View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0410_low_23 (Length: 291)

Name: NF0410_low_23
Description: NF0410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0410_low_23
NF0410_low_23
[»] chr7 (51 HSPs)
chr7 (62-220)||(9057971-9058127)
chr7 (60-220)||(21676368-21676528)
chr7 (56-220)||(4483399-4483563)
chr7 (56-220)||(28719126-28719289)
chr7 (56-220)||(9322395-9322559)
chr7 (56-220)||(8564909-8565073)
chr7 (58-220)||(10862191-10862351)
chr7 (56-220)||(13388637-13388798)
chr7 (78-220)||(19066285-19066428)
chr7 (56-220)||(13376343-13376500)
chr7 (62-220)||(13273412-13273566)
chr7 (56-199)||(13617518-13617657)
chr7 (99-220)||(49049177-49049296)
chr7 (56-118)||(45148359-45148421)
chr7 (99-220)||(15629440-15629559)
chr7 (56-118)||(16382327-16382389)
chr7 (169-220)||(4069875-4069926)
chr7 (99-166)||(11285932-11285999)
chr7 (99-165)||(12753603-12753669)
chr7 (100-161)||(15913817-15913878)
chr7 (99-166)||(12249489-12249556)
chr7 (56-118)||(4437651-4437712)
chr7 (56-134)||(20584215-20584292)
chr7 (56-131)||(21539507-21539582)
chr7 (169-220)||(3193490-3193541)
chr7 (59-118)||(4445052-4445110)
chr7 (169-220)||(15979525-15979576)
chr7 (181-220)||(13463066-13463105)
chr7 (99-166)||(16571466-16571535)
chr7 (99-166)||(16594127-16594196)
chr7 (56-118)||(17225251-17225312)
chr7 (146-220)||(20587033-20587105)
chr7 (56-118)||(33558491-33558552)
chr7 (56-118)||(14939573-14939634)
chr7 (56-118)||(15367166-15367227)
chr7 (99-157)||(15823786-15823844)
chr7 (178-220)||(16382227-16382269)
chr7 (56-118)||(16921260-16921321)
chr7 (56-118)||(31500008-31500069)
chr7 (56-118)||(48354136-48354197)
chr7 (99-166)||(45453632-45453700)
chr7 (99-166)||(142348-142415)
chr7 (99-158)||(2192072-2192131)
chr7 (99-158)||(7291582-7291641)
chr7 (178-220)||(16207109-16207151)
chr7 (56-118)||(16918368-16918429)
chr7 (78-112)||(17910748-17910782)
chr7 (99-157)||(26010567-26010624)
chr7 (56-118)||(34242448-34242509)
chr7 (81-118)||(3193397-3193434)
chr7 (60-131)||(13463159-13463230)
[»] chr3 (64 HSPs)
chr3 (56-220)||(38812325-38812487)
chr3 (56-220)||(5229408-5229572)
chr3 (56-220)||(33370196-33370358)
chr3 (56-220)||(38377144-38377310)
chr3 (56-220)||(41660284-41660446)
chr3 (68-219)||(12490078-12490227)
chr3 (56-220)||(12951719-12951880)
chr3 (68-219)||(48420342-48420492)
chr3 (82-220)||(47983567-47983704)
chr3 (82-220)||(47992854-47992991)
chr3 (82-220)||(48002141-48002278)
chr3 (82-220)||(48011427-48011564)
chr3 (56-220)||(39654583-39654742)
chr3 (56-220)||(15516402-15516563)
chr3 (59-220)||(11330345-11330499)
chr3 (93-220)||(9592119-9592245)
chr3 (67-218)||(15874836-15874982)
chr3 (62-220)||(11883604-11883759)
chr3 (146-220)||(15989649-15989723)
chr3 (56-166)||(14060575-14060684)
chr3 (99-220)||(12562851-12562971)
chr3 (99-220)||(14294095-14294214)
chr3 (99-220)||(14299722-14299841)
chr3 (99-166)||(11198945-11199012)
chr3 (169-220)||(17392014-17392065)
chr3 (100-166)||(11062410-11062476)
chr3 (56-118)||(17759771-17759832)
chr3 (56-118)||(19061091-19061152)
chr3 (99-220)||(14522680-14522799)
chr3 (99-166)||(40938449-40938516)
chr3 (56-118)||(21168057-21168118)
chr3 (56-118)||(25105295-25105356)
chr3 (56-114)||(27050518-27050575)
chr3 (82-220)||(11401242-11401384)
chr3 (99-220)||(17138133-17138252)
chr3 (99-166)||(14297216-14297283)
chr3 (99-166)||(14302843-14302910)
chr3 (99-166)||(35122405-35122472)
chr3 (56-118)||(17319913-17319974)
chr3 (82-166)||(55442130-55442215)
chr3 (56-118)||(43428871-43428932)
chr3 (61-117)||(17385638-17385693)
chr3 (176-220)||(17759888-17759932)
chr3 (99-166)||(53899894-53899961)
chr3 (56-118)||(8603469-8603530)
chr3 (56-118)||(17203457-17203518)
chr3 (56-118)||(18968890-18968951)
chr3 (56-118)||(34558662-34558723)
chr3 (56-118)||(17392122-17392185)
chr3 (99-166)||(8630565-8630632)
chr3 (99-166)||(17099432-17099499)
chr3 (99-166)||(17523782-17523849)
chr3 (99-158)||(17913624-17913683)
chr3 (99-166)||(19230778-19230845)
chr3 (99-166)||(19572144-19572211)
chr3 (185-220)||(27050408-27050443)
chr3 (99-158)||(47786256-47786315)
chr3 (56-118)||(4163520-4163581)
chr3 (56-118)||(6229969-6230030)
chr3 (99-157)||(13816240-13816298)
chr3 (56-114)||(14817032-14817089)
chr3 (178-220)||(19061210-19061252)
chr3 (66-111)||(10711355-10711399)
chr3 (180-220)||(17320039-17320079)
[»] chr2 (43 HSPs)
chr2 (56-220)||(19434802-19434964)
chr2 (56-220)||(43641496-43641658)
chr2 (56-220)||(18534499-18534662)
chr2 (56-220)||(24276556-24276718)
chr2 (61-220)||(24562208-24562368)
chr2 (56-220)||(25304238-25304399)
chr2 (56-220)||(23824799-23824957)
chr2 (62-220)||(721138-721293)
chr2 (56-220)||(19670476-19670635)
chr2 (63-216)||(22137166-22137316)
chr2 (56-220)||(23822855-23823013)
chr2 (56-220)||(23831934-23832092)
chr2 (56-220)||(4624-4781)
chr2 (56-220)||(24295919-24296077)
chr2 (56-165)||(24088710-24088818)
chr2 (82-220)||(19658619-19658753)
chr2 (56-118)||(6093621-6093683)
chr2 (62-220)||(45619375-45619537)
chr2 (56-164)||(22787369-22787476)
chr2 (99-220)||(24572765-24572884)
chr2 (99-166)||(7320207-7320274)
chr2 (99-220)||(22581307-22581426)
chr2 (66-118)||(19665435-19665487)
chr2 (99-166)||(22691324-22691391)
chr2 (99-166)||(22695971-22696038)
chr2 (56-118)||(20272171-20272233)
chr2 (99-166)||(269906-269973)
chr2 (82-118)||(25132982-25133018)
chr2 (99-166)||(4449603-4449670)
chr2 (99-158)||(25600688-25600747)
chr2 (99-166)||(27260302-27260369)
chr2 (68-141)||(66278-66350)
chr2 (176-220)||(6093521-6093565)
chr2 (82-118)||(24342740-24342776)
chr2 (78-114)||(24881406-24881442)
chr2 (99-158)||(15632123-15632182)
chr2 (99-166)||(36892083-36892150)
chr2 (99-157)||(24827941-24827998)
chr2 (99-157)||(24967025-24967083)
chr2 (116-166)||(28972760-28972810)
chr2 (60-118)||(40641631-40641688)
chr2 (62-111)||(23154174-23154222)
chr2 (62-111)||(23565431-23565479)
[»] chr1 (32 HSPs)
chr1 (56-220)||(37235294-37235456)
chr1 (62-220)||(21193838-21193994)
chr1 (56-220)||(8539285-8539447)
chr1 (56-220)||(8604524-8604686)
chr1 (60-220)||(20821625-20821785)
chr1 (56-220)||(5471716-5471878)
chr1 (58-220)||(77365-77527)
chr1 (56-220)||(5769545-5769709)
chr1 (59-219)||(41213001-41213161)
chr1 (64-220)||(22144734-22144887)
chr1 (56-201)||(22836586-22836729)
chr1 (56-220)||(13378095-13378256)
chr1 (56-220)||(38034958-38035116)
chr1 (56-220)||(20956303-20956463)
chr1 (56-220)||(51657662-51657821)
chr1 (56-220)||(36357674-36357832)
chr1 (82-220)||(19601852-19601986)
chr1 (56-198)||(27673540-27673680)
chr1 (54-118)||(33396115-33396179)
chr1 (99-166)||(35523799-35523866)
chr1 (56-118)||(49998653-49998714)
chr1 (100-166)||(21716923-21716989)
chr1 (56-118)||(46144570-46144631)
chr1 (99-166)||(35053559-35053626)
chr1 (56-118)||(17022350-17022411)
chr1 (56-118)||(17607731-17607792)
chr1 (56-118)||(40437607-40437668)
chr1 (176-220)||(33396015-33396059)
chr1 (99-166)||(5675980-5676047)
chr1 (99-166)||(22407574-22407641)
chr1 (99-157)||(49966375-49966433)
chr1 (78-114)||(52399425-52399461)
[»] chr8 (51 HSPs)
chr8 (56-220)||(25756624-25756786)
chr8 (56-220)||(45560549-45560712)
chr8 (56-220)||(18042892-18043056)
chr8 (56-220)||(11543184-11543348)
chr8 (56-220)||(37654979-37655140)
chr8 (56-220)||(25294635-25294803)
chr8 (56-220)||(24238213-24238379)
chr8 (56-213)||(22312346-22312503)
chr8 (56-220)||(33170931-33171095)
chr8 (56-220)||(22498632-22498797)
chr8 (54-220)||(23116148-23116314)
chr8 (56-221)||(33612393-33612556)
chr8 (56-220)||(23148562-23148724)
chr8 (56-220)||(21199508-21199667)
chr8 (82-220)||(23835889-23836025)
chr8 (56-220)||(39448159-39448316)
chr8 (56-220)||(21192081-21192240)
chr8 (82-220)||(31195644-31195778)
chr8 (82-201)||(18768121-18768239)
chr8 (54-118)||(25608803-25608867)
chr8 (62-201)||(22737217-22737355)
chr8 (56-118)||(17265672-17265734)
chr8 (99-220)||(38532317-38532436)
chr8 (56-118)||(19332961-19333023)
chr8 (99-164)||(21696283-21696348)
chr8 (99-220)||(17730837-17730955)
chr8 (99-163)||(28543659-28543723)
chr8 (99-166)||(20568639-20568706)
chr8 (99-166)||(20574832-20574899)
chr8 (99-166)||(20655396-20655463)
chr8 (56-118)||(7469048-7469109)
chr8 (56-118)||(24266801-24266862)
chr8 (99-166)||(20648811-20648878)
chr8 (99-166)||(21679922-21679989)
chr8 (99-166)||(25121262-25121329)
chr8 (56-118)||(24553910-24553971)
chr8 (61-118)||(23227360-23227417)
chr8 (78-134)||(29296678-29296735)
chr8 (56-118)||(15932120-15932181)
chr8 (56-118)||(38637000-38637061)
chr8 (179-220)||(17265572-17265613)
chr8 (176-220)||(19333079-19333123)
chr8 (99-166)||(16416980-16417047)
chr8 (99-158)||(22908856-22908915)
chr8 (99-166)||(37605712-37605779)
chr8 (99-166)||(37610086-37610153)
chr8 (56-118)||(17284051-17284112)
chr8 (99-157)||(24718789-24718847)
chr8 (180-220)||(7468941-7468981)
chr8 (184-220)||(23153267-23153303)
chr8 (180-220)||(24554038-24554078)
[»] chr4 (41 HSPs)
chr4 (56-220)||(41257686-41257848)
chr4 (56-220)||(19558002-19558167)
chr4 (56-220)||(54364904-54365069)
chr4 (56-220)||(5372029-5372193)
chr4 (56-220)||(24237560-24237723)
chr4 (60-220)||(47469672-47469832)
chr4 (56-220)||(49070496-49070662)
chr4 (63-220)||(14900149-14900300)
chr4 (56-220)||(15043607-15043768)
chr4 (56-220)||(15110656-15110817)
chr4 (56-219)||(50223494-50223656)
chr4 (56-220)||(41167275-41167433)
chr4 (68-201)||(43282730-43282861)
chr4 (56-220)||(15852657-15852815)
chr4 (56-220)||(12245591-12245751)
chr4 (62-218)||(52266807-52266960)
chr4 (61-220)||(17213183-17213342)
chr4 (82-220)||(34197530-34197664)
chr4 (82-220)||(37958422-37958556)
chr4 (56-163)||(27959753-27959859)
chr4 (124-220)||(17376882-17376978)
chr4 (146-220)||(10238857-10238932)
chr4 (99-220)||(13811003-13811122)
chr4 (99-166)||(18495780-18495847)
chr4 (99-166)||(44054640-44054707)
chr4 (56-118)||(10238787-10238848)
chr4 (56-117)||(7187246-7187307)
chr4 (56-118)||(18275611-18275672)
chr4 (99-166)||(21960941-21961008)
chr4 (79-118)||(42707549-42707588)
chr4 (56-118)||(12732947-12733008)
chr4 (56-118)||(38763576-38763637)
chr4 (62-111)||(10115705-10115753)
chr4 (62-111)||(11923440-11923488)
chr4 (82-118)||(10105523-10105559)
chr4 (82-118)||(15676248-15676284)
chr4 (82-118)||(31114571-31114607)
chr4 (99-166)||(53706163-53706230)
chr4 (99-166)||(53909143-53909210)
chr4 (66-111)||(13933541-13933585)
chr4 (99-155)||(30233917-30233973)
[»] chr5 (39 HSPs)
chr5 (56-219)||(24226800-24226961)
chr5 (56-220)||(11964621-11964785)
chr5 (56-220)||(20455428-20455592)
chr5 (56-220)||(19860906-19861067)
chr5 (56-220)||(21615685-21615846)
chr5 (56-220)||(37189461-37189623)
chr5 (68-207)||(431111-431248)
chr5 (62-220)||(3672661-3672816)
chr5 (56-220)||(5452148-5452309)
chr5 (82-220)||(32967533-32967667)
chr5 (56-199)||(23413918-23414057)
chr5 (56-220)||(23492676-23492833)
chr5 (82-220)||(13793803-13793939)
chr5 (56-118)||(21108325-21108387)
chr5 (68-165)||(28888641-28888737)
chr5 (82-166)||(7727299-7727383)
chr5 (56-146)||(37982171-37982260)
chr5 (99-166)||(23453671-23453738)
chr5 (99-166)||(23465176-23465243)
chr5 (56-118)||(5622770-5622831)
chr5 (99-166)||(19404301-19404368)
chr5 (99-166)||(24184586-24184653)
chr5 (56-118)||(6455474-6455535)
chr5 (56-118)||(24082910-24082971)
chr5 (50-118)||(14343091-14343158)
chr5 (99-166)||(11338240-11338306)
chr5 (56-118)||(26561128-26561189)
chr5 (56-118)||(29912853-29912914)
chr5 (99-166)||(11582595-11582662)
chr5 (56-115)||(33627725-33627783)
chr5 (56-118)||(21224043-21224104)
chr5 (66-111)||(24851809-24851853)
chr5 (176-220)||(21108226-21108270)
chr5 (82-118)||(22055125-22055161)
chr5 (99-157)||(19498529-19498586)
chr5 (82-118)||(18532161-18532197)
chr5 (180-220)||(26561250-26561290)
chr5 (99-163)||(27185207-27185271)
chr5 (113-145)||(37982144-37982176)
[»] scaffold0080 (1 HSPs)
scaffold0080 (56-220)||(24945-25107)
[»] scaffold0022 (3 HSPs)
scaffold0022 (56-220)||(130558-130720)
scaffold0022 (56-166)||(106258-106367)
scaffold0022 (56-220)||(108319-108479)
[»] scaffold0004 (2 HSPs)
scaffold0004 (56-220)||(85091-85253)
scaffold0004 (58-217)||(26232-26389)
[»] chr6 (48 HSPs)
chr6 (56-220)||(21930567-21930731)
chr6 (56-220)||(16134953-16135118)
chr6 (56-216)||(22846807-22846965)
chr6 (54-220)||(23220371-23220537)
chr6 (56-197)||(34965604-34965744)
chr6 (77-206)||(18104826-18104955)
chr6 (56-220)||(15738921-15739082)
chr6 (56-220)||(16889083-16889242)
chr6 (62-220)||(18383025-18383179)
chr6 (56-201)||(25368690-25368833)
chr6 (56-220)||(16375054-16375222)
chr6 (54-220)||(28196112-28196274)
chr6 (82-166)||(33323535-33323619)
chr6 (82-166)||(35137312-35137396)
chr6 (56-220)||(31162220-31162386)
chr6 (56-118)||(11374187-11374249)
chr6 (56-117)||(19852973-19853033)
chr6 (56-118)||(29161846-29161908)
chr6 (56-117)||(5485667-5485727)
chr6 (169-220)||(17857836-17857887)
chr6 (99-166)||(22866892-22866959)
chr6 (54-118)||(18630948-18631011)
chr6 (56-118)||(32350877-32350938)
chr6 (99-166)||(32897447-32897514)
chr6 (56-118)||(25649946-25650007)
chr6 (56-117)||(4228620-4228680)
chr6 (78-118)||(22463467-22463507)
chr6 (99-158)||(16084148-16084207)
chr6 (99-158)||(16105290-16105349)
chr6 (99-166)||(18775934-18776001)
chr6 (99-166)||(31627162-31627229)
chr6 (99-157)||(13622487-13622545)
chr6 (56-117)||(4173011-4173071)
chr6 (176-220)||(29161964-29162008)
chr6 (79-114)||(17857741-17857776)
chr6 (99-166)||(18431357-18431424)
chr6 (99-166)||(18569310-18569377)
chr6 (185-220)||(19852944-19852979)
chr6 (99-166)||(35017055-35017122)
chr6 (86-116)||(15006013-15006043)
chr6 (99-157)||(15736554-15736612)
chr6 (99-157)||(18004346-18004404)
chr6 (56-118)||(29604356-29604417)
chr6 (183-220)||(32350770-32350807)
chr6 (176-220)||(5485792-5485836)
chr6 (176-220)||(11374305-11374349)
chr6 (79-111)||(14874841-14874873)
chr6 (50-118)||(25918471-25918538)
[»] scaffold0183 (1 HSPs)
scaffold0183 (56-220)||(9454-9620)
[»] scaffold0088 (1 HSPs)
scaffold0088 (56-220)||(44942-45107)
[»] scaffold0346 (1 HSPs)
scaffold0346 (56-220)||(13947-14107)
[»] scaffold0243 (1 HSPs)
scaffold0243 (68-220)||(3640-3790)
[»] scaffold0601 (1 HSPs)
scaffold0601 (56-216)||(2309-2469)
[»] scaffold0049 (1 HSPs)
scaffold0049 (56-220)||(34794-34958)
[»] scaffold0053 (1 HSPs)
scaffold0053 (56-220)||(78166-78328)
[»] scaffold0013 (3 HSPs)
scaffold0013 (56-218)||(34144-34303)
scaffold0013 (56-118)||(10688-10750)
scaffold0013 (172-220)||(10811-10859)
[»] scaffold0786 (2 HSPs)
scaffold0786 (56-220)||(360-521)
scaffold0786 (56-220)||(5415-5576)
[»] scaffold0390 (1 HSPs)
scaffold0390 (56-220)||(3948-4109)
[»] scaffold0016 (1 HSPs)
scaffold0016 (68-220)||(117950-118100)
[»] scaffold0057 (1 HSPs)
scaffold0057 (56-220)||(4613-4779)
[»] scaffold0090 (1 HSPs)
scaffold0090 (56-201)||(5979-6122)
[»] scaffold0028 (1 HSPs)
scaffold0028 (56-220)||(78351-78510)
[»] scaffold0521 (1 HSPs)
scaffold0521 (56-219)||(7267-7427)
[»] scaffold0095 (1 HSPs)
scaffold0095 (56-220)||(7002-7159)
[»] scaffold0327 (2 HSPs)
scaffold0327 (56-220)||(4700-4859)
scaffold0327 (56-118)||(3299-3360)
[»] scaffold0150 (2 HSPs)
scaffold0150 (56-220)||(20367-20527)
scaffold0150 (56-220)||(27196-27356)
[»] scaffold0507 (1 HSPs)
scaffold0507 (68-220)||(4701-4848)
[»] scaffold0138 (1 HSPs)
scaffold0138 (56-220)||(23762-23921)
[»] scaffold0017 (1 HSPs)
scaffold0017 (56-118)||(11390-11452)
[»] scaffold0193 (1 HSPs)
scaffold0193 (56-151)||(3450-3544)
[»] scaffold0195 (2 HSPs)
scaffold0195 (99-166)||(8028-8095)
scaffold0195 (99-166)||(13417-13484)
[»] scaffold0808 (1 HSPs)
scaffold0808 (99-220)||(2842-2961)
[»] scaffold0589 (1 HSPs)
scaffold0589 (56-220)||(6551-6711)
[»] scaffold0058 (1 HSPs)
scaffold0058 (82-166)||(71641-71725)
[»] scaffold0610 (1 HSPs)
scaffold0610 (99-166)||(2000-2067)
[»] scaffold0031 (3 HSPs)
scaffold0031 (99-166)||(30796-30863)
scaffold0031 (99-158)||(69494-69553)
scaffold0031 (56-118)||(98497-98558)
[»] scaffold0079 (1 HSPs)
scaffold0079 (56-106)||(5530-5580)
[»] scaffold0021 (4 HSPs)
scaffold0021 (99-220)||(10333-10452)
scaffold0021 (56-118)||(19109-19170)
scaffold0021 (56-118)||(23374-23435)
scaffold0021 (56-118)||(28685-28746)
[»] scaffold0112 (1 HSPs)
scaffold0112 (56-220)||(12384-12552)
[»] scaffold0009 (3 HSPs)
scaffold0009 (169-220)||(255872-255923)
scaffold0009 (62-118)||(255761-255816)
scaffold0009 (56-118)||(68286-68347)
[»] scaffold0151 (1 HSPs)
scaffold0151 (56-130)||(23807-23880)
[»] scaffold1957 (1 HSPs)
scaffold1957 (57-118)||(1132-1192)
[»] scaffold0750 (1 HSPs)
scaffold0750 (101-166)||(6712-6777)
[»] scaffold0317 (2 HSPs)
scaffold0317 (56-117)||(15223-15284)
scaffold0317 (171-220)||(15344-15393)
[»] scaffold0468 (2 HSPs)
scaffold0468 (169-220)||(12449-12500)
scaffold0468 (62-117)||(12339-12393)
[»] scaffold0190 (1 HSPs)
scaffold0190 (99-166)||(8799-8866)
[»] scaffold0103 (1 HSPs)
scaffold0103 (99-166)||(32303-32370)
[»] scaffold0092 (1 HSPs)
scaffold0092 (113-220)||(2087-2192)
[»] scaffold0387 (1 HSPs)
scaffold0387 (56-118)||(2295-2356)
[»] scaffold0174 (3 HSPs)
scaffold0174 (56-118)||(1381-1442)
scaffold0174 (171-216)||(21535-21580)
scaffold0174 (54-117)||(21413-21475)
[»] scaffold1204 (2 HSPs)
scaffold1204 (62-118)||(1554-1610)
scaffold1204 (176-220)||(1666-1710)
[»] scaffold0032 (1 HSPs)
scaffold0032 (62-118)||(105948-106004)
[»] scaffold0462 (1 HSPs)
scaffold0462 (99-166)||(4850-4917)
[»] scaffold0434 (1 HSPs)
scaffold0434 (99-166)||(3380-3447)
[»] scaffold0001 (1 HSPs)
scaffold0001 (99-166)||(71826-71893)
[»] scaffold1278 (1 HSPs)
scaffold1278 (56-118)||(353-414)
[»] scaffold0456 (1 HSPs)
scaffold0456 (68-146)||(12936-13013)
[»] scaffold0107 (1 HSPs)
scaffold0107 (56-118)||(12232-12293)
[»] scaffold0447 (1 HSPs)
scaffold0447 (99-166)||(3345-3412)
[»] scaffold0383 (1 HSPs)
scaffold0383 (99-166)||(5953-6020)
[»] scaffold0338 (1 HSPs)
scaffold0338 (99-166)||(7513-7580)
[»] scaffold0357 (1 HSPs)
scaffold0357 (56-118)||(6534-6595)
[»] scaffold0342 (1 HSPs)
scaffold0342 (100-166)||(4562-4628)
[»] scaffold0025 (1 HSPs)
scaffold0025 (56-118)||(52090-52151)
[»] scaffold0014 (1 HSPs)
scaffold0014 (99-166)||(145649-145718)
[»] scaffold0010 (1 HSPs)
scaffold0010 (56-118)||(29890-29951)
[»] scaffold0006 (1 HSPs)
scaffold0006 (56-118)||(198695-198756)
[»] scaffold0240 (1 HSPs)
scaffold0240 (99-166)||(6267-6334)
[»] scaffold0083 (1 HSPs)
scaffold0083 (99-166)||(12918-12985)
[»] scaffold0008 (1 HSPs)
scaffold0008 (99-134)||(21411-21446)
[»] scaffold0761 (1 HSPs)
scaffold0761 (99-157)||(3066-3123)
[»] scaffold0395 (1 HSPs)
scaffold0395 (99-157)||(14408-14466)
[»] scaffold0047 (1 HSPs)
scaffold0047 (56-118)||(1412-1473)
[»] scaffold0184 (1 HSPs)
scaffold0184 (99-156)||(34081-34138)
[»] scaffold0078 (1 HSPs)
scaffold0078 (99-156)||(38706-38763)
[»] scaffold0044 (1 HSPs)
scaffold0044 (99-156)||(95051-95108)


Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 220
Target Start/End: Original strand, 9057971 - 9058127
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9057971 ttgaattatgacttgaatg-ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 9058069  T
Q  162 gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9058070 g-aaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 9058127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 60 - 220
Target Start/End: Original strand, 21676368 - 21676528
Alignment:
Q  60 aattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgtt 159  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||  || | ||| ||||||||||||||    
T  21676368 aattgatttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatattgtt 21676467  T
Q  160 gtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||  || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21676468 gttgaatattatgaggtgattttacattgtcgagtctttgcttgtatgtccatgcatcata 21676528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 4483563 - 4483399
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||  | ||| ||||||||||    
T  4483563 tcttaattgatttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataatttgaggttatcctttatat 4483464  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    || |||  || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  4483463 tgctgttgaatattatgaggtgatgttgtattgtcgagtctttgcttgtatgtccatgcatcata 4483399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 28719289 - 28719126
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||| | ||  ||| ||||||||||    
T  28719289 tcttaattgatttatgacttgattgattgtgtggatgtaaatacttgataatgcaaatgttgttgaggtgatcaatataatggag-gttatcctttatat 28719191  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28719190 tgttgttgaatattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 28719126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 9322395 - 9322559
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||  || | ||| ||||||||||    
T  9322395 tcttaattgaattatgacttgattg-ttgtatggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatat 9322493  T
Q  156 tgttgt-gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9322494 tgttgttgaatatttatgaggtgattttgcattgtcgagtctttacttgtatgtccatgcatcata 9322559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 8564909 - 8565073
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  || ||||||||  || | ||| ||||||||||    
T  8564909 tcttaattgatttatgacttgattgattgtttggacgtaaatacttgataatgcaattgttgttgaagtggtcaatataaatggaggttatcctttatat 8565008  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || |||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||    
T  8565009 tgttgttgaatattatgaggtaattttgcattgtcgactctttgcttgtatgttcatggatcata 8565073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 58 - 220
Target Start/End: Original strand, 10862191 - 10862351
Alignment:
Q  58 ttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  10862191 ttaattgaattatgacttgatcg-ttgtgtggacgtaaacacttggtaatgcaattgttgtggagatgatcaatgtatttggaagttgtcctctatattg 10862289  T
Q  158 ttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | ||||||| || ||||||||| | ||||| |||||| ||||| |  ||||||||||||||||    
T  10862290 tggtgaaaatttgtgaggtgatgtcgcattatcgagtatttgc-tacatgtccatgcatcata 10862351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 13388798 - 13388637
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||| |||||| |||| || |||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||| ||  ||||||||||||    
T  13388798 tcttatttgatttatgatttgaatg-ttgtgtggacgtaattacttaataatgtaattgttgaggagatgatcaatatatttggaatatgtcctttatat 13388700  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| ||| ||  ||||||| |||||||||| ||||| || |||||||||||||||||||||    
T  13388699 tgttgtg-aaagtttggaggtga-tttgcattgttgagtccttacttgtatgtccatgcatcata 13388637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 78 - 220
Target Start/End: Complemental strand, 19066428 - 19066285
Alignment:
Q  78 ttgattgtgtggacgtaaatacttgataatgcaattgttgtgga-gatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaat-tatgagg 175  Q
    ||||||||||||| ||||||||||||||||||||||||||| || | || ||||||||  || | ||| ||||||||||||||||  ||| | ||| |||    
T  19066428 ttgattgtgtggatgtaaatacttgataatgcaattgttgttgaagttgttcaatataaatggaggttatcctttatattgttgttgaaagtatatcagg 19066329  T
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  19066328 tgattt-gcattgtcgagtctttgcttgtatgtccatgcatcata 19066285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 13376500 - 13376343
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || |||||||||||||| | ||||||||||||| |||||||||||||||||||||| ||| ||||| || |||||||    
T  13376500 tcttatttgaattatgacttgaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatata-ttggaagttatcatttatat 13376403  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||     ||||||||  ||||||||| ||||| || |||| ||||||||||||||||    
T  13376402 tgttgtgaaa---gttgaggtga--ttgcattgttgagtccttacttgcatgtccatgcatcata 13376343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 62 - 220
Target Start/End: Complemental strand, 13273566 - 13273412
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    ||||||||||| |||||||  ||| ||||| | | | |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||    
T  13273566 ttgaattatgaattgattg--tgtatggacatgatttcttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgtggt 13273469  T
Q  162 gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | ||| || ||| || || | ||||| ||||||||||| || |||||||||||||||||    
T  13273468 g-aaagttgtgaagtaatgtcgcattatcgagtctttg-ttatatgtccatgcatcata 13273412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 199
Target Start/End: Complemental strand, 13617657 - 13617518
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||| ||| |||||||||||  || | | | ||||||||||    
T  13617657 tcttaattgaattatgacttgattgattgtgtggacataaatac---ataatgcaattgttgttgaggtgatcaatataaatggaggctatcctttatat 13617561  T
Q  156 tg-ttgtgaaaaattatgaggtgattttgcattgtcgagtctttg 199  Q
    || || |||| | |||||||  |||||||||||||||||||||||    
T  13617560 tgtttttgaatatttatgag--gattttgcattgtcgagtctttg 13617518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 49049177 - 49049296
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||  ||||| |||| |||| | ||||| ||||||||||    
T  49049177 cttgataatgcaattgtggtggagatgatcaacatatttgaaagttgtcctttatattgtggtg-gaaattgtgagttgatgtcgcattatcgagtcttt 49049275  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||||||||||||||    
T  49049276 g-ttacatgtccatgcatcata 49049296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 45148421 - 45148359
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45148421 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatacaattgttgt 45148359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 15629559 - 15629440
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| |||||| ||| ||||  | ||||| ||||||||||    
T  15629559 cttgataatacaattgttgtggaaatgatcaatatatttgaaagttgtcctctatattgtggtg-aaaattgtgaagtgacgtcgcattatcgagtcttt 15629461  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||||||||||||||    
T  15629460 g-ttacatgtccatgcatcata 15629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 16382389 - 16382327
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  16382389 tcttaattgaattatgacttaattgattgtgtggacgtaaatatttgataatgcaattgttgt 16382327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 4069875 - 4069926
Alignment:
Q  169 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4069875 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 4069926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 11285999 - 11285932
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  11285999 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttctcctttatattgtggtgaaaa 11285932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 12753669 - 12753603
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaa 165  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  12753669 cttgataatgcaaatgttgtggagatgatcaatatatttggaagatgtcctttatattgtggtgaaa 12753603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 15913817 - 15913878
Alignment:
Q  100 ttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  15913817 ttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcatttatattgttgt 15913878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 12249489 - 12249556
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||| |||||||    
T  12249489 cttgataatgcaaatgttgtggagatgatcaatatatttggtagttgtcctctatattgtggtgaaaa 12249556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 4437712 - 4437651
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  4437712 tcttaattgaataatgacatg-ttgattgtgtggacgtaaatacttgataatgcaattgttgt 4437651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 20584215 - 20584292
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatata 134  Q
    |||||||  ||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  20584215 tcttaatgaaatcatgacttgattg-ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtaatcaatata 20584292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 21539507 - 21539582
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg-tggagatgatcaat 131  Q
    ||||| || |||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  21539507 tcttatttaaattgtgacttg-ttgattgtgtggacgtaaatacttgataatgcaattgttgttggagttgatcaat 21539582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 3193490 - 3193541
Alignment:
Q  169 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  3193490 tatgaggtgatgttgcattgtcgagtctttgcttgcatgtccatgcatcata 3193541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 4445110 - 4445052
Alignment:
Q  59 taattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  4445110 taattgaataatgacatg-ttgattgtgtggacgtaaatacttgataatgcaattgttgt 4445052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 15979525 - 15979576
Alignment:
Q  169 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  15979525 tatgaggtgattttgcattgtcgggtctttgctcgtatgtccatgcatcata 15979576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 13463105 - 13463066
Alignment:
Q  181 ttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13463105 ttgcattgtcgagtctttgcttgtatgtccatgcatcata 13463066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 16571466 - 16571535
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatca--atatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||| ||||||||||  |||||| ||||||||||||| |||||||| |||||||    
T  16571466 cttgataatgcaaatgttgttgagatgatcaatatatatatgaaagttgtcctctatattgtggtgaaaa 16571535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 16594196 - 16594127
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaat--atatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||| ||||||||||||  |||| ||||||||||||| |||||||| |||||||    
T  16594196 cttgataatgcaaatgttgttgagatgatcaatatatatatgaaagttgtcctctatattgtggtgaaaa 16594127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 17225251 - 17225312
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||||    
T  17225251 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgcttgataatgcaattgttgt 17225312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 20587033 - 20587105
Alignment:
Q  146 tcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||| ||||| | |||||| ||||||||| ||||||||||| |||||| |||||||||||||||||    
T  20587033 tcctttatattgt-gtgaata-ttatgaagtgattttgaattgtcgagtcattgcttatatgtccatgcatcata 20587105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 33558552 - 33558491
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| | ||| | |||||||||||||| |||||||||||||||||||||||||||    
T  33558552 tcttaattgaataacgacat-attgattgtgtggatgtaaatacttgataatgcaattgttgt 33558491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 14939634 - 14939573
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||||||||| || |||||| ||||||||||||||||||||    
T  14939634 tcttaattgaataatgacatg-ttgattgtgttgatgtaaatgcttgataatgcaattgttgt 14939573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 15367227 - 15367166
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||||||||| || |||||| ||||||||||||||||||||    
T  15367227 tcttaattgaataatgacatg-ttgattgtgttgatgtaaatgcttgataatgcaattgttgt 15367166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 15823786 - 15823844
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||| |||||||||||| ||||||||| |||   ||||||||||||||||    
T  15823786 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctttatattg 15823844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 16382269 - 16382227
Alignment:
Q  178 attttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  16382269 attttgcattattgagtctttgcttgtatgtccatgcatcata 16382227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 16921260 - 16921321
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||| ||||||| |||||| ||||||||||||||||||||    
T  16921260 tcttaattgaataatgacatg-ttgatagtgtggatgtaaatgcttgataatgcaattgttgt 16921321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 31500069 - 31500008
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||||||  |||| || ||||||||||||| |||||||||||||||| ||||||||||    
T  31500069 tcttaattgaatattgacatg-ttgattgtgtggaggtaaatacttgataatacaattgttgt 31500008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 48354197 - 48354136
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||| |||||||||||| |||||||    
T  48354197 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgcttgataatgcagttgttgt 48354136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 45453632 - 45453700
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatat-atttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||| |||||| ||| | |||||||||| |||||||| |||||||    
T  45453632 cttgataatgcaaatgatgtggagatgaacaatataattgggaagttgtcctatatattgtggtgaaaa 45453700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 142415 - 142348
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  142415 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 142348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 2192072 - 2192131
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| ||||||||    
T  2192072 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgt 2192131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 7291641 - 7291582
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| ||||||||    
T  7291641 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgt 7291582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 16207151 - 16207109
Alignment:
Q  178 attttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||    
T  16207151 attttgcattgttgagtctttgcttgtatgtctatgtatcata 16207109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 16918429 - 16918368
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| |  ||| ||||||||| |||||| ||||||||||||||||||||    
T  16918429 tcttaattgaataatgacatt-ttgtttgtgtggatgtaaatgcttgataatgcaattgttgt 16918368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 112
Target Start/End: Complemental strand, 17910782 - 17910748
Alignment:
Q  78 ttgattgtgtggacgtaaatacttgataatgcaat 112  Q
    ||||||||||||| |||||||||||||||||||||    
T  17910782 ttgattgtgtggatgtaaatacttgataatgcaat 17910748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 26010567 - 26010624
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    |||||||||||||| ||||||||||||||||||||| |||   |||||||| |||||||    
T  26010567 cttgataatgcaat-gttgtggagatgatcaatataattgggtgttgtcctatatattg 26010624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 34242448 - 34242509
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||| |||||| ||||| || || |||||||||| |||||| ||||||||||||||||||||    
T  34242448 tcttatttgaataatgacatg-ttaattgtgtggatgtaaatgcttgataatgcaattgttgt 34242509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 3193397 - 3193434
Alignment:
Q  81 attgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  3193397 attgtgtggacataaatacttaataatgcaattgttgt 3193434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 13463230 - 13463159
Alignment:
Q  60 aattgaattatgacttgattgattgtgtggacgtaaatacttgat-aatgcaattgttgtggagatgatcaat 131  Q
    ||||||||| ||||||||| | |||||||||| | |||||||||| ||||||||||||| |||| || |||||    
T  13463230 aattgaattgtgacttgatgg-ttgtgtggacatgaatacttgataaatgcaattgttgaggagttgttcaat 13463159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 8e-67; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 38812325 - 38812487
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38812325 tcttatttgaattgtgacttgaatg-ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatat 38812423  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38812424 tgttgtg-aaaattatgaggtgatcttgcattgtcgagtctttgcttgtatgtccatgcatcata 38812487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 5229408 - 5229572
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| | ||| ||||||||||    
T  5229408 tcttaattgatttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatat 5229507  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5229508 tgttgttgaatattatgaggtgattttgcattgtcgagtttttgcttgtatgtccatgcatcata 5229572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 33370196 - 33370358
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||||||||    
T  33370196 tcttatttgaattatgacttgattg-ttgtgtggacgtacatacttgataatgcaattgtggttgagatgatcaatataattggaagttatcctttatat 33370294  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33370295 tattgtg-aaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 33370358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 38377144 - 38377310
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt-ggagatgatcaatatatttgaaagttgtcctttata 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| | ||  ||||||||||  || | ||| |||||||||    
T  38377144 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgaaattattgtcgaagtcgatcaatatagatggaggttatcctttata 38377243  T
Q  155 ttgttg-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38377244 ttgttgttgaatatttatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 38377310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 41660446 - 41660284
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| || |||||||| ||| | ||| ||||||||||    
T  41660446 tcttaatagaattatgacctgattg-ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtggtcaatataattggaggttatcctttatat 41660348  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41660347 tattgtg-aatattataaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 41660284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 12490078 - 12490227
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaa 167  Q
    |||||||||| || |||||||||||||| | |||||||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  12490078 tatgacttgaatg-ttgtgtggacgtaatttcttgataatgaaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtg-aaaa 12490175  T
Q  168 ttatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcat 219  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||| |||||    
T  12490176 ttatgagatgatcttgcattgtcgagtctttacttgtatgtccatggatcat 12490227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 12951880 - 12951719
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||| ||||||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  12951880 tcttatttgagttatgacttgaatg-ttgtgtggaagtaaatactggataatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatat 12951782  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||| |||| |||| | ||||| |||||||||||| |  ||||||||||||||||    
T  12951781 tgttgtg-aaaattgtgagatgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 12951719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 48420492 - 48420342
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggaga-tgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||||||||| || |||||||||||||| | ||||||||||||| ||||||||    ||||||||||||||| |||||||||||||||||||||||||||    
T  48420492 tatgacttgaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggtttgtgatcaatatatttggaagttgtcctttatattgttgtgaaaa 48420394  T
Q  167 attatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcat 219  Q
     ||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  48420393 -ttatgagatgatcttgcattgtcgagtctttacttgtatgtccatgcatcat 48420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 47983704 - 47983567
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||| ||||||| ||| ||    
T  47983704 ttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgttttg-aaagttatgagatga-tt 47983607  T
Q  182 tgcattg-tcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| || |||||||||| ||||||||||||||||||    
T  47983606 tgcattgatccagtctttgctcgtatgtccatgcatcata 47983567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 47992991 - 47992854
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||| ||||||| ||| ||    
T  47992991 ttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgttttg-aaagttatgagatga-tt 47992894  T
Q  182 tgcattg-tcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| || |||||||||| ||||||||||||||||||    
T  47992893 tgcattgatccagtctttgctcgtatgtccatgcatcata 47992854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 48002278 - 48002141
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||| ||||||| ||| ||    
T  48002278 ttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgttttg-aaagttatgagatga-tt 48002181  T
Q  182 tgcattg-tcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| || |||||||||| ||||||||||||||||||    
T  48002180 tgcattgatccagtctttgctcgtatgtccatgcatcata 48002141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 48011564 - 48011427
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||| ||||||| ||| ||    
T  48011564 ttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgttttg-aaagttatgagatga-tt 48011467  T
Q  182 tgcattg-tcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| || |||||||||| ||||||||||||||||||    
T  48011466 tgcattgatccagtctttgctcgtatgtccatgcatcata 48011427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 39654742 - 39654583
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||| | ||||||||||||| |  |||| | ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  39654742 tcttatttgaattatgacttgatcg-ttgtgtggacgtaca--cttggtgatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatat 39654646  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||| ||||||||| ||||||| |||||||||||| |  ||||||||||||||||    
T  39654645 tgttgtg-aaaattgtgaggtgatgttgcattatcgagtctttgc-tacatgtccatgcatcata 39654583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 15516563 - 15516402
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||| |||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  15516563 tcttatttgagttatgacttgatcg-ttgtgtggacgtaaacacttggtaatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatat 15516465  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||| |||| |||| | ||||| || ||||||||| |  ||||||||||||||||    
T  15516464 tgttgtg-aaaattttgagttgatgtcgcattatcaagtctttgc-tacatgtccatgcatcata 15516402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 11330345 - 11330499
Alignment:
Q  59 taattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    ||||||||||||||||||| || |||||||||||||||| ||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||||||    
T  11330345 taattgaattatgacttgaatg-ttgtgtggacgtaaattcttgataatgcaaatgtggtggagatgatcaatataattggaagttgtcctttatattgt 11330443  T
Q  159 tgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||| ||    ||||||||  ||||||||| ||||| || | |||||||||||||||||||    
T  11330444 tgtgataa---ttgaggtga--ttgcattgttgagtccttac-tgtatgtccatgcatcata 11330499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 9592119 - 9592245
Alignment:
Q  93 taaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcga 192  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||| ||||||||||| || |  ||||||| ||||| ||||||||||||    
T  9592119 taaatacttgataatgcaattgttgttgaggtgatcaatataattggaagttgtcatttatattgttttg-attattatgaagtgatgttgcattgtcga 9592217  T
Q  193 gtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||||||| ||||||||||    
T  9592218 gtctttgcttgtatgtctatgcatcata 9592245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 15874982 - 15874836
Alignment:
Q  67 ttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||  ||    
T  15874982 ttatgactagattg-ttgtgtggacgtaaattcttgataatgcaaatgttgtggagataatcaatatatttggaagttgtcctttatattgttgtg--aa 15874886  T
Q  167 attatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatca 218  Q
    | | ||||||||  ||||||||| ||||| || |||  ||||||||||||||    
T  15874885 agtttgaggtga--ttgcattgttgagtccttactttaatgtccatgcatca 15874836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 220
Target Start/End: Original strand, 11883604 - 11883759
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    ||||| ||||||||||| | |||||||||| || | ||||  |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11883604 ttgaaatatgacttgatcg-ttgtgtggacatagacacttcgtaatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgt 11883702  T
Q  162 gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |  ||| | ||||||||| | ||||| |||||||||||| |  ||||||||||||||||    
T  11883703 g-gaaagtgtgaggtgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 11883759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 15989723 - 15989649
Alignment:
Q  146 tcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||||||  || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15989723 tcctttatattgttgttgaatattatgaggtgatttttcattgtcgagtctttgcttgtatgtccatgcatcata 15989649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 14060575 - 14060684
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||  || |||||||||||||| | ||||||||||||| | |||||| ||||||||||||| ||  ||||||||||||||||    
T  14060575 tcttatttgaattatgacttgtatg-ttgtgtggacgtaatttcttgataatgcaaatattgtggggatgatcaatatagtttgaagttgtcctttatat 14060673  T
Q  156 tgttgtgaaaa 166  Q
    |||| ||||||    
T  14060674 tgttatgaaaa 14060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 12562851 - 12562971
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    |||||||||||||||||||||||||||||||||||||||| || || |||| |||||||| ||||||| || ||| ||| | | ||||| |||| |||||    
T  12562851 cttgataatgcaattgttgtggagatgatcaatatatttggaatttttcctctatattgtggtgaaaatttgtgaagtgttgtcgcattatcgaatcttt 12562950  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||||||||||||||    
T  12562951 g-ttacatgtccatgcatcata 12562971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 14294214 - 14294095
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| ||||||| || ||   |||| | ||||| ||||||||||    
T  14294214 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctgtatattgtggtgaaaa-ttgtggattgatgtcgcattatcgagtcttt 14294116  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||||||||||||||    
T  14294115 g-ttacatgtccatgcatcata 14294095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 14299841 - 14299722
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| ||||||| || ||   |||| | ||||| ||||||||||    
T  14299841 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctgtatattgtggtgaaaa-ttgtggattgatgtcgcattatcgagtcttt 14299743  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||||||||||||||    
T  14299742 g-ttacatgtccatgcatcata 14299722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 11198945 - 11199012
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  11198945 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaa 11199012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 17392065 - 17392014
Alignment:
Q  169 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17392065 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 17392014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 11062410 - 11062476
Alignment:
Q  100 ttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  11062410 ttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaa 11062476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 17759771 - 17759832
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17759771 tcttaattgaattttgacttgattgattgtgtg-acgtaaatacttgataatgcaattgttgt 17759832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 19061091 - 19061152
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19061091 tcttaattgaattttgacttgattgattgtgtg-acgtaaatacttgataatgcaattgttgt 19061152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 14522680 - 14522799
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||| ||| |||||| |||  |||| | ||||| |||||||| |    
T  14522680 cttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtg-aaaattgtgaattgatgtcgcattatcgagtctct 14522778  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||||||||||||||    
T  14522779 g-ttacatgtccatgcatcata 14522799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 40938516 - 40938449
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  40938516 cttgataatgcaaatgttatggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaa 40938449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 21168057 - 21168118
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  21168057 tcttaattgaataatgacatg-ttgattgtgtggacgtaaatacttgataatgcaattgttgt 21168118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 25105295 - 25105356
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  25105295 tcttaattgaataatgacatg-ttgattgtgtggacgtaaatacttgataatgcaattgttgt 25105356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 27050575 - 27050518
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattg 114  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27050575 tcttatttgaattatgacttg-ttgattgtgtggacgtaaatacttgataatgcaattg 27050518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 11401384 - 11401242
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt----gaaaaattatgaggtg 177  Q
    |||||||||||| ||||||||||||||||||||||| |||| || ||||| || ||| | ||  ||  ||| ||||||||    ||  |  |||||||||    
T  11401384 ttgtgtggacgtgaatacttgataatgcaattgttgaggagttgttcaatgtagttggaggtgatctcttacattgttgttgttgattatatatgaggtg 11401285  T
Q  178 attttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
       ||||||||||||||||||||||||||||||||||||||||    
T  11401284 gagttgcattgtcgagtctttgcttgtatgtccatgcatcata 11401242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 17138252 - 17138133
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    ||||||||| |||||||||||||||||||||||||| |||  |||||||||||||||||  ||| |||||| | | ||||| | ||||| ||||||||||    
T  17138252 cttgataattcaattgttgtggagatgatcaatatagttgggagttgtcctttatattgaggtg-aaaattgtaaagtgatgtcgcattatcgagtcttt 17138154  T
Q  199 gcttgtatgtccatgcatcata 220  Q
      ||  ||||||||||||||||    
T  17138153 -attacatgtccatgcatcata 17138133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 14297283 - 14297216
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  14297283 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 14297216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 14302910 - 14302843
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  14302910 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 14302843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 35122472 - 35122405
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  35122472 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 35122405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 17319913 - 17319974
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||    
T  17319913 tcttaattgaataatgacatt-ttgattgtgtggacgtaaatacttgataatgcaattgttgt 17319974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 55442130 - 55442215
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatat-atttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||| |||| |||| | ||| ||||||| | ||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  55442130 ttgtatggatgtaacttcttaataatgcgaatgttgtggagatgatcaatataattggaaagatgtcctttatattgttgtgaaaa 55442215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 43428871 - 43428932
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||| ||||||||||||||||||||||| |||||||||    
T  43428871 tcttaattgaataatgacatg-ttgattgcgtggacgtaaatacttgataatggaattgttgt 43428932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 17385693 - 17385638
Alignment:
Q  61 attgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg 117  Q
    |||||||||||||||| |||||||| |||| |||||||||||||||||||| |||||    
T  17385693 attgaattatgacttg-ttgattgtatggatgtaaatacttgataatgcaaatgttg 17385638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 17759888 - 17759932
Alignment:
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||| | ||||||||||||||||||||||||||||||    
T  17759888 tgattttgcattattgagtctttgcttgtatgtccatgcatcata 17759932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 53899894 - 53899961
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||| |||||||||||||||||| |||  ||||||||| |||| ||| |||||||    
T  53899894 cttgataatgcaaatgtggtggagatgatcaatataattgggagttgtcctatataatgtggtgaaaa 53899961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 8603530 - 8603469
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||| | || ||||||| ||||||||||||||||||||||||||| |||||    
T  8603530 tcttaattgaataatgtcatg-ttgattgcgtggacgtaaatacttgataatgcaatcgttgt 8603469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 17203518 - 17203457
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||| ||||||||| |||||| ||||||||||||||||||||    
T  17203518 tcttaattgaataatgacatg-ttggttgtgtggatgtaaatgcttgataatgcaattgttgt 17203457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 18968951 - 18968890
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||||||||| || |||||| ||||||||||||||||||||    
T  18968951 tcttaattgaataatgacatg-ttgattgtgtcgatgtaaatgcttgataatgcaattgttgt 18968890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 34558723 - 34558662
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||| |||||||| |||||| ||||||||||||||||||||    
T  34558723 tcttaattgaataatgacatg-ttgagtgtgtggatgtaaatgcttgataatgcaattgttgt 34558662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 17392185 - 17392122
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaata--cttgataatgcaattgttgt 118  Q
    ||||| ||||||| ||||||  |||||||||||||||||||||  ||||||||||||||||||||    
T  17392185 tcttatttgaattgtgacttt-ttgattgtgtggacgtaaatatacttgataatgcaattgttgt 17392122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 8630632 - 8630565
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  8630632 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 8630565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 17099499 - 17099432
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  17099499 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaa 17099432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 17523782 - 17523849
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||  ||||| |||||||||||||||| |||  ||||||||| |||||||  |||||||    
T  17523782 cttgataatgcacatgttgcggagatgatcaatataattgggagttgtcctatatattggggtgaaaa 17523849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 17913624 - 17913683
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    ||||||||||||| |||||||||||||| ||||||| ||| | || ||||| ||||||||    
T  17913624 cttgataatgcaaatgttgtggagatgaacaatataattggatgtcgtcctatatattgt 17913683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 19230845 - 19230778
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  19230845 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 19230778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 19572144 - 19572211
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  19572144 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaa 19572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 27050443 - 27050408
Alignment:
Q  185 attgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||||| |||||||||||||||||||||    
T  27050443 attgtcgagtctttacttgtatgtccatgcatcata 27050408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 47786256 - 47786315
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    |||||||||| || ||| |||||||||||||||||| |||  ||||||||| ||||||||    
T  47786256 cttgataatgaaaatgtggtggagatgatcaatataattgggagttgtcctatatattgt 47786315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 4163520 - 4163581
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||| ||||| |||||| ||| ||||||||||||||||    
T  4163520 tcttaattgaataatgacatg-ttgattgggtggatgtaaatgctttataatgcaattgttgt 4163581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 6229969 - 6230030
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| ||||||  || ||||||||||||||||    
T  6229969 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgttttataatgcaattgttgt 6230030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 13816298 - 13816240
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||    
T  13816298 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 13816240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 14817032 - 14817089
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattg 114  Q
    |||||| ||||| ||||| || ||||| ||||||| |||||||||||||||||||||||    
T  14817032 tcttaaatgaataatgacatg-ttgatcgtgtggatgtaaatacttgataatgcaattg 14817089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 19061210 - 19061252
Alignment:
Q  178 attttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||| | || |||||||||||||||||||||||||||    
T  19061210 attttgcattattgaatctttgcttgtatgtccatgcatcata 19061252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 10711355 - 10711399
Alignment:
Q  66 attatgacttgattgattgtgtggacgtaaatacttgataatgcaa 111  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||    
T  10711355 attatgacttg-ttgattgtgtggatctaaatacttgataatgcaa 10711399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 17320039 - 17320079
Alignment:
Q  180 tttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| | ||||||||||||||||| ||||||||||||    
T  17320039 tttgcattattgagtctttgcttgtatgcccatgcatcata 17320079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 8e-67; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 19434802 - 19434964
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  19434802 tcttatttgaattatgacttgaatg-ttgtgtggacgtaaatacttgataattcaattgttgtggagatgatcaatatatttggaagttgtcctttatat 19434900  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19434901 tgttgtg-aaaattatgagatgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 19434964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 43641658 - 43641496
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||    
T  43641658 tcttatttgaattatgacttgaatg-ttgtgtggacgtaaatacttgataatgcaattgttgtggaggtgatcaatatatttgaaagttgtccattacat 43641560  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  43641559 tgttgtg-aaaattatgagatgatttttcattgtcgagtctttgcttgtatgtctatgcatcata 43641496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 18534662 - 18534499
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||  | ||| ||||||||||    
T  18534662 tcttaattgatttatgacttgattgattgtgtggacgtaa-tacttgataatgcaattgttgttgaggtgatcaatataatttgaggttatcctttatat 18534564  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18534563 tgttgttgaatattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 18534499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 24276718 - 24276556
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||||||||||| |||| |||| ||| |||||||||||||||||||||||||||| ||| ||||||||||| ||| | ||| ||||||||||    
T  24276718 tcttaattgaattatgacttaattg-ttgtctggtcgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatat 24276620  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| || |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  24276619 tgttgtg-aatattatgagatgattttgcattgtcgagtctttgcttgtatgttcatgcatcata 24276556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 24562208 - 24562368
Alignment:
Q  61 attgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg-tggagatgatcaatatatttgaaagttgtcctttatattgtt 159  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||  || | ||| |||||||| |||||    
T  24562208 attgatttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaaggtgatcaatataaatggaggttatcctttattttgtt 24562307  T
Q  160 gtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||  || |||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  24562308 gttgaatattatgaggtgattttgcattgtcgagtatttgcttgtatgttcatgcatcata 24562368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 25304399 - 25304238
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| || ||||||||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  25304399 tcttatttaaattatgacttgaatg-ttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcatttatat 25304301  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| ||| ||  ||||||| |||||||||| ||||| || |||||||||||||||||||||    
T  25304300 tgttgtg-aaagtttggaggtga-tttgcattgttgagtccttacttgtatgtccatgcatcata 25304238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 23824799 - 23824957
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||  || |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23824799 tcttatttgaattatgacttgcatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatat 23824897  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    ||||||||  ||||||||| ||||| || |||||||||||||||||||||    
T  23824898 tgttgtgaaaa---ttgaggtga--ttgcattgttgagtccttacttgtatgtccatgcatcata 23824957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 62 - 220
Target Start/End: Complemental strand, 721293 - 721138
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  721293 ttgaattatgacttgattg-ttgtgtggacgtaaacacttggtaatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgttgt 721195  T
Q  162 gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | |||||| ||  ||||| | ||||| |||||||||||| |  ||||||||||||||||    
T  721194 g-aaaattgtgtagtgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 721138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 19670476 - 19670635
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19670476 tcttatttgaattatgacttgattg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatat 19670574  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||  ||| |  |||||||  ||||||||| ||||  || |||||||||||||||||||||    
T  19670575 tgttgtg--aaacttggaggtga--ttgcattgttgagttcttacttgtatgtccatgcatcata 19670635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 63 - 216
Target Start/End: Original strand, 22137166 - 22137316
Alignment:
Q  63 tgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtg 162  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||  || ||||||||| | || ||||||||||||||||||||||||    
T  22137166 tgaattatgacttgattg-ttgtgtggacgtaaatacttgataatgcaaatgttgttaaggtgatcaatacaatttaaagttgtcctttatattgttgtg 22137264  T
Q  163 aaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcat 216  Q
    |  |  | ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  22137265 atta--tttgaggtgatgttgcattgttgagtctttgcttgtatgtccatgcat 22137316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 23822855 - 23823013
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||  || |||||||||| ||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23822855 tcttatttgaattatgacttgcatg-ttgtgtggacataatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatat 23822953  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    ||||||||  ||||||||| ||||| || |||||||||||||||||||||    
T  23822954 tgttgtgaaaa---ttgaggtga--ttgcattgttgagtccttacttgtatgtccatgcatcata 23823013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 23831934 - 23832092
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||  || |||||||||| ||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23831934 tcttatttgaattatgacttgcatg-ttgtgtggacataatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatat 23832032  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    ||||||||  ||||||||| ||||| || |||||||||||||||||||||    
T  23832033 tgttgtgaaaa---ttgaggtga--ttgcattgttgagtccttacttgtatgtccatgcatcata 23832092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 4624 - 4781
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||| |||| || |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  4624 tcttatttgaattatgatttgaatg-ttgtgtggacgtaatttcttgataatgcaat-gttgtggagatgatcaatatatttggaagttgtcctttatat 4721  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    ||||||||  ||||||||| ||||| || |||||| |||||| |||||||    
T  4722 tgttgtgaaaa---ttgaggtga--ttgcattgttgagtccttacttgtacgtccatccatcata 4781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 24295919 - 24296077
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||| |  || |||||||||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  24295919 tcttatttgaattatgactcgcatg-ttgtgtggacgtaatttcttgataatgcaaatgttttggagatgatcaatatatttgaaagttgtcctttatat 24296017  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||| |   |||||||||  |||||||  | || || |||||||||||||||||||||    
T  24296018 tgttgtgaaaatt---gaggtgatt--gcattgttaactccttacttgtatgtccatgcatcata 24296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 24088710 - 24088818
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  24088710 tcttatttgaattatgacttgatcg-ttgtgtggacgtaaacacttggtaatgcaattgttgtggagataatcaatataattggaagttgtcctttatat 24088808  T
Q  156 tgttgtgaaa 165  Q
    ||||||||||    
T  24088809 tgttgtgaaa 24088818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 19658753 - 19658619
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||| |||| |||| | ||||||||||||| |||||||||||||||||| |||| || |||||||||||||||||||||||  ||||| ||||||||  |    
T  19658753 ttgtatggatgtaatttcttgataatgcaaatgttgtggagatgatcaacatatctggaagttgtcctttatattgttgtg--aaattttgaggtga--t 19658658  T
Q  182 tgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| | |||||||| ||| |||||||||||||||||    
T  19658657 tgcattcttgagtctttacttatatgtccatgcatcata 19658619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 6093683 - 6093621
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  6093683 tcttaattgaattatgacttgattgattgtgtgggtgtaaatacttgataatgcaattgttgt 6093621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 220
Target Start/End: Original strand, 45619375 - 45619537
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt-ggagatgatcaatatatttgaaagttgtcctttatattgttg 160  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||| |||| | |||||| ||  || | |   ||  ||| |||||||    
T  45619375 ttgaattgtgacttg-ttgattgtgtagacgtaaatacttgataatgcaattgttgttggagttaatcaatgtaaatggaggggatctcttacattgttg 45619473  T
Q  161 t----gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |    ||| |  |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45619474 ttgttgaatacatatgaggtgactttgcattgtcgagtctttgcttgtatgtccatgcatcata 45619537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 22787369 - 22787476
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||| | |||||||||| | ||| |||||||||| | |||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  22787369 tcttatttgattgatgacttgatcg-ttgcgtggacgtaatttcttggtaatgcaattgttgtggagatgatcaatatatttggaagtcgtcctctatat 22787467  T
Q  156 tgttgtgaa 164  Q
    ||| |||||    
T  22787468 tgtggtgaa 22787476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 24572765 - 24572884
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||| ||| |||||| ||| ||| | | ||||| ||||||||||    
T  24572765 cttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtg-aaaattgtgaagtgttatcgcattatcgagtcttt 24572863  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  |||| |||||||||||    
T  24572864 g-ttacatgttcatgcatcata 24572884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 7320274 - 7320207
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||||| |||||||| |||||||    
T  7320274 cttgataatgcaaatgttgtggagattatcaatatatttggaagttgtcctctatattgtggtgaaaa 7320207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 22581307 - 22581426
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    |||||||||||||  |||||||||||||||||||||| || |||||||||| |||||||| ||| |||||| |||  |||| | ||||| |||||||| |    
T  22581307 cttgataatgcaaacgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtg-aaaattgtgaattgatgtcgcattatcgagtctct 22581405  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||||||||||||||    
T  22581406 g-ttacatgtccatgcatcata 22581426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 19665487 - 19665435
Alignment:
Q  66 attatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  19665487 attatgacttaattgattgtgtggatgtaaatacttgataatgcaattgttgt 19665435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 22691324 - 22691391
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  22691324 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 22691391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 22695971 - 22696038
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  22695971 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 22696038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 20272233 - 20272171
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||||    
T  20272233 tcttatttgaattatgacttgattgattgagtggacataaatatttgataatgaaattgttgt 20272171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 269973 - 269906
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||| ||||||||||| |||  ||||||||| |||||||| |||||||    
T  269973 cttgataatgcaaatgttgtggaggtgatcaatataattgggagttgtcctatatattgtggtgaaaa 269906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 25133018 - 25132982
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||||||||||||||||||||||||||    
T  25133018 ttgtgtggacgtaaatacttgataatgcaattgttgt 25132982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 4449603 - 4449670
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||||| | | |||||||||||| ||| |||||||||| |||||||| |||||||    
T  4449603 cttgataatgcaaatgttgcgaaaatgatcaatataattggaagttgtcctatatattgtggtgaaaa 4449670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 25600747 - 25600688
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    ||||||||||||| ||||| |||||||||||||||| |||  ||||||||| ||||||||    
T  25600747 cttgataatgcaaatgttgcggagatgatcaatataattgggagttgtcctatatattgt 25600688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 27260369 - 27260302
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||||||||||||| |||||||| |||  ||||||||| |||||| | |||||||    
T  27260369 cttgataatgcaaatgttgtggagatggtcaatataattgggagttgtcctatatattatggtgaaaa 27260302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 66350 - 66278
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaa 141  Q
    |||||||||| || |||||||||||||| | ||||||||| ||| |||||||||  ||||||||||||| ||||    
T  66350 tatgacttgaatg-ttgtgtggacgtaatttcttgataatacaaatgttgtggatgtgatcaatatattagaaa 66278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 6093565 - 6093521
Alignment:
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||| | |||||| |||||||||||||||||||||||    
T  6093565 tgattttgcattattgagtctgtgcttgtatgtccatgcatcata 6093521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 24342740 - 24342776
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||| ||||||||||||||||||||||    
T  24342740 ttgtgtggacgtaattacttgataatgcaattgttgt 24342776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 24881442 - 24881406
Alignment:
Q  78 ttgattgtgtggacgtaaatacttgataatgcaattg 114  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24881442 ttgattgtgtggatgtaaatacttgataatgcaattg 24881406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 15632182 - 15632123
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    |||||||||||||||| ||||||||||| ||||||| |||   |||||||| ||||||||    
T  15632182 cttgataatgcaattgatgtggagatgaacaatataattgggtgttgtcctatatattgt 15632123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 36892083 - 36892150
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||||||||| || |||||||||||| ||||||||| |||  ||||||||| |||||||  |||||||    
T  36892083 cttgataatgaaaatgttgtggagataatcaatataattgggagttgtcctatatattgaggtgaaaa 36892150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 24827941 - 24827998
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    |||||||||||||| ||||||||||||||||||||| |||   |||||||| |||||||    
T  24827941 cttgataatgcaat-gttgtggagatgatcaatataattgggtgttgtcctatatattg 24827998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 24967083 - 24967025
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||    
T  24967083 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 24967025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 28972810 - 28972760
Alignment:
Q  116 tgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||||||||||||||||||| || | |||||||| |||||||| |||||||    
T  28972810 tgtggagatgatcaatatatatggatgttgtcctctatattgtggtgaaaa 28972760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 40641631 - 40641688
Alignment:
Q  60 aattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||| ||||| || ||| ||||||||| |||||| ||||||||||||||||||||    
T  40641631 aattgaataatgacatg-ttggttgtgtggatgtaaatgcttgataatgcaattgttgt 40641688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 23154174 - 23154222
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaa 111  Q
    ||||||||||||||| |||||| | |||| ||||||||||||||||||||    
T  23154174 ttgaattatgacttg-ttgattttatggatgtaaatacttgataatgcaa 23154222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 23565431 - 23565479
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaa 111  Q
    ||||||||||||||| |||||| | |||| ||||||||||||||||||||    
T  23565431 ttgaattatgacttg-ttgattttatggatgtaaatacttgataatgcaa 23565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 8e-67; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 37235294 - 37235456
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  37235294 tcttatttgaattatgacttgaatg-ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttaaat 37235392  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37235393 tgttgtg-aaaattatgaggtgatcttgcattgtcgagtctttgcttgtatgtccatgcatcata 37235456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 62 - 220
Target Start/End: Complemental strand, 21193994 - 21193838
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    |||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  21193994 ttgaattatgacttgaatg-ttgtgtggacgtaaatacttgagaatgtaattgttgtggagatgatcaatatatttggaagttatcctttatattgttgt 21193896  T
Q  162 gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  21193895 g-aaaattatgaggtgattttgcattgtcgagtctttgctagaatgtccatgcatcata 21193838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 8539285 - 8539447
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    
T  8539285 tcttatttgaattatgacttgaatg-ttgtgtggacgtaaatatttgataatgcaattgttgtggagatgatcaatatatttggaagttatcatttatat 8539383  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||| ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  8539384 tgtcgtg-aaaattatgaggtgattttgcattgctgagtctttgcttgtatgtccatgcatcata 8539447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 8604524 - 8604686
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || |||||||    
T  8604524 tcttatttgaattatgacttgaatg-ttgtgtggacgtaaatatttgataatgcaattgttgtggagatgatcaatatatttggaagttatcatttatat 8604622  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||| ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  8604623 tgtcgtg-aaaattatgaggtgattttgcattgctgagtctttgcttgtatgtccatgcatcata 8604686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 60 - 220
Target Start/End: Complemental strand, 20821785 - 20821625
Alignment:
Q  60 aattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgtt 159  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||  || | ||| ||||||||||||||    
T  20821785 aattgatttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatattgtt 20821686  T
Q  160 gtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||  || |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20821685 gttgaatattatgaggtgattttgcattgtcgaatctttgcttgtatgtccatgcatcata 20821625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 5471716 - 5471878
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| || ||||||||| | |||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||    
T  5471716 tcttaattgatttgtgacttgatag-ttgtgtggacgtaaatacttgataatgcaattgtggtggaggtgatcaatataattggaagttgtcctttatat 5471814  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| ||  | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5471815 tgttgtg-aatgtcatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 5471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 58 - 220
Target Start/End: Original strand, 77365 - 77527
Alignment:
Q  58 ttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    |||||||| |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| |||||||||||  || | ||| ||||||||||||    
T  77365 ttaattgatttatgacttgattgattgcgtggacgtaaatatttgataatgaaattgttgttgaggtgatcaatataaatggaggttatcctttatattg 77464  T
Q  158 ttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  77465 ttgttaaatattatgaagtgattttacattgtcgagtctttgcttgtatgtccatgcatcata 77527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 5769545 - 5769709
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||| | | | | | ||||||||||    
T  5769545 tcttaattgaattatgacttgattg-ttgtgtggacgtaaatacttgataatgcaattgtggttgaggtgatcaatataatcggaggctatcctttatat 5769643  T
Q  156 tgttgt-gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5769644 tgttgttgaatatttatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcgtcata 5769709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 59 - 219
Target Start/End: Original strand, 41213001 - 41213161
Alignment:
Q  59 taattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | | | ||| ||||||||||| |    
T  41213001 taattgaagtatgacttgattg-ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataatcggaggttatcctttatatttt 41213099  T
Q  159 tgt-gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcat 219  Q
    ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41213100 tgttgaatatttatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcat 41213161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 64 - 220
Target Start/End: Original strand, 22144734 - 22144887
Alignment:
Q  64 gaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtga 163  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||| |||||| ||| ||||||||||| |||||||||||| |||||||||||||||    
T  22144734 gaattatgacttgattg-ttatgtggacgtaaacacttgataatgcaaatgttgttgaggtgatcaatataattgaaagttgtcttttatattgttgtga 22144832  T
Q  164 aaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
        || ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  22144833 ct--ttttgaggtgatgttgcattgtcgagtctttgcttgtatgtacatgcatcata 22144887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 22836586 - 22836729
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  22836586 tcttatttgaattatgacttgatcg-ttgtgtggacgtaaacacttggtaatgcaattgttgtggaaatgatcaatatatttggaagttgtcctctatat 22836684  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgct 201  Q
    ||||||| |||||||||||||||| | ||||| |||||||||||||    
T  22836685 tgttgtg-aaaattatgaggtgatgtcgcattatcgagtctttgct 22836729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 13378095 - 13378256
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||    
T  13378095 tcttatttgaattatgacttgaatg-ttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagatgtcatttatat 13378193  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | ||||| ||| ||  ||||||| |||||||||| ||||| || |||||||||||||||||||||    
T  13378194 ttttgtg-aaagtttggaggtga-tttgcattgttgagtccttacttgtatgtccatgcatcata 13378256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 38034958 - 38035116
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||  || |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  38034958 tcttatttgaattatgacttgcatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatat 38035056  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    ||||||||  ||||||||| ||||| || ||||||||| |||||||||||    
T  38035057 tgttgtgaaaa---ttgaggtga--ttgcattgttgagtccttacttgtatgtgcatgcatcata 38035116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 20956303 - 20956463
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||| |||||||||||||  ||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20956303 tcttatttgaaatatgacttgattg--tgtatggacgtgatttcttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctctatat 20956400  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||| |||||||||   ||||| || ||||||||| |  ||||||||||||||||    
T  20956401 tgttgtg-aaaattgtgaggtgatggcgcattatcaagtctttgc-tacatgtccatgcatcata 20956463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 51657662 - 51657821
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||||||| |||||||  ||| ||||| | | | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51657662 tcttaattgaattatgatttgattg--tgtatggacatgatttcatgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatat 51657759  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||| ||| |||||| ||| ||||| ||||||| |||||||||||  |  ||||||||||||||||    
T  51657760 tgtggtg-aaaattgtgaagtgatgttgcattatcgagtctttg--tacatgtccatgcatcata 51657821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 36357674 - 36357832
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||  || |||||||||| ||| | ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  36357674 tcttatttgaattatgacttgcatg-ttgtgtggacataatttcttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctttatat 36357772  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    ||||||||  ||||||||| ||||| || ||||||| | |||||||||||    
T  36357773 tgttgtgaaaa---ttgaggtga--ttgcattgttgagtccttacttgtatattcatgcatcata 36357832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 19601986 - 19601852
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||| ||||||||| | ||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||  |||||||  |    
T  19601986 ttgtatggacgtaatttcttgacaatgcaaatgttgtggagatcatcaatatatttggaagttgtcctttatattgttgtg--aaatttggaggtga--t 19601891  T
Q  182 tgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| ||||| || |||||||||||||||||||||    
T  19601890 tgcattgttgagtccttacttgtatgtccatgcatcata 19601852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 56 - 198
Target Start/End: Complemental strand, 27673680 - 27673540
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||| |||||| | ||||||||| |||| | ||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||    
T  27673680 tcttatttgaattatgtcttgatcg-ttgtgtggatgtaatttcttgataatacaattgttttggagatgatcaatatatttggaagttgtcctctatat 27673582  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    ||||||| |||||| ||||||| | | ||||| ||||||||||    
T  27673581 tgttgtg-aaaattgtgaggtggtgtcgcattatcgagtcttt 27673540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 33396179 - 33396115
Alignment:
Q  54 attcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33396179 attcttaattgaattatgacttgattgattttgtggacgtaaatacttgataatgcaattgttgt 33396115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 35523799 - 35523866
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  35523799 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 35523866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 49998653 - 49998714
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  49998653 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 49998714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 21716989 - 21716923
Alignment:
Q  100 ttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||||||||||| |||||||||||||| ||||||| |||  ||||||||| |||||||| |||||||    
T  21716989 ttgataatgcaaatgttgtggagatgagcaatataattgggagttgtcctatatattgtggtgaaaa 21716923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 46144631 - 46144570
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| ||||||||||||||||| |||||||||    
T  46144631 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatacttgataatgtaattgttgt 46144570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 35053626 - 35053559
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  35053626 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 35053559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 17022411 - 17022350
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||| ||||||||| |||||| ||||||||||||||||||||    
T  17022411 tcttaattgaataatgacatg-ttggttgtgtggatgtaaatgcttgataatgcaattgttgt 17022350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 17607792 - 17607731
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||| ||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||||    
T  17607792 tcttaagtgaataatgacatg-ttgattgtgtggatgtaaatgcttgataatgcaattgttgt 17607731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 40437607 - 40437668
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||| || ||||| |||| |||||||||||| ||||||||| ||||||||||||||||    
T  40437607 tcttaattggataatgacatgat-gattgtgtggacataaatacttaataatgcaattgttgt 40437668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 33396059 - 33396015
Alignment:
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||| | || |||||||||||||||||||||||||||    
T  33396059 tgattttgcattattgattctttgcttgtatgtccatgcatcata 33396015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 5675980 - 5676047
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  5675980 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 5676047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 22407574 - 22407641
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  22407574 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaa 22407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 49966433 - 49966375
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||    
T  49966433 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 49966375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 52399461 - 52399425
Alignment:
Q  78 ttgattgtgtggacgtaaatacttgataatgcaattg 114  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  52399461 ttgattgtgtggatgtaaatgcttgataatgcaattg 52399425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 25756786 - 25756624
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25756786 tcttaattgatttatgacttgaatg-ttgtgtggacgtaaatactttataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatat 25756688  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  25756687 tgttgtg-aaaattatgaggtgatattgcattgttgagtctttgcttgtatgtccatgcatcata 25756624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 45560549 - 45560712
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| | ||| ||||||||||    
T  45560549 tcttaattgaattatgacttgattgattgcgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatat 45560648  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45560649 tgttgtg-aatattatgagatgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 45560712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 18042892 - 18043056
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| | ||| ||||||||||    
T  18042892 tcttaattgatttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatat 18042991  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  18042992 tgttgttgaatattatgaggtgattttgcaatgtcgagtctttgcttttatgtccatgcatcata 18043056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 11543348 - 11543184
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||  || | ||| | ||||||||    
T  11543348 tcttaattgatttatgacttgattgattgtgtggacgtaaatacttgataatacaattgttgttgaggtgatcaatataaatggaggttattctttatat 11543249  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11543248 tgttgttgaatattatgatgtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 11543184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 37654979 - 37655140
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||     
T  37654979 tcttatttgaattatgacttgaatg-ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatgtggaagttatcctttatac 37655077  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||||||| |||||||||||||||  |||||||||||||||||||||||||||||    
T  37655078 tgttgtg-aaaattatga-gtgattttgcattgtatagtctttgcttgtatgtccatgcatcata 37655140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 25294803 - 25294635
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataat------gcaattgttgtggagatgatcaatatatttgaaagttgtcct 149  Q
    |||||||||| ||||||||||| || |||||||||||||||||||| |||||      ||||||||||||||||||||||||||||||| ||||||||||    
T  25294803 tcttaattgatttatgacttgaatg-ttgtgtggacgtaaatactttataatattaatgcaattgttgtggagatgatcaatatatttggaagttgtcct 25294705  T
Q  150 ttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  25294704 ttatattgttgtg-aaaattatgaggtgatattgcattgttgagtctttgcttgtatgtccatgcatcata 25294635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 24238379 - 24238213
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg-tggagatgatcaatatatttgaaagttgtcctttata 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || || |||||||||||  || | ||| |||||||||    
T  24238379 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgaaattgttgttgaagttgatcaatataaatggaggttatcctttata 24238280  T
Q  155 ttgttg-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24238279 ttgttgttgaatatatatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 24238213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 213
Target Start/End: Complemental strand, 22312503 - 22312346
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||  || | ||| ||||||||||    
T  22312503 tcttaatttatttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatat 22312404  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatg 213  Q
    ||||||  || |||||||| ||||||||||||||||||||||||||||||||||||||    
T  22312403 tgttgttgaatattatgagatgattttgcattgtcgagtctttgcttgtatgtccatg 22312346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 33171095 - 33170931
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| | | | ||||||||||    
T  33171095 tcttaattgaattatgacctgattg-ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggctatcctttatat 33170997  T
Q  156 tgttg-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||| |||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33170996 tgttgttgaatatttatgaggtgattttgcattgtcgagtctttgcttttatgtccatgcatcata 33170931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 22498632 - 22498797
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||  || | ||| ||| ||||||    
T  22498632 tcttaattgaattatgacttgattgattgtgtggacgtaaatacgtgattatgcaattgttgttgaggtgatcaatataaatggaggttatccattatat 22498731  T
Q  156 tgttg-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||| ||||   |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22498732 tgttgttgaatgtttatgaggtgatttggcattgtcgagtctttgcttgtatgtccatgcatcata 22498797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 54 - 220
Target Start/End: Original strand, 23116148 - 23116314
Alignment:
Q  54 attcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttat 153  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||  || | | | ||||||||    
T  23116148 attctcaattgaattatgacttgattg-ttgtgtgtacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggctatcctttat 23116246  T
Q  154 attgttgt-gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23116247 attgttgttgaatatttatgaggtgattttgcattgtctagtctttgcttgtatgtccatgcatcata 23116314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 33612393 - 33612556
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||    
T  33612393 tcttatttgaattatgatttgattg-ttgtgtggacgtgaatacttaataatgcaattgttgttgaggtgatcaatataattggaagttgtcctttatat 33612491  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcatat 221  Q
    ||||||| |  |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  33612492 tgttgtg-attattatgagatgatgttgcattgtcgagtctttgcttgtatgcccatgcatcatat 33612556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 23148724 - 23148562
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||| ||| ||||||||||| ||| ||||||||||||||||    
T  23148724 tcttatttgaattatgacttgattg-ttgtgtggacgcaaacacttgataatgcaaatgttgttgaggtgatcaatataattggaagttgtcctttatat 23148626  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||| || |  |||||||| |||| |||||||||||||||||| |||||||||||||||||||||    
T  23148625 tgttttg-attattatgagatgatgttgcattgtcgagtctttacttgtatgtccatgcatcata 23148562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 21199508 - 21199667
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||  |||||||| || || |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  21199508 tcttaattgttttatgactggaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatat 21199606  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||  ||| | ||||||||  ||||||||| ||||| || |||||||||||||||||||||    
T  21199607 tgttgtg--aaagtttgaggtga--ttgcattgttgagtccttacttgtatgtccatgcatcata 21199667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 23836025 - 23835889
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||| ||| ||  ||||||| ||    
T  23836025 ttgtgtggacgtaattacttgataatgcaattgttgaggaaatgatcaatatatttggaagttttcctttatattgttgtg-aaagtttggaggtga-tt 23835928  T
Q  182 tgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||||| || |||||||||||||||||||||    
T  23835927 tgcattgtcgagtccttacttgtatgtccatgcatcata 23835889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 39448159 - 39448316
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||||||||||||| || |||||||||||||| | ||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||    
T  39448159 tcttaattgaattatgacttgaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatataatttgaagttgtcctttatat 39448257  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    || |||||  ||||||||| ||||| || | |||||||||||||||||||    
T  39448258 tgttgtgaaaa---ttggggtga--ttgcattgttgagtccttac-tgtatgtccatgcatcata 39448316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 21192081 - 21192240
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||  |||||||| || | ||||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||| |||||||| |||||||    
T  21192081 tcttaattgttttatgactggaat-attgtgtggacgtaatttcttgataatacaaatgttgtggagatgatcaatatatttggaagttgtcatttatat 21192179  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||  ||| | ||||||||  ||||||||| ||||| || |||||||||| ||||||||||    
T  21192180 tgttgtg--aaagtttgaggtga--ttgcattgttgagtccttacttgtatgtcaatgcatcata 21192240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 31195644 - 31195778
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||| ||||||||| | ||||||||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||||||  |||||  |||||||  |    
T  31195644 ttgtatggacgtaatttcttgataatgcaaatgttgcggagataatcaatatatttggaagttgtcctttatattgttgtg--aaatttggaggtga--t 31195739  T
Q  182 tgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| ||||| || |||||||||||||||||||||    
T  31195740 tgcattgttgagtccttacttgtatgtccatgcatcata 31195778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 18768121 - 18768239
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||| |||||| ||| ||||| |    
T  18768121 ttgtgtggacgtaatttcttgataatgcaattgttgtggagatgataaatatatttggaagttgtcctctatattgtggtg-aaaattgtgaagtgatgt 18768219  T
Q  182 tgcattgtcgagtctttgct 201  Q
     ||||| |||||||||||||    
T  18768220 cgcattatcgagtctttgct 18768239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 25608867 - 25608803
Alignment:
Q  54 attcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25608867 attcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 25608803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 22737217 - 22737355
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    ||||||||||||||||| | |||||||||||||| | |||| ||||||| |||| |||||||||||||||||||||| |||||||||| ||||| || ||    
T  22737217 ttgaattatgacttgatcg-ttgtgtggacgtaatttcttggtaatgcatttgtggtggagatgatcaatatatttggaagttgtcctctatatggtggt 22737315  T
Q  162 gaaaaattatgaggtgattttgcattgtcgagtctttgct 201  Q
    ||||| |  ||||||||| |  |||| |||||||||||||    
T  22737316 gaaaattgttgaggtgatgtcacattatcgagtctttgct 22737355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 17265734 - 17265672
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17265734 tcttaattgaattatgacttgattgattgtgtggacgtaaataattgataatgcaattgttgt 17265672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 38532436 - 38532317
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||| || | ||||| ||| ||||| | ||||| ||||||||||    
T  38532436 cttgataatataattgttgtggagatgatcaatatatttggaagttgtcctttatattgtggt-agaaattgtgaagtgatgtcgcattatcgagtcttt 38532338  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||||||||||||||    
T  38532337 g-ttacatgtccatgcatcata 38532317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 19332961 - 19333023
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19332961 tctttattgaattataacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 19333023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 21696348 - 21696283
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaa 164  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  21696348 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaa 21696283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 17730837 - 17730955
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||   | |||||| || |||||| | ||||| ||||||||||    
T  17730837 cttgttaatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgt--gggaaaattgtggggtgatgtcgcattatcgagtcttt 17730934  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||| ||||||||||    
T  17730935 g-ttacatgtctatgcatcata 17730955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 28543723 - 28543659
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtga 163  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||| ||||    
T  28543723 cttgataatgcaaatgttgtggagatgatcaatatatgtggaagttgtcctctatattgtggtga 28543659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 20568639 - 20568706
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  20568639 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 20568706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 20574832 - 20574899
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  20574832 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 20574899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 20655396 - 20655463
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  20655396 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 20655463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 7469109 - 7469048
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  7469109 tcttaattgaataatgacatg-ttgattgtgtgggcgtaaatacttgataatgcaattgttgt 7469048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 24266862 - 24266801
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  24266862 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 24266801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 20648811 - 20648878
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  |||||| || |||||||| |||||||    
T  20648811 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgttctatatattgtggtgaaaa 20648878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 21679989 - 21679922
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||| |||||||||| ||||||||||| |||||||| | |||||||| |||||||    
T  21679989 cttgataatgcaaatgtggtggagatgaacaatatatttggaagttgtcatctatattgtggtgaaaa 21679922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 25121329 - 25121262
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| ||| |||||||||| |||||||  |||||||    
T  25121329 cttgataatgcaaatgttgtggagataatcaatataattggaagttgtcctatatattgaggtgaaaa 25121262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 24553910 - 24553971
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||| |||||||||||||||||||||||||||||||| ||||    
T  24553910 tcttaattgaataatgacatg-ttgcttgtgtggacgtaaatacttgataatgcaattattgt 24553971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 23227360 - 23227417
Alignment:
Q  61 attgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||| |||||||| | |||||||||||||| |||||||||||||||||||||| ||||    
T  23227360 attggattatgacctaattgattgtgtggatgtaaatacttgataatgcaatttttgt 23227417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 29296735 - 29296678
Alignment:
Q  78 ttgattgtgtggacgtaaatacttgataatgcaattgttg-tggagatgatcaatata 134  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| ||| |||||||    
T  29296735 ttgattgtgtggatgtaaatacttgataatgcaattgttgttggagttgaacaatata 29296678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 15932181 - 15932120
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||| ||||||||||||| ||||||    
T  15932181 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgcttgataatgcaaatgttgt 15932120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 38637000 - 38637061
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| | |||||||||||||| ||||||  |||||||||||||||||||    
T  38637000 tcttaattgaataatgacat-attgattgtgtggatgtaaatgattgataatgcaattgttgt 38637061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 17265613 - 17265572
Alignment:
Q  179 ttttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||| | ||||||||||||||||||||||||||||||    
T  17265613 ttttgcattattgagtctttgcttgtatgtccatgcatcata 17265572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 19333079 - 19333123
Alignment:
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||    
T  19333079 tgattttgcattattgagtctttgctcgtatgtccatgcatcata 19333123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 16417047 - 16416980
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  16417047 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaa 16416980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 22908856 - 22908915
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| ||||||||    
T  22908856 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgt 22908915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 37605779 - 37605712
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  37605779 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 37605712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 37610153 - 37610086
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  37610153 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 37610086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 17284112 - 17284051
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||||||| || ||| ||||||||| || |||  |||||||||||||||||||    
T  17284112 tcttaattgaattatgacatg-ttggttgtgtggatgtgaatgtttgataatgcaattgttgt 17284051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 24718789 - 24718847
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||    
T  24718789 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 24718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 7468981 - 7468941
Alignment:
Q  180 tttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| | ||||||||| ||||||||||||||||||||    
T  7468981 tttgcattattgagtctttgtttgtatgtccatgcatcata 7468941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 23153267 - 23153303
Alignment:
Q  184 cattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||| |||||||| |||||||||||||||||||||||    
T  23153267 cattatcgagtctatgcttgtatgtccatgcatcata 23153303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 24554038 - 24554078
Alignment:
Q  180 tttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| | |||||||||||||||||| |||||||||||    
T  24554038 tttgcattattgagtctttgcttgtatgttcatgcatcata 24554078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 41257686 - 41257848
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||||||||    
T  41257686 tcttatttgaattatgacttgattg-ttgtgtggatgtaaatacttgataatgcaattgtggttgagatgatcaatataattggaagttatcctttatat 41257784  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41257785 tgttgtg-aaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 41257848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 19558167 - 19558002
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||| | ||| | ||||||||    
T  19558167 tcttaattgatttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaggcgatcaatataattggaggttattctttatat 19558068  T
Q  156 tgttg-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||| |||| | ||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  19558067 tgttgttgaatatttatgaggtaattttgcattgttgagtctttgcttgtatgtccatgcatcata 19558002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 54364904 - 54365069
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtgga-gatgatcaatatatttgaaagttgtcctttata 154  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| || | |||||||||||  || | ||| |||||||||    
T  54364904 tcttaattgaattatgacttgattgattgtgtggatgtaaacacttgataattcaattgttgttgaaggtgatcaatataaatggaggttatcctttata 54365003  T
Q  155 ttgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54365004 ttgttgttgaatattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 54365069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 5372029 - 5372193
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||||||| ||| | ||| ||||||||||    
T  5372029 tcttaattgatttatgacttgattgattgtgtggacgtaaatacttgataatgtcattgttgttgaggtgatcaatataattggaggttatcctttatat 5372128  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || ||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  5372129 tgttgttgaatattatgaggtgattttgcattgtcgagtcttttgttgtatgttcatgcatcata 5372193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 24237723 - 24237560
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg-tggagatgatcaatatatttgaaagttgtcctttata 154  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||  ||||||||||  | || ||| |||||||||    
T  24237723 tcttaattgaattatgacttgattgattgagtggacgtaaatacttgataatgcaattgttgttgaagtcgatcaatatagataaaggttatcctttata 24237624  T
Q  155 ttgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||  |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24237623 ttgt--tgaatatttatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 24237560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 60 - 220
Target Start/End: Original strand, 47469672 - 47469832
Alignment:
Q  60 aattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgtt 159  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||| | ||| ||||||||||||||    
T  47469672 aattgaattataacttgattg-ttgtgtggacgtaaatacttgataatgcaatcgttgtcgaggtgatcaatataattggaggttatcctttatattgtt 47469770  T
Q  160 g-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | |||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47469771 gttgaatatttatgaggtgattttgcattgtcaagtctttgcttgtatgtccatgcatcata 47469832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 49070662 - 49070496
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagat-gatcaatatatttgaaagttgtcctttata 154  Q
    ||||||||||  |||||||||||||||| ||||||||| |||||||||||||||||||||||| ||  | ||||||||||  || | ||| |||||||||    
T  49070662 tcttaattgatctatgacttgattgattatgtggacgttaatacttgataatgcaattgttgttgaagtcgatcaatatagatggaggttatcctttata 49070563  T
Q  155 ttgttgt-gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  49070562 ttgttgttgaatatttatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgaatcata 49070496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 63 - 220
Target Start/End: Complemental strand, 14900300 - 14900149
Alignment:
Q  63 tgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtg 162  Q
    |||||||| ||||||||| |||||||||| | |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  14900300 tgaattatcacttgattg-ttgtgtggacatgaatacttggtaatgcaatcgtggtggagatgatcaatatatttgaaagttgtcctttatattgttgtg 14900202  T
Q  163 aaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||     |||| |||| |||||||||||||||||||| | |||||||||||||||||    
T  14900201 aaat----tgagatgatgttgcattgtcgagtctttgc-tatatgtccatgcatcata 14900149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 15043768 - 15043607
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||| |||||||| |||  |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15043768 tcttatttgatttatgactcgatc-attgtgtggacgtaaacagttggtaatgcaattgttgtggagatgatcaatatatttgaaagttgtcctctatat 15043670  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||| ||||||||| | ||||| |||||||||||| |  ||||||||||||||||    
T  15043669 tgttgtg-aaaattgtgaggtgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 15043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 15110656 - 15110817
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||| |||||||| |||  |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15110656 tcttatttgatttatgactcgatc-attgtgtggacgtaaacagttggtaatgcaattgttgtggagatgatcaatatatttgaaagttgtcctctatat 15110754  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||| ||||||||| | ||||| |||||||||||| |  ||||||||||||||||    
T  15110755 tgttgtg-aaaattgtgaggtgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 15110817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 219
Target Start/End: Original strand, 50223494 - 50223656
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||| ||| || |||||||    
T  50223494 tctttattgaattatgacttgattg-ttgtgtggacgtaaatacttaataatgcaattgttgtcgaggtgatcaatataattgaaggttatcttttatat 50223592  T
Q  156 tgttg-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcat 219  Q
    ||||| |||| | | |||| |||||||||||||||  ||||||||||| ||||||||||||||||    
T  50223593 tgttgttgaatactcatga-gtgattttgcattgttaagtctttgcttatatgtccatgcatcat 50223656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 41167275 - 41167433
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || |||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  41167275 tcttatttgaattatgacttgaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttgaaagttgtcatttatat 41167373  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    || |||||||     ||||||||  ||||||||| ||||| || |||| ||||||||||||||||    
T  41167374 tgctgtgaaa---gttgaggtga--ttgcattgttgagtccttacttgcatgtccatgcatcata 41167433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 201
Target Start/End: Original strand, 43282730 - 43282861
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaa 167  Q
    |||||||||| || |||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  43282730 tatgacttgaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtg-aaaa 43282827  T
Q  168 ttatgaggtgattttgcattgtcgagtctttgct 201  Q
    || ||||||||| | ||||| |||||||||||||    
T  43282828 ttgtgaggtgatgtcgcattatcgagtctttgct 43282861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 15852657 - 15852815
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||| |||  || |||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  15852657 tcttatttgaattatgatttgcatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtagagatgatcaatatatttggaagttgtcctttatat 15852755  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    ||||||||  ||||||||| ||||| || ||||| |||||||||||||||    
T  15852756 tgttgtgaaaa---ttgaggtga--ttgcattgttgagtccttacttgtttgtccatgcatcata 15852815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 12245591 - 12245751
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || |||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||| ||| ||||||||||||    
T  12245591 tcttatttgaattatgacttgaatg-ttgtgtggacgtaattacttgataatgcaattattgaggagacgatcaatatatttggaagatgtcctttatat 12245689  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||| | |   |||||||||| |||||||  |||  || |||||||||||||||||||||    
T  12245690 tgttgtgaagattg--gaggtgattt-gcattgtttagttcttacttgtatgtccatgcatcata 12245751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 52266807 - 52266960
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    ||||||||||||||||| | |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||||| ||    
T  52266807 ttgaattatgacttgatcg-ttgtgtggacgtaatttcttgataatgcaattgttgtagagatgatcaatatatttggaagttatcctctatattgtggt 52266905  T
Q  162 gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatca 218  Q
    | |||||| ||| ||||| | ||||| |||||||||||| |  ||||||||||||||    
T  52266906 g-aaaattgtgaagtgatgtcgcattatcgagtctttgc-tacatgtccatgcatca 52266960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 17213183 - 17213342
Alignment:
Q  61 attgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtgga-gatgatcaatatatttgaaagttgtcctttatattgtt 159  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||||||| || | || ||||||||  |||| ||| || |||||||||||    
T  17213183 attgaattgtgacttg-ttgattgtgtggatgtaaatacttgataatgcacttgttgttgaagttgttcaatataaatgaaggttatcttttatattgtt 17213281  T
Q  160 gtgaaaaat-tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||  |   | ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17213282 gttgattgtatatgaggtgattt-gcattgtcgagtctttgcttgtatgtccatgcatcata 17213342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 34197530 - 34197664
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||| |||| |||| | ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||  ||| |  |||||||  |    
T  34197530 ttgtatggatgtaatttcttgataatgcaaatgttgtggagatgaccaatatatttggaagttgtcctttatattgttgtg--aaagttggaggtga--t 34197625  T
Q  182 tgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| ||||| || |||||||||||||||||||||    
T  34197626 tgcattgttgagtccttacttgtatgtccatgcatcata 34197664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 37958422 - 37958556
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||| ||||||||| | ||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||||  ||| |  |||||||  |    
T  37958422 ttgtatggacgtaatttcttgataatgcaaatgttgtagagatgatcaatatatttggaagttgtcctttgtattgttgtg--aaagttggaggtga--t 37958517  T
Q  182 tgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| ||||| || |||||||||||||||||||||    
T  37958518 tgcattgttgagtccttacttgtatgtccatgcatcata 37958556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 27959859 - 27959753
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||| ||| ||||| || |||||||||||||| | |||||||||||||  || |||||||||||||||||| ||| ||||||||||||||||    
T  27959859 tcttaattgaatcatggcttgaatg-ttgtgtggacgtaatttcttgataatgcaaacgtagtggagatgatcaatataattggaagttgtcctttatat 27959761  T
Q  156 tgttgtga 163  Q
    ||||||||    
T  27959760 tgttgtga 27959753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 17376882 - 17376978
Alignment:
Q  124 tgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||  || | ||| ||||||||||| ||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  17376882 tgatcaatataaatggaggttatcctttatatttttgttgaatattatgaggtgattttgcattgtcgagtctttacttgtatgttcatgcatcata 17376978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 10238857 - 10238932
Alignment:
Q  146 tcctttatattgttgt-gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10238857 tcctttatattgttgttgaatatttatgaggtgattttgcattgtcaagtctttccttgtatgtccatgcatcata 10238932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 13811003 - 13811122
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    |||||||||| |||||||||||| || ||||||||||||| |||||||||| |||||||| ||| |||||| ||| || || | ||||| ||||||||||    
T  13811003 cttgataatggaattgttgtggaaataatcaatatatttggaagttgtcctctatattgtggtg-aaaattgtgaagtaatgtcgcattatcgagtcttt 13811101  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||||||||||||||    
T  13811102 g-ttacatgtccatgcatcata 13811122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 18495780 - 18495847
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||||||||| |||||||| |||||||    
T  18495780 cttgataatgcaaatgttgtgaagatgatcaatatatttggaagttgtcctctatattgtggtgaaaa 18495847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 44054707 - 44054640
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  44054707 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 44054640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 10238787 - 10238848
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||||||||    
T  10238787 tcttaattggattatgactttattg-ttgtgtggacgtaaatatttgataatgcaattgttgt 10238848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 7187246 - 7187307
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg 117  Q
    ||||| |||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||    
T  7187246 tcttatttgaattatgacttaattgactgtgtggatgtaaatacttgatagtgcaattgttg 7187307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 18275672 - 18275611
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||||    
T  18275672 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgcttgataatgcaattgttgt 18275611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 21960941 - 21961008
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||||||||||| |  | ||||||||| |||||||| |||||||    
T  21960941 cttgataatgcaaatgatgtggagatgatcaatataatcaagagttgtcctatatattgtggtgaaaa 21961008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 42707588 - 42707549
Alignment:
Q  79 tgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  42707588 tgattgtgtggatgtaaatacttgataatgcaattgttgt 42707549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 12733008 - 12732947
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| |||  ||||||||||||| |||||||| ||||||||||||||||    
T  12733008 tcttaattgaataatgacatgac-gattgtgtggacgcaaatacttaataatgcaattgttgt 12732947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 38763637 - 38763576
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||| | || ||||||||||||| |||||| ||||||||||||||||||||    
T  38763637 tcttaattgaataatggcatg-ttgattgtgtggatgtaaatgcttgataatgcaattgttgt 38763576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 10115705 - 10115753
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaa 111  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  10115705 ttgaattatgacttg-ttgattgtgtggatgtaaaaacttgataatgcaa 10115753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 11923440 - 11923488
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaa 111  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  11923440 ttgaattatgacttg-ttgattgtgtggatgtaagtacttgataatgcaa 11923488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 10105523 - 10105559
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||| ||||||||||||||||||||||    
T  10105523 ttgtgtggacgtaattacttgataatgcaattgttgt 10105559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 15676248 - 15676284
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||| ||||||||||||||||||||||    
T  15676248 ttgtgtggacgtaattacttgataatgcaattgttgt 15676284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 31114607 - 31114571
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||| ||||||||||||||||||||||    
T  31114607 ttgtgtggacgtaattacttgataatgcaattgttgt 31114571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 53706163 - 53706230
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  53706163 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaa 53706230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 53909143 - 53909210
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  53909143 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctgtatattgaggtgaaaa 53909210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 13933585 - 13933541
Alignment:
Q  66 attatgacttgattgattgtgtggacgtaaatacttgataatgcaa 111  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||||    
T  13933585 attatgacttg-ttgattgtgtgaatgtaaatacttgataatgcaa 13933541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 30233917 - 30233973
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||    
T  30233917 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatat 30233973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 56 - 219
Target Start/End: Original strand, 24226800 - 24226961
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  24226800 tcttatttgaattatgacttgaatg-ttgtgtggacgtaaatacttgataatgcaattgttgtggaggtgatcaatatatttggaagttgtcctttatat 24226898  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcat 219  Q
    ||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  24226899 tgtcgtg-aaaattatgagatgattttgcattgtcgagtctttgcttgtatgttcatgcatcat 24226961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 11964785 - 11964621
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| ||| |  || ||||| ||||    
T  11964785 tcttaattgatttatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaggtggtcaatataattggagtttatccttcatat 11964686  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11964685 tgttgttgaatattatgaggtgatgttgcattgtcgagtctttgcttgtatgtccatgcatcata 11964621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 20455428 - 20455592
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| ||| |  || || |||||||    
T  20455428 tcttaattgatttatgacttgattgattgtgtggacgtaaatacttgataatgccattgttgttgaggtgatcaatataattggagcttatcatttatat 20455527  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20455528 tgttgttgaatattatgaggtgattttacattgtcgagtctttgcttgtatgtccatgcatcata 20455592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 19861067 - 19860906
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||| || || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  19861067 tcttatttgaattatgactcgaatg-ttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcctttatat 19860969  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| ||||||| |||||||  |||||||||| ||||| || |||||||||||||||||||||    
T  19860968 tgttgt-aaaaattttgaggtg-gtttgcattgttgagtccttacttgtatgtccatgcatcata 19860906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 21615846 - 21615685
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||| ||||||| || || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  21615846 tcttatttgaaatatgactcgaatg-ttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcctttatat 21615748  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||| |||||||| | |||||||| ||||| || |||||||||||||||||||||    
T  21615747 tgttgtg-aaaattttgaggtga-tctgcattgttgagtccttacttgtatgtccatgcatcata 21615685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 37189461 - 37189623
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||| ||||||||||| || |||||| ||||||||| |||||| |||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  37189461 tcttatttgatttatgacttgaatg-ttgtgtagacgtaaattcttgatgatgcaaatgttgtggaaatgatcaatatatttggaggttgtcctttatat 37189559  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || |||||||| || | |||||||||||||||||||| |||||||||||||||||||    
T  37189560 tgttgt-taatattatgagatggtcttgcattgtcgagtctttgcatgtatgtccatgcatcata 37189623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 431248 - 431111
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaa 167  Q
    |||||||||| || |||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||    
T  431248 tatgacttgaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttgtattgttgtg-aaaa 431151  T
Q  168 ttatgaggtgattttgcattgtcgagtctttgcttgtatg 207  Q
    ||||||| |||| |||||||||||||||||| ||||||||    
T  431150 ttatgagatgatcttgcattgtcgagtctttacttgtatg 431111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 220
Target Start/End: Complemental strand, 3672816 - 3672661
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    ||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  3672816 ttgaattatgagttgatcg-ttgtgtggacgtaaacacttgataatgcaattgttgtggagatgatcaatatacttggaagttgtcctctatattgttgt 3672718  T
Q  162 gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | |||||| ||| ||||| | ||||| |||||||||||| |  ||||||||||||||||    
T  3672717 g-aaaattgtgatgtgatatcgcattatcgagtctttgc-tacatgtccatgcatcata 3672661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 5452148 - 5452309
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||| ||||| | ||||||||||  ||| ||||| ||||||||||||| |||||||||||||||| |||| |||||||||| |||||    
T  5452148 tcttatttgaattatgaattgatcg-ttgtgtggacacaaacacttggtaatgcaattgttctggagatgatcaatatgtttggaagttgtcctctatat 5452246  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||||| ||||||||| | ||||| |||||||||||| |  ||||||||||||||||    
T  5452247 tgttgtg-aaaattgtgaggtgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 5452309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 32967533 - 32967667
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||| |||| |||| | ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |  |||||||  |    
T  32967533 ttgtatggatgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtg--aaagttggaggtga--t 32967628  T
Q  182 tgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| ||||| || |||||||||||||||||||||    
T  32967629 tgcattgttgagtccttacttgtatgtccatgcatcata 32967667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 199
Target Start/End: Complemental strand, 23414057 - 23413918
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||| ||| |||||||||||  || | | | ||||||||||    
T  23414057 tcttaattgaattatgacttgattgattgtgtggacataaatac---ataatgcaattgttgttgaggtgatcaatataaatggaggctatcctttatat 23413961  T
Q  156 tg-ttgtgaaaaattatgaggtgattttgcattgtcgagtctttg 199  Q
    || || |||| | |||||||  |||||||||||||||||||||||    
T  23413960 tgtttttgaatatttatgag--gattttgcattgtcgagtctttg 23413918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 23492833 - 23492676
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||| |||  || ||||||||| |||| | |||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  23492833 tcttatttgaattatgatttgtatg-ttgtgtggatgtaatttcttgataatgaaat-gttgtggagatgatcaatataattggaagttgtcctttatat 23492736  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    ||||||||  ||||| ||| ||||| || |||||||||||||||||||||    
T  23492735 tgttgtgaaaa---ttgaggtga--ttgcactgttgagtccttacttgtatgtccatgcatcata 23492676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 13793939 - 13793803
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattt 181  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||| ||| ||  ||| | | ||    
T  13793939 ttgtgtggacgtaattacttgataatacaattgttgaggagatgatcaatatatttggaagatgtcctttatattattgtg-aaagtttggagatca-tt 13793842  T
Q  182 tgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| ||||| || ||||||||| |||||||||||    
T  13793841 tgcattgttgagtccttacttgtatgttcatgcatcata 13793803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 21108387 - 21108325
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21108387 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 21108325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 28888737 - 28888641
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaa 165  Q
    |||||||||| || |||||||||||||| | ||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  28888737 tatgacttgaatg-ttgtgtggacgtaacttcttgataatgcaaatgtagtggatatgatcaatatatttggaagttgtcctttatattgttgtgaaa 28888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 7727383 - 7727299
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||||||||||||| | ||||||||||||| |||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  7727383 ttgtgtggacgtaatttcttgataatgcaaatgttatggagatgatcaatataattggaagttgtcctttatattgttgtgaaaa 7727299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 37982260 - 37982171
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgt 146  Q
    ||||| || ||||||||||||| || |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||| |||||    
T  37982260 tcttatttaaattatgacttgaatg-ttgtgtggacgtaaatacttgataatgcaattgttgtaaagatgatcaatatacttgaatgttgt 37982171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 23453738 - 23453671
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  23453738 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaa 23453671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 23465243 - 23465176
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  23465243 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaa 23465176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 5622770 - 5622831
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  5622770 tcttaattgaataatgacatg-ttgattgtgtggacgtaaatacttgataatgcaattgttgt 5622831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 19404368 - 19404301
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||| |||||||    
T  19404368 cttgataatgcaaatgtggtggagatgaacaatatatttggaagttgtcctctatattgtggtgaaaa 19404301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 24184586 - 24184653
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  24184586 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 24184653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 6455535 - 6455474
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  6455535 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 6455474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 24082971 - 24082910
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  24082971 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 24082910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 14343091 - 14343158
Alignment:
Q  50 gataattcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||| |||||||||||| ||||| || |||||||||| ||| ||||||||||||||||||||||||||    
T  14343091 gataactcttaattgaataatgacatg-ttgattgtgttgacataaatacttgataatgcaattgttgt 14343158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 11338240 - 11338306
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||||||||||||||||||||||| || || ||||||| |||||||| |||||||    
T  11338240 cttgataatgcaaatgttgtggagatgatcaatatatatggaa-ttgtcctctatattgtggtgaaaa 11338306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 26561128 - 26561189
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| | ||| || |||||||||||||||| ||||||||||||||||||||||||    
T  26561128 tcttaattgaataacgacatg-ttgattgtgtggacgtgaatacttgataatgcaattgttgt 26561189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 29912914 - 29912853
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||| |||| ||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  29912914 tcttaatggaatgatgacatg-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 29912853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 11582662 - 11582595
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| ||| | |||||||| |||||||  |||||||    
T  11582662 cttgataatgcaaatgttgtggagataatcaatataattggatgttgtcctatatattgaggtgaaaa 11582595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 33627725 - 33627783
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgt 115  Q
    |||||||||||| ||||| || |||| |||||||||||||||||| ||||||||||||||    
T  33627725 tcttaattgaataatgacatg-ttgactgtgtggacgtaaatactggataatgcaattgt 33627783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 21224043 - 21224104
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||| ||||||||| |||||| ||||||||||||||||||||    
T  21224043 tcttaattgaataatgacatg-ttggttgtgtggatgtaaatgcttgataatgcaattgttgt 21224104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 24851809 - 24851853
Alignment:
Q  66 attatgacttgattgattgtgtggacgtaaatacttgataatgcaa 111  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24851809 attatgacttg-ttgattgtgtggatgtaaatacttgataatgcaa 24851853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 21108270 - 21108226
Alignment:
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||| | |||||||||||||| |||||||||||||||    
T  21108270 tgattttgcattattgagtctttgcttgtgtgtccatgcatcata 21108226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 22055125 - 22055161
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||| ||||||||||||||||||||||    
T  22055125 ttgtgtggacgtaattacttgataatgcaattgttgt 22055161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 19498586 - 19498529
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    |||||||||||||| ||||||||||||||||||||| |||   |||||||| |||||||    
T  19498586 cttgataatgcaat-gttgtggagatgatcaatataattgggtgttgtcctatatattg 19498529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 18532161 - 18532197
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  18532161 ttgtgtggacgtaattacttaataatgcaattgttgt 18532197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 26561250 - 26561290
Alignment:
Q  180 tttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| | |||| |||||||||||||||||||||||||    
T  26561250 tttgcattattgagtttttgcttgtatgtccatgcatcata 26561290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 27185207 - 27185271
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtga 163  Q
    ||||||||||||| |||||||||||||| ||||||| |||    ||||||| |||||||| ||||    
T  27185207 cttgataatgcaaatgttgtggagatgaacaatataattgggtattgtcctatatattgtggtga 27185271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 145
Target Start/End: Complemental strand, 37982176 - 37982144
Alignment:
Q  113 tgttgtggagatgatcaatatatttgaaagttg 145  Q
    |||||||||||||||||||||||||| ||||||    
T  37982176 tgttgtggagatgatcaatatatttggaagttg 37982144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 24945 - 25107
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||| | || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||     
T  24945 tcttatttgaattatgacttaaatg-ttgtgtggacgtaaatacttgataatgaaattgttgtggagatgatcaatatatttggaagttgtgctttatac 25043  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25044 tgttgtg-aaaagtatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 25107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 130720 - 130558
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||| ||| | ||| ||||||||||    
T  130720 tcttaattgaattatgacttgattg-ttgtgtggacgtaaatacttgataatgcaattgtggttgaggtgatcaatataattggaggttatcctttatat 130622  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  130621 tgttgtg-aatattatgaggtgaatttgcattgtcgagtctttgcttgtatgtccatgcatcata 130558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 106258 - 106367
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||||||||||||| || |||||||||||||| | ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  106258 tcttaattgaattatgacttgaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatataattggaagttgtcctttatat 106356  T
Q  156 tgttgtgaaaa 166  Q
    |||||||||||    
T  106357 tgttgtgaaaa 106367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 108479 - 108319
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||| |||||||  ||| ||||| | | | ||| |||||||||||||| ||||||||||||||||||||  || |||||||||||||    
T  108479 tcttatttgaattatgatttgattg--tgtatggacatgatttcttaataatgcaattgttctggagatgatcaatatatttagaaattgtcctttatat 108382  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||| |||  ||||| ||||||||| | ||||| |||||||||||| |  ||||||||||||||||    
T  108381 tgtggtg-gaaattgtgaggtgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 108319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 85253 - 85091
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||| ||||||||||    
T  85253 tcttaattgaattataacttgattg-ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatatatttggaggttatcctttatat 85155  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    || |||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  85154 tgctgtg-aatattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcttcata 85091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 58 - 217
Target Start/End: Complemental strand, 26389 - 26232
Alignment:
Q  58 ttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||| | ||| ||||||||||||    
T  26389 ttaattgaattatgacttgattg-ttgtgtggacgtaaatacttgataatccaattgttgttgaggtgatcaatataattggaggttatcctttatattg 26291  T
Q  158 ttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatc 217  Q
    || || || |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26290 ttatg-aatattatgaggtgattttccattgtcgagtctttgcttgtatgtccatgcatc 26232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 7e-55; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 21930731 - 21930567
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||  || | ||| ||||||||||    
T  21930731 tcttaattgatttatgacttgattgattgtgtggacgtaaataattgataatgtaattgttgttgaggtgatcaatataaatggaggttatcctttatat 21930632  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||  || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21930631 tgttgttgaatattatgaggtgattttacattgtcgagtctttgcttgtatgtccatgcatcata 21930567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 16135118 - 16134953
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||  |  | ||| ||||||||||    
T  16135118 tcttaattgatttatgacttgattgattgtgtggacgtaaatatttgataatgcaattgttgttgaggtgatcaatataaatagaggttatcctttatat 16135019  T
Q  156 tgttg-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | ||| |||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16135018 tattgttgaatatttatgagatgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 16134953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 22846965 - 22846807
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  22846965 tcttatttgaattatgacttgaatg-ttgtgtggacgtaaatacttgataattcaattgttgtggagataatcaatatatttggaagttatcctttatat 22846867  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcat 216  Q
     |||||| || ||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  22846866 cgttgtg-aagattatgaggtggttttgccttgtcgagtctttgcttgtatgtccttgcat 22846807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 54 - 220
Target Start/End: Complemental strand, 23220537 - 23220371
Alignment:
Q  54 attcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttat 153  Q
    |||||| | ||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||  || | ||| ||||||||    
T  23220537 attcttgactgatttattacttgattgattgtgtggacgtaaatacttgataatgaaattgttgttgggttgatcaatataaatggaggttatcctttat 23220438  T
Q  154 attgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||  || |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  23220437 attgttgttgaatattatgaggtgattttgcattgtcgagtctttgcttgtatttccatgcttcata 23220371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 56 - 197
Target Start/End: Complemental strand, 34965744 - 34965604
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| ||| | ||| ||||||||||    
T  34965744 tcttaattgaattatgacttgattg-ttgtgtgaacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatat 34965646  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctt 197  Q
    ||||||  || ||||||||||||||||||| ||| |||||||    
T  34965645 tgttgttgaatattatgaggtgattttgcaatgttgagtctt 34965604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 77 - 206
Target Start/End: Original strand, 18104826 - 18104955
Alignment:
Q  77 attgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggt 176  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||| | ||| ||||||||||||||||  || |||||||| |    
T  18104826 attgattgtgtggacgtaaatacttgataatgcaattgtttttgaggtgatcaatataattggaggttatcctttatattgttgttgaatattatgagat 18104925  T
Q  177 gattttgcattgtcgagtctttgcttgtat 206  Q
    |||||||||||||||||||||| |||||||    
T  18104926 gattttgcattgtcgagtctttacttgtat 18104955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 15739082 - 15738921
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||| | |||||||||||||| | |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  15739082 tcttatttgaattatgacttgatcg-ttgtgtggacgtaatttcttggtaatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatat 15738984  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||| || ||||||| ||| ||||| | ||||| |||||||||||| |  ||||||||||||||||    
T  15738983 tgtggt-aaaaattgtgaagtgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 15738921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 16889083 - 16889242
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||||| ||||||||| |||| | ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  16889083 tcttatttgaattatgacttgattg-ttgtgtggatgtaatttcttgataatgcaaatgatgtggagatgatcaatatatttggaagttgtcctttatat 16889181  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||  |||||  ||| |||  |||||||||  |||| || |||||||||||||||||||||    
T  16889182 tgttgtg--aaatttggagatga--ttgcattgttaagtccttacttgtatgtccatgcatcata 16889242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 62 - 220
Target Start/End: Original strand, 18383025 - 18383179
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgt 161  Q
    |||||||||||||||| || || |||||| |||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||||||||    
T  18383025 ttgaattatgacttgaatg-ttatgtggatgtaattacttgataatgcaattgttgaggagatgatcaatat-tttggaagttgtcctttgtattgttgt 18383122  T
Q  162 gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||   ||  |||||||||| ||||||| ||||| || |||||||||||| ||||||||    
T  18383123 gaatgtttg-gaggtgattt-gcattgttgagtccttacttgtatgtccaagcatcata 18383179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 25368690 - 25368833
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||| |  ||  ||||||| | | |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  25368690 tcttatttgaattatgacttgatcg--tgcatggacgtgatttcttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatat 25368787  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgct 201  Q
    ||| ||||||| || ||  ||||| | ||||| |||||||||||||    
T  25368788 tgtggtgaaaatttgtggagtgatgtcgcattatcgagtctttgct 25368833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 16375222 - 16375054
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg-tggagatgatcaatatatttgaaagttgtcctttata 154  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| || || || ||||| ||  |||| ||  ||  ||| |    
T  16375222 tcttatttgaattatgacttg-ttgattatgtggacgtaaatacttgataatgcaattgttgttgaagttgctcaatgtaaatgaaggtgatctcttaca 16375124  T
Q  155 ttgttg----tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||    |||| |  |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  16375123 ttgttgttgttgaatatatatgaggtgattttgcattgtcgagtctttgcttatatgttcatgcatcata 16375054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 220
Target Start/End: Original strand, 28196112 - 28196274
Alignment:
Q  54 attcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttat 153  Q
    ||||||| ||||||||| |||||||||  ||| ||||| | | | |||||||||||||||| ||||||||||||||||||||||| |||||||||| |||    
T  28196112 attcttatttgaattataacttgattg--tgtatggacatgatttcttgataatgcaattggtgtggagatgatcaatatatttggaagttgtcctctat 28196209  T
Q  154 attgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||| ||||||| || ||  ||| | | ||||| ||||||||||| ||  ||||||||||||||||    
T  28196210 attgtggtgaaaa-ttgtggagtgttgtcgcattatcgagtctttg-ttacatgtccatgcatcata 28196274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 33323619 - 33323535
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||| ||||||||| | ||||||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  33323619 ttgtatggacgtaatttcttgataatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 33323535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 35137312 - 35137396
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||| ||||||||| | ||||||||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  35137312 ttgtatggacgtaatttcttgataatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 35137396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 31162220 - 31162386
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtgga-gatgatcaatatatttgaaagttgtcctttata 154  Q
    ||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| || | |||||||| ||  || | ||  ||  ||| |    
T  31162220 tcttatttgaattgtgacttg-ttgattgtgtggaagtaaatacttgataatgcaattgttgttgaagttgatcaatgtaaatggaggtgatctcttaca 31162318  T
Q  155 ttgttgt-gaaaaat-tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |   ||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  31162319 ttgttgttgttgaatatatgagatgattttgctttgtcgagtctttgcttgtatgtccatgcatcata 31162386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 11374187 - 11374249
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  11374187 tcttaattgaattatgacttgattgattgtgtggatataaatacttgataatgcaattgttgt 11374249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 19853033 - 19852973
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg 117  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19853033 tcttaattgaattatgacttgattg-ttgtgtggacgtaaatacttgataatgcaattgttg 19852973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 29161846 - 29161908
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  29161846 tcttaatttaattatgactttattgattgtgtggacgtaaatatttgataatgcaattgttgt 29161908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 5485667 - 5485727
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg 117  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5485667 tcttatttgaattatgacttg-ttgattgtgtggacgtaaatacttgataatgcaattgttg 5485727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 17857836 - 17857887
Alignment:
Q  169 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17857836 tatgaggtgatgttgcattgtcgagtctttgcttgtatgtccatgcatcata 17857887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 22866959 - 22866892
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||||||||| |||||||| |||||||    
T  22866959 cttgataatgcaaatgttgtggagatgatcaatttatttggaagttgtcctctatattgtggtgaaaa 22866892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 18630948 - 18631011
Alignment:
Q  54 attcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||| ||||| | |||||||||||||| |||||||||||||||||||||||||||    
T  18630948 attcttaattgaataatgacat-attgattgtgtggatgtaaatacttgataatgcaattgttgt 18631011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 32350938 - 32350877
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  32350938 tcttaattgaataatgacatg-ttgattgtgtggacgtaaatacttggtaatgcaattgttgt 32350877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 32897514 - 32897447
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||||||||| || |||||||||||||||||||| | |||| ||||||||| |||||||| |||||||    
T  32897514 cttgataatgtaaatgttgtggagatgatcaataaaattgagagttgtcctatatattgtggtgaaaa 32897447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 25650007 - 25649946
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||||    
T  25650007 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgcttgataatgcaattgttgt 25649946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 4228620 - 4228680
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg 117  Q
    ||||| ||||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  4228620 tcttatttgaattgtgacttg-ttgattgtgtgtacgtaaatagttgataatgcaattgttg 4228680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 22463467 - 22463507
Alignment:
Q  78 ttgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  22463467 ttgattgtgtggacgtagatacttgataatgcaattgttgt 22463507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 16084207 - 16084148
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    ||||||||||||| || ||||||||||||||||||| |||  ||||||||| ||||||||    
T  16084207 cttgataatgcaaatgatgtggagatgatcaatataattgggagttgtcctatatattgt 16084148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 16105349 - 16105290
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    ||||||||||||| || ||||||||||||||||||| |||  ||||||||| ||||||||    
T  16105349 cttgataatgcaaatgatgtggagatgatcaatataattgggagttgtcctatatattgt 16105290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 18776001 - 18775934
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  18776001 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 18775934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 31627229 - 31627162
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||    ||||||| |||||||| |||||||    
T  31627229 cttgataatgcaaatgttgtggagatgatcaatataattggggattgtcctatatattgtggtgaaaa 31627162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 13622487 - 13622545
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||| |||||||||||| ||||||||| |||  ||||||||| |||||||    
T  13622487 cttgataatgcaaatgttgtggagataatcaatataattgggagttgtcctatatattg 13622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 4173011 - 4173071
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg 117  Q
    ||||| ||||||| ||||||| ||||||||||| | ||||||| ||||||||||||||||||    
T  4173011 tcttatttgaattgtgacttg-ttgattgtgtgtatgtaaatagttgataatgcaattgttg 4173071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 29161964 - 29162008
Alignment:
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||| |  |||||||||||||||||||||||||||||    
T  29161964 tgattttgcattattaagtctttgcttgtatgtccatgcatcata 29162008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 114
Target Start/End: Original strand, 17857741 - 17857776
Alignment:
Q  79 tgattgtgtggacgtaaatacttgataatgcaattg 114  Q
    |||||||||||| |||||||||||||||||||||||    
T  17857741 tgattgtgtggatgtaaatacttgataatgcaattg 17857776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 18431424 - 18431357
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  18431424 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaa 18431357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 18569377 - 18569310
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  18569377 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaa 18569310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 19852979 - 19852944
Alignment:
Q  185 attgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19852979 attgttgagtctttgcttgtatgtccatgcatcata 19852944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 35017055 - 35017122
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  35017055 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaa 35017122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 116
Target Start/End: Original strand, 15006013 - 15006043
Alignment:
Q  86 gtggacgtaaatacttgataatgcaattgtt 116  Q
    |||||||||||||||||||||||||||||||    
T  15006013 gtggacgtaaatacttgataatgcaattgtt 15006043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 15736554 - 15736612
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| |||||||    
T  15736554 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattg 15736612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 18004346 - 18004404
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||    
T  18004346 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 18004404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 29604417 - 29604356
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||| ||| ||||| || ||||||||||||| | ||||| |||||||||||||||||||    
T  29604417 tcttaattaaataatgacatg-ttgattgtgtggatgcaaatatttgataatgcaattgttgt 29604356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 32350807 - 32350770
Alignment:
Q  183 gcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  32350807 gcattatcgagtctttgcttatatgtccatgcatcata 32350770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 5485792 - 5485836
Alignment:
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| || | |||||| |||||||||||||||||||||||||    
T  5485792 tgattttacaatatcgagtttttgcttgtatgtccatgcatcata 5485836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 11374305 - 11374349
Alignment:
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||| | || ||||||||||||||||||| |||||||    
T  11374305 tgattttgcattattgaatctttgcttgtatgtccatacatcata 11374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 14874841 - 14874873
Alignment:
Q  79 tgattgtgtggacgtaaatacttgataatgcaa 111  Q
    |||||||||||| ||||||||||||||||||||    
T  14874841 tgattgtgtggatgtaaatacttgataatgcaa 14874873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 25918538 - 25918471
Alignment:
Q  50 gataattcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||| ||||||||| || ||||| || ||| ||||||||| || ||||||| ||||||||||||||||    
T  25918538 gataactcttaattgtataatgacatg-ttggttgtgtggatgtgaatacttaataatgcaattgttgt 25918471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 9620 - 9454
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg-tggagatgatcaatatatttgaaagttgtcctttata 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||  || | ||| |||||||||    
T  9620 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgttgaagtcgatcaatataaatggaggttatcctttata 9521  T
Q  155 ttgttg-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9520 ttgttgttgaatatttatgaggtgattttacattgtcgagtctttgcttgtatgtccatgcatcata 9454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 44942 - 45107
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||  || | ||| ||||||||||    
T  44942 tcttaattgaattatgacttgattgattgtgtggacgtgaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatat 45041  T
Q  156 tgttgt-gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| |||   |||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  45042 tgttgtggaatgtttatgaggtgattttgcattgtcgagtctttgctagtatgtccatgtatcata 45107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 13947 - 14107
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||  |||||| ||||||||||| ||| ||||||||||||||||    
T  13947 tcttaattgatttatgacttgattg-ttgtgtggacgtaaatacttggtaatgaaattg--gtggaggtgatcaatataattggaagttgtcctttatat 14043  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  14044 tgttgtgaata-ttatgaggtgattttgcattgtcaagtctttgcttgtacgtccatgcatcata 14107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 3640 - 3790
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaa 167  Q
    |||||||||| || |||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  3640 tatgacttgaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtg-aaaa 3737  T
Q  168 ttatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||    
T  3738 ttatgagatgatcttgcattgtcgagtctttacttgtatgtccatgcatcata 3790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 2309 - 2469
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagat-gatcaatatatttgaaagttgtcctttata 154  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||  | ||||||||||  || | ||| |||||||||    
T  2309 tcttaattgaattatgacttgattaattgtgtggac-taaatacttgataatgcaattgttgttgaagtcgatcaatatagatggaggttatcctttata 2407  T
Q  155 ttgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcat 216  Q
    |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2408 ttgttgttgaatattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcat 2469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 34794 - 34958
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||  ||||||||||  || | ||| ||||||||||    
T  34794 tcttaattgaattatgacttgattg-ttgtgtggacgtaaatacttgataatgtaattgttgttgaggagatcaatataaatggaggttatcctttatat 34892  T
Q  156 tgttgt-gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| ||| | ||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34893 tgttgttgaatatttatgaggtgattttgcatttccgagtctttgcttgtatgtccatgcatcata 34958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 78166 - 78328
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  78166 tcttatttgatttatgacttgaatg-ttgtgtggacgtaaattcttgataatgcaattgttgtggagatgatcaatatatttggaggctgtcctttatat 78264  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    | ||||| || |||||||| || | |||||||||||||||||||| |||||||||||||||||||    
T  78265 tattgtg-aatattatgagatggtcttgcattgtcgagtctttgcctgtatgtccatgcatcata 78328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 56 - 218
Target Start/End: Complemental strand, 34303 - 34144
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  34303 tcttatttgaattatgacttgaatg-ttgtgtggacgtaaatacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcctttatat 34205  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatca 218  Q
    |||||||| |  ||  |||||||||| ||||||| ||||| || |||||||||||||||||||    
T  34204 tgttgtgacagtttg-gaggtgattt-gcattgttgagtccttacttgtatgtccatgcatca 34144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 10688 - 10750
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10688 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgatgatgcaattgttgt 10750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 10811 - 10859
Alignment:
Q  172 gaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||    
T  10811 gaggtgattttgcattattgattctttgcttgtatgtccatgcatcata 10859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 521 - 360
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||| | ||| ||||| ||||||| ||    
T  521 tcttaaatgaattatgacttgattg-ttgtgtggacgtaaatacttcataatgcaaatgttgttgagatgatcaatacaattggaagttatcctttacat 423  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||  |  | ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  422 tgttgtgatta--tttgaggtgatgttgcattgtcgagtctttgcttgtatgtccatgcatcata 360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 5576 - 5415
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||| | ||| ||||| ||||||| ||    
T  5576 tcttaaatgaattatgacttgattg-ttgtgtggacgtaaatacttcataatgcaaatgttgttgagatgatcaatacaattggaagttatcctttacat 5478  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||  |  | ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5477 tgttgtgatta--tttgaggtgatgttgcattgtcgagtctttgcttgtatgtccatgcatcata 5415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 4109 - 3948
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||| | ||| ||||| ||||||| ||    
T  4109 tcttaaatgaattatgacttgattg-ttgtgtggacgtaaatacttcataatgcaaatgttgttgagatgatcaatacaattggaagttatcctttacat 4011  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||  |  | ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4010 tgttgtgatta--tttgaggtgatgttgcattgtcgagtctttgcttgtatgtccatgcatcata 3948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 117950 - 118100
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaa 167  Q
    |||||||||| || |||||||||||||| | ||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  117950 tatgacttgaatg-ttgtgtggacgtaatttcttaataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtg-aaaa 118047  T
Q  168 ttatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  118048 ttatgagatgatcttgcattgtcgagtctttacttgtatgtcaatgcatcata 118100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 4779 - 4613
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg-tggagatgatcaatatatttgaaagttgtcctttata 154  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| || ||  ||||||||||  || | ||| |||||||||    
T  4779 tcttaattgatctatgacttgattgattgtgtggacataaatacttgataatgcaattgttgttgaagtcgatcaatatagatggaggttatcctttata 4680  T
Q  155 ttgttg-tgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||| |||  | |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4679 ttgttgttgagtatttatgaggtgattttgcattatcgagtctttgcttgtatgtccatgcatcata 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 5979 - 6122
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||| | | ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||    
T  5979 tcttatttgaattatgacttggtcg-ttgtgtggacgtaaatacttgataatgaaattgttgtggagattatcaatatatttggaagttgtcctctatat 6077  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgct 201  Q
    ||||||| |||||| ||||||||| ||||||| |||||||||||||    
T  6078 tgttgtg-aaaattgtgaggtgatgttgcattatcgagtctttgct 6122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 78510 - 78351
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  78510 tcttatttgaattatgacttgattg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatat 78412  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||  |||||   ||||||  ||||||||| ||||| || ||||||| | |||||||||||    
T  78411 tgttgtg--aaatttgaaggtga--ttgcattgttgagtccttacttgtatattcatgcatcata 78351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 7427 - 7267
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||||| || |||||||||||||| | |||||||||| ||||||||| ||| ||||||||||||||| | ||||||||||||||    
T  7427 tcttatttgaattatgacttgaatg-ttgtgtggacgtaagttcttgataatgtaattgttgtagaggtgatcaatatatttggatgttgtcctttatat 7329  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcat 219  Q
    |||||||  ||||| || |||||| | ||||| |||||||||||| | ||||||||||||||||    
T  7328 tgttgtg-gaaattgtggggtgatgtcgcattatcgagtctttgc-tctatgtccatgcatcat 7267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 7002 - 7159
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    |||||||||||||||||||||| || |||||||||||||| | ||||||||||||| |||||||||||||||||||||| ||  ||||||||||||||||    
T  7002 tcttaattgaattatgacttgaatg-ttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatataatttgaagttgtcctttatat 7100  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||||||    || |||||  ||||||||| ||||| || | |||||||||||||||||||    
T  7101 tgttgtgaaaa---ttggggtga--ttgcattgttgagtccttac-tgtatgtccatgcatcata 7159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 4859 - 4700
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||| |||| ||||||||| |||| | ||||| ||||||  |||||||||||| ||||||||||||| ||||||||||||||||    
T  4859 tcttatttgaattatgacttaattg-ttgtgtggatgtaatttcttgagaatgcagatgttgtggagataatcaatatatttggaagttgtcctttatat 4761  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||  ||| |  |||||||  ||||||||| ||||| || |||||||||||||||||||||    
T  4760 tgttgtg--aaacttggaggtga--ttgcattgttgagtccttacttgtatgtccatgcatcata 4700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 3299 - 3360
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  3299 tcttaattgaataatgacatgat-gattgtgtggacgtaaatacttgataatgtaattgttgt 3360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 20527 - 20367
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||| |  ||| ||||||| | | ||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  20527 tcttatttgaattatgacttgatcg--tgtatggacgtgatttcttgataatgcaattgttgtggatatgatcaatatatttggaagttgtcctctatat 20430  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||| ||| |||||| |||| |||| | ||||| |||||||||||| |  ||||||||||||||||    
T  20429 tgtggtg-aaaattgtgagttgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 20367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 27356 - 27196
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| ||||||||||||||||| |  ||| ||||||| | | ||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  27356 tcttatttgaattatgacttgatcg--tgtatggacgtgatttcttgataatgcaattgttgtggatatgatcaatatatttggaagttgtcctctatat 27259  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||| ||| |||||| |||| |||| | ||||| |||||||||||| |  ||||||||||||||||    
T  27258 tgtggtg-aaaattgtgagttgatgtcgcattatcgagtctttgc-tacatgtccatgcatcata 27196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 4701 - 4848
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaa 167  Q
    |||||||||| || |||||||||||||| | ||||||||||| | |||||||||||||||||||||| ||| |||||||||||||||||||||||||||     
T  4701 tatgacttgaatg-ttgtgtggacgtaatttcttgataatgctaatgttgtggagatgatcaatataattggaagttgtcctttatattgttgtgaaaa- 4798  T
Q  168 ttatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
     |  |||||||  ||||||| | ||||| || ||||||||| |||||||||||    
T  4799 -ttggaggtga--ttgcattattgagtccttacttgtatgttcatgcatcata 4848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 23762 - 23921
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||| |||||||||||||| ||||  | ||||||||||| | ||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||||||    
T  23762 tcttatttgaattatgacttaattgtgt-tgtggacgtaatttcttgataatgcaaatgttatggagataatcaatatatttggaagttgtcctttatat 23860  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||  ||| |  ||| |||  ||||||||| ||||| || ||||||||| |||||||||||    
T  23861 tgttgtg--aaacttggagctga--ttgcattgttgagtccttacttgtatgtacatgcatcata 23921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 11452 - 11390
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11452 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 11390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 3544 - 3450
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtccttt 151  Q
    ||||| ||| |||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  3544 tcttatttggattatgacttgaatg-ttgtgtggacgcaaatacttgataatgaaattgttgtggagatgatcaatatatttggaagttatccttt 3450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 8028 - 8095
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  8028 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtggtgaaaa 8095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 13417 - 13484
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  13417 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtggtgaaaa 13484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 2842 - 2961
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||| ||| |||||| ||| ||||| | ||||| ||||||||||    
T  2842 cttgataataaaattgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtg-aaaattgtgaagtgatgtcgcattatcgagtcttt 2940  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | ||  ||||| ||||||||||    
T  2941 g-ttacatgtctatgcatcata 2961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 6711 - 6551
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatat 155  Q
    ||||||||||||||||| |||||||  ||| ||||| |   | ||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||    
T  6711 tcttaattgaattatgatttgattg--tgtatggacatgttttcttgataattcaaatgttgtggagatgatcaatatatttggaagttgtcctctatat 6614  T
Q  156 tgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||| ||| |||||| |||  |||| | ||||| ||||||||||| ||  ||||||||| ||||||    
T  6613 tgtggtg-aaaattgtgaattgatgtcgcattatcgagtctttg-ttacatgtccatgtatcata 6551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 71641 - 71725
Alignment:
Q  82 ttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    |||| ||||||||| | ||||||||||| | |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  71641 ttgtatggacgtaatttcttgataatgcgaatgttgtggagatgatcaatataattggaaggtgtcctttatattgttgtgaaaa 71725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 2000 - 2067
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2000 cttgataatgcaaatgttgtcgagatgatcaatatatttggaagttgtcctttatattgtggtgaaaa 2067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 30863 - 30796
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||    
T  30863 cttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaa 30796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 69553 - 69494
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgt 158  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| ||||||||    
T  69553 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgt 69494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 98497 - 98558
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||||    
T  98497 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgcttgataatgcaattgttgt 98558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 5530 - 5580
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5530 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataa 5580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 10452 - 10333
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtcttt 198  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||| ||| |||||| |||  |||| | ||||| ||||||||||    
T  10452 cttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtg-aaaattgtgaattgatgtcgcattatcgagtcttt 10354  T
Q  199 gcttgtatgtccatgcatcata 220  Q
    | |   ||||||||||||||||    
T  10353 g-taacatgtccatgcatcata 10333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 19109 - 19170
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  19109 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 19170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 23374 - 23435
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  23374 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 23435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 28685 - 28746
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  28685 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 28746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 12552 - 12384
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattg-ttgtggagatgatcaatatatttgaaagttgtcctttata 154  Q
    ||||| ||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| || || ||||||||||| ||  || | ||  |   ||| |    
T  12552 tcttatttgaattgtgacttg-ttgattgtgtgcacgtaaatacttgataatgcaattgattttgaagatgatcaatgtaaatggaggtgatttcttaca 12454  T
Q  155 ttgttgt----gaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||| |    ||| |  ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  12453 ttgtttttgttgaatatatatgaggtgatcttacattgtcgagtctttgcttgtatgtccatgcatcata 12384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 255872 - 255923
Alignment:
Q  169 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  255872 tatgaggtgatgttgcattgtcgagtctttgcttgtatgtccatgcatcata 255923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 255761 - 255816
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  255761 ttgaattgtgacttgat-gattgtgtggacgtaaatacttgataatgcaattgttgt 255816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 68347 - 68286
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||| | ||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  68347 tcttaattgattaatgacatg-ttgattgtgtggacgtaaatgcttgataatgcaattgttgt 68286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 23807 - 23880
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaa 130  Q
    ||||| ||||||||||| |||| || ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  23807 tcttatttgaattatgaattgaatg-ttgtgtggacgtaaatacttgataatgcaattgatgtgaagatgatcaa 23880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 1132 - 1192
Alignment:
Q  57 cttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  1132 cttaattgaataatgacatg-ttgattgtgtggacgtaaatacttgataatgcaattgttgt 1192  T

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Target: scaffold0750 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 6712 - 6777
Alignment:
Q  101 tgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||| | |||||||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  6712 tgataatgcaaattttgtggagatgatcaatataattggaagttgtcctttatattgtggtgaaaa 6777  T

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Target: scaffold0317 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 15223 - 15284
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg 117  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||    
T  15223 tcttaattgaattatgacttgatggattgtgtggaagtaaatactttataattcaattgttg 15284  T

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Target: scaffold0317; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 15344 - 15393
Alignment:
Q  171 tgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  15344 tgaggtgattttgcattattgagtctttgcttgtatgtccatgcaacata 15393  T

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Target: scaffold0468 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 12449 - 12500
Alignment:
Q  169 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  12449 tatgaggtgattttgcattgctgagtctttgcttgtatgtccatgcatcata 12500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 12339 - 12393
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg 117  Q
    ||||||| ||||||||| | ||||||||| || |||||||||||||||||||||||    
T  12339 ttgaattgtgacttgat-gtttgtgtggatgtgaatacttgataatgcaattgttg 12393  T

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Target: scaffold0190 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 8866 - 8799
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  8866 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 8799  T

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Target: scaffold0103 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 32370 - 32303
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  32370 cttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 32303  T

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Target: scaffold0092 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 2192 - 2087
Alignment:
Q  113 tgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaaattatgaggtgattttgcattgtcgagtctttgcttgtatgtccat 212  Q
    |||||||||||||||||||||||||| |||||||||| |||||||| ||| |||||| |||  |||| | ||||| |||| |||||| ||  ||||||||    
T  2192 tgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtg-aaaattgtgaattgatgtcgcattatcgaatctttg-ttacatgtccat 2095  T
Q  213 gcatcata 220  Q
    ||||||||    
T  2094 gcatcata 2087  T

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Target: scaffold0387 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 2295 - 2356
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  2295 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 2356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 1442 - 1381
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  1442 tcttaattgaataatgacttc-ttgattgtgtggatgtaaatacttgataatgcaattgttgt 1381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 21535 - 21580
Alignment:
Q  171 tgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcat 216  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  21535 tgaggtgattttgcattattgagtctttgcttgtatgtccatgcat 21580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 21413 - 21475
Alignment:
Q  54 attcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttg 117  Q
    ||||||| ||||||| ||| || |||||||||||||||||||||||||||||||  ||||||||    
T  21413 attcttatttgaattgtgattt-attgattgtgtggacgtaaatacttgataataaaattgttg 21475  T

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Target: scaffold1204 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 1554 - 1610
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  1554 ttgaattttgacttgattgattatgtggacgtaattacttgatattgcaattgttgt 1610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 1666 - 1710
Alignment:
Q  176 tgattttgcattgtcgagtctttgcttgtatgtccatgcatcata 220  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||    
T  1666 tgattttgtattattgagtctttgcttgtatgtccatgcatcata 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 105948 - 106004
Alignment:
Q  62 ttgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||    
T  105948 ttgaattatgacttaactgattgtgtggatgtaaatacttgataatgcaaatgttgt 106004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 4917 - 4850
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||||||||||| |||  ||||||||| |||||||| |||||||    
T  4917 cttgataatgcaaatgatgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 4850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 3447 - 3380
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| ||||||||| |||||||||||| |||  ||||||||| |||||||| |||||||    
T  3447 cttgataatgcaaatgttgtggatatgatcaatataattgggagttgtcctatatattgtggtgaaaa 3380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 71826 - 71893
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||||||||||| |||  |||| |||| |||||||| |||||||    
T  71826 cttgataatgcaaatgttgtggagatgatcaatataattgggagttatcctatatattgtggtgaaaa 71893  T

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Target: scaffold1278 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 414 - 353
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    ||||| ||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  414 tcttatttgaattgtgacttgat-gattatgtggacgtaaatactttataatgcaattgttgt 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 13013 - 12936
Alignment:
Q  68 tatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttgaaagttgt 146  Q
    |||||||||| || |||| ||||||||| | ||||||||||| | |||||||||||||||||||||| ||| |||||||    
T  13013 tatgacttgaatg-ttgtatggacgtaatttcttgataatgctaatgttgtggagatgatcaatataattggaagttgt 12936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 12293 - 12232
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||||    
T  12293 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgcttgataatgcaattgttgt 12232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 3412 - 3345
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  3412 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 6020 - 5953
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  6020 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 7580 - 7513
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||| ||||||||||||||||| |||  ||| ||||| |||||||| |||||||    
T  7580 cttgataatgcaaatgttttggagatgatcaatataattgggagtggtcctatatattgtggtgaaaa 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 6595 - 6534
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || |||||||| |||| |||||| ||||||||||||||||||||    
T  6595 tcttaattgaataatgacatg-ttgattgtatggatgtaaattcttgataatgcaattgttgt 6534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 4628 - 4562
Alignment:
Q  100 ttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||| |||||| |||||||||||||||||| ||| |||  ||||||||| |||||||| |||||||    
T  4628 ttgatgatgcaaatgttgtggagatgatcaaaataattgggagttgtcctatatattgtggtgaaaa 4562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 52151 - 52090
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||| ||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||||    
T  52151 tcttaagtgaataatgacatg-ttgattgtgtggatgtaaatgcttgataatgcaattgttgt 52090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 145718 - 145649
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaat--atatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||| | |||||||||||||||||||  |||| || |||||||||| |||||||| |||||||    
T  145718 cttgataatgctaatgttgtggagatgatcaatatatatatggaagttgtcctctatattgtggtgaaaa 145649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 29951 - 29890
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| |||||| |||| |||||||||||||||    
T  29951 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgcttggtaatgcaattgttgt 29890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 198695 - 198756
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||||||||||||| ||||||  |||||||||||||||||||    
T  198695 tcttaattgaataatgacatg-ttgattgtgtggatgtaaatgtttgataatgcaattgttgt 198756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 6334 - 6267
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| |||||||||||| ||||||||| |||   |||||||| |||||||  |||||||    
T  6334 cttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaa 6267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 12985 - 12918
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaa 166  Q
    ||||||||||||| || ||||||||||| ||||||| |||   |||||||| |||||||| |||||||    
T  12985 cttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaa 12918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 21446 - 21411
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatata 134  Q
    ||||||||||||| ||||||||||||||||||||||    
T  21446 cttgataatgcaaatgttgtggagatgatcaatata 21411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 3066 - 3123
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    |||||||||||||| ||||||||||| ||||||||| ||||  |||||||| |||||||    
T  3066 cttgataatgcaat-gttgtggagataatcaatataattgagtgttgtcctatatattg 3123  T

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Target: scaffold0395 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 14466 - 14408
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatattg 157  Q
    ||||||||||||| | |||||||||||||||||||| |||   |||||||| |||||||    
T  14466 cttgataatgcaaatattgtggagatgatcaatataattgggtgttgtcctatatattg 14408  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 1412 - 1473
Alignment:
Q  56 tcttaattgaattatgacttgattgattgtgtggacgtaaatacttgataatgcaattgttgt 118  Q
    |||||||||||| ||||| || ||| ||||||||| |||||| | ||||||||||||||||||    
T  1412 tcttaattgaataatgacatg-ttggttgtgtggatgtaaatgcatgataatgcaattgttgt 1473  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 34138 - 34081
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatatt 156  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| ||||||    
T  34138 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatatt 34081  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 38706 - 38763
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatatt 156  Q
    ||||||||||||| |||||||||||||| ||||||| |||   |||||||| ||||||    
T  38706 cttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatatt 38763  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 95108 - 95051
Alignment:
Q  99 cttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctttatatt 156  Q
    ||||||||||||| |||||||||||| ||||||||| ||||  ||||| || ||||||    
T  95108 cttgataatgcaaatgttgtggagataatcaatataattgagtgttgttctatatatt 95051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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