View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0407_low_10 (Length: 223)

Name: NF0407_low_10
Description: NF0407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0407_low_10
NF0407_low_10
[»] chr7 (16 HSPs)
chr7 (14-134)||(279958-280077)
chr7 (86-133)||(48771962-48772009)
chr7 (85-135)||(26703148-26703198)
chr7 (82-130)||(37233580-37233628)
chr7 (86-133)||(24513821-24513868)
chr7 (88-133)||(5934147-5934192)
chr7 (86-133)||(8108605-8108652)
chr7 (86-133)||(15905679-15905725)
chr7 (86-133)||(20335836-20335883)
chr7 (86-133)||(25590635-25590682)
chr7 (86-133)||(26459415-26459462)
chr7 (86-133)||(45709713-45709760)
chr7 (86-133)||(49050496-49050543)
chr7 (87-133)||(17041017-17041063)
chr7 (82-123)||(34898478-34898519)
chr7 (88-133)||(37473640-37473685)
[»] scaffold0299 (1 HSPs)
scaffold0299 (86-133)||(11552-11599)
[»] chr4 (11 HSPs)
chr4 (89-133)||(39509097-39509141)
chr4 (86-133)||(38869792-38869839)
chr4 (86-133)||(23377980-23378027)
chr4 (86-133)||(24124060-24124107)
chr4 (86-133)||(30938224-30938271)
chr4 (86-133)||(37109356-37109403)
chr4 (82-133)||(43623449-43623500)
chr4 (88-134)||(47386795-47386841)
chr4 (92-133)||(28635726-28635767)
chr4 (86-134)||(13901766-13901814)
chr4 (86-134)||(51948504-51948552)
[»] chr3 (26 HSPs)
chr3 (89-133)||(44743860-44743904)
chr3 (86-133)||(2667886-2667933)
chr3 (86-133)||(10499114-10499161)
chr3 (86-133)||(51903883-51903930)
chr3 (87-133)||(10445144-10445190)
chr3 (95-133)||(52769988-52770026)
chr3 (87-132)||(31520611-31520656)
chr3 (86-130)||(4844519-4844563)
chr3 (86-130)||(4870215-4870259)
chr3 (86-133)||(2597225-2597272)
chr3 (86-133)||(9557344-9557391)
chr3 (82-133)||(28703409-28703460)
chr3 (86-133)||(29563924-29563971)
chr3 (90-133)||(30311334-30311377)
chr3 (86-133)||(36720405-36720452)
chr3 (86-133)||(47279409-47279456)
chr3 (86-133)||(47454622-47454669)
chr3 (86-132)||(27259185-27259231)
chr3 (86-124)||(31788984-31789022)
chr3 (86-132)||(46518652-46518698)
chr3 (85-126)||(11090177-11090218)
chr3 (92-133)||(11612329-11612370)
chr3 (88-129)||(31608533-31608574)
chr3 (86-118)||(4222165-4222197)
chr3 (86-134)||(13808889-13808937)
chr3 (86-126)||(28531070-28531110)
[»] scaffold0258 (1 HSPs)
scaffold0258 (86-133)||(15328-15375)
[»] scaffold0009 (1 HSPs)
scaffold0009 (86-133)||(19852-19899)
[»] chr8 (12 HSPs)
chr8 (86-133)||(968386-968433)
chr8 (82-133)||(6569776-6569827)
chr8 (86-133)||(16852364-16852411)
chr8 (83-133)||(34628663-34628713)
chr8 (86-134)||(10287499-10287547)
chr8 (86-133)||(18540322-18540369)
chr8 (86-133)||(29431035-29431082)
chr8 (86-133)||(29858054-29858101)
chr8 (82-133)||(31087263-31087314)
chr8 (86-130)||(2203516-2203560)
chr8 (86-134)||(6536544-6536592)
chr8 (86-134)||(23361653-23361701)
[»] chr6 (5 HSPs)
chr6 (86-133)||(33549128-33549175)
chr6 (83-129)||(16405106-16405152)
chr6 (86-132)||(31622997-31623043)
chr6 (86-133)||(11423590-11423637)
chr6 (86-133)||(30127424-30127471)
[»] chr5 (10 HSPs)
chr5 (86-133)||(30109313-30109360)
chr5 (93-134)||(12883871-12883912)
chr5 (86-129)||(14495814-14495857)
chr5 (86-133)||(16773831-16773878)
chr5 (86-129)||(22020871-22020914)
chr5 (86-133)||(29075805-29075852)
chr5 (86-132)||(4793094-4793140)
chr5 (89-133)||(84851-84895)
chr5 (86-134)||(30883202-30883250)
chr5 (86-134)||(43241686-43241734)
[»] chr2 (10 HSPs)
chr2 (86-133)||(21213793-21213840)
chr2 (86-133)||(23052528-23052575)
chr2 (82-133)||(31573646-31573697)
chr2 (86-133)||(39715016-39715063)
chr2 (86-133)||(42327400-42327447)
chr2 (82-132)||(11062380-11062430)
chr2 (82-127)||(7667480-7667525)
chr2 (85-133)||(4262307-4262355)
chr2 (93-133)||(25637182-25637222)
chr2 (93-133)||(33582004-33582044)
[»] chr1 (14 HSPs)
chr1 (90-133)||(9117147-9117190)
chr1 (82-133)||(12587290-12587341)
chr1 (86-133)||(15786325-15786372)
chr1 (86-133)||(31383803-31383850)
chr1 (86-133)||(52336779-52336826)
chr1 (86-133)||(8177187-8177234)
chr1 (86-133)||(33700778-33700825)
chr1 (86-127)||(25494080-25494121)
chr1 (86-134)||(9165199-9165247)
chr1 (97-133)||(9224810-9224846)
chr1 (86-126)||(26232398-26232438)
chr1 (86-134)||(30689036-30689084)
chr1 (86-134)||(40257423-40257471)
chr1 (86-118)||(44046168-44046200)
[»] scaffold1367 (1 HSPs)
scaffold1367 (86-133)||(845-892)
[»] scaffold0471 (1 HSPs)
scaffold0471 (86-133)||(8647-8694)
[»] scaffold0194 (1 HSPs)
scaffold0194 (86-133)||(13051-13098)
[»] scaffold0013 (1 HSPs)
scaffold0013 (98-136)||(91161-91199)
[»] scaffold0118 (1 HSPs)
scaffold0118 (86-134)||(41637-41685)
[»] scaffold0002 (1 HSPs)
scaffold0002 (86-134)||(94975-95023)


Alignment Details
Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 280077 - 279958
Alignment:
Q  14 accaactagccaactaaacgatgcatcaagggtgagcattcaagtgttgataataacattcatgtgacgtgatattggcttgggatctgggagtgtgctt 113  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||     
T  280077 accaactagccaactaaacgatgcattaagggtgagcattcaagtgttgataataacattcatgtgacgtgatattggcttgggat-tgggagtgtactc 279979  T
Q  114 ctccttgaggtctcaggttca 134  Q
    |||||| ||||||||||||||    
T  279978 ctccttaaggtctcaggttca 279958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 48771962 - 48772009
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48771962 tattggcttgggatctgggagtgtgctcctccttgaggtctcaggttc 48772009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 26703148 - 26703198
Alignment:
Q  85 atattggcttgggatctgggagtgtgcttctccttgaggtctcaggttcat 135  Q
    |||||||||||||||||||||||||||| || || ||||||||||||||||    
T  26703148 atattggcttgggatctgggagtgtgctccttctcgaggtctcaggttcat 26703198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 37233628 - 37233580
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgaggtctcagg 130  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  37233628 gtgatattggcttgggatgtgggagtgtgctcctccttaaggtctcagg 37233580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 24513821 - 24513868
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  24513821 tattggcttgagatttgggagtgtacttctccttgaggtctcaggttc 24513868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 5934147 - 5934192
Alignment:
Q  88 ttggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  5934147 ttggcttgggatctgggagtgtgctcctccttgaggtttcatgttc 5934192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 8108605 - 8108652
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||| |||||||| |||||||| ||| ||||||||||||||||||||    
T  8108605 tattgacttgggatatgggagtgcgctcctccttgaggtctcaggttc 8108652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 15905725 - 15905679
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  15905725 tattggcttgggacctgggagtgtgctcctcctt-aggtctcaggttc 15905679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 20335883 - 20335836
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||  |||||||||||| ||||| ||||||||||||||    
T  20335883 tattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttc 20335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 25590635 - 25590682
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||| |||||||||||||||| ||||| |||||||| |||||    
T  25590635 tattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttc 25590682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 26459462 - 26459415
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| |||||  |||||||||||||    
T  26459462 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttc 26459415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 45709760 - 45709713
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||| |||||||||||| ||||||||| ||||| ||||||||||||||    
T  45709760 tattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttc 45709713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 49050543 - 49050496
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||| |||||||||||| |||||| || ||||||||||||||||||||    
T  49050543 tattagcttgggatctgcgagtgtactcctccttgaggtctcaggttc 49050496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 17041063 - 17041017
Alignment:
Q  87 attggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||    
T  17041063 attggcttgggatctggaagtgtgctcctcctcaaggtctcaggttc 17041017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 34898519 - 34898478
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgagg 123  Q
    |||||| | |||||||||||||||||||||| ||||||||||    
T  34898519 gtgataatagcttgggatctgggagtgtgctcctccttgagg 34898478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 37473640 - 37473685
Alignment:
Q  88 ttggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||| ||||||||| ||||| |||| ||||||||||||||||||||    
T  37473640 ttggtttgggatctaggagtttgctcctccttgaggtctcaggttc 37473685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 11552 - 11599
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  11552 tattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttc 11599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 39509097 - 39509141
Alignment:
Q  89 tggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  39509097 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttc 39509141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 38869792 - 38869839
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||    
T  38869792 tattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttc 38869839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 23377980 - 23378027
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| |||||  |||||||||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttc 23378027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 24124107 - 24124060
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||| |||||||||| | ||||||||||||| ||||||    
T  24124107 tattggcttgggatttgggagtgtggtcctccttgaggtctgaggttc 24124060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 30938271 - 30938224
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  30938271 tattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttc 30938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 37109403 - 37109356
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| |||||  |||||||||||||    
T  37109403 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttc 37109356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 43623500 - 43623449
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||| |||| |||| ||||||||||| |||||||| |||||||||||    
T  43623500 gtgatattgacttgagatcagggagtgtgctcctccttgaagtctcaggttc 43623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 47386841 - 47386795
Alignment:
Q  88 ttggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    |||||| |||||||| ||||| |||||| ||||||||||||||||||    
T  47386841 ttggctagggatctgagagtgcgcttcttcttgaggtctcaggttca 47386795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 28635726 - 28635767
Alignment:
Q  92 cttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||    
T  28635726 cttgggatctgggagtgtgctcctcctggaggtcttaggttc 28635767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 13901766 - 13901814
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    |||||||||| || ||||||||||| | ||||||||||||||| |||||    
T  13901766 tattggcttgagacctgggagtgtgttcctccttgaggtctcaagttca 13901814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 51948504 - 51948552
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||| |||||||||| |||||||||  ||||| |||||||||||||||    
T  51948504 tattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttca 51948552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 44743904 - 44743860
Alignment:
Q  89 tggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttc 44743860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 2667886 - 2667933
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||    
T  2667886 tattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttc 2667933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 10499161 - 10499114
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||    
T  10499161 tattggcttgggatctgggagtctgctcttccttgaggtctcaggttc 10499114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 51903930 - 51903883
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  51903930 tattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttc 51903883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 10445190 - 10445144
Alignment:
Q  87 attggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  10445190 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttc 10445144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 52770026 - 52769988
Alignment:
Q  95 gggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttc 52769988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 31520656 - 31520611
Alignment:
Q  87 attggcttgggatctgggagtgtgcttctccttgaggtctcaggtt 132  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||||    
T  31520656 attggcttgggatctgggagtgtgctcctcctcgaggtcttaggtt 31520611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 4844563 - 4844519
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcagg 130  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||    
T  4844563 tattgacttgggatctgggagtgtgctcctcctcgaggtctcagg 4844519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 4870259 - 4870215
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcagg 130  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||    
T  4870259 tattgacttgggatctgggagtgtgctcctcctcgaggtctcagg 4870215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 2597272 - 2597225
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||| |||| | |||||||||| ||||||||||||||||||||    
T  2597272 tattggcttcggatttaggagtgtgctcctccttgaggtctcaggttc 2597225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 9557344 - 9557391
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||| ||||||||| ||||| ||| ||||||||||    
T  9557344 tattggcttgggatctgagagtgtgctcctcctcgagatctcaggttc 9557391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 28703460 - 28703409
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||| |||||||||||||||||||||| ||| |  |||||||||||||    
T  28703460 gtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttc 28703409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 29563924 - 29563971
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||| ||||||| |||||||||||||| || |||||||||||    
T  29563924 tattggcttgagatctggaagtgtgcttctcctcgaagtctcaggttc 29563971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 30311334 - 30311377
Alignment:
Q  90 ggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||| |||||  |||||||||||||    
T  30311334 ggcttgggatctgggagtgtgctcctcctcaaggtctcaggttc 30311377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 36720405 - 36720452
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||| |||||||||||| ||||| ||||| ||||||||    
T  36720405 tattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttc 36720452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 47279456 - 47279409
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||| |||||||||||||||||||||| |||||| |||||||| ||||    
T  47279456 tatttgcttgggatctgggagtgtgctcctccttaaggtctcatgttc 47279409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 47454669 - 47454622
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||| ||||| |||||||||| ||||| ||||||||||||||    
T  47454669 tattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttc 47454622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 27259185 - 27259231
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggtt 132  Q
    ||||||||||||| ||||||||||||| ||||| ||||| |||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtt 27259231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 31789022 - 31788984
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggt 124  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  31789022 tattggcttgggatctgggagtgtgctcctcctcgaggt 31788984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 46518652 - 46518698
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggtt 132  Q
    ||||||||||||||||||||||||||| |||||  |||| |||||||    
T  46518652 tattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtt 46518698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 11090218 - 11090177
Alignment:
Q  85 atattggcttgggatctgggagtgtgcttctccttgaggtct 126  Q
    ||||||||||||||||||||| |||||| ||||| |||||||    
T  11090218 atattggcttgggatctgggaatgtgctcctcctcgaggtct 11090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 11612329 - 11612370
Alignment:
Q  92 cttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||| ||||||||||||| |||||| |||||||||||||    
T  11612329 cttgggagctgggagtgtgctcctccttaaggtctcaggttc 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 31608574 - 31608533
Alignment:
Q  88 ttggcttgggatctgggagtgtgcttctccttgaggtctcag 129  Q
    |||||||| |||||||||||||||| ||||| ||||||||||    
T  31608574 ttggcttgagatctgggagtgtgctcctcctcgaggtctcag 31608533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 4222165 - 4222197
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctcct 118  Q
    ||||||||||||||||||||||||||| |||||    
T  4222165 tattggcttgggatctgggagtgtgctcctcct 4222197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 13808937 - 13808889
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||| |||||||||||| |||||||| |||||  ||||||||||||||    
T  13808937 tattgacttgggatctggcagtgtgctcctcctctaggtctcaggttca 13808889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 28531110 - 28531070
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtct 126  Q
    |||||||||||||||||||||| |||| ||||| |||||||    
T  28531110 tattggcttgggatctgggagtatgctcctcctcgaggtct 28531070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 15375 - 15328
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  15375 tattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttc 15328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 19899 - 19852
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  19899 tattggcttgggatctgggagtctgctcctccttgaggtctcaagttc 19852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 968386 - 968433
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  968386 tattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttc 968433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 6569827 - 6569776
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||| ||||    
T  6569827 gtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttc 6569776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 16852364 - 16852411
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  16852364 tattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttc 16852411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 34628663 - 34628713
Alignment:
Q  83 tgatattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||||||||||| |||||||  | |||||||||||    
T  34628663 tgatattggcttgggatctgggagtgtgtttctcctcaaagtctcaggttc 34628713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 10287499 - 10287547
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||||||||  |||||| |||||||||||||| |||||||||||||||    
T  10287499 tattggcttgaaatctggaagtgtgcttctcctcgaggtctcaggttca 10287547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 18540322 - 18540369
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| |||||||||| ||||||||  |||||||||||||    
T  18540322 tattggcttgggacctgggagtgtacttctcctcaaggtctcaggttc 18540369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 29431035 - 29431082
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||  |||||||||||| |||||||||| |||||||||    
T  29431035 tattggcttgggacttgggagtgtgctcctccttgaggcctcaggttc 29431082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 29858101 - 29858054
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| | ||||||||||| ||||| ||||||||||||||    
T  29858101 tattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttc 29858054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 31087314 - 31087263
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||||||||| | |  ||||| ||||||||||||||    
T  31087314 gtgatattggcttgggatctgggagtatccccctcctcgaggtctcaggttc 31087263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 2203516 - 2203560
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcagg 130  Q
    ||||||||||||| ||||||||||||| |||||  ||||||||||    
T  2203516 tattggcttgggacctgggagtgtgctcctcctcaaggtctcagg 2203560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 6536544 - 6536592
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||||||||||| || |||||||||| |||||  ||||||||||||||    
T  6536544 tattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttca 6536592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 23361701 - 23361653
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||| |||||||| |||||||||||| |||||  ||||||||||||||    
T  23361701 tattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttca 23361653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 33549128 - 33549175
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  33549128 tattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttc 33549175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 16405106 - 16405152
Alignment:
Q  83 tgatattggcttgggatctgggagtgtgcttctccttgaggtctcag 129  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  16405106 tgatattggtttgggacctgggagtgtgcttctcctcgaggtctcag 16405152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 31623043 - 31622997
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggtt 132  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  31623043 tattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 31622997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 11423590 - 11423637
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||| |||||||| ||||||| |||||||||| ||||||||||||||    
T  11423590 tattgacttgggatttgggagtatgcttctcctcgaggtctcaggttc 11423637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 30127424 - 30127471
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||| |||||||||||||| ||| | ||||||||||||||    
T  30127424 tattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttc 30127471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 30109360 - 30109313
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||| || ||||||||||||| ||||||||||||||||||||    
T  30109360 tattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttc 30109313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 12883871 - 12883912
Alignment:
Q  93 ttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  12883871 ttgggatctgggagtgtgctcctccttgaggtctcatgttca 12883912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 14495857 - 14495814
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcag 129  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||    
T  14495857 tattgacttgggatctgggagtgtgctcctcctcgaggtctcag 14495814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 16773831 - 16773878
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||| ||||||| ||||||||||||| ||||| ||||||||||||||    
T  16773831 tattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttc 16773878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 22020914 - 22020871
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcag 129  Q
    |||| |||||||||||||||||||||| |||||||| |||||||    
T  22020914 tattagcttgggatctgggagtgtgctcctccttgaagtctcag 22020871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 29075805 - 29075852
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||| ||||    
T  29075805 tattggcttgggatctgggagtgtgctcctcctcgagatctcatgttc 29075852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 4793140 - 4793094
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggtt 132  Q
    |||||| |||||| ||||||||||||| ||||| |||||||||||||    
T  4793140 tattggtttgggacctgggagtgtgctcctcctcgaggtctcaggtt 4793094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 84851 - 84895
Alignment:
Q  89 tggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||||||| |||||  |||||||| ||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtctcaagttc 84895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 30883250 - 30883202
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||||||||||| ||||||||||||| |||||  |||||||| |||||    
T  30883250 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttca 30883202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 43241734 - 43241686
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||| |||||||||| |||||||||   ||||||||||||||||||||    
T  43241734 tattgacttgggatcttggagtgtgcccttccttgaggtctcaggttca 43241686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 21213793 - 21213840
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  21213793 tattggcttgggacctgggagtgtgttcctccttgaggtctcaggttc 21213840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 23052575 - 23052528
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||    
T  23052575 tattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttc 23052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 31573697 - 31573646
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||| ||| |||||| ||||||||| |||||||| |||||||||||    
T  31573697 gtgatattggtttgagatctgagagtgtgctcctccttgatgtctcaggttc 31573646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 39715016 - 39715063
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||| ||||||| ||||||||||||| ||||| ||||||||||||||    
T  39715016 tattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttc 39715063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 42327447 - 42327400
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| |||||  |||||||||||||    
T  42327447 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttc 42327400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 11062380 - 11062430
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgaggtctcaggtt 132  Q
    ||||||||||||||| |  ||||||||||||||||||  ||||||||||||    
T  11062380 gtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtt 11062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 7667525 - 7667480
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgaggtctc 127  Q
    |||||||||||||||||  |||||||||||| ||||||||| ||||    
T  7667525 gtgatattggcttgggacttgggagtgtgctcctccttgagatctc 7667480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 4262355 - 4262307
Alignment:
Q  85 atattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||| |||| |||||||| |||||  |||||||||||||    
T  4262355 atattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttc 4262307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 25637182 - 25637222
Alignment:
Q  93 ttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||| || || ||||||||||||||    
T  25637182 ttgggatctgggagtgtgctccttctcgaggtctcaggttc 25637222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 33582004 - 33582044
Alignment:
Q  93 ttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||| ||| ||||||||| ||||||||||||||||||||    
T  33582004 ttgggacctgagagtgtgctcctccttgaggtctcaggttc 33582044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 9117147 - 9117190
Alignment:
Q  90 ggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||| |||||||| ||||||||||||||||||||    
T  9117147 ggcttgggatctggaagtgtgctcctccttgaggtctcaggttc 9117190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 12587290 - 12587341
Alignment:
Q  82 gtgatattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||    
T  12587290 gtgatattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttc 12587341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 15786372 - 15786325
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||    
T  15786372 tattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttc 15786325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 31383850 - 31383803
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  31383850 tattggcttgggacctgggagtgtgctcctccttggggtctcaggttc 31383803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 52336826 - 52336779
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||    
T  52336826 tattggcttgggatctgggagtgtgctcctccttaagatctcaggttc 52336779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 8177234 - 8177187
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||||||||||||||||||| |||||  |||| ||||||||    
T  8177234 tattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttc 8177187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 33700825 - 33700778
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    ||||||||||| ||||||||||||||| |||||  |||||||||||||    
T  33700825 tattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttc 33700778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 25494121 - 25494080
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctc 127  Q
    |||||||||||||||| ||||| |||||||||| ||||||||    
T  25494121 tattggcttgggatctaggagtttgcttctcctcgaggtctc 25494080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 9165247 - 9165199
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||||||||||| ||||||||||||| |||||  | ||||||||||||    
T  9165247 tattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttca 9165199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 9224810 - 9224846
Alignment:
Q  97 gatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||| |||| |||||||||||||||||||||||||    
T  9224810 gatctgagagtatgcttctccttgaggtctcaggttc 9224846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 26232438 - 26232398
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtct 126  Q
    |||||||||| |||||||||||||||| || ||||||||||    
T  26232438 tattggcttgagatctgggagtgtgctcctgcttgaggtct 26232398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 30689036 - 30689084
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||||||| ||| |||||||| |||| ||||||||||||||| |||||    
T  30689036 tattggcttaggacctgggagtttgctcctccttgaggtctcatgttca 30689084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 40257423 - 40257471
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    |||||||||| || ||||||||||||| ||||| ||||||||| |||||    
T  40257423 tattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttca 40257471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 44046200 - 44046168
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctcct 118  Q
    ||||||||||||||||||||||||||| |||||    
T  44046200 tattggcttgggatctgggagtgtgctcctcct 44046168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 892 - 845
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||||||||| |||||| ||||| || |||||||||||    
T  892 tattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttc 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 8694 - 8647
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||||||| |||||||||| | ||||||||||||| ||||||    
T  8694 tattggcttgggatttgggagtgtggtcctccttgaggtctgaggttc 8647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 13098 - 13051
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttc 133  Q
    |||||||||| |||||||||||||||| |||||  |||||||||||||    
T  13098 tattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttc 13051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 91161 - 91199
Alignment:
Q  98 atctgggagtgtgcttctccttgaggtctcaggttcatc 136  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  91161 atctggaagtgtgcttctccttaaggtctcaggttcatc 91199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 41685 - 41637
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    |||||||||| |||||| |||| |||| ||||| |||||||||||||||    
T  41685 tattggcttgagatctgagagtatgctcctcctcgaggtctcaggttca 41637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 95023 - 94975
Alignment:
Q  86 tattggcttgggatctgggagtgtgcttctccttgaggtctcaggttca 134  Q
    ||||||||||| | ||||||||||||| |||||  ||||||||||||||    
T  95023 tattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttca 94975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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