View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0410_low_12 (Length: 335)

Name: NF0410_low_12
Description: NF0410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0410_low_12
NF0410_low_12
[»] chr6 (25 HSPs)
chr6 (74-251)||(25469630-25469808)
chr6 (148-252)||(12168312-12168418)
chr6 (148-252)||(19287221-19287327)
chr6 (148-252)||(19878405-19878511)
chr6 (148-252)||(19785869-19785975)
chr6 (148-252)||(19884181-19884287)
chr6 (147-252)||(34639985-34640093)
chr6 (147-252)||(34646659-34646767)
chr6 (149-252)||(23057887-23057993)
chr6 (149-220)||(4477839-4477912)
chr6 (148-253)||(930095-930203)
chr6 (149-211)||(23839189-23839253)
chr6 (148-225)||(18800414-18800493)
chr6 (148-225)||(29614146-29614225)
chr6 (147-220)||(10986179-10986254)
chr6 (145-193)||(24512840-24512888)
chr6 (149-185)||(9187514-9187550)
chr6 (75-164)||(14581076-14581167)
chr6 (149-203)||(18659427-18659484)
chr6 (144-183)||(29847275-29847314)
chr6 (144-190)||(1588753-1588799)
chr6 (149-183)||(24441673-24441707)
chr6 (149-179)||(25348512-25348542)
chr6 (149-202)||(28709565-28709619)
chr6 (147-176)||(28288508-28288537)
[»] chr3 (25 HSPs)
chr3 (74-252)||(24933753-24933934)
chr3 (148-252)||(41455097-41455203)
chr3 (149-225)||(9534304-9534382)
chr3 (151-252)||(20247791-20247895)
chr3 (149-252)||(14762758-14762864)
chr3 (151-252)||(38310802-38310906)
chr3 (147-220)||(23370504-23370579)
chr3 (151-220)||(24192938-24193009)
chr3 (147-252)||(10389442-10389550)
chr3 (147-252)||(10414531-10414639)
chr3 (147-252)||(10421201-10421309)
chr3 (149-193)||(18929256-18929300)
chr3 (148-183)||(16801467-16801502)
chr3 (149-214)||(17240513-17240580)
chr3 (144-183)||(23392815-23392854)
chr3 (144-198)||(17513830-17513884)
chr3 (144-184)||(2247645-2247685)
chr3 (144-203)||(52212427-52212489)
chr3 (149-202)||(5842872-5842926)
chr3 (147-185)||(13302239-13302277)
chr3 (147-185)||(13312895-13312933)
chr3 (147-185)||(13323786-13323824)
chr3 (149-198)||(29171853-29171902)
chr3 (144-176)||(13837163-13837195)
chr3 (148-203)||(18366514-18366572)
[»] scaffold0796 (2 HSPs)
scaffold0796 (75-252)||(1656-1838)
scaffold0796 (75-252)||(5679-5861)
[»] scaffold0129 (1 HSPs)
scaffold0129 (145-252)||(45271-45381)
[»] chr7 (24 HSPs)
chr7 (148-252)||(12590643-12590749)
chr7 (148-252)||(13007381-13007487)
chr7 (148-252)||(12709843-12709949)
chr7 (148-252)||(13122914-13123020)
chr7 (148-225)||(13743686-13743764)
chr7 (149-224)||(16009554-16009631)
chr7 (148-220)||(14422966-14423040)
chr7 (149-252)||(15168124-15168230)
chr7 (148-252)||(18873309-18873416)
chr7 (151-220)||(16677277-16677348)
chr7 (151-220)||(17651513-17651584)
chr7 (153-220)||(10895795-10895864)
chr7 (149-193)||(11382871-11382915)
chr7 (149-193)||(11389348-11389392)
chr7 (145-193)||(20311048-20311096)
chr7 (145-193)||(21230956-21231004)
chr7 (146-202)||(41285028-41285085)
chr7 (144-195)||(29005074-29005125)
chr7 (149-179)||(11311083-11311113)
chr7 (144-190)||(15727362-15727408)
chr7 (148-184)||(831633-831669)
chr7 (148-184)||(1196813-1196849)
chr7 (149-193)||(13679504-13679548)
chr7 (148-184)||(34958578-34958614)
[»] chr4 (9 HSPs)
chr4 (147-252)||(53483653-53483761)
chr4 (148-225)||(8045832-8045910)
chr4 (148-194)||(11848123-11848169)
chr4 (146-193)||(15408150-15408197)
chr4 (149-179)||(15069781-15069811)
chr4 (149-179)||(15076381-15076411)
chr4 (149-193)||(8834907-8834951)
chr4 (149-193)||(13888653-13888697)
chr4 (148-184)||(15747556-15747592)
[»] chr5 (11 HSPs)
chr5 (148-252)||(23528580-23528686)
chr5 (149-252)||(28370055-28370161)
chr5 (148-252)||(38144536-38144643)
chr5 (149-220)||(19512368-19512441)
chr5 (148-252)||(22751090-22751197)
chr5 (145-193)||(22438744-22438792)
chr5 (149-214)||(18407944-18408011)
chr5 (149-214)||(23111200-23111267)
chr5 (144-177)||(17021909-17021942)
chr5 (144-203)||(21663138-21663200)
chr5 (144-183)||(22356899-22356938)
[»] chr2 (10 HSPs)
chr2 (147-252)||(5706022-5706130)
chr2 (148-225)||(26583804-26583882)
chr2 (149-225)||(6483694-6483772)
chr2 (149-225)||(6487161-6487239)
chr2 (149-252)||(19661454-19661560)
chr2 (149-214)||(23265130-23265197)
chr2 (149-214)||(23280198-23280265)
chr2 (149-193)||(21908370-21908414)
chr2 (146-202)||(37380503-37380560)
chr2 (144-184)||(19802370-19802410)
[»] chr8 (11 HSPs)
chr8 (150-252)||(17054540-17054644)
chr8 (148-225)||(23866592-23866670)
chr8 (147-225)||(44477599-44477679)
chr8 (147-225)||(44492757-44492837)
chr8 (151-220)||(8727735-8727806)
chr8 (149-214)||(23482053-23482120)
chr8 (149-193)||(18614283-18614327)
chr8 (145-179)||(14056560-14056594)
chr8 (145-179)||(25112001-25112035)
chr8 (149-179)||(39364945-39364975)
chr8 (149-185)||(29643386-29643422)
[»] chr1 (14 HSPs)
chr1 (148-252)||(41111984-41112090)
chr1 (149-220)||(20437024-20437097)
chr1 (75-199)||(20044876-20045003)
chr1 (149-212)||(32651562-32651627)
chr1 (149-214)||(18712787-18712854)
chr1 (144-198)||(7791554-7791608)
chr1 (149-193)||(19663517-19663561)
chr1 (149-179)||(24476350-24476380)
chr1 (149-179)||(25091418-25091448)
chr1 (150-183)||(18271338-18271371)
chr1 (150-183)||(18275992-18276025)
chr1 (151-179)||(10811785-10811813)
chr1 (149-193)||(11158104-11158148)
chr1 (149-193)||(20805332-20805376)
[»] scaffold1773 (1 HSPs)
scaffold1773 (148-225)||(1155-1233)
[»] scaffold0006 (1 HSPs)
scaffold0006 (148-225)||(50156-50234)
[»] scaffold0026 (2 HSPs)
scaffold0026 (148-252)||(11850-11957)
scaffold0026 (147-225)||(111662-111742)
[»] scaffold0058 (1 HSPs)
scaffold0058 (148-225)||(268-346)
[»] scaffold0154 (1 HSPs)
scaffold0154 (148-224)||(30835-30913)
[»] scaffold0117 (2 HSPs)
scaffold0117 (148-252)||(1897-2005)
scaffold0117 (148-252)||(8574-8682)
[»] scaffold0029 (1 HSPs)
scaffold0029 (148-252)||(111830-111938)
[»] scaffold0247 (1 HSPs)
scaffold0247 (148-225)||(11318-11397)
[»] scaffold0924 (1 HSPs)
scaffold0924 (148-220)||(750-824)
[»] scaffold0553 (2 HSPs)
scaffold0553 (147-220)||(10194-10269)
scaffold0553 (75-161)||(11008-11096)
[»] scaffold0544 (1 HSPs)
scaffold0544 (147-220)||(1524-1599)
[»] scaffold0456 (2 HSPs)
scaffold0456 (148-232)||(900-987)
scaffold0456 (148-232)||(8045-8132)
[»] scaffold0025 (1 HSPs)
scaffold0025 (151-220)||(14398-14469)
[»] scaffold0090 (1 HSPs)
scaffold0090 (148-211)||(18160-18225)
[»] scaffold0384 (1 HSPs)
scaffold0384 (75-177)||(15989-16093)
[»] scaffold0310 (1 HSPs)
scaffold0310 (145-193)||(17654-17702)
[»] scaffold0107 (1 HSPs)
scaffold0107 (145-193)||(40528-40576)
[»] scaffold0019 (1 HSPs)
scaffold0019 (145-193)||(135484-135532)
[»] scaffold0222 (1 HSPs)
scaffold0222 (149-214)||(16808-16875)
[»] scaffold0020 (1 HSPs)
scaffold0020 (149-214)||(101928-101995)
[»] scaffold0004 (2 HSPs)
scaffold0004 (149-214)||(116884-116951)
scaffold0004 (150-183)||(60441-60474)
[»] scaffold0235 (1 HSPs)
scaffold0235 (145-193)||(22589-22637)
[»] scaffold0461 (1 HSPs)
scaffold0461 (149-214)||(8-75)
[»] scaffold0146 (1 HSPs)
scaffold0146 (149-214)||(13620-13687)
[»] scaffold0962 (1 HSPs)
scaffold0962 (144-203)||(611-673)
[»] scaffold0124 (1 HSPs)
scaffold0124 (149-193)||(34276-34320)
[»] scaffold0181 (1 HSPs)
scaffold0181 (144-183)||(25516-25555)
[»] scaffold0815 (1 HSPs)
scaffold0815 (149-202)||(1450-1504)
[»] scaffold0679 (1 HSPs)
scaffold0679 (149-202)||(1584-1638)
[»] scaffold0481 (1 HSPs)
scaffold0481 (144-193)||(670-719)
[»] scaffold0023 (1 HSPs)
scaffold0023 (146-183)||(163352-163389)
[»] scaffold0413 (1 HSPs)
scaffold0413 (144-176)||(11683-11715)
[»] scaffold0317 (1 HSPs)
scaffold0317 (149-193)||(1397-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (149-193)||(14997-15041)
[»] scaffold0138 (1 HSPs)
scaffold0138 (149-193)||(12308-12352)
[»] scaffold0071 (1 HSPs)
scaffold0071 (144-176)||(52025-52057)
[»] scaffold0001 (1 HSPs)
scaffold0001 (144-203)||(152106-152166)


Alignment Details
Target: chr6 (Bit Score: 144; Significance: 1e-75; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 25469630 - 25469808
Alignment:
Q  74 cagagagagcaagagaaaa-ccaagaacaaggggaaaacttaggagccgattgccgtgttaattcttcttacaatctaaggtaagggtgagactatctct 172  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  25469630 cagagaaagcaagagaaaaaccaagaacaaggggaaa-cttaggagccgattgctgtgttaatccttcttacaatctaaggtaagggtgagactatctct 25469728  T
Q  173 caataatcataatctataattctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttgatgat 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25469729 caataatcataatctataattctgaaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgatgat 25469808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 12168418 - 12168312
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 12168319  T
Q  246 gatgatg 252  Q
    |||||||    
T  12168318 gatgatg 12168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 19287327 - 19287221
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 19287228  T
Q  246 gatgatg 252  Q
    |||||||    
T  19287227 gatgatg 19287221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 19878511 - 19878405
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 19878412  T
Q  246 gatgatg 252  Q
    |||||||    
T  19878411 gatgatg 19878405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 19785869 - 19785975
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||| |||||| |||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctagttgaatagttttggaaaataaaatgaaagttagggttt 19785968  T
Q  246 gatgatg 252  Q
    |||||||    
T  19785969 gatgatg 19785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 19884287 - 19884181
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 245  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 19884188  T
Q  246 gatgatg 252  Q
    |||||||    
T  19884187 gatgatg 19884181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 34639985 - 34640093
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttgg-aaataatatgaaaattagggt 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  34639985 tctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggt 34640084  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  34640085 ttgatgatg 34640093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 34646659 - 34646767
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttgg-aaataatatgaaaattagggt 243  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||  |||||| |||||||| ||||||||||||    
T  34646659 tctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggt 34646758  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  34646759 ttgatgatg 34646767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 23057993 - 23057887
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt-ctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggttt 245  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  246 gatgatg 252  Q
    |||||||    
T  23057893 gatgatg 23057887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 4477912 - 4477839
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 4477839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 253
Target Start/End: Original strand, 930095 - 930203
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctata-attctg-aaattgacctaattgaatggttttg-gaaataatatgaaaattagggtt 244  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| || ||||||  ||||||  |||   ||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttagggtt 930194  T
Q  245 tgatgatgt 253  Q
    |||||||||    
T  930195 tgatgatgt 930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 23839253 - 23839189
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 23839189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 18800493 - 18800414
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 225  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaa 18800414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 29614146 - 29614225
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||  |||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaa 29614225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 10986179 - 10986254
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttct-gaaattgacctaattgaatggtttt 220  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||| || |||||    
T  10986179 tctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 10986254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 24512840 - 24512888
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    |||||||||| |||||||||||||||||||||||||||| | |||||||    
T  24512840 aatctaaggtgagggtgagactatctctcaataatcatagtatataatt 24512888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 9187550 - 9187514
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataat 185  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaat 9187514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 14581076 - 14581167
Alignment:
Q  75 agagagagcaagagaaaaccaagaacaagggg-aaaacttaggagccgatt-gccgtgttaattcttcttacaat-ctaaggtaagggtgaga 164  Q
    ||||| ||||||||||| |||| ||||||||| ||||||||||||| | || || ||||||||||||| | |||| |||||||||||||||||    
T  14581076 agagaaagcaagagaaa-ccaataacaagggggaaaacttaggagctgttttgctgtgttaattcttcctgcaattctaaggtaagggtgaga 14581167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 18659484 - 18659427
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 203  Q
    ||||||||||||||||||| ||||||||||||||| | |||   ||||||||||||||    
T  18659484 taaggtaagggtgagactaactctcaataatcatagtgtatgtaaattctgaaattga 18659427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 29847275 - 29847314
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcata 183  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  29847275 caatctaaggtaagggtgaggctaactctcaataatcata 29847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 1588799 - 1588753
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataatctata 190  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||    
T  1588799 caatctaaggtaagggtgagactaactctcaatgattatagtctata 1588753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 24441707 - 24441673
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcata 183  Q
    ||||||||||||||||||| |||||||||||||||    
T  24441707 taaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 25348542 - 25348512
Alignment:
Q  149 taaggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataat 25348512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 28709619 - 28709565
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcat-aatctataattctgaaattg 202  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||||||||||||    
T  28709619 taaggtaagggtgagactatcattcaatgatcttaaatctataattctgaaattg 28709565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 176
Target Start/End: Original strand, 28288508 - 28288537
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaat 176  Q
    ||||||||||||||||||||||||||||||    
T  28288508 tctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 24933753 - 24933934
Alignment:
Q  74 cagagagagcaagagaaaaccaagaacaaggggaaaacttaggagccgatt-gccgtgttaattcttcttacaat-ctaaggtaagggtgagactatctc 171  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||| || ||||||||||||| |||||| ||||||||||||||||||||||||    
T  24933753 cagagaaagcaagagaaa-ccaagaacaaggggaaaacttaggagctgatttgcggtgttaattcttcctacaattctaaggtaagggtgagactatctc 24933851  T
Q  172 tcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttgatgatg 252  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  24933852 tcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgatgatg 24933934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 41455097 - 41455203
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||  ||||||||||||| ||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataggatgaaaattagggatt 41455196  T
Q  246 gatgatg 252  Q
    |||||||    
T  41455197 gatgatg 41455203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 9534382 - 9534304
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 9534304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 20247791 - 20247895
Alignment:
Q  151 aggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggtttga 247  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  248 tgatg 252  Q
    |||||    
T  20247891 tgatg 20247895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 14762758 - 14762864
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggttt 245  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  246 gatgatg 252  Q
    |||||||    
T  14762858 gatgatg 14762864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 252
Target Start/End: Original strand, 38310802 - 38310906
Alignment:
Q  151 aggtaagggtgagactatctctcaataatcataatctataa-ttctgaa-attgacctaattgaatggttttggaa-ataatatgaaaattagggtttga 247  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||| || ||||||||| ||||  |||   |||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  248 tgatg 252  Q
    |||||    
T  38310902 tgatg 38310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 23370504 - 23370579
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  23370504 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 23370579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 24193009 - 24192938
Alignment:
Q  151 aggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 24192938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 10389442 - 10389550
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaat-tgacctaattgaatggttttgga-aataatatgaaaattagggt 243  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||| ||||||  | | |||||||||| |||||  | ||||||||||||||||||||    
T  10389442 tctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggt 10389541  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  10389542 ttgatgatg 10389550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 10414531 - 10414639
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaat-tgacctaattgaatggttttgga-aataatatgaaaattagggt 243  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||| ||||||  | | |||||||||| |||||  | ||||||||||||||||||||    
T  10414531 tctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggt 10414630  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  10414631 ttgatgatg 10414639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 10421201 - 10421309
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaat-tgacctaattgaatggttttgga-aataatatgaaaattagggt 243  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||| ||||||  | | |||||||||| |||||  | ||||||||||||||||||||    
T  10421201 tctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggt 10421300  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  10421301 ttgatgatg 10421309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 18929300 - 18929256
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatt 18929256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 183
Target Start/End: Original strand, 16801467 - 16801502
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcata 183  Q
    ||||||||||||||||||||||||||||||||||||    
T  16801467 ctaaggtaagggtgagactatctctcaataatcata 16801502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 17240513 - 17240580
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    |||||||||||||||||||||||||||||||| ||||  |||| ||||| ||||||| ||||||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaat 17240580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 23392815 - 23392854
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcata 183  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  23392815 caatctaaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 17513884 - 17513830
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataatctataattctgaa 198  Q
    |||||||||||||||||||||||| | |||| |||||||| | ||||||||||||    
T  17513884 caatctaaggtaagggtgagactaacactcagtaatcatagtgtataattctgaa 17513830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 2247645 - 2247685
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataa 184  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  2247645 caatctaaggtaagggtgagactaactctcaataattataa 2247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 52212427 - 52212489
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 203  Q
    |||||||||||||||||||| ||| ||||||||||||||| | |||   ||||||||||||||    
T  52212427 caatctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattga 52212489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 5842926 - 5842872
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcat-aatctataattctgaaattg 202  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||||||||||||    
T  5842926 taaggtaagggtgagactatcattcaatgatcttaaatctataattctgaaattg 5842872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 13302239 - 13302277
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataat 185  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  13302239 tctaaggtaagggtgagattatctttcaataatcataat 13302277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 13312895 - 13312933
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataat 185  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  13312895 tctaaggtaagggtgagattatctttcaataatcataat 13312933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 13323786 - 13323824
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataat 185  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  13323786 tctaaggtaagggtgagattatctttcaataatcataat 13323824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 29171853 - 29171902
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataattctgaa 198  Q
    ||||||||||||||||||| | |||| |||||||| | ||||||||||||    
T  29171853 taaggtaagggtgagactaacactcagtaatcatagtgtataattctgaa 29171902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 13837195 - 13837163
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaat 176  Q
    |||||||||||||||||||||||| ||||||||    
T  13837195 caatctaaggtaagggtgagactaactctcaat 13837163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 18366514 - 18366572
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 203  Q
    |||||||||||||||| ||| ||||||||||||||| | |||   ||||||||||||||    
T  18366514 ctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattga 18366572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 75 - 252
Target Start/End: Original strand, 1656 - 1838
Alignment:
Q  75 agagagagcaagagaaaaccaagaacaagggg--aaaacttaggagccgatt-gccgtgttaattcttcttacaat-ctaaggtaagggtgagactatct 170  Q
    ||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| || ||||||||||||| |||||  |||||||||||||||||||||||    
T  1656 agagaaagcaagagaaa-ccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatct 1754  T
Q  171 ctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttgatgatg 252  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  1755 ctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatgatg 1838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 75 - 252
Target Start/End: Original strand, 5679 - 5861
Alignment:
Q  75 agagagagcaagagaaaaccaagaacaagggg--aaaacttaggagccgatt-gccgtgttaattcttcttacaat-ctaaggtaagggtgagactatct 170  Q
    ||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| || ||||||||||||| |||||  |||||||||||||||||||||||    
T  5679 agagaaagcaagagaaa-ccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatct 5777  T
Q  171 ctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttgatgatg 252  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  5778 ctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatgatg 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 45271 - 45381
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg--aaataatatgaaaattagg 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  |||||||||||||||||||    
T  45271 aatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgaatagtttttgaaaaataatatgaaaattagg 45370  T
Q  242 gtttgatgatg 252  Q
    |||||||||||    
T  45371 gtttgatgatg 45381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 12590643 - 12590749
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataatatgaaagttagggttt 12590742  T
Q  246 gatgatg 252  Q
    |||||||    
T  12590743 gatgatg 12590749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 13007487 - 13007381
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 13007388  T
Q  246 gatgatg 252  Q
    |||||||    
T  13007387 gatgatg 13007381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 12709843 - 12709949
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataattc-tgaaattgacctaattgaatggttttggaaa-taatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||| |||  |||   |||||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 12709942  T
Q  246 gatgatg 252  Q
    |||||||    
T  12709943 gatgatg 12709949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 13122914 - 13123020
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataattc-tgaaattgacctaattgaatggttttggaaa-taatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||| |||  |||   |||||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 13123013  T
Q  246 gatgatg 252  Q
    |||||||    
T  13123014 gatgatg 13123020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 13743764 - 13743686
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttggaaa 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaa 13743686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 16009631 - 16009554
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaa 16009554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 14423040 - 14422966
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 14422966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 15168230 - 15168124
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggttt 245  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  246 gatgatg 252  Q
    |||||||    
T  15168130 gatgatg 15168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 18873416 - 18873309
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggtt 244  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  18873416 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 18873317  T
Q  245 tgatgatg 252  Q
    ||||||||    
T  18873316 tgatgatg 18873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 16677348 - 16677277
Alignment:
Q  151 aggtaagggtgagactatctctcaataatcataatctataa-ttct-gaaattgacctaattgaatggtttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||| || |||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 16677277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 17651584 - 17651513
Alignment:
Q  151 aggtaagggtgagactatctctcaataatcataatctataa-ttct-gaaattgacctaattgaatggtttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||| || |||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 17651513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 10895795 - 10895864
Alignment:
Q  153 gtaagggtgagactatctctcaataatcataatctataattct--gaaattgacctaattgaatggtttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||| || |||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttt 10895864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 11382871 - 11382915
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatt 11382915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 11389348 - 11389392
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatt 11389392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 20311048 - 20311096
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  20311048 aatctaaggtaagggtgagactatctctcaataatcataacgtataatt 20311096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 21230956 - 21231004
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  21230956 aatctaaggtaagggtgagactatctctcaataatcatagtatataatt 21231004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 41285085 - 41285028
Alignment:
Q  146 atctaaggtaagggtgagactatctctcaataatcataa-tctataattctgaaattg 202  Q
    ||||||||||||||||||||||||  ||| | ||||||| ||||||||||||||||||    
T  41285085 atctaaggtaagggtgagactatcattcagtgatcataagtctataattctgaaattg 41285028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 29005125 - 29005074
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataatctataattct 195  Q
    |||||||||||||||||||||||| | |||| |||||||| | |||||||||    
T  29005125 caatctaaggtaagggtgagactaacactcagtaatcatagtatataattct 29005074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 11311113 - 11311083
Alignment:
Q  149 taaggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||||    
T  11311113 taaggtaagggtgagactatctctcaataat 11311083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 15727362 - 15727408
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataatctata 190  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||    
T  15727362 caatctaaggtaagggtgagactaactctcaatgattatagtctata 15727408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 831633 - 831669
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataa 184  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  831633 ctaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 1196813 - 1196849
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataa 184  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  1196813 ctaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 13679548 - 13679504
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatt 13679504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 34958614 - 34958578
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataa 184  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  34958614 ctaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 53483761 - 53483653
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg--aaataatatgaaaattagggt 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  |||||||||||||||||||||    
T  53483761 tctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  53483661 ttgatgatg 53483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 8045832 - 8045910
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttggaaa 225  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaattgacctaattgcatagttttggaaa 8045910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 11848169 - 11848123
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataattc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattc 11848123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 15408197 - 15408150
Alignment:
Q  146 atctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  15408197 atctaaggtaagggtgagactatctctcaataatcatagtatataatt 15408150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 15069811 - 15069781
Alignment:
Q  149 taaggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||||    
T  15069811 taaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 15076411 - 15076381
Alignment:
Q  149 taaggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||||    
T  15076411 taaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 8834951 - 8834907
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatt 8834907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 13888697 - 13888653
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatt 13888653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 15747556 - 15747592
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataa 184  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  15747556 ctaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 7e-37; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 23528686 - 23528580
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 23528587  T
Q  246 gatgatg 252  Q
    |||||||    
T  23528586 gatgatg 23528580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 28370055 - 28370161
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaa-ttgacctaattgaatggttttggaaa-taatatgaaaattagggttt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| || |||||||||| |||  |||   |||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  246 gatgatg 252  Q
    |||||||    
T  28370155 gatgatg 28370161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 38144536 - 38144643
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaa-ttgacctaattgaatggttttggaaa-taatatgaaaattagggtt 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||  ||||||||| |||  |||   ||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 38144635  T
Q  245 tgatgatg 252  Q
    ||||||||    
T  38144636 tgatgatg 38144643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 19512441 - 19512368
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 19512368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 22751197 - 22751090
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggtt 244  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  22751197 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 22751098  T
Q  245 tgatgatg 252  Q
    ||||||||    
T  22751097 tgatgatg 22751090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 22438744 - 22438792
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22438744 aatctaaggtaagggtgagactatctctcaataatcataatgtataatt 22438792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 18407944 - 18408011
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaat 18408011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 23111200 - 23111267
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 23111267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 17021909 - 17021942
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaata 177  Q
    ||||||||||||||||||||||||||||||||||    
T  17021909 caatctaaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 21663138 - 21663200
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 203  Q
    |||||||||||||||||||| ||| ||||||||||||||| | |||   ||||||||||||||    
T  21663138 caatctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattga 21663200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 22356899 - 22356938
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcata 183  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  22356899 caatctaaggtaagggtgaggctaactctcaataatcata 22356938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 5706022 - 5706130
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg--aaataatatgaaaattagggt 243  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |  |||||||||||||||||||||    
T  5706022 tctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaattgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  5706122 ttgatgatg 5706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 26583882 - 26583804
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttggaaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgcatagttttggaaa 26583804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 6483772 - 6483694
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 6483694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 6487239 - 6487161
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 6487161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 19661454 - 19661560
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggttt 245  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  246 gatgatg 252  Q
    |||||||    
T  19661554 gatgatg 19661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 23265197 - 23265130
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 23265130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 23280265 - 23280198
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 23280198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 21908414 - 21908370
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatt 21908370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 37380560 - 37380503
Alignment:
Q  146 atctaaggtaagggtgagactatctctcaataatcataa-tctataattctgaaattg 202  Q
    ||||||||||||||||||||||||  ||| | ||| ||| ||||||||||||||||||    
T  37380560 atctaaggtaagggtgagactatcattcagtgatcttaagtctataattctgaaattg 37380503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 19802410 - 19802370
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataa 184  Q
    ||||| |||||||||||||||||| ||||||||||| ||||    
T  19802410 caatcaaaggtaagggtgagactaactctcaataattataa 19802370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 17054644 - 17054540
Alignment:
Q  150 aaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttga 247  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| |||||| |||||||||||    
T  17054644 aaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggtttga 17054545  T
Q  248 tgatg 252  Q
    |||||    
T  17054544 tgatg 17054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 23866670 - 23866592
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttggaaa 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaa 23866592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 44477679 - 44477599
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  44477679 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 44477599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 44492837 - 44492757
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  44492837 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 44492757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 8727735 - 8727806
Alignment:
Q  151 aggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    |||||||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 8727806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 23482053 - 23482120
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 23482120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 18614327 - 18614283
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatt 18614283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 14056560 - 14056594
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||||||||    
T  14056560 aatctaaggtaagggtgagactatctctcaataat 14056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 25112035 - 25112001
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||||||||    
T  25112035 aatctaaggtaagggtgagactatctctcaataat 25112001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 39364975 - 39364945
Alignment:
Q  149 taaggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataat 39364945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 29643386 - 29643422
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataat 185  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataat 29643422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 41112090 - 41111984
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttg-gaaataatatgaaaattagggttt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| |||||| |||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttgaaaaataagatgaaagttagggttt 41111991  T
Q  246 gatgatg 252  Q
    |||||||    
T  41111990 gatgatg 41111984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 20437024 - 20437097
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 20437097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 20044876 - 20045003
Alignment:
Q  75 agagagagcaagagaaaaccaagaacaagggg-aaaacttaggagccga-ttgccgtgttaattcttcttacaa-tctaaggtaagggtgagactatctc 171  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| ||||||||||||| ||||| ||||||||||||||| || ||||      
T  20044876 agagaaagcaagagaaaac-aagaacaagggggaaaacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatcct 20044974  T
Q  172 tcaataatcataatctat-aattctgaaa 199  Q
    ||||| ||| |||| ||| ||||||||||    
T  20044975 tcaatgatcttaatatataaattctgaaa 20045003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 32651627 - 32651562
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattga 212  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattga 32651562  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 18712854 - 18712787
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    ||||||| ||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 18712787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 7791554 - 7791608
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataatctataattctgaa 198  Q
    |||||||||||||||||||||||| | |||| |||||||| | ||||||||||||    
T  7791554 caatctaaggtaagggtgagactaacactcagtaatcatagtgtataattctgaa 7791608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 19663517 - 19663561
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatt 19663561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 24476380 - 24476350
Alignment:
Q  149 taaggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||||    
T  24476380 taaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 25091418 - 25091448
Alignment:
Q  149 taaggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  150 aaggtaagggtgagactatctctcaataatcata 183  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  150 aaggtaagggtgagactatctctcaataatcata 183  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 10811785 - 10811813
Alignment:
Q  151 aggtaagggtgagactatctctcaataat 179  Q
    |||||||||||||||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataat 10811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 11158148 - 11158104
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||| |||||||| ||| |||| |||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatt 11158104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 20805376 - 20805332
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatt 20805332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 1233 - 1155
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttggaaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  1233 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgcatagttttggaaa 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 50234 - 50156
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttggaaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgcatagttttggaaa 50156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 11850 - 11957
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttgg-aaataatatgaaaattagggtt 244  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||| ||||||  ||| | ||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttagggtt 11949  T
Q  245 tgatgatg 252  Q
    ||||||||    
T  11950 tgatgatg 11957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 111742 - 111662
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  111742 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 111662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 346 - 268
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttggaaa 225  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctgaaattgacctaattgcatagttttggaaa 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 30913 - 30835
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaa 30835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 1897 - 2005
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg--aaattgacctaattgaatggttttgg-aaataatatgaaaattagggt 243  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||| || ||||||| ||||||| |||   |||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 1996  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  1997 ttgatgatg 2005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 8574 - 8682
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg--aaattgacctaattgaatggttttgg-aaataatatgaaaattagggt 243  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||| || ||||||| ||||||| |||   |||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 8673  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  8674 ttgatgatg 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 111938 - 111830
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg--aaattgacctaattgaatggttttggaa-ataatatgaaaattagggt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||| || ||||||||| ||||  |||   |||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggttagggt 111839  T
Q  244 ttgatgatg 252  Q
    |||||||||    
T  111838 ttgatgatg 111830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 11397 - 11318
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaa 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 750 - 824
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 10194 - 10269
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  10194 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 10269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 11008 - 11096
Alignment:
Q  75 agagagagcaagagaaaaccaagaacaagggg-aaaacttaggagccga-ttgccgtgttaattcttcttacaa-tctaaggtaagggtg 161  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| ||||||||||||| || || |||||||||||||||    
T  11008 agagaaagcaagagaaaac-aagaacaagggggaaaacttaggagctgatttgctgtgttaattcttcctaaaattctaaggtaagggtg 11096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 220
Target Start/End: Original strand, 1524 - 1599
Alignment:
Q  147 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  1524 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 987 - 900
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctata-attctg-aaattgacctaattgaatggttttggaa-ataatatg 232  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| || || |||||| ||||||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataatatg 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 8132 - 8045
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctata-attctg-aaattgacctaattgaatggttttggaa-ataatatg 232  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| || || |||||| ||||||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataatatg 8045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 14398 - 14469
Alignment:
Q  151 aggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 220  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 14469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 18225 - 18160
Alignment:
Q  148 ctaaggtaagggtgagactatctctcaataatcataatctataattct--gaaattgacctaattg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattg 18160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 15989 - 16093
Alignment:
Q  75 agagagagcaagagaaaaccaagaacaagggg-aaaacttaggagccgatt-gccgtgttaattcttcttacaat-ctaaggtaagggtgagactatctc 171  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||||| |||| || ||||||||||||| |||||| |||||||||||||| || |||||     
T  15989 agagaaagcaagagaaa-ccaagaacaagggggaaaacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatctt 16087  T
Q  172 tcaata 177  Q
    ||||||    
T  16088 tcaata 16093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 17702 - 17654
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  17702 aatctaaggtaagggtgagactatctctcaataaccataatgtataatt 17654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 40528 - 40576
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  40528 aatctaaggtaagggtgagactatctctcaataatcatagtatataatt 40576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 135532 - 135484
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  135532 aatctaaggtaagggtgagactatctctcaataatcatagtatataatt 135484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 16875 - 16808
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 16808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 101928 - 101995
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt-ctg-aaattgacctaattgaat 214  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||||| ||||||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaat 101995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 116951 - 116884
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 116884  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  150 aaggtaagggtgagactatctctcaataatcata 183  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

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Target: scaffold0235 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 22589 - 22637
Alignment:
Q  145 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    |||| |||||||||||||||||||||||||||||||||| | |||||||    
T  22589 aatccaaggtaagggtgagactatctctcaataatcatagtatataatt 22637  T

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Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 8 - 75
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    |||||||||||||||||||||||||||||||| ||||  |||| ||||| ||||||| ||||||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaat 75  T

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Target: scaffold0146 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 13687 - 13620
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 214  Q
    |||||||||||||||||||||||||||||||| ||||  |||| ||||| ||||||| ||||||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaat 13620  T

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Target: scaffold0962 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 611 - 673
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 203  Q
    |||||||||||||||||||| ||| ||||||||||||||| | |||   ||||||||||||||    
T  611 caatctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattga 673  T

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Target: scaffold0124 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 34276 - 34320
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatt 34320  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 25516 - 25555
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcata 183  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  25516 caatctaaggtaagggtgaggctaactctcaataatcata 25555  T

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Target: scaffold0815 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 1504 - 1450
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattg 202  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||| |||||||||||    
T  1504 taaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaattg 1450  T

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Target: scaffold0679 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 1584 - 1638
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcat-aatctataattctgaaattg 202  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||||||||||||    
T  1584 taaggtaagggtgagactatcattcaatgatcttaaatctataattctgaaattg 1638  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 670 - 719
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||| |||||||||||||||||| |||||||| ||| |||| |||||||    
T  670 caatcaaaggtaagggtgagactaactctcaatgatcttaatgtataatt 719  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 183
Target Start/End: Complemental strand, 163389 - 163352
Alignment:
Q  146 atctaaggtaagggtgagactatctctcaataatcata 183  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  163389 atctaaggtaagggtgaggctaactctcaataatcata 163352  T

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Target: scaffold0413 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 11715 - 11683
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaat 176  Q
    |||||||||||||||||||||||| ||||||||    
T  11715 caatctaaggtaagggtgagactaactctcaat 11683  T

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Target: scaffold0317 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 1441 - 1397
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatt 1397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 14997 - 15041
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||||||| |||||||| ||| |||| |||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatt 15041  T

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Target: scaffold0138 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 12352 - 12308
Alignment:
Q  149 taaggtaagggtgagactatctctcaataatcataatctataatt 193  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatt 12308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 52057 - 52025
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaat 176  Q
    |||||||||||||||||||||||| ||||||||    
T  52057 caatctaaggtaagggtgagactaactctcaat 52025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 152106 - 152166
Alignment:
Q  144 caatctaaggtaagggtgagactatctctcaataatcataa-tctataattctgaaattga 203  Q
    |||||||||||||||||| |||||||  ||| ||||| ||| | |||||||||||||||||    
T  152106 caatctaaggtaagggtgggactatcattcagtaatcttaagtttataattctgaaattga 152166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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