View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0409_high_2 (Length: 761)
Name: NF0409_high_2
Description: NF0409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0409_high_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 622; Significance: 0; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 622; E-Value: 0
Query Start/End: Original strand, 35 - 719
Target Start/End: Complemental strand, 18047603 - 18046916
Alignment:
| Q |
35 |
tgccgcaaaacccatctataactagtttttgaagcgaatggtg---tggctgcaggccttgtaaaatgatctcatcttcctccatgatctcattctggtc |
131 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18047603 |
tgccgcaaaacccatctataactagttttcgaagtgagtggtggtgtggctgcaggccttgtaaaatgatctcatcttcctccatgatctcattctggtc |
18047504 |
T |
|
| Q |
132 |
gacatgattccatcgcaattccaattgttgaaggtgttgcttctcaagaagtacttttgcagattcaatctttgcagcattatttcgcaggaaattcaac |
231 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
18047503 |
gacatgattccatcgtaattccaaatgttgaaggtgtcgcttctcaacaagtacttttgcagattcaatctctgcagcattatttcgcaggaaattcaac |
18047404 |
T |
|
| Q |
232 |
ccttttaattctaatctccctctcaggttgtttagcttagccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaagat |
331 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18047403 |
ccttttaattctaatctccctctcaggttgtttagcctagccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaagat |
18047304 |
T |
|
| Q |
332 |
cagtcaactgtcctagcccccgtggcatacatgtcaatctctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatatttc |
431 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18047303 |
cagtcaactgtcctagcccccgtggcatacatctcaatctctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatatttc |
18047204 |
T |
|
| Q |
432 |
aagcttagaacaatcagaaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttataagtacattgttccgtgatagatcaata |
531 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18047203 |
aagcttagaacaatcagcaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttttaagtacattgttccgtgatagatcaata |
18047104 |
T |
|
| Q |
532 |
tatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaaggaaa |
631 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18047103 |
tatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaaggaaa |
18047004 |
T |
|
| Q |
632 |
aaacatctgactgaagcaaacgattgcttgcattcatttctggactgaccacgtgaaatgtccttaacttgtaggaagatgatgatgt |
719 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18047003 |
aaacatctgactgaagcaaacgattgcttgcattcatttgtggactgaccacgtgaaatgtccttaacttgtaggaagatgatgatgt |
18046916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 535; E-Value: 0
Query Start/End: Original strand, 129 - 719
Target Start/End: Original strand, 18033647 - 18034237
Alignment:
| Q |
129 |
gtcgacatgattccatcgcaattccaattgttgaaggtgttgcttctcaagaagtacttttgcagattcaatctttgcagcattatttcgcaggaaattc |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18033647 |
gtcgacatgattccatcgcaattccaattgttgaaggtgtcgcttctcaagaagtacttttgcagattcaatcttttcagcattatttcgcaggaaattc |
18033746 |
T |
|
| Q |
229 |
aacccttttaattctaatctccctctcaggttgtttagcttagccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaa |
328 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18033747 |
aacccttttaattctaatctccctctcaggttgtttagctcacccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaa |
18033846 |
T |
|
| Q |
329 |
gatcagtcaactgtcctagcccccgtggcatacatgtcaatctctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatat |
428 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18033847 |
gatcagtcaactgtcctagcccacgtggcatacatgtcaaactctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatat |
18033946 |
T |
|
| Q |
429 |
ttcaagcttagaacaatcagaaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttataagtacattgttccgtgatagatca |
528 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
18033947 |
ttcaagcttagaacaatcagaaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttttaagtacattgttccgtgatagatca |
18034046 |
T |
|
| Q |
529 |
atatatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaagg |
628 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18034047 |
atatatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaagg |
18034146 |
T |
|
| Q |
629 |
aaaaaacatctgactgaagcaaacgattgcttgcattcatttctggactgaccacgtgaaatgtccttaacttgtaggaagatgatgatgt |
719 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
18034147 |
aaaaatcatctgactgaagcaaacgattgcttgcatttgattgtggaccgaccacatgaaatgtccttaacttgtaggaagatgatgatgt |
18034237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 18033520 - 18033599
Alignment:
| Q |
35 |
tgccgcaaaacccatctataactagtttttgaagcgaatggt---gtggctgcaggccttgtaaaatgatctcatcttcc |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||| || |||| |||||||||||||| | |||||||||||||||||| |
|
|
| T |
18033520 |
tgccacaaaacccatctataactagttttcgaagtgagtggtggtgtggctgcaggcctagaaaaatgatctcatcttcc |
18033599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 622; Significance: 0; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 622; E-Value: 0
Query Start/End: Original strand, 35 - 719
Target Start/End: Original strand, 4397723 - 4398410
Alignment:
| Q |
35 |
tgccgcaaaacccatctataactagtttttgaagcgaatggt---gtggctgcaggccttgtaaaatgatctcatcttcctccatgatctcattctggtc |
131 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4397723 |
tgccgcaaaacccatctataactagttttcgaagtgagtggtggtgtggctgcaggccttgtaaaatgatctcatcttcctccatgatctcattctggtc |
4397822 |
T |
|
| Q |
132 |
gacatgattccatcgcaattccaattgttgaaggtgttgcttctcaagaagtacttttgcagattcaatctttgcagcattatttcgcaggaaattcaac |
231 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4397823 |
gacatgattccatcgtaattccaaatgttgaaggtgtcgcttctcaacaagtacttttgcagattcaatctctgcagcattatttcgcaggaaattcaac |
4397922 |
T |
|
| Q |
232 |
ccttttaattctaatctccctctcaggttgtttagcttagccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaagat |
331 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4397923 |
ccttttaattctaatctccctctcaggttgtttagcctagccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaagat |
4398022 |
T |
|
| Q |
332 |
cagtcaactgtcctagcccccgtggcatacatgtcaatctctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatatttc |
431 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4398023 |
cagtcaactgtcctagcccccgtggcatacatctcaatctctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatatttc |
4398122 |
T |
|
| Q |
432 |
aagcttagaacaatcagaaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttataagtacattgttccgtgatagatcaata |
531 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4398123 |
aagcttagaacaatcagcaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttttaagtacattgttccgtgatagatcaata |
4398222 |
T |
|
| Q |
532 |
tatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaaggaaa |
631 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4398223 |
tatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaaggaaa |
4398322 |
T |
|
| Q |
632 |
aaacatctgactgaagcaaacgattgcttgcattcatttctggactgaccacgtgaaatgtccttaacttgtaggaagatgatgatgt |
719 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4398323 |
aaacatctgactgaagcaaacgattgcttgcattcatttgtggactgaccacgtgaaatgtccttaacttgtaggaagatgatgatgt |
4398410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 544; E-Value: 0
Query Start/End: Original strand, 129 - 716
Target Start/End: Complemental strand, 4498822 - 4498235
Alignment:
| Q |
129 |
gtcgacatgattccatcgcaattccaattgttgaaggtgttgcttctcaagaagtacttttgcagattcaatctttgcagcattatttcgcaggaaattc |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4498822 |
gtcgacatgattccatcgcaattccaattgttgaaggtgtcacttctcaagaagtacttttgcagattcaatcttttcagcattatttcgcaggaaattc |
4498723 |
T |
|
| Q |
229 |
aacccttttaattctaatctccctctcaggttgtttagcttagccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaa |
328 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4498722 |
aacccttttaattctaatctccctctcaggttgtttagctcacccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaa |
4498623 |
T |
|
| Q |
329 |
gatcagtcaactgtcctagcccccgtggcatacatgtcaatctctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatat |
428 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4498622 |
gatcagtcaactgtcctagcccacatggcatacatgtcaaactctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatat |
4498523 |
T |
|
| Q |
429 |
ttcaagcttagaacaatcagaaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttataagtacattgttccgtgatagatca |
528 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4498522 |
ttcaagcttagaacaatcagaaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttttaagtacattgttccgtgatagatca |
4498423 |
T |
|
| Q |
529 |
atatatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaagg |
628 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4498422 |
atatatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaagg |
4498323 |
T |
|
| Q |
629 |
aaaaaacatctgactgaagcaaacgattgcttgcattcatttctggactgaccacgtgaaatgtccttaacttgtaggaagatgatga |
716 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4498322 |
aaaaaacatctgactgaagaaaacgattgcttgcattcatttgtggactgaccacgtgaaatgtccttaacttgtaggaagatgatga |
4498235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 527; E-Value: 0
Query Start/End: Original strand, 129 - 719
Target Start/End: Complemental strand, 4519882 - 4519292
Alignment:
| Q |
129 |
gtcgacatgattccatcgcaattccaattgttgaaggtgttgcttctcaagaagtacttttgcagattcaatctttgcagcattatttcgcaggaaattc |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
4519882 |
gtcgacatgattccatcgcaattccaattgttgaaggtgtcgcttctcaacaagtacttttgcagattcaatctctgcagcattatttcgcaggaacttc |
4519783 |
T |
|
| Q |
229 |
aacccttttaattctaatctccctctcaggttgtttagcttagccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaa |
328 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4519782 |
aacccttttaattctaatctccctctcaggttgtttagctcacccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaa |
4519683 |
T |
|
| Q |
329 |
gatcagtcaactgtcctagcccccgtggcatacatgtcaatctctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatat |
428 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4519682 |
gatcagtcaactgtcctagcccacgtggcatacatgtcaaactctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatat |
4519583 |
T |
|
| Q |
429 |
ttcaagcttagaacaatcagaaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttataagtacattgttccgtgatagatca |
528 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4519582 |
ttcaagcttagaacaatcagaaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttttaagtacattgttccgtgatagatca |
4519483 |
T |
|
| Q |
529 |
atatatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaagg |
628 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4519482 |
atatatcttaaatgcttcatttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaagg |
4519383 |
T |
|
| Q |
629 |
aaaaaacatctgactgaagcaaacgattgcttgcattcatttctggactgaccacgtgaaatgtccttaacttgtaggaagatgatgatgt |
719 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4519382 |
aaaaatcatctgactgaagcaaacgattgcttgcatttgattgtggaccgaccacatgaaatgtccttaacttgtaggaagatgatgatgt |
4519292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 148 - 720
Target Start/End: Complemental strand, 4530051 - 4529482
Alignment:
| Q |
148 |
aattccaattgttgaaggtgttgcttctcaagaagtacttttgcagattcaatctttgcagcattatttcgcaggaaattcaacccttttaattctaatc |
247 |
Q |
| |
|
||||||||| | |||||||||| ||||||||||||||||||| || ||||||||| ||||||| ||||||||||||| ||||| ||||| |||||||| |
|
|
| T |
4530051 |
aattccaatagctgaaggtgttccttctcaagaagtacttttacaaattcaatctctgcagcagcgtttcgcaggaaatccaacctttttatttctaatc |
4529952 |
T |
|
| Q |
248 |
tccctctcaggttgtttagcttagccaactcatttacacttgtacttccagagttcagtacaaaaagtgttagtgtttgaagatcagtcaactgtcctag |
347 |
Q |
| |
|
| ||||| ||||||||||||| | | ||||||||||| | ||||||| | |||||||||||||||||| ||||||||||||| | ||||||| ||| |
|
|
| T |
4529951 |
ttcctctaaggttgtttagctcacctaactcatttacgttcgtacttctattgttcagtacaaaaagtgtcagtgtttgaagattaaccaactgtactaa |
4529852 |
T |
|
| Q |
348 |
cccccgtggcatacatgtcaatctctcgcaaccatttaactcaagatgcctgagacttctattgagattttctggcaatatttcaagcttagaacaatca |
447 |
Q |
| |
|
||| ||||||||||| |||||||||| |||||||| |||||||||||||| |||||| | |||||||||||||| |||||||| |||| |||||||||| |
|
|
| T |
4529851 |
cccttgtggcatacatctcaatctctcacaaccattcaactcaagatgcctaagacttttgttgagattttctggtaatatttcgagctcagaacaatca |
4529752 |
T |
|
| Q |
448 |
gaaagttttagagtttgcaagttcagtaggctagtaatggtcggaggaagatttataagtacattgttccgtgatagatcaatatatcttaaatgcttca |
547 |
Q |
| |
|
||||||||||||||||| | |||| |||||||||||||| ||| ||||||| | |||||||| | || |||||||||||||||||| | |||||||| |
|
|
| T |
4529751 |
gaaagttttagagtttgaaggttctgtaggctagtaatgcccggcggaagatctttaagtacaatactctttgatagatcaatatatctcagatgcttca |
4529652 |
T |
|
| Q |
548 |
tttcttcaatactatttgggatttcttcaatattcaacccacaaagtgtcaacacacgcaagaactttaagcctgagaaggaaaaaacatctgactgaag |
647 |
Q |
| |
|
| ||||||||||||||||||||| | ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| ||| | ||||||| | |
|
|
| T |
4529651 |
tctcttcaatactatttgggattgccagaatattcaatccacaaagtgtcaacacacgtaagaactttaagcctgaaaaggaaagaacgtttgactgacg |
4529552 |
T |
|
| Q |
648 |
caaacgattgcttgcattcatttctggactgaccacgtgaaatgtccttaacttgtaggaagatgatgatgtc |
720 |
Q |
| |
|
|| | ||||||||||||| ||| ||| | | | ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4529551 |
cagataattgcttgcattcgtttttgg---gcataagagaaatgttcttaacttgtaggaagatgatgatgtc |
4529482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 4530224 - 4530142
Alignment:
| Q |
29 |
actttttgccgcaaaacccatctataactagtttttgaagcgaatggtgtggctgcaggccttgtaaaatgatctcatcttcc |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |
|
|
| T |
4530224 |
actttttgccgcaaaacccatctataactagtttttgaagcgaatggtgtggctgcagaccttctaaaatcttctcatcttcc |
4530142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 4520042 - 4519957
Alignment:
| Q |
29 |
actttttgccgcaaaacccatctataactagtttttgaagcgaa---tggtgtggctgcaggccttgtaaaatgatctcatcttcc |
111 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4520042 |
actttttgccgcaaaacccatctataactagttttcgaagtgaatggtggtgtggctgcaggccttgtaaaatgatctcatcttcc |
4519957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 4498949 - 4498870
Alignment:
| Q |
35 |
tgccgcaaaacccatctataactagtttttgaagcgaatggtg---tggctgcaggccttgtaaaatgatctcatcttcc |
111 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||| || ||||| ||||||||||||| | |||||||||||||||||| |
|
|
| T |
4498949 |
tgccacaaaacccatctataactagttttcgaagtgagtggtggtgtggctgcaggcctagaaaaatgatctcatcttcc |
4498870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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