtggggttggctacatggatcaaatgacgccatgatgttctatcata 51602263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 2545145 - 2545192
Alignment:
Q  85 gatcaaacgacgccataattttctatcatatatcatatctctatccaa 132  Q
    ||||||||||| ||||||| ||||||||||||||||||| || |||||    
T  2545145 gatcaaacgacaccataatgttctatcatatatcatatccctctccaa 2545192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 12135943 - 12135864
Alignment:
Q  86 atcaaacgacgccataattttctatcatata-tcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||| |||||||  ||||||||| | | |||  |||||||||||| ||||||||||| | ||||||||||||||    
T  12135943 atcaaacgaccccataatgctctatcataaaattataattctatccaactcattaatctctagatttttcttaatagttt 12135864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 12231571 - 12231524
Alignment:
Q  115 tatcatatctctatccaactcgttaatctctaggtatttcttaatagt 162  Q
    ||||||||||||||||||||| |||||||| || | ||||||||||||    
T  12231571 tatcatatctctatccaactcattaatctcgagatctttcttaatagt 12231524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 22319856 - 22319931
Alignment:
Q  56 ttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatcca 131  Q
    |||||||||||||| | || | || |||| || ||||||| |||| || ||||||| |||||||||||||||||||    
T  22319856 ttatcccactaagtgggatcggctgcatgtattaaacgacaccatgatattctatcgtatatcatatctctatcca 22319931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 40416595 - 40416528
Alignment:
Q  97 ccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||| |||||||||| | ||||| || ||||||||| ||||||| ||| | ||||||||||||||    
T  40416595 ccataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatagttt 40416528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 48861391 - 48861485
Alignment:
Q  55 cttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatat--catatctctatccaactcgttaatctctag 147  Q
    ||||||||||||||| |  | | | ||||| ||||||||||| ||||||  ||||||| ||||  ||||| |||||||||||| |||||||||||    
T  48861391 cttatcccactaagtggggtcggcgacatgaatcaaacgacgtcataatgctctatcaaatataccatatttctatccaactcattaatctctag 48861485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 9599433 - 9599519
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||  |||||||||  |||||||||| | |||||||  ||| ||||| |||| |||||  |||||| |||||||||    
T  9599433 ctacatggatcaaattacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagttt 9599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 28528598 - 28528512
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||| |||||||||||||||| |  ||||||| | | ||| ||| | |||||||| ||||||||||| |  |||||||||||||    
T  28528598 ctacatgaatcaaacgacgccatagtggtctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaatagttt 28528512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 39515907 - 39515993
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||| |||||||| | |||||||| ||||| ||||   ||||| |  ||||||||| ||||| ||||||| ||||||||||||||    
T  39515907 ctacatagatcaaacaatgccataatgttctaccataatccatattttgatccaactcattaatttctaggtttttcttaatagttt 39515993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 2544749 - 2544641
Alignment:
Q  158 atagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcc 257  Q
    ||||||||||||  ||||| |||  |||||| | |||||| | ||||||||| ||  ||||||||| |||||||||| | |||||||||||| | ||| |    
T  2544749 atagtttttctaggtcttcctctacctctagtg-tttgactatcctccatctgatctactctccttactatagaatctataggtcttctctctacatgtc 2544651  T
Q  258 caaatcacct 267  Q
    |||| |||||    
T  2544650 caaaccacct 2544641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 15086193 - 15086108
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||||||||||||||||||| |  | | |||||||||||||| |||| |||| | |||||||| | ||||||| |  |||||||||    
T  15086193 caagccttatcccactaagtggggttggctacatggatcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactc 15086108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 52814305 - 52814350
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgac 95  Q
    ||||||||| |||||||||| | |||| ||||||||||||||||||    
T  52814305 caagccttaacccactaagtgggataggctacatggatcaaacgac 52814350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 19908046 - 19908142
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    |||||||||||||||||||| |  | | |||||||||| |||  |||| ||||| ||| |||||| | ||||| |  ||||||||| ||||||||||    
T  19908046 caagccttatcccactaagtggggtcggctacatggataaaattacgcaataatgttcaatcataaaccatatttgaatccaactcattaatctcta 19908142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 28090705 - 28090769
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||| ||||||||||||||| |  | | ||||||||||||||  |||||||||| ||||||||||    
T  28090705 caagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcata 28090769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 34792360 - 34792424
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||| ||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  34792360 caagccttatcccattaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 34792424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 37462887 - 37462947
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctat 110  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||||| ||||||    
T  37462887 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctat 37462947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 38807682 - 38807770
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgtt 138  Q
    |||||||||||||||||||| |  | | ||||||||| ||||  |||||||| | |||||||||| | ||||| |  ||||||||||||    
T  38807682 caagccttatcccactaagtggggtcggctacatggaacaaattacgccatagtgttctatcataaaccatatttggatccaactcgtt 38807770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 42337827 - 42337763
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| || |||||| | ||||||||||    
T  42337827 caagccttatcccactaagtggggttggctacatggatcaaatgatgccatagtgttctatcata 42337763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 44941787 - 44941851
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||| | ||||||||||    
T  44941787 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcata 44941851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 52921351 - 52921287
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||| ||| | ||||||||||    
T  52921351 caagccttatcccactaagtggggtcggctacatggatcaaatgacgcaatagtgttctatcata 52921287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 37228321 - 37228239
Alignment:
Q  82 atggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||| |||| || ||||||||||||||    
T  37228321 atggatcaaacgacgccataatgttctaccatttatcatatctttatccaactcgttaatttctaagtctttcttaatagttt 37228239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 46431690 - 46431804
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  | | | |||||||||||||||||||  ||| ||| ||||||||| ||||||||||||||||| ||||||||||| |    
T  46431690 caagccttatcccactaagtggggttggcgacatggatcaaacgacgcctcaatgttccatcatatataatatctctatccaactcattaatctctagat 46431789  T
Q  150 atttcttaatagttt 164  Q
     ||| ||||||||||    
T  46431790 cttttttaatagttt 46431804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 286
Target Start/End: Complemental strand, 36304209 - 36304002
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaattcttca 177  Q
    ||||||||||||||  |||||||||| | |||||||| | ||||| |  ||||||||| ||||||||||| | ||||||||||||||| |||  ||| ||    
T  36304209 ctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttttactaggtctaca 36304110  T
Q  178 tctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcaccttacctaagtt 277  Q
     ||| ||||||  || |||| |||||| |||| ||  | ||||||| ||| || ||| |||||||||||||| | ||||||||  || || |||| ||||    
T  36304109 actgcctctagtaatctgactaccctctatctgatctattctccttactaaagcatctacaggtcttctctctacatgcccaacccatctaacct-agtt 36304011  T
Q  278 tccaccatc 286  Q
    |||||||||    
T  36304010 tccaccatc 36304002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 164
Target Start/End: Original strand, 37598207 - 37598295
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||  ||||| ||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||| ||| ||||||||||||    
T  37598207 gactacatgagtcaaatgacgccataatgttctatcatatatcatacccctatccaactcattaatctctagatatatcttaatagttt 37598295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 21427595 - 21427707
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||| ||||||||||||||||| || |||||||||||||||||||||||| |||    | ||||| |||| ||||||||||||||| |  ||||||||||    
T  21427595 caagtcttatcccactaagtaggattgactacatggatcaaacgacgccacaatgccttgtcataaatcaaatctctatccaactcat--atctctaggt 21427692  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  21427693 ctttcttaatagttt 21427707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 43308805 - 43308719
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||| || ||| || || ||||||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||    
T  43308805 ctacatggatcaaccggcgcaattatgttctatcatatatcatatctctatccaactgattaatctctagatttttcttaatagttt 43308719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 55244518 - 55244441
Alignment:
Q  81 catggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaa 158  Q
    ||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||| ||||||||||| | ||||||||    
T  55244518 catggatcaaacgacaccataatgttctatcatataccatatttctatccaactcattaatctctagatttttcttaa 55244441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 37228167 - 37228085
Alignment:
Q  82 atggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||||||||| ||||| ||| |||||||||| |||| ||||| ||||| |||| || ||||||||||||||    
T  37228167 atggatcaaacgacgccataatgttctaccatttatcatatctttatctaactcattaatttctaagtctttcttaatagttt 37228085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 46367426 - 46367495
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||  |||||||||| || ||||||||    
T  46367426 ctacatggatcaaacgacgtcataatgttctatcatatatcatatccttatccaactcattcatctctag 46367495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 2340759 - 2340842
Alignment:
Q  81 catggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||| |||||||||| ||||||||||||||||  | || ||| |||| ||||||||||| | ||||||||||||||    
T  2340759 catggatcaaacaacgccataatgttctatcatatatcattaccctctccgactcattaatctctagatctttcttaatagttt 2340842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 39535440 - 39535570
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgtt-aatctctaggtatttcttaatagtttttctaattcttca 177  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||  |||||||||| ||  | | |||| |  |||||||||||||| |||| ||| |     
T  39535440 tacatggatcaaacgccaccataatgttctatcatatatcatatccttatccaactcattgcaacactagatccttcttaatagttttactaagtctact 39535539  T
Q  178 tctgtctctagagatttgaccaccctccatc 208  Q
    |||| |||||| |||||||| || |||||||    
T  39535540 tctgcctctagtgatttgactactctccatc 39535570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 41971283 - 41971376
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctct 145  Q
    ||||||||||| ||||||| || | | ||||||||||||||| ||| |||||| |||||||||||||||||| ||| | |||||| |||||||||    
T  41971283 aagccttatcc-actaagtggagttggctacatggatcaaacaacgtcataatgttctatcatatatcatatttctgtacaactcattaatctct 41971376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 143
Target Start/End: Complemental strand, 659796 - 659703
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatct 143  Q
    ||||||||| |||||||||| |  | | |||||||||||||||   |||||||| ||||||||||||| ||||| ||||||||||| |||||||    
T  659796 caagccttaccccactaagtggggtcggctacatggatcaaacactgccataatgttctatcatatataatatccctatccaactcattaatct 659703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 164
Target Start/End: Original strand, 23534607 - 23534695
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||||  |||||||||| |||||||||| |||||||  |  |||||||| |||||||||| || |||| |||||||||    
T  23534607 gactacatggatcaaattacgccataatgttctatcataaatcatattacagtccaactcattaatctctaagtctttcctaatagttt 23534695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 168
Target Start/End: Original strand, 29337587 - 29337698
Alignment:
Q  59 tcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctc--tatccaactcgttaatctctaggtatttctt 156  Q
    ||||| ||||||| || | ||||||||| |||||||||  ||||| |||  ||||||||||||||||  |||||||||| |||||||| | || ||||||    
T  29337587 tcccattaagtaggatcggctacatggaccaaacgacgatataatattccgtcatatatcatatctctatatccaactcattaatctcgaagtctttctt 29337686  T
Q  157 aatagtttttct 168  Q
     |||||||||||    
T  29337687 tatagtttttct 29337698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 29475953 - 29475843
Alignment:
Q  54 ccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtattt 153  Q
    |||||||||||||| | || | | ||| |||| |||||  |||||||| |||||||||||| |  |||| || ||||||||| ||||||||||| | |||    
T  29475953 ccttatcccactaactggagttggctagatgggtcaaattacgccatagttttctatcataaacaatatttcaatccaactcattaatctctagatcttt 29475854  T
Q  154 cttaatagttt 164  Q
    |||||||||||    
T  29475853 cttaatagttt 29475843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 49841859 - 49841773
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||  | |||||||| |||||||||||| ||||| || ||||||||| ||||||| ||| | ||| ||||||||||    
T  49841859 ctacatggatcaaattatgccataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagttt 49841773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 27893359 - 27893246
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggta 150  Q
    ||||||||||||||||||| | || | ||||||| ||||||| | |||||| | |||| ||| | ||||| ||| | |||||||| |||||||||||||     
T  27893359 aagccttatcccactaagtgggatcggctacatgaatcaaacaatgccatagtgttctttcaaaaatcatgtctttctccaactcattaatctctaggtc 27893260  T
Q  151 tttcttaatagttt 164  Q
     || ||||||||||    
T  27893259 ctttttaatagttt 27893246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 41425378 - 41425463
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||||  |||||| |||||||||||| || ||| ||||||||||| ||||| ||||  | ||| ||||||||||    
T  41425378 tacatggatcaaacgacatcataatattctatcatatagcacatccctatccaactcattaatatctaaatgttttttaatagttt 41425463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 11284231 - 11284163
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||||| || ||||| ||| |||||||| ||||| | |||||||||| ||||||||||    
T  11284231 ctacatggatcaaacgatgcaataatgttcaatcatataccatatttatatccaactcattaatctcta 11284163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 32052433 - 32052501
Alignment:
Q  77 actacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctct 145  Q
    |||||||||| |||| ||||| ||||| |||||||||| ||||||||||||| |||||| ||| |||||    
T  32052433 actacatggaccaaatgacgcaataatgttctatcatacatcatatctctattcaactcattagtctct 32052501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 5852346 - 5852397
Alignment:
Q  81 catggatcaaacgacgccataattttctatcatatatcatatctctatccaa 132  Q
    |||||||||||||||| ||||||  ||||||||||||||||| |||||||||    
T  5852346 catggatcaaacgacgtcataatactctatcatatatcatatttctatccaa 5852397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 19758157 - 19758039
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |  ||||||| |||||||||| | |||||    ||||||||| ||||||||||  |    
T  19758157 caagccttatcccactaagtggggtcg-ctacatggatcaaattataccataatgttctatcataaaccatattgagatccaactcattaatctctaaat 19758059  T
Q  150 atttcttaatagtttttcta 169  Q
    ||||| ||||||||||||||    
T  19758058 atttcctaatagtttttcta 19758039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 7942924 - 7942864
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatc 111  Q
    ||||||||||||||||||| | || ||||||||||||| ||| || ||||||| |||||||    
T  7942924 aagccttatcccactaagtggtatcgactacatggatcgaacaacaccataatgttctatc 7942864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 12096716 - 12096780
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  12096716 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 12096780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 21200787 - 21200698
Alignment:
Q  80 acatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaat 171  Q
    ||||| ||||||||||||||||||  ||||| |||   ||||| |||||||||||| ||||| ||||| | ||||| |||||||| ||||||    
T  21200787 acatgcatcaaacgacgccataatgctctataatac--catatttctatccaactcattaatatctagatctttctaaatagtttgtctaat 21200698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 47555343 - 47555407
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  47555343 caagccttatcccactaagtggggttggctacatggatcaaatgacgccatagtgttctatcata 47555407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 47789135 - 47789003
Alignment:
Q  81 catggatcaaacgacgccataattttctatcatatat----catatctctat--ccaactcgttaatctctaggtatttcttaatagtttttctaattct 174  Q
    |||||| ||||| ||| |||||  |||||||||||||    |||||||||||  ||||||  ||||| | ||| | |||||||||||||||||||| |||    
T  47789135 catggaccaaacaacgtcataacgttctatcatatatataacatatctctatatccaacttattaatatatagatttttcttaatagtttttctaagtct 47789036  T
Q  175 tcatctgtctctagagatttgaccaccctccat 207  Q
    || |||||||||   ||||| || |||||||||    
T  47789035 tcctctgtctcttttgatttcactaccctccat 47789003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 47804720 - 47804788
Alignment:
Q  96 gccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||| |||||||||||| ||| ||||||| |||||| ||||||||||  | ||||||||| ||||    
T  47804720 gccataatgttctatcatatagcatgtctctattcaactcattaatctctaaatctttcttaatcgttt 47804788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 147
Target Start/End: Complemental strand, 6988172 - 6988075
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctat--catatatcatatctctatccaactcgttaatctctag 147  Q
    |||||||||||||||||   || | | |||||| ||||||| |||||||||||  |||||  |||||| ||||| |||||||||||| |||||||||||    
T  6988172 aagccttatcccactaaaaggagtcggctacattgatcaaatgacgccataatgatctatatcatataccatat-tctatccaactcattaatctctag 6988075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 21862752 - 21862843
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaat 141  Q
    ||||||||||| |||||||| |  | | |||||||||||||| ||| ||||| | |||||||  ||||||||| ||||||||| || |||||    
T  21862752 caagccttatctcactaagtggggtcggctacatggatcaaatgacaccatattcttctatccaatatcatatttctatccaattcattaat 21862843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 33307247 - 33307188
Alignment:
Q  190 gatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctc 249  Q
    |||||||| ||||||||||| ||| ||||| ||| |||||||||| ||| ||||||||||    
T  33307247 gatttgactaccctccatctgatttactcttcttcctatagaatctacatgtcttctctc 33307188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 50237673 - 50237760
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttt 165  Q
    ||||||||||||||||  ||  |||| ||||||||||||  |||| ||||||||||||  ||||||||   | |||||||||||||||    
T  50237673 ctacatggatcaaacggagcagtaatgttctatcatatacaatatttctatccaactcaataatctctgaatctttcttaatagtttt 50237760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 5169103 - 5169041
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||    
T  5169103 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 5169041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 8476067 - 8476137
Alignment:
Q  94 acgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||  ||||||||||| ||||||||||||||| |  ||||||| ||| | |||||||| |||||    
T  8476067 acgccataatactctatcatataccatatctctatccaaattattaatctttagatctttcttaaaagttt 8476137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 34719127 - 34719205
Alignment:
Q  86 atcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||| ||||||||  ||||||||||||| |||||| |||||| || ||||| ||||| | | || |||||||||    
T  34719127 atcaaacgaagccataatgctctatcatatatcgtatctcaatccaaatcattaatttctagatttgtcctaatagttt 34719205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 45289102 - 45289216
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  | | | ||||||||||||  | || ||||| |||||||||| | ||||| |  ||||||||| ||||||||||  |    
T  45289102 caagccttatcccactaagtggggttggcgacatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcattaatctctaaat 45289201  T
Q  150 atttcttaatagttt 164  Q
     |||| |||||||||    
T  45289202 ctttcctaatagttt 45289216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 7278734 - 7278653
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaa 132  Q
    |||| |||||||||||||| |  | | |||||||||||||| ||||  ||||| |||||| |||||||||||| | ||||||    
T  7278734 aagctttatcccactaagtggggtcggctacatggatcaaatgacgttataatgttctataatatatcatatcccgatccaa 7278653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 41452816 - 41452865
Alignment:
Q  115 tatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||| | |||||||||| ||||||||||| | ||||||||||||||    
T  41452816 tatcatatatttatccaactcattaatctctagatctttcttaatagttt 41452865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 48508506 - 48508421
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||| | |||||||||| | ||||| |  |||||||||    
T  48508506 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactc 48508421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 49503579 - 49503632
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataat 103  Q
    ||||||||||||||||||||||  | | ||||||||||||||  ||||||||||    
T  49503579 caagccttatcccactaagtagggtcggctacatggatcaaattacgccataat 49503632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 311320 - 311404
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaact 134  Q
    |||||||||||||||||||| |  | | ||||||| |||||| ||||||||| | |||||||| | | |||||||  ||||||||    
T  311320 caagccttatcccactaagtggggtcggctacatgtatcaaatgacgccatagtgttctatcaaaaaccatatctggatccaact 311404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 388273 - 388369
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    |||||||||||||||||||| |  | | |||||| |||||||  ||| ||||||  ||||||||||| | ||| ||||||  |||| ||||||||||    
T  388273 caagccttatcccactaagtggggttggctacattgatcaaattacgtcataatgctctatcatataccgtatttctatcttactcattaatctcta 388369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 2133623 - 2133687
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | || |||||||||||||  |||||||| | ||||||||||    
T  2133623 caagccttatcccactaagtggggtcgagtacatggatcaaatcacgccatagtgttctatcata 2133687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 7895891 - 7895955
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||| ||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  7895891 caagccttatcccattaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 7895955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 41842560 - 41842652
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttct 168  Q
    ||||||||||||||||  || ||||||| |||||||| | | ||||| || ||| ||||| |||| |||||| | | |||| |||||||||||    
T  41842560 gactacatggatcaaattacaccataatgttctatcaaaaaccatatttcaatctaactcattaacctctagatctatctttatagtttttct 41842652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 42026591 - 42026639
Alignment:
Q  94 acgccataattttctatcatatatcatatctctatccaactcgttaatc 142  Q
    |||||||||| |||||||||||| ||||| |||||| ||||| ||||||    
T  42026591 acgccataatgttctatcatataccatatttctatctaactcattaatc 42026639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 54128650 - 54128586
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||||||||||  | |||||||| ||||||||||    
T  54128650 caagccttatcccactaagtggggtcgcctacatggatcaaattatgccataatgttctatcata 54128586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 169
Target Start/End: Original strand, 25454 - 25574
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||||||| |||| | || |||||||| |||||||||| |||||||| || ||||||||| | ||| |||||||||||| ||||||||||  |    
T  25454 caagccttatcccacaaagtgggattgactacatagatcaaacgaagccataatgttttatcatataacttatttctatccaactcattaatctctaaat 25553  T
Q  150 -atttcttaatagtttttcta 169  Q
     |||| |||||||||||||||    
T  25554 cattttttaatagtttttcta 25574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 3645352 - 3645243
Alignment:
Q  55 cttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttc 154  Q
    |||||| || ||||||| || | |||||||||||||  ||| ||||||| |||||||| |||||||||||| |||| |||| ||||||||||||| ||||    
T  3645352 cttatctcattaagtaggatcggctacatggatcaatggacaccataatattctatcacatatcatatctccatcctactcattaatctctaggtctttc 3645253  T
Q  155 ttaatagttt 164  Q
    |||| |||||    
T  3645252 ttaacagttt 3645243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 12611768 - 12611671
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||||||||||||||||| | | || | |||||||||||||||||| ||||||  ||||| |||||||||||| |||| ||||||| || ||||||||    
T  12611768 caagccttatcccactaattgggatcggctacatggatcaaacgacaccataaagttctaacatatatcatatttctacccaactcatttatctctag 12611671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 23023467 - 23023382
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||||| |||||| |||||||||||||||| |  ||||||||||| ||||||| ||| | ||||||| ||||||    
T  23023467 tacatggatcaaacgacgtcataatattctatcatatatcatgttcctatccaactcattaatctgtagatctttcttagtagttt 23023382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 26055692 - 26055595
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||||||||||||||||||| | || | |||||||||||||||| |  |||||| ||| ||||||||||||| | ||||||| ||| |||||||||||    
T  26055692 caagccttatcccactaagtgggatcggctacatggatcaaacgccatcataatgttcaatcatatatcatacccctatccatctcattaatctctag 26055595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 38689869 - 38689769
Alignment:
Q  108 tatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaattcttcatctgtctctagagatttgaccaccctccat 207  Q
    |||||||||||||||| |||| |||||| |||||||||||||  ||||||||||||||||||| |  || | || |||||| |||||||| || ||||||    
T  38689869 tatcatatatcatatccctatgcaactcattaatctctaggtcattcttaatagtttttctaaatagtcctatgcctctagtgatttgactactctccat 38689770  T
Q  208 c 208  Q
    |    
T  38689769 c 38689769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 163
Target Start/End: Original strand, 39760447 - 39760558
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggta 150  Q
    ||||||||||||||| | ||  || | ||||||||||||| || ||||| ||| ||| ||||||||||||||||||||||||||  |||||||||||       
T  39760447 aagccttatcccacttaataagattggctacatggatcaa-cggcgccacaatattcaatcatatatcatatctctatccaacttattaatctctagagt 39760545  T
Q  151 tttcttaatagtt 163  Q
    |||||||||||||    
T  39760546 tttcttaatagtt 39760558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 10109037 - 10108970
Alignment:
Q  97 ccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  10109037 ccataatgttctatcatataacatatctctatcaaactcgttaatctctagatctttcttattagttt 10108970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 25117528 - 25117446
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaata 160  Q
    ||||||||||||||| | | |||||| |||||||||||||||| ||||||||||||  | |||||||||| ||||| ||||||    
T  25117528 ctacatggatcaaacaatgtcataatgttctatcatatatcatttctctatccaacctggtaatctctagatatttgttaata 25117446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 39967538 - 39967624
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||| |||||||||| ||||| |||| |  ||||||| ||||||||| |||||| |||| | ||||||||||||||    
T  39967538 ctacatggatcaaactacgccataatgttctaacataaactatatctcaatccaactcattaatcgctagatctttcttaatagttt 39967624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 79269 - 79184
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||||||||| || |||||||| |   ||||| |||||||| ||| ||||||||||| | ||||||||||||||    
T  79269 tacatggatcaaacgacgccattatgttctatcacaggccatatttctatccagctcattaatctctagatctttcttaatagttt 79184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 23492305 - 23492184
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||| |||||||| |  | | |||||||||| ||| ||| ||||| | |||||||||||||||||| |||||||||||| |||||| |||  |    
T  23492305 caagccttatctcactaagtggggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcattaatcgctacat 23492206  T
Q  150 atttcttaatagtttttctaat 171  Q
     ||||| | |||||| ||||||    
T  23492205 ctttctgagtagtttctctaat 23492184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 37826529 - 37826461
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||||||||| || ||||||||  ||||||||||| ||||| ||||||||||||| ||||||||||    
T  37826529 tacatggatcaaatgatgccataatactctatcatataccatatttctatccaactcgctaatctctag 37826461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 10079973 - 10080036
Alignment:
Q  105 ttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttct 168  Q
    |||||||| ||||||||| |||||||||||| ||||||||||| | |||||||| |||||||||    
T  10079973 ttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttct 10080036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 16715544 - 16715449
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctct 145  Q
    ||||||| ||||||||||| ||  | | |||| ||||||||||  ||||||||| ||||||||||||||||||| ||||| ||| | |||||||||    
T  16715544 caagcctaatcccactaagcagggtcggctacgtggatcaaacaccgccataatgttctatcatatatcatatccctatcaaacccattaatctct 16715449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 39389057 - 39388940
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatata---tcatatctctatccaactcgttaatctcta 146  Q
    ||||| |||||||||||||| |  | | | |||||||||||||||||||||||| ||||| || |||   || ||| |||||||||||| ||||||||||    
T  39389057 caagctttatcccactaagtggggttggccacatggatcaaacgacgccataatcttctaccaaatagtttcttatttctatccaactcattaatctcta 39388958  T
Q  147 ggtatttcttaatagttt 164  Q
    | | |||| |||||||||    
T  39388957 gatctttcctaatagttt 39388940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 11733986 - 11733904
Alignment:
Q  82 atggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||| |||||||||||||||||  ||||||| ||| ||||| |||||| ||||| ||||||||||| | |||||| |||||||    
T  11733986 atggttcaaacgacgccataatgctctatcacataccatatttctatctaactcattaatctctagatttttctttatagttt 11733904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 38178331 - 38178385
Alignment:
Q  110 tcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||||    
T  38178331 tcatatatcatatctctatccaactcattaatgtctaggtctttgttaatagttt 38178385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 12692251 - 12692364
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||| | |||| | || | ||||| |||||||| |||||| |||||  ||||  ||| | |||||| ||| || ||||||||||||    
T  12692251 caagccttatcccactaattggaatcggctgcgtggattaaacgacggcataatgttctactatatgccatttttctatctaacccggtaatctctaggt 12692350  T
Q  150 atttcttaatagtt 163  Q
     |||||||||||||    
T  12692351 ctttcttaatagtt 12692364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 490606 - 490510
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||||| |||||||||| | ||||| |  ||||||||| | ||||||||    
T  490606 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatcaatctcta 490510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 27037875 - 27037792
Alignment:
Q  81 catggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||  |||||||||| |||||||| ||| ||||| |||||||||||| ||||||| ||  | |||| |||||||||    
T  27037875 catggatcaaaaaacgccataatattctatcaaataccatatttctatccaactcattaatctttatatctttcctaatagttt 27037792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 30748706 - 30748641
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatct 143  Q
    |||||||||||||| |||  |||||| ||| || ||||||||||| |||||||||||| |||||||    
T  30748706 ctacatggatcaaatgacatcataatgttcaattatatatcatatttctatccaactcattaatct 30748641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 11523734 - 11523798
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  11523734 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 11523798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 21425289 - 21425221
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||  | ||||||||  ||||||||| ||||||| || ||||||||| ||||||||||    
T  21425289 ctacatggatcaaattatgccataatggtctatcataaatcatatttcgatccaactcattaatctcta 21425221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 29520892 - 29520824
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||  |||||||||| |||||||||| | ||||| |  ||||||||| ||||||||||    
T  29520892 ctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaatctcta 29520824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 38391934 - 38392018
Alignment:
Q  80 acatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||| |||  |||||||||| |||||||||||| ||||| || |||| |||| ||||||| ||| | ||||||||| ||||    
T  38391934 acatggatgaaattacgccataatattctatcatataccatatttcgatcccactcattaatctgtagatctttcttaatggttt 38392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 286
Target Start/End: Original strand, 41971849 - 41972037
Alignment:
Q  98 cataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaattcttcatctgtctctagagatttgac 197  Q
    |||||| |||||||||| |  |||| ||  |||||||| ||||||||||  | ||||||| |||||||||||  | ||| | || |||||| ||||||||    
T  41971849 cataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagtttttctaggttttcctttgcctctagtgatttgac 41971948  T
Q  198 caccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcaccttacctaagtttccaccatc 286  Q
     | | |||| || ||  ||||||||| ||| | |||| ||| |||||||||| | ||| ||||| ||||| | || | |||||||||||    
T  41971949 tatcgtccacctgatctactctccttgctagaaaatctacacgtcttctctctacatgtccaaaccacctaaacttattttccaccatc 41972037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 43904704 - 43904772
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||  |||||||||| |||||||||| | ||||| |  ||||||||| ||||||||||    
T  43904704 ctacatggatcaaattacgccataatgttctatcataaaccatatttagatccaactcattaatctcta 43904772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 5908797 - 5908706
Alignment:
Q  158 atagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctc 249  Q
    ||||||||||||  ||||| | ||||||||| ||| |||||| |||||| || ||  ||||||||| ||| | |||| ||||||||||||||    
T  5908797 atagtttttctaggtcttcctatgtctctagtgatctgaccatcctccacctgatctactctccttactacaaaatctacaggtcttctctc 5908706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 6483566 - 6483447
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||| |||||||||||||  |   ||||||||||||||| |||| ||||| |||||||  | |||  ||||| |||||| || |||| || ||  |    
T  6483566 caagccttttcccactaagtagggtcagctacatggatcaaacaacgcgataatattctatcgaacatctcatctcaatccaattcattaacctttaaat 6483467  T
Q  150 atttcttaatagtttttcta 169  Q
     |||||||||||||||||||    
T  6483466 ctttcttaatagtttttcta 6483447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 12491150 - 12491213
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    ||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  12491150 aagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 12491213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 16705975 - 16705904
Alignment:
Q  94 acgccataattttctatc-atatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||| ||| ||| ||||| ||||| || ||||||||| ||||||||||| | ||||||||||||||    
T  16705975 acgccataatgttccatccatataccatatttcgatccaactcattaatctctagctttttcttaatagttt 16705904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 33666650 - 33666693
Alignment:
Q  119 atatctctatccaactcgttaatctctaggtatttcttaatagt 162  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||    
T  33666650 atatctctatcaaactcattaatctctaggtctttcttaatagt 33666693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 35914732 - 35914823
Alignment:
Q  158 atagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctc 249  Q
    ||||||||||||  ||||| ||||||||||| ||| |||| | ||||||||| |   ||||||||| ||||| |||| | ||||||||||||    
T  35914732 atagtttttctatgtcttcctctgtctctagggatctgactatcctccatctgacctactctccttgctataaaatctataggtcttctctc 35914823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 44175346 - 44175275
Alignment:
Q  87 tcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaa 158  Q
    |||||||| || || || || |||||||||||||||||||| ||||||| | ||||||||| | ||||||||    
T  44175346 tcaaacgaagcgatgatgttttatcatatatcatatctctacccaactcatcaatctctagatctttcttaa 44175275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 14742093 - 14742155
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||    
T  14742093 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 14742155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 17491693 - 17491779
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||   |||||||||| |||||||||| | ||||| |   |||||||| |||||||| | || ||||||||||||||    
T  17491693 ctacatggatcaacatacgccataatgttctatcataaaccatattttggtccaactcattaatctccaagtctttcttaatagttt 17491779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 30198277 - 30198371
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctc 144  Q
    |||||||||||||||||||| |  | | | |||| |||||||| || ||||||| |||||||||| | |||||  | ||||||||| ||||||||    
T  30198277 caagccttatcccactaagtggggtcggcaacatagatcaaactacaccataatattctatcataaaccatattccgatccaactcattaatctc 30198371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 1928598 - 1928659
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatc 111  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||||| |||||||    
T  1928598 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatc 1928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 16917399 - 16917358
Alignment:
Q  105 ttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    |||||||||||| ||||| |||||||||||| ||||||||||    
T  16917399 ttctatcatataccatatttctatccaactcattaatctcta 16917358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 43733477 - 43733416
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatc 111  Q
    |||||||||||||||||||| | || | ||||||| || ||||||||||||| | |||||||    
T  43733477 caagccttatcccactaagtgggatcggctacatgaatgaaacgacgccatagtgttctatc 43733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 1549431 - 1549499
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||||||||||||||| |   |||| ||||| |||||||||| |  ||||||||||| |||||||||||    
T  1549431 tacatggatcaaacgatgtagtaatgttctaccatatatcatgttgctatccaactcattaatctctag 1549499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 3464182 - 3464246
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||| ||||||||| ||||| |||| ||||| ||||||||||| |  ||||||| ||||||||||    
T  3464182 caagtcttatcccattaagtggaatcgactatatggatcaaactataccataatgttctatcata 3464246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 4011324 - 4011240
Alignment:
Q  80 acatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||| |||||||| | | |||||| ||||||| |||  || |||| |||||||||| ||||||| ||| | ||||||||||||||    
T  4011324 acattgatcaaacaatgtcataatgttctatcgtattccacatctttatccaactcattaatctttagatctttcttaatagttt 4011240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 25473414 - 25473478
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||| ||| | ||||||||||    
T  25473414 caagccttatcccactaagtggggtcggctacatggatcaaatgacgctatagtgttctatcata 25473478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 29700426 - 29700318
Alignment:
Q  159 tagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgccc 258  Q
    |||||||||||  ||||| |||  |||||| ||| |||| | ||||||||||||  ||||||||| ||| |||||| |  |||||| |||| | ||||||    
T  29700426 tagtttttctaggtcttcctctacctctagtgatatgactatcctccatctaatctactctccttactacagaatccaatggtcttttctctatatgccc 29700327  T
Q  259 aaatcacct 267  Q
    ||| |||||    
T  29700326 aaaccacct 29700318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 36545420 - 36545356
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| |||| |||| | ||||||||||    
T  36545420 caagccttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcata 36545356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 44529496 - 44529432
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| || |||||| | ||||||||||    
T  44529496 caagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcata 44529432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 45419506 - 45419442
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||||||||||  || ||||||| ||||||||||    
T  45419506 caagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctatcata 45419442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 41483753 - 41483644
Alignment:
Q  55 cttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttc 154  Q
    ||||||||||||||| |  | | |||||||||||| | ||| ||||||  ||||| |||||||||||||| |||||||||||||||| ||||| | ||||    
T  41483753 cttatcccactaagtggggtcggctacatggatcatatgacaccataaagttctaccatatatcatatctatatccaactcgttaatttctagatctttc 41483654  T
Q  155 ttaatagttt 164  Q
    ||||||||||    
T  41483653 ttaatagttt 41483644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 286
Target Start/End: Original strand, 40008470 - 40008676
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaattcttca 177  Q
    ||||||||||||||| ||| |||||| |||||||||||||||| |||||||||||||| ||||||| ||  | | ||||  |||| ||| ||| |||||     
T  40008470 ctacatggatcaaacaacgacataatgttctatcatatatcatgtctctatccaactcattaatctataaatttctctt-gtagtgtttttaagtcttcc 40008568  T
Q  178 tctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcaccttacctaagtt 277  Q
    |||  |||||  ||||| || | ||||||||||||  ||||||||||| | | |||||| |||| || |||| | ||||||||| ||||| | |  ||||    
T  40008569 tctacctctaatgatttaactatcctccatctaatctactctcctttcaacaaaatcaataggt-ttatctctacatgcccaaaccacctaatccgagtt 40008667  T
Q  278 tccaccatc 286  Q
    |||||||||    
T  40008668 tccaccatc 40008676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 12966287 - 12966173
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| | || | ||||||| ||||||| | | ||||||  | ||||||||| ||||| ||||||||| || ||||||||||  |    
T  12966287 caagccttatcccactaagtgggatcggctacatgaatcaaacaatggcataatgatttatcatataccatatttctatccaaatcattaatctctaaat 12966188  T
Q  150 atttcttaatagttt 164  Q
    |||||||||||||||    
T  12966187 atttcttaatagttt 12966173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 40138987 - 40139073
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||| |||| |||||| ||||||||||| |||||| |||||| ||| | ||||||||||| | ||||||||||||||    
T  40138987 ctacatggatcaaatgacgtcataatattctatcatatgtcatatttctatcaaacgcattaatctctagatctttcttaatagttt 40139073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 19262498 - 19262583
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||| |||||||  ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| |  |||| ||||||||    
T  19262498 tacatgaatcaaacaccgccataatgttctatcatatatcatatccctatccaactcattaatctctagatgcttctaaatagttt 19262583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 30914513 - 30914610
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||||||||||||||||||| |  | | | | ||||||||||||  |||||||  ||||||||||||||||||| ||||||||||| |||||||||||    
T  30914513 caagccttatcccactaagtggggttggcaatatggatcaaacgctgccataaagttctatcatatatcatatccctatccaactcattaatctctag 30914610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 36245267 - 36245376
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||| |||| || | || |||||| |||||||||||||| |||||| |||||||||||| ||||| |||||| |||| |||||||| ||  |    
T  36245267 caagccttatccaactatgtgggatcgactacgtggatcaaacgacgtcataatgttctatcatataccatat-tctatctaactagttaatctgtacat 36245365  T
Q  150 atttcttaata 160  Q
     ||||||||||    
T  36245366 ctttcttaata 36245376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 28627945 - 28628058
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggta 150  Q
    ||||||||||||||||||| || | | ||||||||||||||  |||||||||| |||||||||| | || || |  ||||||||| ||||||||||  |     
T  28627945 aagccttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaatc 28628044  T
Q  151 tttcttaatagttt 164  Q
    |||| |||||||||    
T  28628045 tttcctaatagttt 28628058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 27893574 - 27893746
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||| ||||||||||  | | ||||||| ||||||  | |||||||| |||||||||| | ||||| ||  |||| ||| ||||||||||  |    
T  27893574 caagccttatcgcactaagtagggtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctcattaatctctaaat 27893673  T
Q  150 atttcttaatagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcct 222  Q
     |||||||||||||||||||   |||| ||| ||||||| ||| |||  | ||||||||| ||  ||||||||    
T  27893674 ctttcttaatagtttttctaggacttcctctatctctagtgatctgaatatcctccatctgatctactctcct 27893746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 36101788 - 36101935
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  |  |||||||||||||||  ||| |||||| |||||||||| | ||||| |  ||||||||| ||||||| ||  |    
T  36101788 caagccttatcccactaagtggggtcaactacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcattaatctataaat 36101887  T
Q  150 atttcttaatagtttttctaattcttcatctgtctctagagatttgac 197  Q
     |||| ||||| ||||||||  ||||| |||| |||||| ||| ||||    
T  36101888 ctttcataataatttttctaggtcttcctctgcctctagtgatctgac 36101935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 22174243 - 22174157
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||| |||||||||| |||||||| ||| ||||| |||||| || || ||||||||||| | ||| || |||||||    
T  22174243 ctacatggatcaaacaacgccataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatagttt 22174157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 22349891 - 22349825
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatata 116  Q
    |||||||||||||||||||| |  | |||||||||||||||| ||||||||| | ||||||||||||    
T  22349891 caagccttatcccactaagtggggtcgactacatggatcaaatgacgccatagtattctatcatata 22349825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 24549728 - 24549813
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||| ||||||||| ||||  |||||||| ||| ||||| || ||||||||| ||||||||||| | ||||||||||||||    
T  24549728 ctacatggat-aaacgacgcaataagattctatcaaataccatatttcaatccaactcattaatctctagatctttcttaatagttt 24549813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 36239835 - 36239921
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||  |||||||||| |||||||||| | ||||| |  ||||||||||||||||||||  | |||| |||||||||    
T  36239835 ctacatggatcaaattacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagttt 36239921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 476046 - 475974
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatc 123  Q
    |||||||||||||||||||||||||  ||||| ||||||||||  ||||||||| ||||| |||| ||||||||    
T  476046 caagccttatcccactaagtagaatccactacttggatcaaacagcgccataatgttcta-cataaatcatatc 475974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 6807447 - 6807390
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||||||||||||||||||||||||| |||||||||| | ||||| |||||| |||||    
T  6807447 ctacatggatcaaacgacgccataatgttctatcatacaccatatttctatctaactc 6807390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 41578189 - 41578250
Alignment:
Q  105 ttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttttt 166  Q
    |||||||||||||||||||||||||||||||  |||||||||  | |||||||| |||||||    
T  41578189 ttctatcatatatcatatctctatccaactcactaatctctatatgtttcttaacagttttt 41578250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 7220999 - 7220931
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    |||||||||||||| || | ||||||||||||||| |||| |||||| |||||||| | ||||||||||    
T  7220999 ctacatggatcaaatgatgtcataattttctatcacatattatatctttatccaacacattaatctcta 7220931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 1569261 - 1569174
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtt 163  Q
    |||||||| |||||||  ||||| |||| |||||||||| | ||||| |  ||||||||| ||||||||||| | |||||||||||||    
T  1569261 gactacatcgatcaaattacgccgtaatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagtt 1569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 28541983 - 28542074
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttcta 169  Q
    ||||| ||||||||| | ||||| || |||||||||| | ||||  || ||||||||| ||||||||||  | |||||||||||||||||||    
T  28541983 ctacacggatcaaactatgccatgatgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagtttttcta 28542074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 31840501 - 31840450
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccata 101  Q
    ||||||||||||||||||||||  ||| ||||||| ||||||||||||||||    
T  31840501 caagccttatcccactaagtagggtaggctacatgaatcaaacgacgccata 31840450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 45601747 - 45601633
Alignment:
Q  50 caagccttatcccactaagtagaataga-ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctagg 148  Q
    |||||||||||||||||||| || |  | ||||||||||||||  || ||||| | |||||||||| ||||||| |  ||||||||| |||||||||||     
T  45601747 caagccttatcccactaagt-gagttcagctacatggatcaaattacaccatagtgttctatcataaatcatattttgatccaactcattaatctctaga 45601649  T
Q  149 tatttcttaatagttt 164  Q
    | ||||||||| ||||    
T  45601648 tctttcttaatggttt 45601633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 9797758 - 9797828
Alignment:
Q  91 acgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatag 161  Q
    ||||| ||| ||| || ||||||| |||||||||||||||||||| |||||||||| |  |||||||||||    
T  9797758 acgacaccacaatgttatatcatacatcatatctctatccaactcattaatctctatggttttcttaatag 9797828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 38607263 - 38607201
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    ||||||||| |||||||||| || | | |||||||||||||||||||||||| | ||||||||    
T  38607263 caagccttaacccactaagtggagtcggctacatggatcaaacgacgccatagtgttctatca 38607201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 40830444 - 40830359
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||| | || |||| |||||||||||||||||||  ||| |||||| ||||| ||||| |  |||||||||||||    
T  40830444 ctacatggatcaaacgcctccgtaatgttctatcatatatcatatc-atatacaactcattaatttctagatccttcttaatagttt 40830359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 30144904 - 30144835
Alignment:
Q  180 tgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctc 249  Q
    ||||||||| |||||||||||||||||||| ||  ||||| | | |||||||||| ||| ||||||||||    
T  30144904 tgtctctagtgatttgaccaccctccatctgatctactcttcgtactatagaatctacaagtcttctctc 30144835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 6375139 - 6375075
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  6375139 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 6375075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 11594231 - 11594167
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  11594231 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 11594167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 12841286 - 12841350
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  12841286 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 12841350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 21078188 - 21078124
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||| |  | | | |||||||||||||| ||||||||||| ||||||||||    
T  21078188 caagccttatcccactaaatgaagtcggctacatggatcaaatgacgccataatgttctatcata 21078124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 28208339 - 28208403
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  28208339 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 28208403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 29653619 - 29653671
Alignment:
Q  112 atatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||| |||||| ||||| ||||||||||| | ||||||||||||||    
T  29653619 atatatcatatttctatctaactcattaatctctagatctttcttaatagttt 29653671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 31682613 - 31682677
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  31682613 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 31682677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 34869691 - 34869627
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||| |||  | | |||||||||||||| ||||||||| | ||||||||||    
T  34869691 caagccttatcccactaattagggtcggctacatggatcaaatgacgccatagtgttctatcata 34869627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 35906212 - 35906276
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  35906212 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 35906276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 39906383 - 39906447
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  39906383 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 39906447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 267
Target Start/End: Original strand, 25579178 - 25579317
Alignment:
Q  129 ccaactcgttaatctct-aggtatttcttaatagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttcta 227  Q
    ||||||| ||||||||| | ||| ||| ||||||||||||||  ||||||| |  |||| | |||||||| | ||||||||||||  ||||| ||| | |    
T  25579178 ccaactcattaatctcttaagtagttcctaatagtttttctaggtcttcatttaactcttgtgatttgactatcctccatctaatctactcttcttacca 25579277  T
Q  228 tagaatcaacaggtcttctctccagatgcccaaatcacct 267  Q
     |||||| ||| |||||||||| | || |||||| |||||    
T  25579278 cagaatctacatgtcttctctctacatccccaaaccacct 25579317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 28858261 - 28858202
Alignment:
Q  105 ttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||  |||| |||||||||||  ||||||||||| | ||||||||||||||    
T  28858261 ttctatcatataaaatatttctatccaacttattaatctctagatctttcttaatagttt 28858202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 45836495 - 45836578
Alignment:
Q  52 agccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||||||||||||||||| |  | | |||||||||||||| ||||||||| | |||||||||| | ||||| |  |||||||||    
T  45836495 agccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactc 45836578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 15311151 - 15311113
Alignment:
Q  90 aacgacgccataattttctatcatatatcatatctctat 128  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  15311151 aacgacaccataattttgtatcatatatcatatctctat 15311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 25826553 - 25826603
Alignment:
Q  110 tcatatatcatatctctatccaactcgttaatctctaggtatttcttaata 160  Q
    |||||||||||||| ||||||||||  ||||| ||||| ||||||||||||    
T  25826553 tcatatatcatatcactatccaacttattaatatctagctatttcttaata 25826603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 30144978 - 30144932
Alignment:
Q  118 catatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||| ||||||||||| ||||||||||| | ||||||||||||||    
T  30144978 catatccctatccaactcattaatctctagatctttcttaatagttt 30144932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 36652261 - 36652199
Alignment:
Q  52 agccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  36652261 agccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 36652199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 42177058 - 42177140
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatag 161  Q
    ||||| |||||||||||| |||||| ||| |||||||| ||||| | |||  ||||| || |||||||| | |||||||||||    
T  42177058 tacatagatcaaacgacgtcataatgttcaatcatataccatatttttatgaaactcatttatctctagatctttcttaatag 42177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 5336039 - 5335962
Alignment:
Q  190 gatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaatcacct 267  Q
    ||||||||  |||||||||||||  ||||||||  ||| |||||| |||| ||||||||| | ||||||||| |||||    
T  5336039 gatttgactcccctccatctaatctactctcctaactacagaatccacagttcttctctctatatgcccaaaccacct 5335962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 40979939 - 40980024
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||| | |||||||||| | ||||| |  |||||||||    
T  40979939 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactc 40980024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 47848825 - 47848716
Alignment:
Q  158 atagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcc 257  Q
    |||||||||||| |||||| |||| |||||| |||  ||| | ||||||||| ||  |||||||||  || |||||  ||| |||||||||| | |||||    
T  47848825 atagtttttctagttcttcctctgcctctagtgatcagactatcctccatctgatctactctccttagtacagaatttacaagtcttctctcgacatgcc 47848726  T
Q  258 caaatcacct 267  Q
    |||| |||||    
T  47848725 caaaccacct 47848716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 4604818 - 4604754
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||| ||||||||||||||| |  | | ||||||||||||||  |||||||||| ||||||||||    
T  4604818 caagtcttatcccactaagtggggttggctacatggatcaaagtacgccataatgttctatcata 4604754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 5336161 - 5336077
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagt 162  Q
    ||||||| |||||||||||||||| | ||| |||| | | ||| ||| | |||||||| ||||||||||| |  |||||||||||    
T  5336161 ctacatgaatcaaacgacgccatagtattcaatcaaaaaccatgtctttctccaactcattaatctctagatcattcttaatagt 5336077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 24777232 - 24777168
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    ||||| |||||||||||||||| || | ||||||| |||||| |||| |||| | ||||||||||    
T  24777232 caagctttatcccactaagtaggatcggctacatgaatcaaatgacgtcatagtgttctatcata 24777168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 28021206 - 28021146
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctat 110  Q
    ||||||||||||||| |||| || ||| |||||||| |||||||||  |||||| ||||||    
T  28021206 caagccttatcccaccaagtggagtaggctacatgggtcaaacgacctcataatgttctat 28021146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 28858196 - 28858068
Alignment:
Q  158 atagtttttctaattcttcatctgtctctagagatttgaccaccctccatct-aattcactctcctttctatagaatcaacaggtcttctctccagatgc 256  Q
    ||||||||||||| ||||  | ||||| ||| |||||||| |  |||||||| |||  ||||| ||| |||||||||| ||||||| ||| || | ||||    
T  28858196 atagtttttctaagtcttactttgtctatagtgatttgacaatgctccatctgaatctactcttcttactatagaatccacaggtcatctttctacatgc 28858097  T
Q  257 ccaaatcaccttacctaagtttccaccat 285  Q
    ||||| ||||| || | |||||| |||||    
T  28858096 ccaaaccacctaacttgagtttctaccat 28858068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 34035165 - 34035261
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||| |||||||||||| |  | | |||||||||||||| ||||||||| | |||||||||  | ||||| |  ||||||||| || |||||||    
T  34035165 caagcctaatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatgaaccatatttggatccaactcattgatctcta 34035261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 37618216 - 37618152
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||| ||||| | ||||||||||    
T  37618216 caagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcata 37618152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 40149024 - 40149088
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| || | | |||||| |||||||   ||||||||| ||||||||||    
T  40149024 caagccttatcccactaagtggattcggctacatagatcaaattgcgccataatgttctatcata 40149088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 28005783 - 28005687
Alignment:
Q  77 actacatggatcaaacgacgccataatt----ttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttcta 169  Q
    ||||||||||||||||||| |||||||     ||||||| ||||||||||| ||||| ||||| ||||||||||| | |||||||||||||||||||    
T  28005783 actacatggatcaaacgacaccataatgaatgttctatcgtatatcatatccctatcaaactcattaatctctagatctttcttaatagtttttcta 28005687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 15588401 - 15588486
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    ||||||||||||||||||||||  | | |||||| ||||||||||||||||||| |||| ||||||| ||| | | ||||||||||    
T  15588401 caagccttatcccactaagtagggtcggctacatagatcaaacgacgccataatgttctgtcatataccatgtttttatccaactc 15588486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 27998683 - 27998598
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||||||||||| |||||| |||||||||||||||| |  ||||| ||||| ||||||| ||| | ||||||| ||||||    
T  27998683 tacatggatcaaacgacgtcataatattctatcatatatcatgttcctatctaactcattaatctgtagatctttcttagtagttt 27998598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 30639310 - 30639395
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||| |||||||||||||||||  | ||||||||||||||||||| |||| ||| || | ||||| ||||||||||| ||||||||    
T  30639310 caagtcttatcccactaagtagggttgactacatggatcaaacgatgccacaatgttttgtcataaatcatatctctgtccaactc 30639395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 18350941 - 18351009
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||||||| |||||| ||||| || ||| ||||| |||||||||||| ||||||||||    
T  18350941 ctacatggatcaaacgacgtcataatgttctaacaaataccatatttctatccaactcattaatctcta 18351009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 28186793 - 28186900
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||| | |||||  | | || ||||||||||||||||||||||| |||       ||||||||||||||||||||| ||||||||||  |    
T  28186793 caagccttatcccattgagtagggtcggctgcatggatcaaacgacgccataatgttc-------tatcatatctctatccaactcattaatctctaaat 28186885  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  28186886 ctttcttaatagttt 28186900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 41808167 - 41808100
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatct 143  Q
    ||||||||||||||||||| | |||||| |||||||||| ||||||| | |||||||||| |||||||    
T  41808167 gactacatggatcaaacgatgtcataatgttctatcatacatcatatttatatccaactcattaatct 41808100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 12576899 - 12576985
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||| || ||| ||| |||||||  ||||||||||| ||||| ||||| |||||| ||||||||||| | ||||||||||||||    
T  12576899 ctacatgtataaaatgacaccataatggtctatcatataccatatttctattcaactcattaatctctagatctttcttaatagttt 12576985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 43475510 - 43475396
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||| ||||| || | | |||| |||||||||  || ||||||  ||||| |||| ||||||| || ||||||||| ||||||||| | |    
T  43475510 caagccttatcccattaagtggagttggctacgtggatcaaattacaccataacgttctaccataaatcatatttcgatccaactcattaatctctggat 43475411  T
Q  150 atttcttaatagttt 164  Q
     ||||||||||||||    
T  43475410 ctttcttaatagttt 43475396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 9235316 - 9235204
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggta 150  Q
    ||||||||||||||||||| |  | | ||||||||||||||  | |||||||| |||||||||| | ||||| || ||||| ||| ||||||||||  |     
T  9235316 aagccttatcccactaagtggg-tcggctacatggatcaaattatgccataatgttctatcataaaccatatttcgatccagctcattaatctctatatc 9235218  T
Q  151 tttcttaatagttt 164  Q
    ||||||||||||||    
T  9235217 tttcttaatagttt 9235204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 20457044 - 20456975
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatca 119  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||||| |||||||||| ||||    
T  20457044 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccataatgttctatcatacatca 20456975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 36123193 - 36123290
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||| ||||||||||||||| | |  || ||||||||||||||| | ||||||| ||||||||||||||||| | |||   ||||| |||||||||||    
T  36123193 caagtcttatcccactaagtgggaccgattacatggatcaaacgccaccataatgttctatcatatatcatacccctacataactcattaatctctag 36123290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 38684724 - 38684637
Alignment:
Q  77 actacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||| ||||||  |||||||||| ||||||||  || ||||| |||||||||||  ||||||||||| | |||||||| |||||    
T  38684724 actacatgaatcaaataacgccataatgttctatcaagtaccatatttctatccaactaattaatctctagatctttcttaaaagttt 38684637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 14749542 - 14749464
Alignment:
Q  86 atcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||| ||||||||| | |||||||| | | ||||| |||||||||||||||||||||||| |  ||||| |||||||    
T  14749542 atcaaatgacgccatagtgttctatcaaaaaccatatttctatccaactcgttaatctctagatccttcttgatagttt 14749464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 2645261 - 2645176
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    ||||||||||||||||||||||    | ||||||||||||||||| || ||||| || ||||| ||| || || ||||||||||||    
T  2645261 caagccttatcccactaagtagggccggctacatggatcaaacgatgctataatgttttatcaaataccacatttctatccaactc 2645176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 2713095 - 2712986
Alignment:
Q  158 atagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcc 257  Q
    ||||||||||||  |||||  ||| |||||| ||||||||   ||||||||| ||  |||||||||  || |||||| |||||||||||||| | |||||    
T  2713095 atagtttttctaggtcttcccctgactctagtgatttgactctcctccatctgatctactctccttcatacagaatccacaggtcttctctctacatgcc 2712996  T
Q  258 caaatcacct 267  Q
    |||| |||||    
T  2712995 caaaccacct 2712986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 38685238 - 38685153
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactc 135  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | |||||||||| | ||||| |  |||||||||    
T  38685238 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactc 38685153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 39128305 - 39128236
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||| |||||||| ||||||||| || |||||||||||| ||| ||||||||||   ||||||||||    
T  39128305 ctacatgtatcaaacggcgccataatgttgtatcatatatcaaatccctatccaactgagtaatctctag 39128236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 2066238 - 2066154
Alignment:
Q  80 acatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||||| ||||||||||||||||||||| || |  |||  | |||||||||| ||||||||||| | ||| ||| ||||||    
T  2066238 acatggatcacacgacgccataattttctatcgtaaactataattttatccaactcattaatctctagatcttttttagtagttt 2066154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 2915507 - 2915571
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  2915507 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 2915571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 4460414 - 4460366
Alignment:
Q  114 atatcatatctctatccaactcgttaatctctaggtatttcttaatagt 162  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||||||||||    
T  4460414 atatcgtatttctatccaactcattaatctctaggtctttcttaatagt 4460366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 29816653 - 29816589
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  29816653 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 29816589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 30213846 - 30213782
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  30213846 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 30213782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 41200360 - 41200428
Alignment:
Q  53 gccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcata 121  Q
    ||||||||||||||||| |  ||| |||||||||||||| || |||||||  ||||||||||| |||||    
T  41200360 gccttatcccactaagtggggtaggctacatggatcaaatgatgccataacgttctatcatatgtcata 41200428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 5303713 - 5303619
Alignment:
Q  55 cttatcccactaagtagaatagactacatggatcaaa-cgacgccataattttctatcatatatc--atatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||| | || | |||||||||| ||| | |||||||||| |||||||||||| |  |||| |||||||||||| |||| |||||    
T  5303713 cttatcccactaagtgggatcggctacatggattaaaacaacgccataatattctatcatataccatatatttctatccaactcattaaactcta 5303619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 14749458 - 14749367
Alignment:
Q  158 atagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctc 249  Q
    ||||||||||||  ||||| |||| || ||| ||||||||  |||||||||| ||  ||||||||| | | |||||| ||||||||||||||    
T  14749458 atagtttttctaggtcttcctctgcctttagtgatttgactcccctccatctgatcgactctccttacaacagaatccacaggtcttctctc 14749367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 27249425 - 27249358
Alignment:
Q  102 attttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttcta 169  Q
    |||||||||||| || |||||||||||| | || ||||||||||||   | |||||||||||||||||    
T  27249425 attttctatcatgtaacatatctctatctaccttgttaatctctagacctctcttaatagtttttcta 27249358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 31636049 - 31636160
Alignment:
Q  156 taatagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatg 255  Q
    ||||||||||||||  |||||  || ||||||| ||||||||  ||| |||||||||  ||||||||| ||| |  ||| || ||||||||||| | |||    
T  31636049 taatagtttttctagatcttcccctatctctagtgatttgactccccaccatctaatctactctccttactacaacatccacgggtcttctctctacatg 31636148  T
Q  256 cccaaatcacct 267  Q
    |||||| |||||    
T  31636149 cccaaaccacct 31636160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 11002432 - 11002494
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    ||||||||||||||||||||||  | ||||||||| ||||||| | |||||| | ||||||||    
T  11002432 caagccttatcccactaagtagggtcgactacatgaatcaaacaatgccatagtgttctatca 11002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 13141824 - 13141710
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||| | ||||||||||  |||||||||| | |||||   || ||| ||||  ||||||||| ||||||||   || | |||||||||||||    
T  13141824 caagccttatcctattaagtagaattaactacatggaacgaacgaattcacaatgttctggcatatatcacatctctatagtacacattaatctctaggt 13141725  T
Q  150 atttcttaatagttt 164  Q
     || |||||||||||    
T  13141724 cttccttaatagttt 13141710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 13561397 - 13561459
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||    
T  13561397 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 13561459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 30588712 - 30588610
Alignment:
Q  56 ttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttct 155  Q
    |||||||||||||| || | | |||||||||||| |  ||| |||||| |||||| ||| | ||||| || ||||||||| || |||||||| | |||||    
T  30588712 ttatcccactaagtggagtcggctacatggatcatatcacgtcataatgttctattataaaccatatttcgatccaactcattcatctctagatctttct 30588613  T
Q  156 taa 158  Q
    |||    
T  30588612 taa 30588610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 39322146 - 39322196
Alignment:
Q  119 atatctctatccaactcgttaatctctaggtatttcttaatagtttttcta 169  Q
    |||| |||||||||||| ||||||| ||| | |||||||||||||||||||    
T  39322146 atatttctatccaactcattaatctttagatctttcttaatagtttttcta 39322196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 3442882 - 3442979
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    |||||||||| ||||||||| |  | | ||||||| |||||||||||||||| | |||||||| | | ||| ||| | ||||| || |||||||||||    
T  3442882 caagccttatgccactaagtggggtcggctacatgaatcaaacgacgccatagtgttctatcaaaaaccatgtctttctccaattcattaatctctag 3442979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 11675801 - 11675704
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatct-ctatccaactcgttaatctcta 146  Q
    |||||||||||| ||||||| |  | | |||||||||| |||| |||||||||| |||||||||| | ||||| |   ||||||||| ||||||||||    
T  11675801 caagccttatccaactaagtggggtcggctacatggattaaactacgccataatgttctatcataaaccatatttaaaatccaactcattaatctcta 11675704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 15252755 - 15252848
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatct 143  Q
    |||||||||||||||||||| |  | | ||||||| || |||| ||  |||||| |||||||||| | | ||| || |||||||||||||||||    
T  15252755 caagccttatcccactaagtggggtcggctacatgaattaaactacatcataatgttctatcataaaccctatttcgatccaactcgttaatct 15252848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 21952508 - 21952399
Alignment:
Q  158 atagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcc 257  Q
    ||||||||||||  |||||  ||  |||||| ||||||||  |||||||||| ||  | ||||||| |||||||||| ||||| |||||||| | ||| |    
T  21952508 atagtttttctaggtcttcccctacctctagtgatttgactcccctccatctgatctattctccttactatagaatccacaggacttctctctacatgtc 21952409  T
Q  258 caaatcacct 267  Q
    |||| |||||    
T  21952408 caaaccacct 21952399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 38684589 - 38684540
Alignment:
Q  200 ccctccatctaattcactctcctttctatagaatcaacaggtcttctctc 249  Q
    |||||||||||||  ||||||||| |||||||||  ||||||||||||||    
T  38684589 ccctccatctaatatactctccttactatagaatacacaggtcttctctc 38684540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 408505 - 408565
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctat 110  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||    
T  408505 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtattctat 408565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 418073 - 418141
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    ||||||||||||||  |||||||||| |||||||||| | || || |  ||||||||| ||||||||||    
T  418073 ctacatggatcaaattacgccataatgttctatcataaaccacatttggatccaactcattaatctcta 418141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 2075484 - 2075548
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||| |||||| ||||||||| | ||||||||||    
T  2075484 caagccttatcccactaagtggggttggctacatgaatcaaatgacgccatagtattctatcata 2075548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 4496655 - 4496591
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| || |||||| | ||||||||||    
T  4496655 caagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcata 4496591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 5860105 - 5860041
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    ||||||||||||||||||||||  | | |||||| |||||||  ||||||||||  |||||||||    
T  5860105 caagccttatcccactaagtagggtcggctacatagatcaaattacgccataatggtctatcata 5860041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 9917526 - 9917582
Alignment:
Q  115 tatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaat 171  Q
    ||||||||||||||||||||| || |||||||  | ||||| |||||||| ||||||    
T  9917526 tatcatatctctatccaactcattgatctctatatctttctaaatagtttctctaat 9917582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 248
Target Start/End: Original strand, 9917579 - 9917671
Alignment:
Q  156 taatagtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctct 248  Q
    ||||||||||||||  || || ||||||||| | |||||||| | ||||||||| ||  |||||| || ||| | |||||||| |||||||||    
T  9917579 taatagtttttctaggtcatcctctgtctcttgtgatttgactatcctccatctgatcgactctctttactacaaaatcaacatgtcttctct 9917671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 10639573 - 10639509
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    ||||||||||||||| |||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  10639573 caagccttatcccacaaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 10639509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 12492395 - 12492459
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||| |||||| ||||||||| | ||||||||||    
T  12492395 caagccttatcccactaagtggggtcggctacatgcatcaaatgacgccatagtgttctatcata 12492459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 14911415 - 14911347
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    |||||||||||||| ||||||||| | |||||||| | ||||||| |  ||||||||| |||| |||||    
T  14911415 ctacatggatcaaatgacgccatagtattctatcaaaaatcatatttggatccaactcattaacctcta 14911347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 22576217 - 22576181
Alignment:
Q  113 tatatcatatctctatccaactcgttaatctctaggt 149  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  22576217 tatatcatatctctatccaactcattaatctttaggt 22576181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 28276509 - 28276445
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    ||||||||||||| |||||| || | | ||||||||||||||  || ||||| ||||||||||||    
T  28276509 caagccttatcccgctaagtggagttggctacatggatcaaattacaccatagttttctatcata 28276445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 28976870 - 28976934
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||| |||||| ||||||||| | ||||||||||    
T  28976870 caagccttatcccactaagtggggtcggctacatgaatcaaatgacgccatagtgttctatcata 28976934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 32442141 - 32442197
Alignment:
Q  55 cttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatc 111  Q
    ||||||||||||||| || | | ||||||||||||||  |||||||||| |||||||    
T  32442141 cttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatc 32442197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 38132607 - 38132543
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | | ||||||||||||  |||||||||| ||||||||||    
T  38132607 caagccttatcccactaagtggggtcggccacatggatcaaattacgccataatgttctatcata 38132543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 42576281 - 42576217
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||||||||||  ||||||| || ||||||||||    
T  42576281 caagccttatcccactaagtcgggtcggctacatggatcaaattacgccattatgttctatcata 42576217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 77 - 171
Target Start/End: Original strand, 1747983 - 1748077
Alignment:
Q  77 actacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttctaat 171  Q
    |||||||||||||||||||| | |||| ||||||||||||  |||| |||||||||||| ||||||||||  | ||||||| |||||| ||||||    
T  1747983 actacatggatcaaacgacgtcgtaatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagtttctctaat 1748077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 285
Target Start/End: Original strand, 6293403 - 6293644
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggt 149  Q
    |||||||||||||||||||| |  | | |||||| || ||||||  ||||||||  ||||||||||| ||||| |||||| ||||| ||||| ||||| |    
T  6293403 caagccttatcccactaagtggggtcggctacattgaccaaacgttgccataatgctctatcatataccatatttctatctaactcattaatatctagat 6293502  T
Q  150 atttcttaatagttt---ttctaattcttc---atctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtct 243  Q
    ||||| |||||||||   || || || |||   ||||  |||||| |||||||| | ||| ||||| ||| |||||||||  || | |||| |||||| |    
T  6293503 atttcctaatagtttctattttagtttttctagatcttcctctagtgatttgactatccttcatctgatttactctccttattacataatctacaggtgt 6293602  T
Q  244 tctctccagatgcccaaatcaccttacctaagtttccaccat 285  Q
    |||||| | ||||||||| ||||| | |  ||||||||||||    
T  6293603 tctctctacatgcccaaaccacctgaacctagtttccaccat 6293644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 33997590 - 33997669
Alignment:
Q  85 gatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||| ||||||||||| ||| ||||| || ||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  33997590 gatcaaatgacgccataatgttcaatcatgtaccatatttctatccaactcattaatctctaggcttttcttaatagttt 33997669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 34544 - 34630
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    ||||||||||||||  |||||||||| |||||||||| | ||||| || ||||||||| ||||||| ||| | ||||||||| ||||    
T  34544 ctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcattaatctttagatctttcttaatggttt 34630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 32945491 - 32945428
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaat 141  Q
    |||||||||||||||||| ||||||| ||||||||||||  |||| |||||| ||||| |||||    
T  32945491 ctacatggatcaaacgacaccataatgttctatcatataaaatatttctatctaactcattaat 32945428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 3964025 - 3963967
Alignment:
Q  85 gatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatct 143  Q
    |||||||| ||||| |||| |||||||||||||| |||||||||| ||||| |||||||    
T  3964025 gatcaaacaacgccgtaatgttctatcatatatcgtatctctatcaaactcattaatct 3963967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 7150350 - 7150432
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaata 160  Q
    ||||||||||||| | |||||||||| || | |||||||| |||||| |||  ||||| ||||||| ||||| ||||||||||    
T  7150350 ctacatggatcaaccaacgccataatgttatgtcatatataatatctatatttaactcattaatctataggtctttcttaata 7150432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 26676373 - 26676435
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaat 141  Q
    ||||||||||||| | ||||||||| |||||| ||||| |||||| ||||||||||| |||||    
T  26676373 tacatggatcaaatgccgccataatgttctataatatagcatatccctatccaactcattaat 26676435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 26677553 - 26677615
Alignment:
Q  79 tacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaat 141  Q
    ||||||||||||| | ||||||||| |||||| ||||| |||||| ||||||||||| |||||    
T  26677553 tacatggatcaaatgccgccataatgttctataatatagcatatccctatccaactcattaat 26677615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 30789085 - 30789147
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||||||| || | |||||||||||||| |||| |||| | ||||||||    
T  30789085 caagccttatcccactaagtaggatcggctacatggatcaaatgacgtcatagtgttctatca 30789147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 3210547 - 3210616
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||||||||||  || ||||||| ||||||||||  |||||| || ||||||||| |||||||||||    
T  3210547 ctacatggatcaaattacaccataatgttctatcataactcatatttccatccaactcattaatctctag 3210616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 34143776 - 34143840
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||| ||||| |  | |||||||||||||||| ||||||||| | ||||||||||    
T  34143776 caagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcata 34143840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 34156392 - 34156456
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||| ||||| |  | |||||||||||||||| ||||||||| | ||||||||||    
T  34156392 caagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcata 34156456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 35199680 - 35199747
Alignment:
Q  96 gccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagttt 164  Q
    |||||||| |||||||||||| ||||| |||||| ||||| ||||||||||| | |||| |||||||||    
T  35199680 gccataatgttctatcatata-catatttctatctaactcattaatctctagatctttcctaatagttt 35199747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 1747775 - 1747842
Alignment:
Q  161 gtttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctat 228  Q
    |||||||||  ||||| |||| ||||||| ||||||| |||||||||||||  |||||||||| ||||    
T  1747775 gtttttctaggtcttcctctgcctctagaaatttgactaccctccatctaagccactctccttactat 1747842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 4245883 - 4245966
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaac 133  Q
    |||||||||||||||||||| |  | | |||| |||||||||||| | |||||| |||||||| ||| ||||| | ||||||||    
T  4245883 caagccttatcccactaagtggggtcggctacttggatcaaacgatgtcataatgttctatcaaataccatatttttatccaac 4245966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 32515390 - 32515449
Alignment:
Q  88 caaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||| ||| |||||| ||| || |||| ||||||||||||||||||| |||||||||||    
T  32515390 caaacaacggcataatattcaataatatttcatatctctatccaactcattaatctctag 32515449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 5096101 - 5096015
Alignment:
Q  54 ccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaa 140  Q
    |||||||||||||||| | || | |||||| |||||||  |||||||||| |||||||||| | ||||| |  ||||||||| ||||    
T  5096101 ccttatcccactaagtgggatcggctacatagatcaaattacgccataatgttctatcataaaccatattttgatccaactcattaa 5096015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 7267424 - 7267514
Alignment:
Q  78 ctacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagtttttct 168  Q
    ||||||||||||||||||  |||||| ||  |||||||||||||| | |||||| ||||   ||| |||| | ||||| ||||||||||||    
T  7267424 ctacatggatcaaacgacatcataatgttgcatcatatatcatatttttatccacctcggctatcgctagatctttctaaatagtttttct 7267514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 9749315 - 9749401
Alignment:
Q  118 catatctctatccaactcgttaatctctaggtatttcttaatagtttttctaattcttcatctgtctctagagatttgaccaccctc 204  Q
    |||||| ||||||| | |||||  |||||| | |||||||||||||||||||  ||||| |||| |||||  |||||||| ||||||    
T  9749315 catatccctatccagcacgttatgctctagatttttcttaatagtttttctagatcttcctctgcctctaatgatttgactaccctc 9749401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 116
Target Start/End: Original strand, 12237861 - 12237895
Alignment:
Q  82 atggatcaaacgacgccataattttctatcatata 116  Q
    |||||||||||||| ||||||||||||||||||||    
T  12237861 atggatcaaacgacaccataattttctatcatata 12237895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 1747712 - 1747749
Alignment:
Q  110 tcatatatcatatctctatccaactcgttaatctctag 147  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  1747712 tcatatatcatatctttatccaactcattaatctctag 1747749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 6906866 - 6906951
Alignment:
Q  78 ctacatggatcaaacgacgccataattttc-tatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagt 162  Q
    ||||||||||||| ||||  |||||| ||| |||| |||| ||| | | |||||||||||||||| ||||| | ||||||||||||    
T  6906866 ctacatggatcaatcgacatcataatgttcctatcttataacatttttatatccaactcgttaatatctagatctttcttaatagt 6906951  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 5897728 - 5897656
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatat 122  Q
    |||||||||||||||||||| | ||   ||||||||||||||  ||| |||||| ||||| |||||| |||||    
T  5897728 caagccttatcccactaagtgggatccgctacatggatcaaattacgtcataatattctaccatataccatat 5897656  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 9707041 - 9706945
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctcta 146  Q
    |||||||||||||||||||| |  | | |||||||||||||| || |||||| | |||||||| | | ||||| |  ||||||||| |||| |||||    
T  9707041 caagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcattaacctcta 9706945  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 12890846 - 12890782
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | ||||||||||||||  |||||||| | ||||||||||    
T  12890846 caagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcata 12890782  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 262
Target Start/End: Original strand, 21870200 - 21870300
Alignment:
Q  162 tttttctaattcttcatctgtctctagagatttgaccaccctccatctaattcactctcctttctatagaatcaacaggtcttctctccagatgcccaaa 261  Q
    ||||||||  ||||| |||| || ||| |||||||| || |||||||| ||  ||||||||| ||| | |||| |||||||||||||| | ||||| |||    
T  21870200 tttttctaggtcttcctctgcctttagtgatttgactactctccatcttatctactctccttactacaaaatctacaggtcttctctctaaatgcctaaa 21870299  T
Q  262 t 262  Q
    |    
T  21870300 t 21870300  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 28085647 - 28085583
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||| ||||| | ||||||||||    
T  28085647 caagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcata 28085583  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 31819102 - 31819038
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    ||||| |||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  31819102 caagcattatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 31819038  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 32756192 - 32756128
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||| |||| |||||||||| | || | |||||||||||||| ||||||||| | ||||||||||    
T  32756192 caagtcttaccccactaagtgggatcggctacatggatcaaatgacgccatagtgttctatcata 32756128  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 34934841 - 34934905
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| || |||||| | ||||||||||    
T  34934841 caagccttatcccactaagtggggtcggctacatggatcaaatgaggccatagtgttctatcata 34934905  T

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Target: scaffold0373 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 2338 - 2424
Alignment:
Q  76 gactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgttaatctctaggtatttcttaatagt 162  Q
    ||||||||||||| ||| | |||||||| |||||| ||||| ||||| |||||| ||||| ||||||||||| | ||||||||||||    
T  2338 gactacatggatccaacaatgccataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagt 2424  T

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Target: scaffold0392 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 6783 - 6864
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatcca 131  Q
    |||||||||||||||||||| |  | | ||||||||||||||  | |||||||| || ||||||||| ||||| ||||||||    
T  6783 caagccttatcccactaagtggggttggctacatggatcaaattatgccataatgttatatcatataccatatttctatcca 6864  T

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Target: scaffold1318 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 602 - 538
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  602 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 538  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 28900 - 28964
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcata 114  Q
    |||||||||||||||||||| |  | | |||||||||||||| ||||||||| | ||||||||||    
T  28900 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata 28964  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 16849 - 16787
Alignment:
Q  50 caagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatca 112  Q
    |||||||||||||||||||| || | | |||||| ||||||| ||||||||| | ||||||||    
T  16849 caagccttatcccactaagtggagtcggctacatagatcaaatgacgccatagtgttctatca 16787  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 58238 - 58311
Alignment:
Q  51 aagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatct 124  Q
    ||||||||||||||||||| |  | | ||||||||||||||  ||| |||||| |||||||||| | |||||||    
T  58238 aagccttatcccactaagttgggtcggctacatggatcaaattacgacataatgttctatcataaaccatatct 58311  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 2943 - 2987
Alignment:
Q  97 ccataattttctatcatatatcatatctctatccaactcgttaat 141  Q
    ||||||||||||||| |||||||||| |||||| ||||| |||||    
T  2943 ccataattttctatcgtatatcatatttctatcaaactcattaat 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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