View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0410_low_28 (Length: 278)

Name: NF0410_low_28
Description: NF0410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0410_low_28
NF0410_low_28
[»] chr6 (25 HSPs)
chr6 (18-194)||(25469630-25469808)
chr6 (91-195)||(12168312-12168418)
chr6 (91-195)||(19287221-19287327)
chr6 (91-195)||(19878405-19878511)
chr6 (91-195)||(19785869-19785975)
chr6 (91-195)||(19884181-19884287)
chr6 (90-195)||(34639985-34640093)
chr6 (90-195)||(34646659-34646767)
chr6 (92-195)||(23057887-23057993)
chr6 (92-163)||(4477839-4477912)
chr6 (91-196)||(930095-930203)
chr6 (92-154)||(23839189-23839253)
chr6 (91-168)||(18800414-18800493)
chr6 (91-168)||(29614146-29614225)
chr6 (90-163)||(10986179-10986254)
chr6 (19-107)||(14581076-14581167)
chr6 (88-136)||(24512840-24512888)
chr6 (92-128)||(9187514-9187550)
chr6 (92-146)||(18659427-18659484)
chr6 (87-126)||(29847275-29847314)
chr6 (87-133)||(1588753-1588799)
chr6 (92-126)||(24441673-24441707)
chr6 (92-122)||(25348512-25348542)
chr6 (92-145)||(28709565-28709619)
chr6 (90-119)||(28288508-28288537)
[»] chr3 (25 HSPs)
chr3 (18-195)||(24933753-24933934)
chr3 (91-195)||(41455097-41455203)
chr3 (92-168)||(9534304-9534382)
chr3 (94-195)||(20247791-20247895)
chr3 (92-195)||(14762758-14762864)
chr3 (94-195)||(38310802-38310906)
chr3 (90-163)||(23370504-23370579)
chr3 (94-163)||(24192938-24193009)
chr3 (90-195)||(10389442-10389550)
chr3 (90-195)||(10414531-10414639)
chr3 (90-195)||(10421201-10421309)
chr3 (92-136)||(18929256-18929300)
chr3 (91-126)||(16801467-16801502)
chr3 (92-157)||(17240513-17240580)
chr3 (87-126)||(23392815-23392854)
chr3 (87-141)||(17513830-17513884)
chr3 (87-127)||(2247645-2247685)
chr3 (87-146)||(52212427-52212489)
chr3 (92-145)||(5842872-5842926)
chr3 (90-128)||(13302239-13302277)
chr3 (90-128)||(13312895-13312933)
chr3 (90-128)||(13323786-13323824)
chr3 (92-141)||(29171853-29171902)
chr3 (87-119)||(13837163-13837195)
chr3 (91-146)||(18366514-18366572)
[»] scaffold0796 (2 HSPs)
scaffold0796 (19-195)||(1656-1838)
scaffold0796 (19-195)||(5679-5861)
[»] scaffold0129 (1 HSPs)
scaffold0129 (88-195)||(45271-45381)
[»] chr7 (24 HSPs)
chr7 (91-195)||(12590643-12590749)
chr7 (91-195)||(13007381-13007487)
chr7 (91-195)||(12709843-12709949)
chr7 (91-195)||(13122914-13123020)
chr7 (91-168)||(13743686-13743764)
chr7 (92-167)||(16009554-16009631)
chr7 (91-163)||(14422966-14423040)
chr7 (92-195)||(15168124-15168230)
chr7 (91-195)||(18873309-18873416)
chr7 (94-163)||(16677277-16677348)
chr7 (94-163)||(17651513-17651584)
chr7 (96-163)||(10895795-10895864)
chr7 (92-136)||(11382871-11382915)
chr7 (92-136)||(11389348-11389392)
chr7 (88-136)||(20311048-20311096)
chr7 (88-136)||(21230956-21231004)
chr7 (89-145)||(41285028-41285085)
chr7 (87-138)||(29005074-29005125)
chr7 (92-122)||(11311083-11311113)
chr7 (87-133)||(15727362-15727408)
chr7 (91-127)||(831633-831669)
chr7 (91-127)||(1196813-1196849)
chr7 (92-136)||(13679504-13679548)
chr7 (91-127)||(34958578-34958614)
[»] chr4 (9 HSPs)
chr4 (90-195)||(53483653-53483761)
chr4 (91-168)||(8045832-8045910)
chr4 (91-137)||(11848123-11848169)
chr4 (89-136)||(15408150-15408197)
chr4 (92-122)||(15069781-15069811)
chr4 (92-122)||(15076381-15076411)
chr4 (92-136)||(8834907-8834951)
chr4 (92-136)||(13888653-13888697)
chr4 (91-127)||(15747556-15747592)
[»] chr5 (11 HSPs)
chr5 (91-195)||(23528580-23528686)
chr5 (92-195)||(28370055-28370161)
chr5 (91-195)||(38144536-38144643)
chr5 (92-163)||(19512368-19512441)
chr5 (91-195)||(22751090-22751197)
chr5 (88-136)||(22438744-22438792)
chr5 (92-157)||(18407944-18408011)
chr5 (92-157)||(23111200-23111267)
chr5 (87-120)||(17021909-17021942)
chr5 (87-146)||(21663138-21663200)
chr5 (87-126)||(22356899-22356938)
[»] chr2 (10 HSPs)
chr2 (90-195)||(5706022-5706130)
chr2 (91-168)||(26583804-26583882)
chr2 (92-168)||(6483694-6483772)
chr2 (92-168)||(6487161-6487239)
chr2 (92-195)||(19661454-19661560)
chr2 (92-157)||(23265130-23265197)
chr2 (92-157)||(23280198-23280265)
chr2 (92-136)||(21908370-21908414)
chr2 (89-145)||(37380503-37380560)
chr2 (87-127)||(19802370-19802410)
[»] chr8 (11 HSPs)
chr8 (93-195)||(17054540-17054644)
chr8 (91-168)||(23866592-23866670)
chr8 (90-168)||(44477599-44477679)
chr8 (90-168)||(44492757-44492837)
chr8 (94-163)||(8727735-8727806)
chr8 (92-157)||(23482053-23482120)
chr8 (92-136)||(18614283-18614327)
chr8 (88-122)||(14056560-14056594)
chr8 (88-122)||(25112001-25112035)
chr8 (92-122)||(39364945-39364975)
chr8 (92-128)||(29643386-29643422)
[»] chr1 (14 HSPs)
chr1 (91-195)||(41111984-41112090)
chr1 (19-142)||(20044876-20045003)
chr1 (92-163)||(20437024-20437097)
chr1 (92-155)||(32651562-32651627)
chr1 (92-157)||(18712787-18712854)
chr1 (87-141)||(7791554-7791608)
chr1 (92-136)||(19663517-19663561)
chr1 (92-122)||(24476350-24476380)
chr1 (92-122)||(25091418-25091448)
chr1 (93-126)||(18271338-18271371)
chr1 (93-126)||(18275992-18276025)
chr1 (94-122)||(10811785-10811813)
chr1 (92-136)||(11158104-11158148)
chr1 (92-136)||(20805332-20805376)
[»] scaffold1773 (1 HSPs)
scaffold1773 (91-168)||(1155-1233)
[»] scaffold0006 (1 HSPs)
scaffold0006 (91-168)||(50156-50234)
[»] scaffold0026 (2 HSPs)
scaffold0026 (91-195)||(11850-11957)
scaffold0026 (90-168)||(111662-111742)
[»] scaffold0058 (1 HSPs)
scaffold0058 (91-168)||(268-346)
[»] scaffold0384 (1 HSPs)
scaffold0384 (19-120)||(15989-16093)
[»] scaffold0154 (1 HSPs)
scaffold0154 (91-167)||(30835-30913)
[»] scaffold0117 (2 HSPs)
scaffold0117 (91-195)||(1897-2005)
scaffold0117 (91-195)||(8574-8682)
[»] scaffold0029 (1 HSPs)
scaffold0029 (91-195)||(111830-111938)
[»] scaffold0247 (1 HSPs)
scaffold0247 (91-168)||(11318-11397)
[»] scaffold0924 (1 HSPs)
scaffold0924 (91-163)||(750-824)
[»] scaffold0553 (2 HSPs)
scaffold0553 (90-163)||(10194-10269)
scaffold0553 (19-104)||(11008-11096)
[»] scaffold0544 (1 HSPs)
scaffold0544 (90-163)||(1524-1599)
[»] scaffold0456 (2 HSPs)
scaffold0456 (91-175)||(900-987)
scaffold0456 (91-175)||(8045-8132)
[»] scaffold0025 (1 HSPs)
scaffold0025 (94-163)||(14398-14469)
[»] scaffold0090 (1 HSPs)
scaffold0090 (91-154)||(18160-18225)
[»] scaffold0310 (1 HSPs)
scaffold0310 (88-136)||(17654-17702)
[»] scaffold0107 (1 HSPs)
scaffold0107 (88-136)||(40528-40576)
[»] scaffold0019 (1 HSPs)
scaffold0019 (88-136)||(135484-135532)
[»] scaffold0222 (1 HSPs)
scaffold0222 (92-157)||(16808-16875)
[»] scaffold0020 (1 HSPs)
scaffold0020 (92-157)||(101928-101995)
[»] scaffold0004 (2 HSPs)
scaffold0004 (92-157)||(116884-116951)
scaffold0004 (93-126)||(60441-60474)
[»] scaffold0235 (1 HSPs)
scaffold0235 (88-136)||(22589-22637)
[»] scaffold0461 (1 HSPs)
scaffold0461 (92-157)||(8-75)
[»] scaffold0146 (1 HSPs)
scaffold0146 (92-157)||(13620-13687)
[»] scaffold0962 (1 HSPs)
scaffold0962 (87-146)||(611-673)
[»] scaffold0124 (1 HSPs)
scaffold0124 (92-136)||(34276-34320)
[»] scaffold0181 (1 HSPs)
scaffold0181 (87-126)||(25516-25555)
[»] scaffold0815 (1 HSPs)
scaffold0815 (92-145)||(1450-1504)
[»] scaffold0679 (1 HSPs)
scaffold0679 (92-145)||(1584-1638)
[»] scaffold0481 (1 HSPs)
scaffold0481 (87-136)||(670-719)
[»] scaffold0023 (1 HSPs)
scaffold0023 (89-126)||(163352-163389)
[»] scaffold0413 (1 HSPs)
scaffold0413 (87-119)||(11683-11715)
[»] scaffold0317 (1 HSPs)
scaffold0317 (92-136)||(1397-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (92-136)||(14997-15041)
[»] scaffold0138 (1 HSPs)
scaffold0138 (92-136)||(12308-12352)
[»] scaffold0071 (1 HSPs)
scaffold0071 (87-119)||(52025-52057)
[»] scaffold0001 (1 HSPs)
scaffold0001 (87-146)||(152106-152166)


Alignment Details
Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 25469630 - 25469808
Alignment:
Q  18 cagagaaagcaagagaaa--ccaagaacaaggggaaaacttaggagccgattgccgtgttaattcttcttacaatctaaggtaagggtgagactatctct 115  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  25469630 cagagaaagcaagagaaaaaccaagaacaaggggaaa-cttaggagccgattgctgtgttaatccttcttacaatctaaggtaagggtgagactatctct 25469728  T
Q  116 caataatcataatctataattctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttgatgat 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25469729 caataatcataatctataattctgaaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgatgat 25469808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 12168418 - 12168312
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 12168319  T
Q  189 gatgatg 195  Q
    |||||||    
T  12168318 gatgatg 12168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 19287327 - 19287221
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 19287228  T
Q  189 gatgatg 195  Q
    |||||||    
T  19287227 gatgatg 19287221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 19878511 - 19878405
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 19878412  T
Q  189 gatgatg 195  Q
    |||||||    
T  19878411 gatgatg 19878405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 19785869 - 19785975
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||| |||||| |||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctagttgaatagttttggaaaataaaatgaaagttagggttt 19785968  T
Q  189 gatgatg 195  Q
    |||||||    
T  19785969 gatgatg 19785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 19884287 - 19884181
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 188  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 19884188  T
Q  189 gatgatg 195  Q
    |||||||    
T  19884187 gatgatg 19884181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 34639985 - 34640093
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttgg-aaataatatgaaaattagggt 186  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  34639985 tctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggt 34640084  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  34640085 ttgatgatg 34640093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 34646659 - 34646767
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttgg-aaataatatgaaaattagggt 186  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||  |||||| |||||||| ||||||||||||    
T  34646659 tctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggt 34646758  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  34646759 ttgatgatg 34646767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 23057993 - 23057887
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt-ctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggttt 188  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  189 gatgatg 195  Q
    |||||||    
T  23057893 gatgatg 23057887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 4477912 - 4477839
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 4477839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 196
Target Start/End: Original strand, 930095 - 930203
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctata-attctg-aaattgacctaattgaatggttttg-gaaataatatgaaaattagggtt 187  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| || ||||||  ||||||  |||   ||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttagggtt 930194  T
Q  188 tgatgatgt 196  Q
    |||||||||    
T  930195 tgatgatgt 930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 23839253 - 23839189
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattg 154  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 23839189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 18800493 - 18800414
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 168  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaa 18800414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 29614146 - 29614225
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 168  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||  |||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaa 29614225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 10986179 - 10986254
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttct-gaaattgacctaattgaatggtttt 163  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||| || |||||    
T  10986179 tctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 10986254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 14581076 - 14581167
Alignment:
Q  19 agagaaagcaagagaaaccaagaacaa-ggggaaaacttaggagccg-attgccgtgttaattcttcttacaa-tctaaggtaagggtgaga 107  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| |  |||| ||||||||||||| | ||| ||||||||||||||||||    
T  14581076 agagaaagcaagagaaaccaataacaagggggaaaacttaggagctgttttgctgtgttaattcttcctgcaattctaaggtaagggtgaga 14581167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 24512840 - 24512888
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    |||||||||| |||||||||||||||||||||||||||| | |||||||    
T  24512840 aatctaaggtgagggtgagactatctctcaataatcatagtatataatt 24512888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 9187550 - 9187514
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataat 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaat 9187514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 18659484 - 18659427
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 146  Q
    ||||||||||||||||||| ||||||||||||||| | |||   ||||||||||||||    
T  18659484 taaggtaagggtgagactaactctcaataatcatagtgtatgtaaattctgaaattga 18659427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 29847275 - 29847314
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcata 126  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  29847275 caatctaaggtaagggtgaggctaactctcaataatcata 29847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 1588799 - 1588753
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataatctata 133  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||    
T  1588799 caatctaaggtaagggtgagactaactctcaatgattatagtctata 1588753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 24441707 - 24441673
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcata 126  Q
    ||||||||||||||||||| |||||||||||||||    
T  24441707 taaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 25348542 - 25348512
Alignment:
Q  92 taaggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataat 25348512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 28709619 - 28709565
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcat-aatctataattctgaaattg 145  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||||||||||||    
T  28709619 taaggtaagggtgagactatcattcaatgatcttaaatctataattctgaaattg 28709565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 28288508 - 28288537
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaat 119  Q
    ||||||||||||||||||||||||||||||    
T  28288508 tctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 8e-70; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 24933753 - 24933934
Alignment:
Q  18 cagagaaagcaagagaaaccaagaacaaggggaaaacttaggagccgatt-gccgtgttaattcttcttacaat-ctaaggtaagggtgagactatctct 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||| |||||| |||||||||||||||||||||||||    
T  24933753 cagagaaagcaagagaaaccaagaacaaggggaaaacttaggagctgatttgcggtgttaattcttcctacaattctaaggtaagggtgagactatctct 24933852  T
Q  116 caataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttgatgatg 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  24933853 caataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgatgatg 24933934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 41455097 - 41455203
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||  ||||||||||||| ||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataggatgaaaattagggatt 41455196  T
Q  189 gatgatg 195  Q
    |||||||    
T  41455197 gatgatg 41455203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 9534382 - 9534304
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 9534304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 20247791 - 20247895
Alignment:
Q  94 aggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggtttga 190  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  191 tgatg 195  Q
    |||||    
T  20247891 tgatg 20247895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 14762758 - 14762864
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggttt 188  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  189 gatgatg 195  Q
    |||||||    
T  14762858 gatgatg 14762864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 38310802 - 38310906
Alignment:
Q  94 aggtaagggtgagactatctctcaataatcataatctataa-ttctgaa-attgacctaattgaatggttttggaa-ataatatgaaaattagggtttga 190  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||| || ||||||||| ||||  |||   |||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  191 tgatg 195  Q
    |||||    
T  38310902 tgatg 38310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 23370504 - 23370579
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  23370504 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 23370579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 24193009 - 24192938
Alignment:
Q  94 aggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 24192938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 10389442 - 10389550
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaat-tgacctaattgaatggttttgga-aataatatgaaaattagggt 186  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||| ||||||  | | |||||||||| |||||  | ||||||||||||||||||||    
T  10389442 tctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggt 10389541  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  10389542 ttgatgatg 10389550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 10414531 - 10414639
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaat-tgacctaattgaatggttttgga-aataatatgaaaattagggt 186  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||| ||||||  | | |||||||||| |||||  | ||||||||||||||||||||    
T  10414531 tctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggt 10414630  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  10414631 ttgatgatg 10414639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 10421201 - 10421309
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaat-tgacctaattgaatggttttgga-aataatatgaaaattagggt 186  Q
    ||||||||||||||| || ||||| ||||| || ||||| ||||||| ||||||  | | |||||||||| |||||  | ||||||||||||||||||||    
T  10421201 tctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggt 10421300  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  10421301 ttgatgatg 10421309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 18929300 - 18929256
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatt 18929256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 16801467 - 16801502
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcata 126  Q
    ||||||||||||||||||||||||||||||||||||    
T  16801467 ctaaggtaagggtgagactatctctcaataatcata 16801502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 17240513 - 17240580
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    |||||||||||||||||||||||||||||||| ||||  |||| ||||| ||||||| ||||||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaat 17240580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 23392815 - 23392854
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcata 126  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  23392815 caatctaaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 17513884 - 17513830
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataatctataattctgaa 141  Q
    |||||||||||||||||||||||| | |||| |||||||| | ||||||||||||    
T  17513884 caatctaaggtaagggtgagactaacactcagtaatcatagtgtataattctgaa 17513830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 2247645 - 2247685
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataa 127  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  2247645 caatctaaggtaagggtgagactaactctcaataattataa 2247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 52212427 - 52212489
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 146  Q
    |||||||||||||||||||| ||| ||||||||||||||| | |||   ||||||||||||||    
T  52212427 caatctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattga 52212489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 5842926 - 5842872
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcat-aatctataattctgaaattg 145  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||||||||||||    
T  5842926 taaggtaagggtgagactatcattcaatgatcttaaatctataattctgaaattg 5842872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 13302239 - 13302277
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataat 128  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  13302239 tctaaggtaagggtgagattatctttcaataatcataat 13302277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 13312895 - 13312933
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataat 128  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  13312895 tctaaggtaagggtgagattatctttcaataatcataat 13312933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 13323786 - 13323824
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataat 128  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  13323786 tctaaggtaagggtgagattatctttcaataatcataat 13323824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 29171853 - 29171902
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataattctgaa 141  Q
    ||||||||||||||||||| | |||| |||||||| | ||||||||||||    
T  29171853 taaggtaagggtgagactaacactcagtaatcatagtgtataattctgaa 29171902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 13837195 - 13837163
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaat 119  Q
    |||||||||||||||||||||||| ||||||||    
T  13837195 caatctaaggtaagggtgagactaactctcaat 13837163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 18366514 - 18366572
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 146  Q
    |||||||||||||||| ||| ||||||||||||||| | |||   ||||||||||||||    
T  18366514 ctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattga 18366572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 1656 - 1838
Alignment:
Q  19 agagaaagcaagagaaaccaagaacaagggg--aaaacttaggagccgatt-gccgtgttaattcttcttacaat-ctaaggtaagggtgagactatctc 114  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||| || ||||||||||||| |||||  ||||||||||||||||||||||||    
T  1656 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctc 1755  T
Q  115 tcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttgatgatg 195  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  1756 tcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatgatg 1838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 5679 - 5861
Alignment:
Q  19 agagaaagcaagagaaaccaagaacaagggg--aaaacttaggagccgatt-gccgtgttaattcttcttacaat-ctaaggtaagggtgagactatctc 114  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||| || ||||||||||||| |||||  ||||||||||||||||||||||||    
T  5679 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctc 5778  T
Q  115 tcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttgatgatg 195  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  5779 tcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatgatg 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 45271 - 45381
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg--aaataatatgaaaattagg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  |||||||||||||||||||    
T  45271 aatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgaatagtttttgaaaaataatatgaaaattagg 45370  T
Q  185 gtttgatgatg 195  Q
    |||||||||||    
T  45371 gtttgatgatg 45381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 12590643 - 12590749
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataatatgaaagttagggttt 12590742  T
Q  189 gatgatg 195  Q
    |||||||    
T  12590743 gatgatg 12590749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 13007487 - 13007381
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 13007388  T
Q  189 gatgatg 195  Q
    |||||||    
T  13007387 gatgatg 13007381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 12709843 - 12709949
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataattc-tgaaattgacctaattgaatggttttggaaa-taatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||| |||  |||   |||||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 12709942  T
Q  189 gatgatg 195  Q
    |||||||    
T  12709943 gatgatg 12709949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 13122914 - 13123020
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataattc-tgaaattgacctaattgaatggttttggaaa-taatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||| |||  |||   |||||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 13123013  T
Q  189 gatgatg 195  Q
    |||||||    
T  13123014 gatgatg 13123020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 13743764 - 13743686
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttggaaa 168  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaa 13743686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 16009631 - 16009554
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa 167  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaa 16009554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 14423040 - 14422966
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 14422966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 15168230 - 15168124
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggttt 188  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  189 gatgatg 195  Q
    |||||||    
T  15168130 gatgatg 15168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 18873416 - 18873309
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggtt 187  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  18873416 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 18873317  T
Q  188 tgatgatg 195  Q
    ||||||||    
T  18873316 tgatgatg 18873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 16677348 - 16677277
Alignment:
Q  94 aggtaagggtgagactatctctcaataatcataatctataa-ttct-gaaattgacctaattgaatggtttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||| || |||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 16677277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 17651584 - 17651513
Alignment:
Q  94 aggtaagggtgagactatctctcaataatcataatctataa-ttct-gaaattgacctaattgaatggtttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||| || |||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 17651513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 10895795 - 10895864
Alignment:
Q  96 gtaagggtgagactatctctcaataatcataatctataattct--gaaattgacctaattgaatggtttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||| || |||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttt 10895864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 11382871 - 11382915
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatt 11382915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 11389348 - 11389392
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatt 11389392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 20311048 - 20311096
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  20311048 aatctaaggtaagggtgagactatctctcaataatcataacgtataatt 20311096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 21230956 - 21231004
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  21230956 aatctaaggtaagggtgagactatctctcaataatcatagtatataatt 21231004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 41285085 - 41285028
Alignment:
Q  89 atctaaggtaagggtgagactatctctcaataatcataa-tctataattctgaaattg 145  Q
    ||||||||||||||||||||||||  ||| | ||||||| ||||||||||||||||||    
T  41285085 atctaaggtaagggtgagactatcattcagtgatcataagtctataattctgaaattg 41285028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 29005125 - 29005074
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataatctataattct 138  Q
    |||||||||||||||||||||||| | |||| |||||||| | |||||||||    
T  29005125 caatctaaggtaagggtgagactaacactcagtaatcatagtatataattct 29005074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 11311113 - 11311083
Alignment:
Q  92 taaggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||||    
T  11311113 taaggtaagggtgagactatctctcaataat 11311083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 15727362 - 15727408
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataatctata 133  Q
    |||||||||||||||||||||||| |||||||| || ||| ||||||    
T  15727362 caatctaaggtaagggtgagactaactctcaatgattatagtctata 15727408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 831633 - 831669
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataa 127  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  831633 ctaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 1196813 - 1196849
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataa 127  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  1196813 ctaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 13679548 - 13679504
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatt 13679504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 34958614 - 34958578
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataa 127  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  34958614 ctaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 9e-39; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 53483761 - 53483653
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg--aaataatatgaaaattagggt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  |||||||||||||||||||||    
T  53483761 tctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  53483661 ttgatgatg 53483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 8045832 - 8045910
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttggaaa 168  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaattgacctaattgcatagttttggaaa 8045910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 11848169 - 11848123
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataattc 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattc 11848123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 15408197 - 15408150
Alignment:
Q  89 atctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||    
T  15408197 atctaaggtaagggtgagactatctctcaataatcatagtatataatt 15408150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 15069811 - 15069781
Alignment:
Q  92 taaggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||||    
T  15069811 taaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 15076411 - 15076381
Alignment:
Q  92 taaggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||||    
T  15076411 taaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 8834951 - 8834907
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatt 8834907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 13888697 - 13888653
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatt 13888653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 15747556 - 15747592
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataa 127  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  15747556 ctaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 23528686 - 23528580
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggttt 23528587  T
Q  189 gatgatg 195  Q
    |||||||    
T  23528586 gatgatg 23528580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 28370055 - 28370161
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaa-ttgacctaattgaatggttttggaaa-taatatgaaaattagggttt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| || |||||||||| |||  |||   |||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  189 gatgatg 195  Q
    |||||||    
T  28370155 gatgatg 28370161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 38144536 - 38144643
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaa-ttgacctaattgaatggttttggaaa-taatatgaaaattagggtt 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||  ||||||||| |||  |||   ||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 38144635  T
Q  188 tgatgatg 195  Q
    ||||||||    
T  38144636 tgatgatg 38144643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 19512441 - 19512368
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 19512368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 22751197 - 22751090
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggtt 187  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  22751197 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 22751098  T
Q  188 tgatgatg 195  Q
    ||||||||    
T  22751097 tgatgatg 22751090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 22438744 - 22438792
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22438744 aatctaaggtaagggtgagactatctctcaataatcataatgtataatt 22438792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 18407944 - 18408011
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaat 18408011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 23111200 - 23111267
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 23111267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 120
Target Start/End: Original strand, 17021909 - 17021942
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaata 120  Q
    ||||||||||||||||||||||||||||||||||    
T  17021909 caatctaaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 21663138 - 21663200
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 146  Q
    |||||||||||||||||||| ||| ||||||||||||||| | |||   ||||||||||||||    
T  21663138 caatctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattga 21663200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 22356899 - 22356938
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcata 126  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  22356899 caatctaaggtaagggtgaggctaactctcaataatcata 22356938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 5706022 - 5706130
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg--aaataatatgaaaattagggt 186  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |  |||||||||||||||||||||    
T  5706022 tctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaattgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  5706122 ttgatgatg 5706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 26583882 - 26583804
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttggaaa 168  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgcatagttttggaaa 26583804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 6483772 - 6483694
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 6483694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 6487239 - 6487161
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 6487161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 19661454 - 19661560
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa-ataatatgaaaattagggttt 188  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   |||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  189 gatgatg 195  Q
    |||||||    
T  19661554 gatgatg 19661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 23265197 - 23265130
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 23265130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 23280265 - 23280198
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 23280198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 21908414 - 21908370
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatt 21908370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 37380560 - 37380503
Alignment:
Q  89 atctaaggtaagggtgagactatctctcaataatcataa-tctataattctgaaattg 145  Q
    ||||||||||||||||||||||||  ||| | ||| ||| ||||||||||||||||||    
T  37380560 atctaaggtaagggtgagactatcattcagtgatcttaagtctataattctgaaattg 37380503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 19802410 - 19802370
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataa 127  Q
    ||||| |||||||||||||||||| ||||||||||| ||||    
T  19802410 caatcaaaggtaagggtgagactaactctcaataattataa 19802370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 9e-36; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 17054644 - 17054540
Alignment:
Q  93 aaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttgg-aaataatatgaaaattagggtttga 190  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| |||||| |||||||||||    
T  17054644 aaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataagatgaaagttagggtttga 17054545  T
Q  191 tgatg 195  Q
    |||||    
T  17054544 tgatg 17054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 23866670 - 23866592
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttggaaa 168  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaa 23866592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 44477679 - 44477599
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  44477679 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 44477599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 44492837 - 44492757
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  44492837 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 44492757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 8727735 - 8727806
Alignment:
Q  94 aggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    |||||||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 8727806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 23482053 - 23482120
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 23482120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 18614327 - 18614283
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatt 18614283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 14056560 - 14056594
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||||||||    
T  14056560 aatctaaggtaagggtgagactatctctcaataat 14056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 25112035 - 25112001
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||||||||    
T  25112035 aatctaaggtaagggtgagactatctctcaataat 25112001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 39364975 - 39364945
Alignment:
Q  92 taaggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataat 39364945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 29643386 - 29643422
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataat 128  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataat 29643422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 41112090 - 41111984
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttg-gaaataatatgaaaattagggttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||| |||||| |||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttgaaaaataagatgaaagttagggttt 41111991  T
Q  189 gatgatg 195  Q
    |||||||    
T  41111990 gatgatg 41111984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 20044876 - 20045003
Alignment:
Q  19 agagaaagcaagagaaaccaagaacaa-ggggaaaacttaggagccga-ttgccgtgttaattcttcttacaa-tctaaggtaagggtgagactatctct 115  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| || |||| ||||||||||||| ||||| ||||||||||||||| || ||||  |    
T  20044876 agagaaagcaagagaaaacaagaacaagggggaaaacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatcctt 20044975  T
Q  116 caataatcataatctat-aattctgaaa 142  Q
    |||| ||| |||| ||| ||||||||||    
T  20044976 caatgatcttaatatataaattctgaaa 20045003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 20437024 - 20437097
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 20437097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 32651627 - 32651562
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattga 155  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattga 32651562  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 18712854 - 18712787
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    ||||||| ||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 18712787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 7791554 - 7791608
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataatctataattctgaa 141  Q
    |||||||||||||||||||||||| | |||| |||||||| | ||||||||||||    
T  7791554 caatctaaggtaagggtgagactaacactcagtaatcatagtgtataattctgaa 7791608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 19663517 - 19663561
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatt 19663561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 24476380 - 24476350
Alignment:
Q  92 taaggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||||    
T  24476380 taaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 122
Target Start/End: Original strand, 25091418 - 25091448
Alignment:
Q  92 taaggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  93 aaggtaagggtgagactatctctcaataatcata 126  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  93 aaggtaagggtgagactatctctcaataatcata 126  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 10811785 - 10811813
Alignment:
Q  94 aggtaagggtgagactatctctcaataat 122  Q
    |||||||||||||||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataat 10811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 11158148 - 11158104
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||| |||||||| ||| |||| |||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatt 11158104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 20805376 - 20805332
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatt 20805332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 1233 - 1155
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttggaaa 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  1233 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgcatagttttggaaa 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 50234 - 50156
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataatt-ctgaaattgacctaattgaatggttttggaaa 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgcatagttttggaaa 50156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 11850 - 11957
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttgg-aaataatatgaaaattagggtt 187  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||| ||||||  ||| | ||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttagggtt 11949  T
Q  188 tgatgatg 195  Q
    ||||||||    
T  11950 tgatgatg 11957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 111742 - 111662
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  111742 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaa 111662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 346 - 268
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattgacctaattgaatggttttggaaa 168  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctgaaattgacctaattgcatagttttggaaa 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 15989 - 16093
Alignment:
Q  19 agagaaagcaagagaaaccaagaacaa-ggggaaaacttaggagccga-ttgccgtgttaattcttcttacaa-tctaaggtaagggtgagactatctct 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||||||||| ||||| ||||||||||||||| || ||||| |    
T  15989 agagaaagcaagagaaaccaagaacaagggggaaaacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatcttt 16088  T
Q  116 caata 120  Q
    |||||    
T  16089 caata 16093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 30913 - 30835
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaa 167  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaa 30835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 1897 - 2005
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg--aaattgacctaattgaatggttttgg-aaataatatgaaaattagggt 186  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||| || ||||||| ||||||| |||   |||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 1996  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  1997 ttgatgatg 2005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 8574 - 8682
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg--aaattgacctaattgaatggttttgg-aaataatatgaaaattagggt 186  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||| || ||||||| ||||||| |||   |||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 8673  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  8674 ttgatgatg 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 111938 - 111830
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg--aaattgacctaattgaatggttttggaa-ataatatgaaaattagggt 186  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||| || ||||||||| ||||  |||   |||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggttagggt 111839  T
Q  187 ttgatgatg 195  Q
    |||||||||    
T  111838 ttgatgatg 111830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 11397 - 11318
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaa 168  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaa 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 750 - 824
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 10194 - 10269
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  10194 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 10269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 11008 - 11096
Alignment:
Q  19 agagaaagcaagagaaaccaagaacaa-ggggaaaacttaggagccga-ttgccgtgttaattcttcttacaa-tctaaggtaagggtg 104  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| || |||| ||||||||||||| || || |||||||||||||||    
T  11008 agagaaagcaagagaaaacaagaacaagggggaaaacttaggagctgatttgctgtgttaattcttcctaaaattctaaggtaagggtg 11096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 1524 - 1599
Alignment:
Q  90 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  1524 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 987 - 900
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctata-attctg-aaattgacctaattgaatggttttggaa-ataatatg 175  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| || || |||||| ||||||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataatatg 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 8132 - 8045
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctata-attctg-aaattgacctaattgaatggttttggaa-ataatatg 175  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| || || |||||| ||||||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataatatg 8045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 14398 - 14469
Alignment:
Q  94 aggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggtttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 14469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 18225 - 18160
Alignment:
Q  91 ctaaggtaagggtgagactatctctcaataatcataatctataattct--gaaattgacctaattg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattg 18160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 17702 - 17654
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  17702 aatctaaggtaagggtgagactatctctcaataaccataatgtataatt 17654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 40528 - 40576
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  40528 aatctaaggtaagggtgagactatctctcaataatcatagtatataatt 40576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 135532 - 135484
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  135532 aatctaaggtaagggtgagactatctctcaataatcatagtatataatt 135484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 16875 - 16808
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 16808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 101928 - 101995
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt-ctg-aaattgacctaattgaat 157  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||||| ||||||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaat 101995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 116951 - 116884
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| ||||||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 116884  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  93 aaggtaagggtgagactatctctcaataatcata 126  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

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Target: scaffold0235 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 22589 - 22637
Alignment:
Q  88 aatctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    |||| |||||||||||||||||||||||||||||||||| | |||||||    
T  22589 aatccaaggtaagggtgagactatctctcaataatcatagtatataatt 22637  T

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Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 8 - 75
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    |||||||||||||||||||||||||||||||| ||||  |||| ||||| ||||||| ||||||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaat 75  T

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Target: scaffold0146 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 13687 - 13620
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaat 157  Q
    |||||||||||||||||||||||||||||||| ||||  |||| ||||| ||||||| ||||||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaat 13620  T

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Target: scaffold0962 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 611 - 673
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataatctat---aattctgaaattga 146  Q
    |||||||||||||||||||| ||| ||||||||||||||| | |||   ||||||||||||||    
T  611 caatctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattga 673  T

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Target: scaffold0124 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 34276 - 34320
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatt 34320  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 25516 - 25555
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcata 126  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  25516 caatctaaggtaagggtgaggctaactctcaataatcata 25555  T

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Target: scaffold0815 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 1504 - 1450
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataa-ttctgaaattg 145  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||| |||||||||||    
T  1504 taaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaattg 1450  T

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Target: scaffold0679 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 1584 - 1638
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcat-aatctataattctgaaattg 145  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||||||||||||    
T  1584 taaggtaagggtgagactatcattcaatgatcttaaatctataattctgaaattg 1638  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 670 - 719
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||| |||||||||||||||||| |||||||| ||| |||| |||||||    
T  670 caatcaaaggtaagggtgagactaactctcaatgatcttaatgtataatt 719  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 163389 - 163352
Alignment:
Q  89 atctaaggtaagggtgagactatctctcaataatcata 126  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  163389 atctaaggtaagggtgaggctaactctcaataatcata 163352  T

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Target: scaffold0413 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 11715 - 11683
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaat 119  Q
    |||||||||||||||||||||||| ||||||||    
T  11715 caatctaaggtaagggtgagactaactctcaat 11683  T

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Target: scaffold0317 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 1441 - 1397
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatt 1397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 14997 - 15041
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||||||| |||||||| ||| |||| |||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatt 15041  T

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Target: scaffold0138 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 12352 - 12308
Alignment:
Q  92 taaggtaagggtgagactatctctcaataatcataatctataatt 136  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatt 12308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 52057 - 52025
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaat 119  Q
    |||||||||||||||||||||||| ||||||||    
T  52057 caatctaaggtaagggtgagactaactctcaat 52025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 152106 - 152166
Alignment:
Q  87 caatctaaggtaagggtgagactatctctcaataatcataa-tctataattctgaaattga 146  Q
    |||||||||||||||||| |||||||  ||| ||||| ||| | |||||||||||||||||    
T  152106 caatctaaggtaagggtgggactatcattcagtaatcttaagtttataattctgaaattga 152166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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