View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0410_low_24 (Length: 289)

Name: NF0410_low_24
Description: NF0410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0410_low_24
NF0410_low_24
[»] scaffold0796 (2 HSPs)
scaffold0796 (60-242)||(1656-1838)
scaffold0796 (60-242)||(5679-5861)
[»] chr3 (17 HSPs)
chr3 (60-243)||(24933753-24933934)
chr3 (60-171)||(41455092-41455203)
chr3 (60-165)||(9534276-9534382)
chr3 (60-163)||(20247791-20247895)
chr3 (60-165)||(14762758-14762864)
chr3 (60-163)||(38310802-38310906)
chr3 (93-163)||(24192938-24193009)
chr3 (93-166)||(23370505-23370579)
chr3 (60-166)||(10389443-10389550)
chr3 (60-166)||(10414532-10414639)
chr3 (60-166)||(10421202-10421309)
chr3 (114-228)||(13302180-13302292)
chr3 (129-228)||(13312836-13312933)
chr3 (114-228)||(13323727-13323839)
chr3 (102-171)||(16801462-16801531)
chr3 (84-165)||(17240513-17240595)
chr3 (114-165)||(18929249-18929300)
[»] chr6 (18 HSPs)
chr6 (61-243)||(25469630-25469808)
chr6 (60-171)||(12168312-12168423)
chr6 (60-171)||(19287221-19287332)
chr6 (60-171)||(19878405-19878516)
chr6 (60-171)||(19785864-19785975)
chr6 (60-171)||(19884181-19884292)
chr6 (60-166)||(34639986-34640093)
chr6 (60-166)||(34646660-34646767)
chr6 (150-242)||(14581076-14581167)
chr6 (59-171)||(930090-930203)
chr6 (60-165)||(23057887-23057993)
chr6 (85-171)||(18800411-18800498)
chr6 (93-165)||(4477839-4477912)
chr6 (60-171)||(29614141-29614254)
chr6 (60-165)||(23839146-23839253)
chr6 (93-166)||(10986180-10986254)
chr6 (114-171)||(24512838-24512895)
chr6 (114-165)||(9187499-9187550)
[»] chr7 (19 HSPs)
chr7 (60-171)||(12590638-12590749)
chr7 (60-171)||(13007381-13007492)
chr7 (60-171)||(12709838-12709949)
chr7 (60-171)||(13122909-13123020)
chr7 (60-171)||(13743658-13743769)
chr7 (93-169)||(14422966-14423043)
chr7 (60-170)||(18873309-18873420)
chr7 (60-165)||(15168124-15168230)
chr7 (84-165)||(16009549-16009631)
chr7 (93-163)||(16677277-16677348)
chr7 (93-163)||(17651513-17651584)
chr7 (93-161)||(10895795-10895864)
chr7 (114-165)||(11382871-11382922)
chr7 (114-165)||(11389348-11389399)
chr7 (114-171)||(21230954-21231011)
chr7 (114-166)||(20311051-20311103)
chr7 (130-171)||(831628-831669)
chr7 (130-171)||(1196808-1196849)
chr7 (130-171)||(34958578-34958619)
[»] scaffold0129 (1 HSPs)
scaffold0129 (60-171)||(45269-45381)
[»] chr8 (9 HSPs)
chr8 (60-171)||(17054540-17054651)
chr8 (60-171)||(23866564-23866675)
chr8 (60-166)||(44477571-44477678)
chr8 (60-166)||(44492729-44492836)
chr8 (93-163)||(8727735-8727806)
chr8 (84-165)||(23482053-23482135)
chr8 (67-165)||(18614227-18614327)
chr8 (135-179)||(25112001-25112045)
chr8 (135-171)||(14056558-14056594)
[»] chr4 (5 HSPs)
chr4 (60-166)||(53483653-53483760)
chr4 (84-171)||(8045827-8045914)
chr4 (93-171)||(11848095-11848174)
chr4 (114-166)||(15408143-15408195)
chr4 (130-171)||(15747551-15747592)
[»] chr5 (8 HSPs)
chr5 (60-170)||(23528580-23528690)
chr5 (60-171)||(38144531-38144643)
chr5 (60-165)||(28370055-28370161)
chr5 (60-170)||(22751090-22751201)
chr5 (93-165)||(19512368-19512441)
chr5 (84-165)||(18407944-18408026)
chr5 (84-165)||(23111200-23111282)
chr5 (114-166)||(22438747-22438799)
[»] chr2 (8 HSPs)
chr2 (60-166)||(5706023-5706130)
chr2 (84-171)||(26583800-26583887)
chr2 (60-165)||(6483666-6483772)
chr2 (60-165)||(6487133-6487239)
chr2 (60-165)||(19661454-19661560)
chr2 (84-165)||(23265115-23265197)
chr2 (84-165)||(23280183-23280265)
chr2 (114-165)||(21908363-21908414)
[»] chr1 (6 HSPs)
chr1 (60-171)||(41111984-41112095)
chr1 (153-242)||(20044876-20044964)
chr1 (93-165)||(20437024-20437097)
chr1 (84-165)||(32651545-32651627)
chr1 (99-165)||(18712787-18712854)
chr1 (114-165)||(19663517-19663568)
[»] scaffold1773 (1 HSPs)
scaffold1773 (62-171)||(1129-1238)
[»] scaffold0006 (1 HSPs)
scaffold0006 (62-171)||(50130-50239)
[»] scaffold0384 (1 HSPs)
scaffold0384 (114-242)||(15989-16116)
[»] scaffold0026 (2 HSPs)
scaffold0026 (60-171)||(11845-11957)
scaffold0026 (60-166)||(111634-111741)
[»] scaffold0058 (1 HSPs)
scaffold0058 (60-171)||(240-351)
[»] scaffold0117 (2 HSPs)
scaffold0117 (60-171)||(1892-2005)
scaffold0117 (60-171)||(8569-8682)
[»] scaffold0553 (2 HSPs)
scaffold0553 (153-242)||(11008-11096)
scaffold0553 (93-166)||(10195-10269)
[»] scaffold0029 (1 HSPs)
scaffold0029 (60-171)||(111830-111943)
[»] scaffold0154 (1 HSPs)
scaffold0154 (60-171)||(30805-30918)
[»] scaffold0924 (1 HSPs)
scaffold0924 (93-171)||(745-824)
[»] scaffold0247 (1 HSPs)
scaffold0247 (85-171)||(11315-11402)
[»] scaffold0456 (2 HSPs)
scaffold0456 (80-170)||(900-991)
scaffold0456 (80-170)||(8045-8136)
[»] scaffold0025 (1 HSPs)
scaffold0025 (93-163)||(14398-14469)
[»] scaffold0544 (1 HSPs)
scaffold0544 (93-166)||(1525-1599)
[»] scaffold0090 (1 HSPs)
scaffold0090 (102-171)||(18160-18230)
[»] scaffold0020 (1 HSPs)
scaffold0020 (84-165)||(101928-102010)
[»] scaffold0222 (1 HSPs)
scaffold0222 (84-165)||(16793-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (84-165)||(116869-116951)
[»] scaffold0461 (1 HSPs)
scaffold0461 (84-165)||(8-90)
[»] scaffold0146 (1 HSPs)
scaffold0146 (84-165)||(13605-13687)
[»] scaffold0107 (1 HSPs)
scaffold0107 (114-171)||(40526-40583)
[»] scaffold0310 (1 HSPs)
scaffold0310 (114-166)||(17647-17699)
[»] scaffold0019 (1 HSPs)
scaffold0019 (114-166)||(135477-135529)
[»] scaffold0348 (1 HSPs)
scaffold0348 (114-242)||(9339-9467)
[»] scaffold0235 (1 HSPs)
scaffold0235 (114-164)||(22594-22644)
[»] scaffold0815 (1 HSPs)
scaffold0815 (111-180)||(1450-1519)
[»] scaffold0124 (1 HSPs)
scaffold0124 (114-165)||(34276-34327)


Alignment Details
Target: scaffold0796 (Bit Score: 171; Significance: 7e-92; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 1838 - 1656
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1838 catcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatagtctcaccctt 1739  T
Q  160 accttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttggtttctcttgctttctct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1738 accttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttggtttctcttgctttctct 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 5861 - 5679
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5861 catcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatagtctcaccctt 5762  T
Q  160 accttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttggtttctcttgctttctct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5761 accttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttggtttctcttgctttctct 5679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 1e-78; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 24933934 - 24933753
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  24933934 catcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 24933835  T
Q  160 accttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttggtttctcttgctttctctg 243  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  24933834 accttagaattgtaggaagaattaacaccgcaaatcagctcctaagtttt--ccccttgttcttggtttctcttgctttctctg 24933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 41455203 - 41455092
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    ||||||||| |||||||||||||  ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  41455203 catcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 41455104  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  41455103 accttagttttg 41455092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 9534276 - 9534382
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  9534276 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 9534375  T
Q  159 tacctta 165  Q
    |||||||    
T  9534376 tacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 20247895 - 20247791
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||| ||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  20247895 catcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 20247796  T
Q  159 tacct 163  Q
    |||||    
T  20247795 tacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 14762864 - 14762758
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||| ||| |||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||    
T  14762864 catcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcaccct 14762765  T
Q  159 tacctta 165  Q
    |||||||    
T  14762764 tacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 38310906 - 38310802
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaat-ttcaggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||| ||| |||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||    
T  38310906 catcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcaccct 38310807  T
Q  159 tacct 163  Q
    |||||    
T  38310806 tacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 24192938 - 24193009
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacct 163  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  24192938 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 23370579 - 23370505
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttag 166  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  23370579 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 10389550 - 10389443
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtca-atttcaggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||| | |  |||||| ||||||| ||||| || ||||| ||||  || ||||||    
T  10389550 catcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccaccct 10389451  T
Q  159 taccttag 166  Q
    ||||||||    
T  10389450 taccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 10414639 - 10414532
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtca-atttcaggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||| | |  |||||| ||||||| ||||| || ||||| ||||  || ||||||    
T  10414639 catcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccaccct 10414540  T
Q  159 taccttag 166  Q
    ||||||||    
T  10414539 taccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 10421309 - 10421202
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtca-atttcaggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||| | |  |||||| ||||||| ||||| || ||||| ||||  || ||||||    
T  10421309 catcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccaccct 10421210  T
Q  159 taccttag 166  Q
    ||||||||    
T  10421209 taccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 13302292 - 13302180
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttccc 213  Q
    |||||| ||||| | |||||||||||||| ||||  |||||||||||||||||  |||||| || ||  ||||||||||||||| ||||| |||  || |    
T  13302292 tttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaa--aacacagcaaatcagttcctaggttcatctc 13302195  T
Q  214 ccttgttcttggttt 228  Q
    |||||||||||||||    
T  13302194 ccttgttcttggttt 13302180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 13312933 - 13312836
Alignment:
Q  129 attatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttggttt 228  Q
    |||||||||||||| ||||  |||||||||||||||||  |||||| || ||  ||||||||||||||| ||||| |||  || ||||||||||||||||    
T  13312933 attatgattattgaaagataatctcacccttaccttagaattgtagaaaaaa--aacacagcaaatcagttcctaggttcatctcccttgttcttggttt 13312836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 13323839 - 13323727
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttccc 213  Q
    |||||| ||||| | |||||||||||||| ||||  |||||||||||||||||  |||||| || ||  ||  ||||||||||| ||||| ||| ||| |    
T  13323839 tttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaa--aaatcagcaaatcagttcctaggttcttctc 13323742  T
Q  214 ccttgttcttggttt 228  Q
    |||||||||||||||    
T  13323741 ccttgttcttggttt 13323727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 16801531 - 16801462
Alignment:
Q  102 caattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||| |||||||||| ||| ||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  16801531 caatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttg 16801462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 17240595 - 17240513
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||  |||| |||||||||||||| |||||||||||||||||    
T  17240595 ttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 18929249 - 18929300
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||| ||||||| || |||||||||||||||| |||||||||||||||||    
T  18929249 tttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 3e-54; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 61 - 243
Target Start/End: Complemental strand, 25469808 - 25469630
Alignment:
Q  61 atcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctta 160  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  25469808 atcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaatttca-gaattatagattatgattattgagagatagtctcaccctta 25469710  T
Q  161 ccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttgg--tttctcttgctttctctg 243  Q
    ||||||  ||||| |||| ||||||||||| |||| ||||||||||||   ||||||||||||||  ||||||||||||||||||    
T  25469709 ccttag-attgtaagaaggattaacacagc-aatcggctcctaagttt---ccccttgttcttggtttttctcttgctttctctg 25469630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 12168312 - 12168423
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  12168312 catcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 12168411  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  12168412 accttagttttg 12168423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 19287221 - 19287332
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  19287221 catcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 19287320  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  19287321 accttagttttg 19287332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 19878405 - 19878516
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  19878405 catcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 19878504  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  19878505 accttagttttg 19878516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 19785975 - 19785864
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  19785975 catcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 19785876  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  19785875 accttagttttg 19785864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 19884181 - 19884292
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||     
T  19884181 catcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcacccta 19884280  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  19884281 accttagttttg 19884292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 34640093 - 34639986
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||    
T  34640093 catcatcaaaccctaattttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcaccct 34639994  T
Q  159 taccttag 166  Q
    ||||||||    
T  34639993 taccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 34646767 - 34646660
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||    
T  34646767 catcatcaaaccctaattttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcaccct 34646668  T
Q  159 taccttag 166  Q
    ||||||||    
T  34646667 taccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 14581167 - 14581076
Alignment:
Q  150 tctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttggtttctcttgctttctct 242  Q
    |||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||    
T  14581167 tctcacccttaccttagaattgcaggaagaattaacacagcaaaacagctcctaag-ttttcccccttgttattggtttctcttgctttctct 14581076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 930203 - 930090
Alignment:
Q  59 acatcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccc 157  Q
    |||||||||||||||||   |||  |||||||  |||||||| ||||||||||||||| ||| || |||||||||||||||||||||||| |||||||||    
T  930203 acatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagattatgattattgagagatagtctcaccc 930104  T
Q  158 ttaccttagttttg 171  Q
    ||||||||||||||    
T  930103 ttaccttagttttg 930090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 23057887 - 23057993
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||| ||| |||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  23057887 catcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagattatgattatcgagagatagtctcaccct 23057986  T
Q  159 tacctta 165  Q
    |||||||    
T  23057987 tacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 18800411 - 18800498
Alignment:
Q  85 tattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    ||||||| |||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  18800411 tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagttttg 18800498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 4477839 - 4477912
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  4477839 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 29614254 - 29614141
Alignment:
Q  60 catcatcaaaccctaattttcatatta-ttttctaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatggtctcaccc 157  Q
    ||||||||||||||||   |||  ||| ||||| |||| ||| ||| |||||||| |||||| ||||||||||||||||||||||||||| |||||||||    
T  29614254 catcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 29614155  T
Q  158 ttaccttagttttg 171  Q
    ||||||||||||||    
T  29614154 ttaccttagttttg 29614141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 23839146 - 23839253
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaa-actattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccc 157  Q
    ||||||||||||||||   |||  |||| ||| ||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  23839146 catcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 23839245  T
Q  158 ttacctta 165  Q
    ||||||||    
T  23839246 ttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 10986254 - 10986180
Alignment:
Q  93 aaaactattcaattaggtcaatttc-aggaattatagattatgattattgagagatggtctcacccttaccttag 166  Q
    |||||||| |||||||||||||||  || |||||||||||||||||||||| |||| ||||||||||||||||||    
T  10986254 aaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttag 10986180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 24512895 - 24512838
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||||| ||||||| | ||||||||||||||||| |||||||||| ||||||| ||||    
T  24512895 tttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttg 24512838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 9187499 - 9187550
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||| ||||||  |||| |||||||||||||| |||||||||||||||||    
T  9187499 tttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 12590749 - 12590638
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  12590749 catcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 12590650  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  12590649 accttagttttg 12590638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 13007381 - 13007492
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  13007381 catcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 13007480  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  13007481 accttagttttg 13007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 12709949 - 12709838
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    ||||||||||||||||   |||  |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  12709949 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattataaattatgattattgagagatagtctcaccctt 12709850  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  12709849 accttagttttg 12709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 13123020 - 13122909
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    ||||||||||||||||   |||  |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  13123020 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattataaattatgattattgagagatagtctcaccctt 13122921  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  13122920 accttagttttg 13122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 13743658 - 13743769
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    ||||||||||||||||   |||  |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  13743658 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattataaattatgattattgagagatagtctcaccctt 13743757  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  13743758 accttagttttg 13743769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 14422966 - 14423043
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttagttt 169  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14422966 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 18873309 - 18873420
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||| ||| |||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||  ||||||||||    
T  18873309 catcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcaccct 18873408  T
Q  159 taccttagtttt 170  Q
    ||||||||||||    
T  18873409 taccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 15168124 - 15168230
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||| ||| |||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||    
T  15168124 catcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcaccct 15168223  T
Q  159 tacctta 165  Q
    |||||||    
T  15168224 tacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 16009549 - 16009631
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||| ||| ||||| || ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  16009549 ttatcttccaaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 16677277 - 16677348
Alignment:
Q  93 aaaactattcaattaggtcaatttc-aggaattatagattatgattattgagagatggtctcacccttacct 163  Q
    |||||||| |||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||    
T  16677277 aaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 17651513 - 17651584
Alignment:
Q  93 aaaactattcaattaggtcaatttc-aggaattatagattatgattattgagagatggtctcacccttacct 163  Q
    |||||||| |||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||    
T  17651513 aaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 10895864 - 10895795
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttac 161  Q
    |||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||    
T  10895864 aaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 11382922 - 11382871
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  11382922 tttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 11389399 - 11389348
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  11389399 tttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 21231011 - 21230954
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||    
T  21231011 tttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttg 21230954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 20311103 - 20311051
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttag 166  Q
    |||||| |||||||  |||||||||||||||||| ||||||||||||||||||    
T  20311103 tttcagaaattatacgttatgattattgagagatagtctcacccttaccttag 20311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  130 ttatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  130 ttatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  130 ttatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 45381 - 45269
Alignment:
Q  60 catcatcaaaccctaattttcatattatttt-ctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45381 catcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatagtctcaccct 45282  T
Q  159 taccttagttttg 171  Q
    |||||||| ||||    
T  45281 taccttagatttg 45269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 17054540 - 17054651
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17054540 catcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatagtctcaccctt 17054639  T
Q  160 accttagttttg 171  Q
    ||||| ||||||    
T  17054640 accttggttttg 17054651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 23866564 - 23866675
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    ||||||||||||||||   |||  |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  23866564 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattataaattatgattattgagagatagtctcaccctt 23866663  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  23866664 accttagttttg 23866675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 44477571 - 44477678
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  44477571 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 44477670  T
Q  159 taccttag 166  Q
    ||||||||    
T  44477671 taccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 44492729 - 44492836
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  44492729 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 44492828  T
Q  159 taccttag 166  Q
    ||||||||    
T  44492829 taccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 8727806 - 8727735
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacct 163  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||  ||||||||||||||    
T  8727806 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 23482135 - 23482053
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  23482135 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 18614227 - 18614327
Alignment:
Q  67 aaaccctaattttca-tattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctt 164  Q
    ||||||||||| ||| | |||| ||| | ||| |||||||| | ||||||| ||| ||||||| || |||||||||||||||| ||||||||||||||||    
T  18614227 aaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctt 18614326  T
Q  165 a 165  Q
    |    
T  18614327 a 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 25112001 - 25112045
Alignment:
Q  135 attattgagagatggtctcacccttaccttagttttgtaggaaga 179  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||    
T  25112001 attattgagagatagtctcacccttaccttagatttgtagaaaga 25112045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 14056594 - 14056558
Alignment:
Q  135 attattgagagatggtctcacccttaccttagttttg 171  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  14056594 attattgagagatagtctcacccttaccttagatttg 14056558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 53483653 - 53483760
Alignment:
Q  60 catcatcaaaccctaattttcatattatttt-ctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  53483653 catcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatagtctcaccct 53483752  T
Q  159 taccttag 166  Q
    ||||||||    
T  53483753 taccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 8045914 - 8045827
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  8045914 ttattttccaaaactatgcaattaggtcaatttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 8045827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 11848095 - 11848174
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||||||| | | ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11848095 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 11848174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 15408143 - 15408195
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttag 166  Q
    |||||| ||||||| | ||||||||||||||||| ||||||||||||||||||    
T  15408143 tttcagaaattatatactatgattattgagagatagtctcacccttaccttag 15408195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  130 ttatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 4e-44; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 23528580 - 23528690
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  23528580 catcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 23528679  T
Q  160 accttagtttt 170  Q
    |||||||||||    
T  23528680 accttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 38144643 - 38144531
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||||||| |||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  38144643 catcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 38144544  T
Q  159 taccttagttttg 171  Q
    |||||||||||||    
T  38144543 taccttagttttg 38144531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 28370161 - 28370055
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  28370161 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 28370062  T
Q  159 tacctta 165  Q
    |||||||    
T  28370061 tacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 22751090 - 22751201
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||| ||| |||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||  ||||||||||    
T  22751090 catcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcaccct 22751189  T
Q  159 taccttagtttt 170  Q
    ||||||||||||    
T  22751190 taccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 19512368 - 19512441
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  19512368 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 18408026 - 18407944
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  18408026 ttattttcaagaacaattcaattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 23111282 - 23111200
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  23111282 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 22438799 - 22438747
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttag 166  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  22438799 tttcagaaattatacattatgattattgagagatagtctcacccttaccttag 22438747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 5706130 - 5706023
Alignment:
Q  60 catcatcaaaccctaattttcatattatttt-ctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  5706130 catcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaatttcaggaattatagattatgattaatgagagatagtctcaccct 5706031  T
Q  159 taccttag 166  Q
    ||||||||    
T  5706030 taccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 26583800 - 26583887
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26583800 ttattttccaaaactatgcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 26583887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 6483666 - 6483772
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  6483666 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 6483765  T
Q  159 tacctta 165  Q
    |||||||    
T  6483766 tacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 6487133 - 6487239
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  6487133 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 6487232  T
Q  159 tacctta 165  Q
    |||||||    
T  6487233 tacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 19661560 - 19661454
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||| ||| |||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||  ||||||||||    
T  19661560 catcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcaccct 19661461  T
Q  159 tacctta 165  Q
    |||||||    
T  19661460 tacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 23265115 - 23265197
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  23265115 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 23280183 - 23280265
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  23280183 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 21908363 - 21908414
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||| ||||||| || |||||||||||||||| |||||||||||||||||    
T  21908363 tttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 41111984 - 41112095
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  41111984 catcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatagtctcaccctt 41112083  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  41112084 accttagttttg 41112095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 20044964 - 20044876
Alignment:
Q  153 cacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttggtttctcttgctttctct 242  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  20044964 cacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaag-ttttcccccttgttcttgttttctcttgctttctct 20044876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 20437097 - 20437024
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  20437097 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 32651545 - 32651627
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| | |||||||| ||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  32651545 ttattttcaagaacaactcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 18712787 - 18712854
Alignment:
Q  99 attcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||||| ||||||| ||| ||||||| | ||||||||||||||||| ||||||||| |||||||    
T  18712787 attcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 19663568 - 19663517
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||| ||||||| | ||||||||| ||||||| |||||||||||||||||    
T  19663568 tttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 1129 - 1238
Alignment:
Q  62 tcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcacccttac 161  Q
    ||||||||||||||   |||  |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1129 tcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattatagattatgattattgagagatagtctcacccttac 1228  T
Q  162 cttagttttg 171  Q
    ||||||||||    
T  1229 cttagttttg 1238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 50130 - 50239
Alignment:
Q  62 tcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcacccttac 161  Q
    ||||||||||||||   |||  |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50130 tcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattatagattatgattattgagagatagtctcacccttac 50229  T
Q  162 cttagttttg 171  Q
    ||||||||||    
T  50230 cttagttttg 50239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 16116 - 15989
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttccc 213  Q
    |||||| ||| ||| ||||| | |||||| ||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||    
T  16116 tttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaag-ttttccc 16018  T
Q  214 ccttgttcttggtttctcttgctttctct 242  Q
    |||||||||||||||||||||||||||||    
T  16017 ccttgttcttggtttctcttgctttctct 15989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 11957 - 11845
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    |||||||||||||||| | |||  |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  11957 catcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 11858  T
Q  159 taccttagttttg 171  Q
    |||||||||||||    
T  11857 taccttagttttg 11845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 111634 - 111741
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccct 158  Q
    ||||||||||||||||   |||  |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  111634 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccct 111733  T
Q  159 taccttag 166  Q
    ||||||||    
T  111734 taccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 240 - 351
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaatttcaggaattatagattatgattattgagagatggtctcaccctt 159  Q
    ||||||||||||||||   |||  |||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  240 catcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcagaaattatagattatggttattgagagatagtctcaccctt 339  T
Q  160 accttagttttg 171  Q
    ||||||||||||    
T  340 accttagttttg 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 2005 - 1892
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt--caggaattatagattatgattattgagagatggtctcaccc 157  Q
    ||||||||||||||||   ||| ||||||||| |||||||| |||||||||||||||  ||| |||||||||||||||||||||||| || |||||||||    
T  2005 catcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcaccc 1906  T
Q  158 ttaccttagttttg 171  Q
    ||||||||||||||    
T  1905 ttaccttagttttg 1892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 8682 - 8569
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt--caggaattatagattatgattattgagagatggtctcaccc 157  Q
    ||||||||||||||||   ||| ||||||||| |||||||| |||||||||||||||  ||| |||||||||||||||||||||||| || |||||||||    
T  8682 catcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcaccc 8583  T
Q  158 ttaccttagttttg 171  Q
    ||||||||||||||    
T  8582 ttaccttagttttg 8569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 11096 - 11008
Alignment:
Q  153 cacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttggtttctcttgctttctct 242  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  11096 cacccttaccttagaattttaggaagaattaacacagcaaatcagctcctaag-ttttcccccttgttcttgttttctcttgctttctct 11008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 10269 - 10195
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttag 166  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  10269 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 111830 - 111943
Alignment:
Q  60 catcatcaaaccctaattttcatattattttctaaaactattcaattaggtcaattt--caggaattatagattatgattattgagagatggtctcaccc 157  Q
    ||||||||||||||||   |||  |||| ||| |||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||    
T  111830 catcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcaccc 111929  T
Q  158 ttaccttagttttg 171  Q
    ||||||||||||||    
T  111930 ttaccttagttttg 111943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 30805 - 30918
Alignment:
Q  60 catcatcaaaccctaattttca-tattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcaccc 157  Q
    |||||||||||||||||  ||| | |||  ||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  30805 catcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccc 30904  T
Q  158 ttaccttagttttg 171  Q
    ||||||||||||||    
T  30905 ttaccttagttttg 30918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 824 - 745
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  824 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 11315 - 11402
Alignment:
Q  85 tattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    ||||||| |||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11315 tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 11402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 900 - 991
Alignment:
Q  80 catattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttagtttt 170  Q
    |||||||| ||| || ||||| ||||||||||||||| ||| || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  900 catattatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 8045 - 8136
Alignment:
Q  80 catattattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttagtttt 170  Q
    |||||||| ||| || ||||| ||||||||||||||| ||| || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  8045 catattatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

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Target: scaffold0025 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 14469 - 14398
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacct 163  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  14469 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

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Target: scaffold0544 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 1599 - 1525
Alignment:
Q  93 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttag 166  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  1599 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

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Target: scaffold0090 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 18160 - 18230
Alignment:
Q  102 caattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18160 caattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttg 18230  T

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Target: scaffold0020 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 102010 - 101928
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  102010 ttattttcaagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0222 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 16793 - 16875
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  16793 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 116869 - 116951
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  116869 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

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Target: scaffold0461 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 90 - 8
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||  |||| |||||||||||||| |||||||||||||||||    
T  90 ttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0146 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 13605 - 13687
Alignment:
Q  84 ttattttctaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||  |||| |||||||||||||| |||||||||||||||||    
T  13605 ttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 40583 - 40526
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttg 171  Q
    |||||| ||||||| | ||||||||||||||||| |||||||||||||||||| ||||    
T  40583 tttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttg 40526  T

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Target: scaffold0310 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 17647 - 17699
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttag 166  Q
    |||||| ||||||| |||||| |||||||||||| ||||||||||||||||||    
T  17647 tttcagaaattatacattatggttattgagagatagtctcacccttaccttag 17699  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 135477 - 135529
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttag 166  Q
    |||||| ||||||| | ||||||||||||||||| ||||||||||||||||||    
T  135477 tttcagaaattatatactatgattattgagagatagtctcacccttaccttag 135529  T

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Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 9339 - 9467
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaatta-acacagcaaatcagct-cctaagtttttc 211  Q
    |||||| ||||||| ||||||| |||||| ||||  || ||||||||||||||  ||||||  |||   | ||||||||| |||| | |||||||| | |    
T  9339 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgtag--agacagagacacagcaattcagtttcctaagttctcc 9436  T
Q  212 ccccttgttcttggtttctcttgctttctct 242  Q
    |||||||||||||||||||||||||| ||||    
T  9437 ccccttgttcttggtttctcttgcttcctct 9467  T

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Target: scaffold0235 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 22644 - 22594
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttacctt 164  Q
    |||||| ||||||| | ||||||||||||||||| ||||||||||||||||    
T  22644 tttcagaaattatatactatgattattgagagatagtctcacccttacctt 22594  T

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Target: scaffold0815 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 1450 - 1519
Alignment:
Q  111 caatttcaggaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaa 180  Q
    ||||||||| ||||||| |||| ||| |||||||| | ||||||||||||||||| ||||| || |||||    
T  1450 caatttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaaagaa 1519  T

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Target: scaffold0124 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 34327 - 34276
Alignment:
Q  114 tttcaggaattatagattatgattattgagagatggtctcacccttacctta 165  Q
    |||||| ||||||| | ||||||||| ||||||| |||||||||||||||||    
T  34327 tttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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