View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0408_low_9 (Length: 257)
Name: NF0408_low_9
Description: NF0408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0408_low_9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 17625447 - 17625372
Alignment:
| Q |
182 |
ttttcttatttcagtgaccaaaatttgaagtaatttatttttcttataatagttactagcgtatttttgttgattt |
257 |
Q |
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| T |
17625447 |
ttttcttatttcagtgaccaaaatttgaagtaatttatttttcttatattagttactagcgtatttttgttgattt |
17625372 |
T |
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