View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0410_low_10 (Length: 339)

Name: NF0410_low_10
Description: NF0410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0410_low_10
NF0410_low_10
[»] chr3 (26 HSPs)
chr3 (74-256)||(24933753-24933934)
chr3 (150-256)||(9534276-9534382)
chr3 (149-256)||(41455097-41455203)
chr3 (152-256)||(20247791-20247895)
chr3 (150-256)||(14762758-14762864)
chr3 (142-223)||(23370498-23370579)
chr3 (152-256)||(24192904-24193009)
chr3 (152-256)||(38310802-38310906)
chr3 (144-256)||(10389438-10389550)
chr3 (144-256)||(10414527-10414639)
chr3 (144-256)||(10421197-10421309)
chr3 (89-204)||(13302180-13302295)
chr3 (149-232)||(16801467-16801549)
chr3 (150-232)||(17240513-17240595)
chr3 (150-211)||(18929239-18929300)
chr3 (89-204)||(13312836-13312951)
chr3 (141-204)||(13323779-13323842)
chr3 (144-204)||(12033439-12033499)
chr3 (144-204)||(17131732-17131792)
chr3 (144-204)||(51301589-51301649)
chr3 (144-204)||(14865846-14865906)
chr3 (148-184)||(23392818-23392854)
chr3 (152-206)||(16801027-16801081)
chr3 (144-202)||(19235063-19235121)
chr3 (148-185)||(2247648-2247685)
chr3 (148-184)||(52212430-52212466)
[»] scaffold0796 (2 HSPs)
scaffold0796 (75-256)||(1656-1838)
scaffold0796 (75-256)||(5679-5861)
[»] chr6 (34 HSPs)
chr6 (74-255)||(25469630-25469808)
chr6 (144-256)||(34639981-34640093)
chr6 (144-256)||(34646655-34646767)
chr6 (149-256)||(12168312-12168418)
chr6 (149-256)||(19287221-19287327)
chr6 (149-256)||(19878405-19878511)
chr6 (149-256)||(19785869-19785975)
chr6 (149-256)||(19884181-19884287)
chr6 (149-257)||(930095-930203)
chr6 (150-256)||(23839146-23839253)
chr6 (149-231)||(18800411-18800493)
chr6 (150-256)||(23057887-23057993)
chr6 (150-223)||(4477839-4477912)
chr6 (144-256)||(10986175-10986288)
chr6 (149-256)||(29614146-29614254)
chr6 (75-165)||(14581076-14581167)
chr6 (148-205)||(24512842-24512899)
chr6 (144-221)||(31252406-31252483)
chr6 (150-202)||(9187498-9187550)
chr6 (150-206)||(25348486-25348542)
chr6 (152-206)||(25598643-25598697)
chr6 (152-215)||(21565214-21565278)
chr6 (150-206)||(25397172-25397228)
chr6 (144-202)||(11288663-11288721)
chr6 (144-202)||(15458492-15458550)
chr6 (144-202)||(15465087-15465145)
chr6 (144-177)||(28288504-28288537)
chr6 (150-206)||(19471335-19471391)
chr6 (152-206)||(2286769-2286823)
chr6 (144-202)||(9099066-9099124)
chr6 (150-184)||(18659450-18659484)
chr6 (144-202)||(20007941-20007999)
chr6 (150-184)||(24441673-24441707)
chr6 (148-184)||(29847278-29847314)
[»] chr8 (13 HSPs)
chr8 (143-256)||(44477571-44477684)
chr8 (143-256)||(44492729-44492842)
chr8 (151-256)||(17054540-17054644)
chr8 (149-256)||(23866564-23866670)
chr8 (152-223)||(8727735-8727806)
chr8 (150-232)||(23482053-23482135)
chr8 (150-206)||(18614271-18614327)
chr8 (136-205)||(25111976-25112045)
chr8 (144-204)||(24320665-24320725)
chr8 (150-206)||(39364919-39364975)
chr8 (150-204)||(29643386-29643440)
chr8 (148-205)||(14056562-14056619)
chr8 (150-206)||(21931696-21931752)
[»] scaffold0026 (2 HSPs)
scaffold0026 (144-256)||(111634-111746)
scaffold0026 (149-256)||(11850-11957)
[»] chr7 (32 HSPs)
chr7 (149-256)||(12590643-12590749)
chr7 (149-256)||(13007381-13007487)
chr7 (150-256)||(15168124-15168230)
chr7 (149-256)||(14422932-14423040)
chr7 (149-256)||(18873309-18873416)
chr7 (150-232)||(16009549-16009631)
chr7 (149-256)||(12709843-12709949)
chr7 (149-256)||(13122914-13123020)
chr7 (149-256)||(13743658-13743764)
chr7 (152-223)||(16677277-16677348)
chr7 (152-223)||(17651513-17651584)
chr7 (154-223)||(10895795-10895864)
chr7 (150-205)||(11382871-11382926)
chr7 (150-205)||(11389348-11389403)
chr7 (148-205)||(20311050-20311107)
chr7 (148-205)||(21230958-21231015)
chr7 (144-204)||(2971254-2971314)
chr7 (144-204)||(20906456-20906516)
chr7 (150-213)||(13679485-13679548)
chr7 (144-204)||(29181104-29181164)
chr7 (150-204)||(11311059-11311113)
chr7 (144-202)||(31155396-31155454)
chr7 (144-201)||(16091078-16091135)
chr7 (144-204)||(14319624-14319684)
chr7 (150-206)||(46625961-46626017)
chr7 (149-185)||(831633-831669)
chr7 (149-185)||(1196813-1196849)
chr7 (144-204)||(2465361-2465421)
chr7 (144-204)||(3857360-3857419)
chr7 (144-204)||(14230781-14230841)
chr7 (141-205)||(14567203-14567267)
chr7 (149-185)||(34958578-34958614)
[»] scaffold0384 (1 HSPs)
scaffold0384 (75-202)||(15989-16117)
[»] chr5 (17 HSPs)
chr5 (149-256)||(23528580-23528686)
chr5 (150-256)||(28370055-28370161)
chr5 (149-256)||(38144536-38144643)
chr5 (150-256)||(19512334-19512441)
chr5 (149-256)||(22751090-22751197)
chr5 (150-232)||(18407944-18408026)
chr5 (150-232)||(23111200-23111282)
chr5 (148-205)||(22438746-22438803)
chr5 (144-204)||(19236900-19236960)
chr5 (144-202)||(22461158-22461216)
chr5 (144-202)||(22467782-22467840)
chr5 (144-204)||(20781744-20781804)
chr5 (144-204)||(20772969-20773029)
chr5 (144-203)||(34830086-34830144)
chr5 (148-178)||(17021912-17021942)
chr5 (148-184)||(21663141-21663177)
chr5 (148-184)||(22356902-22356938)
[»] chr2 (18 HSPs)
chr2 (150-256)||(6483666-6483772)
chr2 (150-256)||(6487133-6487239)
chr2 (144-256)||(5706018-5706130)
chr2 (149-232)||(26583800-26583882)
chr2 (150-256)||(19661454-19661560)
chr2 (150-232)||(23265115-23265197)
chr2 (150-232)||(23280183-23280265)
chr2 (150-211)||(21908353-21908414)
chr2 (144-204)||(25180924-25180984)
chr2 (145-204)||(10577-10636)
chr2 (152-215)||(23878997-23879060)
chr2 (150-214)||(23101463-23101528)
chr2 (144-221)||(26885166-26885242)
chr2 (152-215)||(23089057-23089121)
chr2 (150-206)||(24661576-24661632)
chr2 (144-202)||(23168293-23168351)
chr2 (144-202)||(23579550-23579608)
chr2 (144-204)||(27207714-27207774)
[»] chr4 (16 HSPs)
chr4 (144-256)||(53483653-53483765)
chr4 (149-232)||(8045832-8045914)
chr4 (149-230)||(11848088-11848169)
chr4 (148-205)||(15408139-15408196)
chr4 (150-206)||(8834895-8834951)
chr4 (150-206)||(13888641-13888697)
chr4 (138-204)||(27906266-27906332)
chr4 (152-204)||(14486661-14486713)
chr4 (150-206)||(15245215-15245271)
chr4 (144-204)||(16146825-16146885)
chr4 (155-206)||(22724691-22724742)
chr4 (150-206)||(15308120-15308176)
chr4 (148-206)||(14912081-14912139)
chr4 (150-180)||(15069781-15069811)
chr4 (150-180)||(15076381-15076411)
chr4 (149-185)||(15747556-15747592)
[»] chr1 (17 HSPs)
chr1 (149-256)||(41111984-41112090)
chr1 (75-202)||(20044876-20045004)
chr1 (150-256)||(20437024-20437131)
chr1 (150-214)||(32651563-32651627)
chr1 (150-214)||(18712790-18712854)
chr1 (150-205)||(19663517-19663572)
chr1 (150-206)||(20805320-20805376)
chr1 (144-204)||(20851127-20851187)
chr1 (144-204)||(20857754-20857814)
chr1 (144-204)||(21706276-21706336)
chr1 (144-204)||(21710818-21710878)
chr1 (150-205)||(11158093-11158148)
chr1 (152-206)||(10811785-10811839)
chr1 (150-180)||(24476350-24476380)
chr1 (150-180)||(25091418-25091448)
chr1 (151-184)||(18271338-18271371)
chr1 (151-184)||(18275992-18276025)
[»] scaffold0129 (1 HSPs)
scaffold0129 (148-256)||(45273-45381)
[»] scaffold0154 (1 HSPs)
scaffold0154 (149-256)||(30805-30913)
[»] scaffold0924 (1 HSPs)
scaffold0924 (149-254)||(750-856)
[»] scaffold0247 (1 HSPs)
scaffold0247 (149-231)||(11315-11397)
[»] scaffold0553 (2 HSPs)
scaffold0553 (142-223)||(10188-10269)
scaffold0553 (75-162)||(11008-11096)
[»] scaffold0544 (1 HSPs)
scaffold0544 (142-223)||(1518-1599)
[»] scaffold0117 (2 HSPs)
scaffold0117 (149-256)||(1897-2005)
scaffold0117 (149-256)||(8574-8682)
[»] scaffold0029 (3 HSPs)
scaffold0029 (149-256)||(111830-111938)
scaffold0029 (144-204)||(91197-91257)
scaffold0029 (144-204)||(96923-96983)
[»] scaffold0456 (2 HSPs)
scaffold0456 (149-236)||(900-987)
scaffold0456 (149-236)||(8045-8132)
[»] scaffold0058 (1 HSPs)
scaffold0058 (149-256)||(240-346)
[»] scaffold1773 (1 HSPs)
scaffold1773 (149-254)||(1129-1233)
[»] scaffold0025 (1 HSPs)
scaffold0025 (152-256)||(14398-14503)
[»] scaffold0006 (1 HSPs)
scaffold0006 (149-254)||(50130-50234)
[»] scaffold0090 (1 HSPs)
scaffold0090 (149-232)||(18141-18225)
[»] scaffold0222 (1 HSPs)
scaffold0222 (150-232)||(16793-16875)
[»] scaffold0004 (2 HSPs)
scaffold0004 (150-232)||(116869-116951)
scaffold0004 (151-184)||(60441-60474)
[»] scaffold0461 (1 HSPs)
scaffold0461 (150-232)||(8-90)
[»] scaffold0146 (1 HSPs)
scaffold0146 (150-232)||(13605-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (150-232)||(101928-102010)
[»] scaffold0310 (1 HSPs)
scaffold0310 (148-205)||(17643-17700)
[»] scaffold0107 (1 HSPs)
scaffold0107 (148-205)||(40530-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (148-205)||(135473-135530)
[»] scaffold0348 (1 HSPs)
scaffold0348 (75-204)||(9336-9467)
[»] scaffold0235 (1 HSPs)
scaffold0235 (151-203)||(22594-22646)
[»] scaffold0127 (1 HSPs)
scaffold0127 (141-204)||(10239-10302)
[»] scaffold0124 (2 HSPs)
scaffold0124 (150-205)||(34276-34331)
scaffold0124 (148-206)||(35437-35495)
[»] scaffold0609 (1 HSPs)
scaffold0609 (144-221)||(5852-5929)
[»] scaffold0001 (1 HSPs)
scaffold0001 (144-221)||(493023-493099)
[»] scaffold0138 (1 HSPs)
scaffold0138 (150-206)||(12296-12352)
[»] scaffold0023 (2 HSPs)
scaffold0023 (144-204)||(135438-135498)
scaffold0023 (148-184)||(163352-163388)
[»] scaffold0317 (1 HSPs)
scaffold0317 (150-213)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (150-205)||(14997-15052)
[»] scaffold1318 (1 HSPs)
scaffold1318 (144-204)||(1907-1967)
[»] scaffold0476 (1 HSPs)
scaffold0476 (152-215)||(3295-3359)
[»] scaffold0261 (1 HSPs)
scaffold0261 (144-204)||(23564-23624)
[»] scaffold0249 (1 HSPs)
scaffold0249 (144-223)||(13889-13969)
[»] scaffold0077 (1 HSPs)
scaffold0077 (152-215)||(3624-3688)
[»] scaffold0053 (1 HSPs)
scaffold0053 (144-204)||(79485-79545)
[»] scaffold0815 (1 HSPs)
scaffold0815 (150-201)||(1453-1504)
[»] scaffold0096 (1 HSPs)
scaffold0096 (151-206)||(39508-39563)
[»] scaffold0453 (1 HSPs)
scaffold0453 (145-221)||(10546-10622)
[»] scaffold0335 (1 HSPs)
scaffold0335 (150-206)||(2628-2684)
[»] scaffold0131 (1 HSPs)
scaffold0131 (144-204)||(997-1057)
[»] scaffold0072 (1 HSPs)
scaffold0072 (144-204)||(49965-50025)
[»] scaffold2054 (1 HSPs)
scaffold2054 (149-202)||(717-770)
[»] scaffold0481 (1 HSPs)
scaffold0481 (151-196)||(676-721)
[»] scaffold0962 (1 HSPs)
scaffold0962 (148-184)||(614-650)
[»] scaffold0720 (1 HSPs)
scaffold0720 (144-204)||(3397-3457)
[»] scaffold0600 (1 HSPs)
scaffold0600 (150-206)||(732-788)
[»] scaffold0422 (1 HSPs)
scaffold0422 (148-200)||(3962-4014)
[»] scaffold0181 (1 HSPs)
scaffold0181 (148-184)||(25519-25555)
[»] scaffold0180 (1 HSPs)
scaffold0180 (150-199)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (152-204)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (150-206)||(121902-121958)
scaffold0031 (150-206)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (150-202)||(69749-69801)


Alignment Details
Target: chr3 (Bit Score: 163; Significance: 5e-87; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 24933753 - 24933934
Alignment:
Q  74 cagagaaagcaagagaaaccaagaacaaggggaaaacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtgagactatctct 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24933753 cagagaaagcaagagaaaccaagaacaaggggaaaacttaggagctgatttgcggtgttaattcttcctacaattctaaggtaagggtgagactatctct 24933852  T
Q  174 caataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtttgatgatg 256  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24933853 caataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgatgatg 24933934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 9534382 - 9534276
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   |||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  250 gatgatg 256  Q
    |||||||    
T  9534282 gatgatg 9534276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 41455097 - 41455203
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||  ||||||||||||| |    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaaaattagggat 41455195  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  41455196 tgatgatg 41455203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 20247791 - 20247895
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtttga 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||   |||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  252 tgatg 256  Q
    |||||    
T  20247891 tgatg 20247895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 14762758 - 14762864
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggttt 249  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||   |||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  250 gatgatg 256  Q
    |||||||    
T  14762858 gatgatg 14762864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 23370498 - 23370579
Alignment:
Q  142 tacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 223  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23370498 tacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 23370579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 24193009 - 24192904
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaattagggtttg 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||   ||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  251 atgatg 256  Q
    ||||||    
T  24192909 atgatg 24192904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 38310802 - 38310906
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtttga 251  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  |||   |||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  252 tgatg 256  Q
    |||||    
T  38310902 tgatg 38310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 10389438 - 10389550
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaatta 243  Q
    ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||||||||  | ||||||||||||||||    
T  10389438 caattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaatta 10389537  T
Q  244 gggtttgatgatg 256  Q
    |||||||||||||    
T  10389538 gggtttgatgatg 10389550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 10414527 - 10414639
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaatta 243  Q
    ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||||||||  | ||||||||||||||||    
T  10414527 caattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaatta 10414626  T
Q  244 gggtttgatgatg 256  Q
    |||||||||||||    
T  10414627 gggtttgatgatg 10414639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 10421197 - 10421309
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaatta 243  Q
    ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||||||||  | ||||||||||||||||    
T  10421197 caattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaatta 10421296  T
Q  244 gggtttgatgatg 256  Q
    |||||||||||||    
T  10421297 gggtttgatgatg 10421309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 13302180 - 13302295
Alignment:
Q  89 aaaccaagaacaaggggaa--aacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtgagactatctctcaataatcataat 186  Q
    ||||||||||||||||  |  ||| ||||| |||| ||||||||||  || || ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  13302180 aaaccaagaacaagggagatgaacctaggaactgatttgctgtgtt--ttttttctacaattctaaggtaagggtgagattatctttcaataatcataat 13302277  T
Q  187 ctataatttctgaaaatt 204  Q
     | |||||||||||||||    
T  13302278 atgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 16801467 - 16801549
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||| ||| ||| ||||    
T  16801467 ctaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataa 16801549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 17240513 - 17240595
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||| || ||| | ||||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataa 17240595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 211  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 13312836 - 13312951
Alignment:
Q  89 aaaccaagaacaaggggaa--aacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtgagactatctctcaataatcataat 186  Q
    ||||||||||||||||  |  ||| ||||| |||| ||||||||||  || || ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  13312836 aaaccaagaacaagggagatgaacctaggaactgatttgctgtgtt--ttttttctacaattctaaggtaagggtgagattatctttcaataatcataat 13312933  T
Q  187 ctataatttctgaaaatt 204  Q
     | |||||| ||||||||    
T  13312934 atgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 13323779 - 13323842
Alignment:
Q  141 ctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323779 ctacaattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 12033439 - 12033499
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033439 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 17131792 - 17131732
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131792 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 51301649 - 51301589
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    |||||||||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301649 caattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 14865906 - 14865846
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  14865906 caattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 14865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 23392818 - 23392854
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23392818 tctaaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 16801081 - 16801027
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801081 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 19235063 - 19235121
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||    
T  19235063 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaa 19235121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 2247648 - 2247685
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataa 185  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  2247648 tctaaggtaagggtgagactaactctcaataattataa 2247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 52212430 - 52212466
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  52212430 tctaaggtaagggtgaggctaactctcaataatcata 52212466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 141; Significance: 7e-74; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 75 - 256
Target Start/End: Original strand, 1656 - 1838
Alignment:
Q  75 agagaaagcaagagaaaccaagaacaagggg--aaaacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtgagactatctc 172  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  1656 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctc 1755  T
Q  173 tcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtttgatgatg 256  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1756 tcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatgatg 1838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 75 - 256
Target Start/End: Original strand, 5679 - 5861
Alignment:
Q  75 agagaaagcaagagaaaccaagaacaagggg--aaaacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtgagactatctc 172  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  5679 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctc 5778  T
Q  173 tcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtttgatgatg 256  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  5779 tcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatgatg 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 3e-57; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 74 - 255
Target Start/End: Original strand, 25469630 - 25469808
Alignment:
Q  74 cagagaaagcaagagaaa--ccaagaacaaggggaaaacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtgagactatct 171  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||| || ||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  25469630 cagagaaagcaagagaaaaaccaagaacaaggggaaa-cttaggagccga-ttgctgtgttaatccttcttacaat-ctaaggtaagggtgagactatct 25469726  T
Q  172 ctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtttgatgat 255  Q
    ||||||||||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  25469727 ctcaataatcataatctataatt-ctgaaa-ttgacctaattgaatggttttggaaaataatatgaaaattagggtttgatgat 25469808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 34639981 - 34640093
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaatta 243  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  34639981 caattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaatta 34640080  T
Q  244 gggtttgatgatg 256  Q
    |||||||||||||    
T  34640081 gggtttgatgatg 34640093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 34646655 - 34646767
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaatta 243  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  34646655 caattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaatta 34646754  T
Q  244 gggtttgatgatg 256  Q
    |||||||||||||    
T  34646755 gggtttgatgatg 34646767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 12168418 - 12168312
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 12168320  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  12168319 tgatgatg 12168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 19287327 - 19287221
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19287229  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  19287228 tgatgatg 19287221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 19878511 - 19878405
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19878413  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  19878412 tgatgatg 19878405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 19785869 - 19785975
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| |||||| ||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttagggtt 19785967  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  19785968 tgatgatg 19785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 19884287 - 19884181
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19884189  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  19884188 tgatgatg 19884181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 930095 - 930203
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||  |||   ||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttagggtt 930194  T
Q  249 tgatgatgt 257  Q
    |||||||||    
T  930195 tgatgatgt 930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 23839253 - 23839146
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaaaataatatgaaaattagggtt 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||   ||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  23839153 tgatgatg 23839146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 18800493 - 18800411
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaata 231  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 18800411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 23057993 - 23057887
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggttt 249  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||   |||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  250 gatgatg 256  Q
    |||||||    
T  23057893 gatgatg 23057887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 4477912 - 4477839
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 4477839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 10986175 - 10986288
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaatt 242  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||  |||   ||    
T  10986175 caattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggtt 10986274  T
Q  243 agggtttgatgatg 256  Q
    ||||||||||||||    
T  10986275 agggtttgatgatg 10986288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 29614146 - 29614254
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaa-taatatgaaaattagggt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||  |||   |||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggttagggt 29614245  T
Q  248 ttgatgatg 256  Q
    |||||||||    
T  29614246 ttgatgatg 29614254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 165
Target Start/End: Original strand, 14581076 - 14581167
Alignment:
Q  75 agagaaagcaagagaaaccaagaacaagggg-aaaacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtgaga 165  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  14581076 agagaaagcaagagaaaccaataacaagggggaaaacttaggagctgttttgctgtgttaattcttcctgcaattctaaggtaagggtgaga 14581167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 24512842 - 24512899
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512842 tctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 31252483 - 31252406
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtt 221  Q
    |||||||||||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | ||||||| ||||||    
T  31252483 caattctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagtt 31252406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 21565214 - 21565278
Alignment:
Q  152 aggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattgacctaattgc 215  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgc 21565278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 11288663 - 11288721
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| ||||| ||| |||| |||||||||||||||    
T  11288663 caattctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 11288721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 15458550 - 15458492
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15458550 caattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 15465145 - 15465087
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15465145 caattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 28288504 - 28288537
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaat 177  Q
    ||||||||||||||||||||||||||||||||||    
T  28288504 caattctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 2286769 - 2286823
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286769 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 9099066 - 9099124
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||    
T  9099066 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaa 9099124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 18659484 - 18659450
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||||| |||||||||||||||    
T  18659484 taaggtaagggtgagactaactctcaataatcata 18659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 20007941 - 20007999
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| ||  |||| |||||| ||||||| |||||||| ||||||    
T  20007941 caattctaaggtaagggtgggatcatctttcaatagtcataatatataatttatgaaaa 20007999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 24441707 - 24441673
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||||| |||||||||||||||    
T  24441707 taaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 29847278 - 29847314
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  29847278 tctaaggtaagggtgaggctaactctcaataatcata 29847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 8e-46; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 44477684 - 44477571
Alignment:
Q  143 acaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaatt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   ||    
T  44477684 acaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggtt 44477585  T
Q  243 agggtttgatgatg 256  Q
    ||||||||||||||    
T  44477584 agggtttgatgatg 44477571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 44492842 - 44492729
Alignment:
Q  143 acaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaatt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   ||    
T  44492842 acaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggtt 44492743  T
Q  243 agggtttgatgatg 256  Q
    ||||||||||||||    
T  44492742 agggtttgatgatg 44492729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 17054644 - 17054540
Alignment:
Q  151 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtttg 250  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  17054644 aaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttg 17054546  T
Q  251 atgatg 256  Q
    ||||||    
T  17054545 atgatg 17054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 23866670 - 23866564
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||  |||   ||||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggtt 23866572  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  23866571 tgatgatg 23866564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 8727735 - 8727806
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 223  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 8727806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 23482053 - 23482135
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || ||| | ||||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 23482135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 18614327 - 18614271
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 25112045 - 25111976
Alignment:
Q  136 tcttcctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    |||| |||||| ||||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112045 tctttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 24320665 - 24320725
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320665 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 14056562 - 14056619
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056562 tctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 111746 - 111634
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaatta 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   |||    
T  111746 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggtta 111647  T
Q  244 gggtttgatgatg 256  Q
    |||||||||||||    
T  111646 gggtttgatgatg 111634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 11850 - 11957
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| | ||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttagggtt 11949  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  11950 tgatgatg 11957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 12590643 - 12590749
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtt 12590741  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  12590742 tgatgatg 12590749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 13007487 - 13007381
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 13007389  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  13007388 tgatgatg 13007381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 15168230 - 15168124
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggttt 249  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||   |||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  250 gatgatg 256  Q
    |||||||    
T  15168130 gatgatg 15168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 14423040 - 14422932
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaattagggt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||   |||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggt 14422941  T
Q  248 ttgatgatg 256  Q
    |||||||||    
T  14422940 ttgatgatg 14422932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 18873416 - 18873309
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||   ||||||||    
T  18873416 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 18873317  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  18873316 tgatgatg 18873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 16009631 - 16009549
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataa 16009549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 12709843 - 12709949
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||  |||   ||||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggtt 12709941  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  12709942 tgatgatg 12709949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 13122914 - 13123020
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||  |||   ||||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggtt 13123012  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  13123013 tgatgatg 13123020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 13743764 - 13743658
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||  |||   ||||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggtt 13743666  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  13743665 tgatgatg 13743658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 16677348 - 16677277
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 16677277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 17651584 - 17651513
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 17651513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 10895795 - 10895864
Alignment:
Q  154 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 223  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttt 10895864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 20311050 - 20311107
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311050 tctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 21230958 - 21231015
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230958 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 2971314 - 2971254
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971314 caattctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 20906456 - 20906516
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906456 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 13679548 - 13679485
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 213  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 29181104 - 29181164
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  29181104 caattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 29181164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 31155454 - 31155396
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  31155454 caattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 16091135 - 16091078
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 201  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| | ||||||||||||    
T  16091135 caattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaa 16091078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 14319624 - 14319684
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| ||||| ||  |||| |||||||||||||||||    
T  14319624 caattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaatt 14319684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    |||| |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 831633 - 831669
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataa 185  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  831633 ctaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 1196813 - 1196849
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataa 185  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  1196813 ctaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 2465421 - 2465361
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| ||  |||  |||||||| ||||| ||| |||||||||||||    
T  2465421 caattctaaggtaagggtgggatcatccttcaataatgataatatatgatttctgaaaatt 2465361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 3857360 - 3857419
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  3857360 caattctaaggtaagggtgggatcatct-tcaataatgataatatatgatttctgaaaatt 3857419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 14230841 - 14230781
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| ||||| |   |||| |||||||||||||||||    
T  14230841 caattctaaggtaagggtgggattatctttcaatgaatttaatgtataatttctgaaaatt 14230781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 14567267 - 14567203
Alignment:
Q  141 ctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    |||||||||||||||||||||||| ||| |  ||||| || ||||| |||  |||||||||||||    
T  14567267 ctacaattctaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 14567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 34958614 - 34958578
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataa 185  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  34958614 ctaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 15989 - 16117
Alignment:
Q  75 agagaaagcaagagaaaccaagaacaagggg-aaaacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtgagactatctct 173  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  15989 agagaaagcaagagaaaccaagaacaagggggaaaacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatcttt 16088  T
Q  174 caataatcataatctataatttctgaaaa 202  Q
    ||||| | ||||| ||| |||||||||||    
T  16089 caatagttataatatatgatttctgaaaa 16117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 23528686 - 23528580
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 23528588  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  23528587 tgatgatg 23528580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 28370055 - 28370161
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   |||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  250 gatgatg 256  Q
    |||||||    
T  28370155 gatgatg 28370161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 38144536 - 38144643
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||   ||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 38144635  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  38144636 tgatgatg 38144643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 19512441 - 19512334
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||   ||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  19512341 tgatgatg 19512334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 22751197 - 22751090
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||   ||||||||    
T  22751197 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 22751098  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  22751097 tgatgatg 22751090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 18407944 - 18408026
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| || ||| | ||||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttcttgaaaataa 18408026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 23111200 - 23111282
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || ||| | ||||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 23111282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 22438746 - 22438803
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438746 tctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 19236960 - 19236900
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236960 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22461216 - 22461158
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461216 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22467840 - 22467782
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467840 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 20781804 - 20781744
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||||| ||||| ||| |||||||||||||    
T  20781804 caattctaaggtaagggtgggattatctttcaataattataatatatgatttctgaaaatt 20781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 20773029 - 20772969
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||||    
T  20773029 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaatt 20772969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 34830144 - 34830086
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 203  Q
    ||||||||||||||||||| || ||||| ||||||||  |||| ||||||||||||||||    
T  34830144 caattctaaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaat 34830086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 17021912 - 17021942
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaata 178  Q
    |||||||||||||||||||||||||||||||    
T  17021912 tctaaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 21663141 - 21663177
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  21663141 tctaaggtaagggtgaggctaactctcaataatcata 21663177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 22356902 - 22356938
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  22356902 tctaaggtaagggtgaggctaactctcaataatcata 22356938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 6483772 - 6483666
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   |||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  250 gatgatg 256  Q
    |||||||    
T  6483672 gatgatg 6483666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 6487239 - 6487133
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggttt 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   |||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  250 gatgatg 256  Q
    |||||||    
T  6487139 gatgatg 6487133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 144 - 256
Target Start/End: Original strand, 5706018 - 5706130
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaatt 242  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||| ||||| |||||||||||||||||    
T  5706018 caattctaaggtaagggtgagactatctctcattaatcataatctataattcctg-aaattgacctaattgaatagtttttgaaaaataatatgaaaatt 5706116  T
Q  243 agggtttgatgatg 256  Q
    ||||||||||||||    
T  5706117 agggtttgatgatg 5706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 26583882 - 26583800
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgcatagttttggaaaataa 26583800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 19661454 - 19661560
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggttt 249  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||   |||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  250 gatgatg 256  Q
    |||||||    
T  19661554 gatgatg 19661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 23265197 - 23265115
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || ||| | ||||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 23265115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 23280265 - 23280183
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || ||| | ||||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 23280183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 211  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 25180924 - 25180984
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180924 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 10636 - 10577
Alignment:
Q  145 aattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    |||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10636 aattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 23879060 - 23878997
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgc 215  Q
    |||||||||||||||||||||||| |||| || || |||||||||  |||||||||||||||||    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgc 23878997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 23101463 - 23101528
Alignment:
Q  150 taaggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattgacctaattg 214  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattg 23101528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 26885242 - 26885166
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtt 221  Q
    ||||||||||||||||||| || ||||| ||||||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885242 caattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 23089057 - 23089121
Alignment:
Q  152 aggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattgacctaattgc 215  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgc 23089121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 23168293 - 23168351
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23168293 caattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 23579550 - 23579608
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23579550 caattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 27207714 - 27207774
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| ||||| ||  |||| |||||||||||||||||    
T  27207714 caattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaatt 27207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 4e-41; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 53483765 - 53483653
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaatt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| ||||| |||||||||||||||||    
T  53483765 caattctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttttgaaaaataatatgaaaatt 53483667  T
Q  243 agggtttgatgatg 256  Q
    ||||||||||||||    
T  53483666 agggtttgatgatg 53483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 8045832 - 8045914
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaattgacctaattgcatagttttggaaaataa 8045914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 11848169 - 11848088
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaat 11848088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 15408196 - 15408139
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408196 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 27906332 - 27906266
Alignment:
Q  138 ttcctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||| |||||||||| |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906332 ttcctgcaattctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 14486713 - 14486661
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    |||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 16146825 - 16146885
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  16146825 caattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 16146885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  155 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    |||| |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 14912139 - 14912081
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    |||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  14912139 tctaaggtaagggttagactaactctcaatgattgtaatatataacttctgaaaattga 14912081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 15069811 - 15069781
Alignment:
Q  150 taaggtaagggtgagactatctctcaataat 180  Q
    |||||||||||||||||||||||||||||||    
T  15069811 taaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 15076411 - 15076381
Alignment:
Q  150 taaggtaagggtgagactatctctcaataat 180  Q
    |||||||||||||||||||||||||||||||    
T  15076411 taaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 15747556 - 15747592
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataa 185  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  15747556 ctaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 7e-40; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 41112090 - 41111984
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||| |||||| ||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttagggtt 41111992  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  41111991 tgatgatg 41111984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 20044876 - 20045004
Alignment:
Q  75 agagaaagcaagagaaaccaagaacaagggg-aaaacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtgagactatctct 173  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||  |    
T  20044876 agagaaagcaagagaaaacaagaacaagggggaaaacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatcctt 20044975  T
Q  174 caataatcataatctataatttctgaaaa 202  Q
    |||| ||| |||| ||||| |||||||||    
T  20044976 caatgatcttaatatataaattctgaaaa 20045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 20437024 - 20437131
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||   ||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  20437124 tgatgatg 20437131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 214  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 214  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 20851127 - 20851187
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851127 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 20857754 - 20857814
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857754 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 21706336 - 21706276
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706336 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 21710878 - 21710818
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710878 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 24476380 - 24476350
Alignment:
Q  150 taaggtaagggtgagactatctctcaataat 180  Q
    |||||||||||||||||||||||||||||||    
T  24476380 taaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 25091418 - 25091448
Alignment:
Q  150 taaggtaagggtgagactatctctcaataat 180  Q
    |||||||||||||||||||||||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  151 aaggtaagggtgagactatctctcaataatcata 184  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  151 aaggtaagggtgagactatctctcaataatcata 184  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 45273 - 45381
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaattaggg 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  45273 tctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttttgaaaaataatatgaaaattaggg 45371  T
Q  247 tttgatgatg 256  Q
    ||||||||||    
T  45372 tttgatgatg 45381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 30913 - 30805
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataata-tgaaaattagggt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| | |||  ||||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggattagggt 30814  T
Q  248 ttgatgatg 256  Q
    |||||||||    
T  30813 ttgatgatg 30805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 750 - 856
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaattagggt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||   |||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggttagggt 849  T
Q  248 ttgatga 254  Q
    |||||||    
T  850 ttgatga 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 11397 - 11315
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaata 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 11315  T

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Target: scaffold0553 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 10188 - 10269
Alignment:
Q  142 tacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 223  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10188 tacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 10269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 11008 - 11096
Alignment:
Q  75 agagaaagcaagagaaaccaagaacaagggg-aaaacttaggagctgagttgctgtgttaattcttcctacaattctaaggtaagggtg 162  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  11008 agagaaagcaagagaaaacaagaacaagggggaaaacttaggagctgatttgctgtgttaattcttcctaaaattctaaggtaagggtg 11096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 1518 - 1599
Alignment:
Q  142 tacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 223  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1518 tacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 1897 - 2005
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcatagttttggaaaataatatgaaaattagggt 247  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||   |||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 1996  T
Q  248 ttgatgatg 256  Q
    |||||||||    
T  1997 ttgatgatg 2005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 8574 - 8682
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcatagttttggaaaataatatgaaaattagggt 247  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||   |||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 8673  T
Q  248 ttgatgatg 256  Q
    |||||||||    
T  8674 ttgatgatg 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 111938 - 111830
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcatagttttggaaaataatatgaaaattagggt 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||  |||   |||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggttagggt 111839  T
Q  248 ttgatgatg 256  Q
    |||||||||    
T  111838 ttgatgatg 111830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 91197 - 91257
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  91197 caattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaatt 91257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 96923 - 96983
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  96923 caattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaatt 96983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 987 - 900
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatg 236  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataatatg 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 8132 - 8045
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatg 236  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataatatg 8045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 346 - 240
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||  |||   ||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggtt 248  T
Q  249 tgatgatg 256  Q
    ||||||||    
T  247 tgatgatg 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 1233 - 1129
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  |||   ||||||||    
T  1233 ctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggtt 1135  T
Q  249 tgatga 254  Q
    ||||||    
T  1134 tgatga 1129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 14398 - 14503
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataatatgaaaattagggtttg 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||   ||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  251 atgatg 256  Q
    ||||||    
T  14498 atgatg 14503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 50234 - 50130
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataatatgaaaattagggtt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  |||   ||||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggtt 50136  T
Q  249 tgatga 254  Q
    ||||||    
T  50135 tgatga 50130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 18225 - 18141
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataa 18141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 16875 - 16793
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || ||| | ||||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 16793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 116951 - 116869
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || ||| | ||||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 116869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  151 aaggtaagggtgagactatctctcaataatcata 184  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 8 - 90
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||| || ||| | ||||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataa 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 13687 - 13605
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||| || ||| | ||||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataa 13605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 101928 - 102010
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 232  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||||| || ||| | ||||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaattgttcttgaaaataa 102010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 17700 - 17643
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17700 tctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 40530 - 40587
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 135530 - 135473
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 9467 - 9336
Alignment:
Q  75 agagaaagcaagagaaaccaagaacaagggg--aaaacttaggag-ctgagttgctgtgttaat-tcttcctacaattctaaggtaagggtgagactatc 170  Q
    |||| ||||||||||||||||||||||||||  | |||||||||  |||| |||||||||   | |||  |||||||||||||||||||||| || ||||    
T  9467 agaggaagcaagagaaaccaagaacaaggggggagaacttaggaaactgaattgctgtgtctctgtct--ctacaattctaaggtaagggtgggattatc 9370  T
Q  171 tctcaataatcataatctataatttctgaaaatt 204  Q
    | |||||| ||||||| |||||||||||||||||    
T  9369 tttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 22594 - 22646
Alignment:
Q  151 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 203  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22594 aaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 10302 - 10239
Alignment:
Q  141 ctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10302 ctacaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 35437 - 35495
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    |||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  35437 tctaaggtaagggtaagactaactctcaatgattgtaatgtataacttctgaaaattga 35495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 5852 - 5929
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtt 221  Q
    ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | ||||||| ||||||    
T  5852 caattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagtt 5929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 493023 - 493099
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtt 221  Q
    |||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493023 caattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

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Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 135498 - 135438
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135498 caattctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 163388 - 163352
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  163388 tctaaggtaagggtgaggctaactctcaataatcata 163352  T

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Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 1441 - 1378
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 213  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

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Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 205  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold1318 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 1907 - 1967
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||| ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1907 caattgtaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0476 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 3295 - 3359
Alignment:
Q  152 aggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattgacctaattgc 215  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgc 3359  T

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Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 23564 - 23624
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| | ||| |||||||| |||||||||||||||||    
T  23564 caattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaatt 23624  T

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Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 13889 - 13969
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcatagtttt 223  Q
    ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||| |||||| | ||||||| ||||||||    
T  13889 caattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaaattaatctaattgaatagtttt 13969  T

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Target: scaffold0077 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 3624 - 3688
Alignment:
Q  152 aggtaagggtgagactatctctcaataat-cataatctataatttctgaaaattgacctaattgc 215  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgc 3688  T

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Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 79485 - 79545
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  79485 caattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 79545  T

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Target: scaffold0815 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 1504 - 1453
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 201  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1504 taaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 39508 - 39563
Alignment:
Q  151 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    |||||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39508 aaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0453 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 10546 - 10622
Alignment:
Q  145 aattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtt 221  Q
    |||||||||||||| ||| || ||||| ||||| ||| |||| ||||||||||||||||| | ||||| | ||||||    
T  10546 aattctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagtt 10622  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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Target: scaffold0131 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 1057 - 997
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| ||  ||||||||||| | ||||| ||| |||||||||||||    
T  1057 caattctaaggtaagggtgggatcatctctcaatagtgataatatatgatttctgaaaatt 997  T

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Target: scaffold0072 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 49965 - 50025
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||| ||||||    
T  49965 caattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctaaaaatt 50025  T

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Target: scaffold2054 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 770 - 717
Alignment:
Q  149 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    |||||||||||||| || ||||| ||||| ||| |||| |||||||||||||||    
T  770 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 717  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 676 - 721
Alignment:
Q  151 aaggtaagggtgagactatctctcaataatcataatctataatttc 196  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  676 aaggtaagggtgagactaactctcaatgatcttaatgtataatttc 721  T

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Target: scaffold0962 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 614 - 650
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  614 tctaaggtaagggtgaggctaactctcaataatcata 650  T

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Target: scaffold0720 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 3397 - 3457
Alignment:
Q  144 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    |||||||||||||||||||| | ||||| ||||| |   |||| |||||||||||||||||    
T  3397 caattctaaggtaagggtgatattatctttcaatgaatttaatatataatttctgaaaatt 3457  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 788 - 732
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||| ||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  788 taaggtaggggtgaggctaactctcaatgattataatatataacttctgaaaattga 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 4014 - 3962
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 200  Q
    ||||||||||||||||||||| |  |||||||||||| | ||||| |||||||    
T  4014 tctaaggtaagggtgagactaacattcaataatcatagtgtataaattctgaa 3962  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 25519 - 25555
Alignment:
Q  148 tctaaggtaagggtgagactatctctcaataatcata 184  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  25519 tctaaggtaagggtgaggctaactctcaataatcata 25555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 11681 - 11630
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataa--tctataatttctga 199  Q
    ||||||||||||||||||| ||||||||||| ||||  | ||||||||||||    
T  11681 taaggtaagggtgagactaactctcaataattataaattatataatttctga 11630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 73337 - 73285
Alignment:
Q  152 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 204  Q
    ||||||||||| || ||||| ||||| |||||||| |||||||| ||||||||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaatt 73285  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 121958 - 121902
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  121958 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 121902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 132834 - 132778
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 206  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  132834 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 132778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 69801 - 69749
Alignment:
Q  150 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 202  Q
    ||||||||||||||||||| || ||||| ||| |||| |||||||| ||||||    
T  69801 taaggtaagggtgagactaactttcaatgatcttaatatataatttatgaaaa 69749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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