View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0412_high_125 (Length: 276)

Name: NF0412_high_125
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0412_high_125
NF0412_high_125
[»] chr1 (20 HSPs)
chr1 (88-179)||(40172518-40172609)
chr1 (85-148)||(36472647-36472710)
chr1 (88-173)||(44751953-44752038)
chr1 (104-181)||(40009041-40009120)
chr1 (82-148)||(18635713-18635779)
chr1 (81-175)||(10799194-10799288)
chr1 (87-180)||(45443448-45443536)
chr1 (81-145)||(32336736-32336800)
chr1 (81-136)||(38487782-38487837)
chr1 (81-139)||(16934338-16934396)
chr1 (81-146)||(43183741-43183807)
chr1 (81-147)||(52678863-52678929)
chr1 (81-138)||(11098944-11099001)
chr1 (85-145)||(6871196-6871256)
chr1 (81-116)||(49294533-49294568)
chr1 (92-185)||(43225512-43225606)
chr1 (75-105)||(50838794-50838824)
chr1 (104-192)||(5267937-5268027)
chr1 (83-131)||(27845415-27845463)
chr1 (83-131)||(28308444-28308492)
[»] chr8 (13 HSPs)
chr8 (83-172)||(14239243-14239333)
chr8 (96-146)||(12020069-12020119)
chr8 (85-132)||(5431627-5431674)
chr8 (82-175)||(36665254-36665347)
chr8 (86-139)||(12136496-12136549)
chr8 (83-144)||(26055447-26055508)
chr8 (95-177)||(36548361-36548445)
chr8 (81-148)||(34453773-34453840)
chr8 (79-113)||(5589560-5589594)
chr8 (81-123)||(10995345-10995387)
chr8 (88-147)||(24289172-24289235)
chr8 (83-125)||(36772822-36772864)
chr8 (80-129)||(20472381-20472430)
[»] chr4 (20 HSPs)
chr4 (84-175)||(2097082-2097173)
chr4 (81-148)||(8456800-8456867)
chr4 (80-173)||(25391011-25391104)
chr4 (86-138)||(5251890-5251942)
chr4 (81-148)||(30979818-30979885)
chr4 (89-175)||(38020376-38020462)
chr4 (87-175)||(38272947-38273033)
chr4 (81-129)||(29728814-29728862)
chr4 (111-181)||(6478420-6478490)
chr4 (82-148)||(38450695-38450761)
chr4 (91-176)||(41594022-41594107)
chr4 (82-148)||(42687614-42687680)
chr4 (91-146)||(20228273-20228328)
chr4 (77-148)||(50289729-50289800)
chr4 (84-134)||(51285191-51285241)
chr4 (91-146)||(8600182-8600237)
chr4 (82-148)||(9524640-9524703)
chr4 (136-176)||(20016962-20017002)
chr4 (85-133)||(34257364-34257412)
chr4 (83-147)||(34702922-34702986)
[»] chr5 (12 HSPs)
chr5 (85-150)||(10635342-10635407)
chr5 (81-146)||(6296848-6296913)
chr5 (84-145)||(29814963-29815024)
chr5 (80-175)||(10707766-10707860)
chr5 (90-144)||(9860776-9860831)
chr5 (89-147)||(35097227-35097284)
chr5 (81-121)||(37157001-37157041)
chr5 (95-134)||(15024829-15024868)
chr5 (79-181)||(39735415-39735517)
chr5 (82-119)||(16609721-16609758)
chr5 (83-173)||(7367584-7367675)
chr5 (88-139)||(31674256-31674308)
[»] chr7 (17 HSPs)
chr7 (81-145)||(33084955-33085019)
chr7 (81-181)||(33872805-33872905)
chr7 (79-116)||(41437123-41437160)
chr7 (81-161)||(32002119-32002199)
chr7 (82-129)||(40778242-40778289)
chr7 (81-115)||(46976974-46977008)
chr7 (81-134)||(36025584-36025637)
chr7 (81-133)||(12272484-12272536)
chr7 (83-139)||(22812819-22812875)
chr7 (82-126)||(34779163-34779209)
chr7 (83-133)||(36062553-36062604)
chr7 (83-142)||(42713578-42713637)
chr7 (113-179)||(43735761-43735827)
chr7 (83-137)||(22878432-22878486)
chr7 (95-175)||(37829930-37830011)
chr7 (77-146)||(44184249-44184318)
chr7 (81-113)||(38375012-38375044)
[»] chr2 (10 HSPs)
chr2 (81-148)||(26009785-26009852)
chr2 (81-146)||(10429882-10429947)
chr2 (81-145)||(32103573-32103637)
chr2 (81-148)||(1652530-1652597)
chr2 (88-133)||(14195202-14195247)
chr2 (81-125)||(26849265-26849310)
chr2 (85-148)||(8734464-8734527)
chr2 (81-116)||(36959382-36959417)
chr2 (83-115)||(16452245-16452277)
chr2 (83-131)||(15646806-15646854)
[»] chr3 (15 HSPs)
chr3 (81-148)||(28590389-28590456)
chr3 (95-181)||(51569819-51569905)
chr3 (81-146)||(8790020-8790085)
chr3 (84-132)||(42529433-42529481)
chr3 (99-147)||(50574794-50574842)
chr3 (78-146)||(54135692-54135760)
chr3 (88-181)||(24446866-24446954)
chr3 (88-181)||(24465047-24465135)
chr3 (82-144)||(28409459-28409521)
chr3 (81-146)||(37897584-37897649)
chr3 (79-113)||(22729958-22729992)
chr3 (91-132)||(21498455-21498496)
chr3 (81-133)||(54913721-54913774)
chr3 (81-113)||(223064-223096)
chr3 (159-195)||(34073314-34073350)
[»] chr6 (4 HSPs)
chr6 (89-146)||(31957881-31957938)
chr6 (80-132)||(6958975-6959027)
chr6 (88-132)||(21537469-21537513)
chr6 (87-132)||(29169533-29169578)
[»] scaffold0451 (1 HSPs)
scaffold0451 (82-128)||(7640-7686)


Alignment Details
Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 179
Target Start/End: Original strand, 40172518 - 40172609
Alignment:
Q  88 gggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggcaaggagtaaaatattaatctaacaaacta 179  Q
    |||||||| |||| |||||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  40172518 gggtagctaaactagtttgagctgggggaaaaggagttggaggtcctgggttcaaaccagggcaaggagtaaaatattaatctaacaaacta 40172609  T

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Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 36472710 - 36472647
Alignment:
Q  85 gttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||    
T  36472710 gttgggtagctcaactggtctgagctaagggataaggagttggaggtcctgggttcaaacccgg 36472647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 44752038 - 44751953
Alignment:
Q  88 gggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaac 173  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||||| | || |||| |||||||||||||||    
T  44752038 gggtagctcaactggtttgagctaagggataaggggttggaggttctgggttcaaacccggacaaatgagt-aaatattaatctaac 44751953  T

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Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 40009120 - 40009041
Alignment:
Q  104 ttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagt-aaaatattaatctaacaaactaac 181  Q
    |||||||||||||||||||||||||||||||| ||| ||||| | || || |||| ||||||||||||||||||||||||    
T  40009120 ttgagctaagggaaaaggagttggaggtcctgcgttcaaacctgagcgaatgagtaaaaatattaatctaacaaactaac 40009041  T

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Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 18635779 - 18635713
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    |||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||| ||| ||||    
T  18635779 ggggttgggtagttcaactggtctgagctaagggataaggagtttgaggtcctgggttcaaatccgg 18635713  T

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Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 10799194 - 10799288
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg-gcaaggagtaaaatattaatctaacaa 175  Q
    |||| ||||||||||||||| ||||||||||||||| ||| ||||| || ||||||||| ||||| ||   ||||||| |||||||||||||||||    
T  10799194 ggggattgggtagctcaactagtttgagctaagggataagtagttgaagttcctgggttcaaaccaggatgaaggagt-aaatattaatctaacaa 10799288  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 45443536 - 45443448
Alignment:
Q  87 tgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaaactaa 180  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||    |||| |||||||| | |||||||||| |||||||||||||||||||    
T  45443536 tgggtagcacaactggtttgagc-aagggaaaaagagttggaggt----ggttcaaacccggacgaaggagtaaa-tattaatctaacaaactaa 45443448  T

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Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 32336800 - 32336736
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacc 145  Q
    |||||||||||||||||||| |||| || ||||||| ||||||||| ||||| |||||| |||||    
T  32336800 gggggttgggtagctcaactcgtttaagttaagggataaggagttgaaggtcttgggttcaaacc 32336736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 38487837 - 38487782
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgg 136  Q
    ||||||||||||||||||||| |||||| ||||||  |||||| ||||||||||||    
T  38487837 gggggttgggtagctcaactgatttgagttaagggttaaggagatggaggtcctgg 38487782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 16934396 - 16934338
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtt 139  Q
    |||||||||||| ||||| | |||||||| ||||||||| ||||||||||| |||||||    
T  16934396 gggggttgggtaactcaagttgtttgagccaagggaaaatgagttggaggttctgggtt 16934338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 43183807 - 43183741
Alignment:
Q  81 gggggttgggtagctcaactggtttgagct-aagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    |||||||||||||||||||||||||||||| ||||  || |||||| |||||| |||||| ||||||    
T  43183807 gggggttgggtagctcaactggtttgagctaaaggttaatggagttcgaggtcgtgggttaaaaccc 43183741  T

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Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 52678929 - 52678863
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccg 147  Q
    |||||||| || ||||| |||||||||||  ||||| ||||||||||| |||||||||| |||||||    
T  52678929 gggggttgagtcgctcagctggtttgagcctagggataaggagttggaagtcctgggttaaaacccg 52678863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 11098944 - 11099001
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggt 138  Q
    ||||||||||||||||| | |||||||||||||||  ||||||||||| |||| ||||    
T  11098944 gggggttgggtagctcagcaggtttgagctaagggttaaggagttggaagtccagggt 11099001  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 6871196 - 6871256
Alignment:
Q  85 gttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacc 145  Q
    ||||||||||| || ||||||||| ||||||| ||||| ||||| |||||||||| |||||    
T  6871196 gttgggtagcttaattggtttgagttaagggataaggacttggatgtcctgggttcaaacc 6871256  T

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Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 116
Target Start/End: Original strand, 49294533 - 49294568
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaaggga 116  Q
    |||||||||||||||||||||||||||| |||||||    
T  49294533 gggggttgggtagctcaactggtttgagttaaggga 49294568  T

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Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 43225512 - 43225606
Alignment:
Q  92 agctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaaactaaccatt 185  Q
    |||||| ||| |||||| ||||||||||| ||||||||||| ||| || | | |||| | |||||| ||||||||||||||| ||  ||||||||    
T  43225512 agctcagctgatttgagttaagggaaaagaagttggaggtcatggattcagaaccggacaaaggagaaaaatattaatctaaaaagttaaccatt 43225606  T

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Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 50838824 - 50838794
Alignment:
Q  75 tgattagggggttgggtagctcaactggttt 105  Q
    |||||||||||||||||||||||||||||||    
T  50838824 tgattagggggttgggtagctcaactggttt 50838794  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 5268027 - 5267937
Alignment:
Q  104 ttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggcaa---ggagtaaaatattaatctaacaaactaaccattgacattt 192  Q
    ||||||||| ||| ||||||||||||||| |||||| ||||| ||||||    ||  |||| ||||||||||| ||||||||||| ||||||    
T  5268027 ttgagctaaaggataaggagttggaggtcttgggttcaaacctgggcaaaagagaaaaaaaaattaatctaac-aactaaccattaacattt 5267937  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 27845415 - 27845463
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagttggaggt 131  Q
    ||||||||||||||||||| |||||||||||| |||  ||||| |||||    
T  27845415 gggttgggtagctcaactgatttgagctaaggaaaagagagttagaggt 27845463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 28308492 - 28308444
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagttggaggt 131  Q
    ||||||||||||||||||  |||||||||||||| || ||| |||||||    
T  28308492 gggttgggtagctcaactaatttgagctaagggataaagagatggaggt 28308444  T

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Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 14239333 - 14239243
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaa 172  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| || | || |||||||||||||||||||    
T  14239333 gggttgggtagctcaactggtctgagctaggggataaggagttggaggtcctgggtttaaacctggacgaatgagtaaaatattaatctaa 14239243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 12020069 - 12020119
Alignment:
Q  96 caactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  12020069 caactggtttgagttaagggataaggagttggaggtcctgggttcaaaccc 12020119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 5431627 - 5431674
Alignment:
Q  85 gttgggtagctcaactggtttgagctaagggaaaaggagttggaggtc 132  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  5431627 gttgggtagctcagctgatttgagctaagggataaggagttggaggtc 5431674  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 36665347 - 36665254
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaa 175  Q
    |||||||||||||| |||||||||||||||||||  ||| || ||| | | ||||||| |||||||| | ||||| | |||||||||||||||||    
T  36665347 ggggttgggtagcttaactggtttgagctaagggttaagtagatggggatactgggttcaaacccggacaaaggaat-aaatattaatctaacaa 36665254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 12136496 - 12136549
Alignment:
Q  86 ttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtt 139  Q
    ||||||| ||||||||||||||||||||| | ||| |||||||||| |||||||    
T  12136496 ttgggtaactcaactggtttgagctaaggaataagaagttggaggtactgggtt 12136549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 26055447 - 26055508
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaac 144  Q
    ||||||||||  |||||||||||| | ||||||| ||||||||||||||| |||||| ||||    
T  26055447 gggttgggtatttcaactggtttgtgataagggataaggagttggaggtcatgggttcaaac 26055508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 36548361 - 36548445
Alignment:
Q  95 tcaactggtttgagctaagggaaaaggag-ttggaggtcctgggtttaaa-cccgggcaaggagtaaaatattaatctaacaaac 177  Q
    |||||| |||||||||||||| ||| ||| || ||||||||||||| ||| ||||||||||||  |||||| || ||||||||||    
T  36548361 tcaactagtttgagctaaggggaaaagagtttagaggtcctgggttcaaaccccgggcaaggacaaaaataatagtctaacaaac 36548445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 34453840 - 34453773
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    |||||||||||||| |||||| | |||| ||||||| ||||||| ||||||| |||| | ||||||||    
T  34453840 gggggttgggtagcacaactgatatgagttaagggataaggagtaggaggtcatgggatcaaacccgg 34453773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 5589560 - 5589594
Alignment:
Q  79 tagggggttgggtagctcaactggtttgagctaag 113  Q
    |||||||||||||||||||||||||| ||||||||    
T  5589560 tagggggttgggtagctcaactggttcgagctaag 5589594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 10995345 - 10995387
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggag 123  Q
    |||||||||||||||||| |||||||||| |||||| ||||||    
T  10995345 gggggttgggtagctcaattggtttgagccaagggataaggag 10995387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 24289172 - 24289235
Alignment:
Q  88 gggtagctcaactggtttgagctaag----ggaaaaggagttggaggtcctgggtttaaacccg 147  Q
    |||||| |||||||||||||||||||    ||| ||||||||||||| |||||||| |||||||    
T  24289172 gggtagttcaactggtttgagctaagtaagggacaaggagttggaggacctgggttcaaacccg 24289235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 36772864 - 36772822
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagtt 125  Q
    |||||||||||||||||| |||||||||||| || ||||||||    
T  36772864 gggttgggtagctcaactagtttgagctaagagataaggagtt 36772822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 20472381 - 20472430
Alignment:
Q  80 agggggttgggtagctcaactggtttgagctaagggaaaaggagttggag 129  Q
    |||||||||||||| ||||||  |||||||||||||| || |||||||||    
T  20472381 agggggttgggtagttcaactactttgagctaagggataaagagttggag 20472430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 2097082 - 2097173
Alignment:
Q  84 ggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggcaa-ggagtaaaatattaatctaacaa 175  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||    
T  2097082 ggttgggtagctcaactagtttgagctaagggttaaggagttggaggtcctgggttcaaacccggacaagggagt-aaatattaatctaacaa 2097173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 8456800 - 8456867
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  8456800 ggggcttgggtagctcaactggtttgagctaagggataaggagttggatgtcctgggttcaaacccgg 8456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 25391011 - 25391104
Alignment:
Q  80 agggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg-gcaaggagtaaaatattaatctaac 173  Q
    ||||| |||||||||||| ||||||||||||||||||||| |||||||||||  |||||| |||||||| | ||||||||||| |||||||||||    
T  25391011 aggggattgggtagctcatctggtttgagctaagggaaaaagagttggaggtagtgggttcaaacccggcggaaggagtaaaa-attaatctaac 25391104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 5251942 - 5251890
Alignment:
Q  86 ttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggt 138  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5251942 ttgggtagctcaactggtttgagccaagggaaaaggagttggaggtcctgggt 5251890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 30979818 - 30979885
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||||    
T  30979818 ggggattgggtagctcaactggtttgagctaagggataaggagttggaggtcttgggctcaaacccgg 30979885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 38020376 - 38020462
Alignment:
Q  89 ggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaa 175  Q
    |||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||||| | ||||||| |||||||||||||||||    
T  38020376 ggtagctcaactggtttgagctaagggttaaggagttggaggtccaaggttcaaacccggacgaaggagt-aaatattaatctaacaa 38020462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 38273033 - 38272947
Alignment:
Q  87 tgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggcaaggagtaaaatattaatctaacaa 175  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||| || |||| |||||||| ||| |||  ||||| |||||||||||    
T  38273033 tgggtagctcaactggtttgagctaagggataagaagttgggggttcttggttcaaacccggacaacgag--aaatactaatctaacaa 38272947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 29728862 - 29728814
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggag 129  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  29728862 gggggttgggtagctcaactggtttgagctaagggttaaggagttggag 29728814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 6478420 - 6478490
Alignment:
Q  111 aagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaaactaac 181  Q
    |||||||||||||||||||| |||| ||| |||||||| | |||||| ||||||||||||||||||||||||    
T  6478420 aagggaaaaggagttggagggcctgtgttcaaacccggacaaaggag-aaaatattaatctaacaaactaac 6478490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 38450695 - 38450761
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||||  ||||||| ||| ||||    
T  38450695 ggggttgggtagctcaactggtttgagctaagggttaagaagttggaggctctgggttcaaatccgg 38450761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 41594107 - 41594022
Alignment:
Q  91 tagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggcaa-ggagtaaaatattaatctaacaaa 176  Q
    |||||||||||||||| ||||||||  ||| |||||||||| ||||||| |||||| | ||| ||||| ||||||||||||||||||    
T  41594107 tagctcaactggtttgtgctaagggttaagaagttggaggtactgggttcaaacccagacaagggagt-aaatattaatctaacaaa 41594022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 42687614 - 42687680
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    |||||||||| ||||||||||||||| |||| ||| |||||||| ||||||||| ||| ||||||||    
T  42687614 ggggttgggtcgctcaactggtttgatctaaaggataaggagttcgaggtcctgagttcaaacccgg 42687680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 20228273 - 20228328
Alignment:
Q  91 tagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    |||||||||| ||||||||||||||  ||||||||||||||| |||||| ||||||    
T  20228273 tagctcaactagtttgagctaagggttaaggagttggaggtcttgggttcaaaccc 20228328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 50289729 - 50289800
Alignment:
Q  77 attagggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    |||| |||||| ||||||| || |||||||| |||||| ||||| ||||||||||||| |||| ||||||||    
T  50289729 attaaggggtttggtagcttaagtggtttgaactaaggcaaaagaagttggaggtcctaggttcaaacccgg 50289800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 51285241 - 51285191
Alignment:
Q  84 ggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcct 134  Q
    ||||||||||||||||| ||||||||||||||| || || |||||||||||    
T  51285241 ggttgggtagctcaactagtttgagctaagggataatgaattggaggtcct 51285191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 8600237 - 8600182
Alignment:
Q  91 tagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    ||||||||||||||||| |||| | |||| ||||||||| ||||||||| ||||||    
T  8600237 tagctcaactggtttgaactaaagaaaaatgagttggagatcctgggttcaaaccc 8600182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 9524640 - 9524703
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    ||||||||||| ||||| ||||||||||||| | | |||||||   |||||||||||| ||||||||    
T  9524640 ggggttgggtaactcaagtggtttgagctaaagaataaggagt---aggtcctgggttcaaacccgg 9524703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 20017002 - 20016962
Alignment:
Q  136 ggtttaaacccgggcaaggagtaaaatattaatctaacaaa 176  Q
    |||| ||||||| |||| |||||||||||||||||||||||    
T  20017002 ggttcaaacccgagcaaagagtaaaatattaatctaacaaa 20016962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 34257364 - 34257412
Alignment:
Q  85 gttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcc 133  Q
    |||||||||| ||||||||||||||||||||  ||  ||||||||||||    
T  34257364 gttgggtagcacaactggtttgagctaagggctaaatagttggaggtcc 34257412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 34702986 - 34702922
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccg 147  Q
    ||||||||||| ||| ||| ||||||| |||||| |||||||||||| | |||| || |||||||    
T  34702986 gggttgggtagttcatctgatttgagccaagggataaggagttggagtttctggtttcaaacccg 34702922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 10635407 - 10635342
Alignment:
Q  85 gttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc 150  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  10635407 gttgggtagctcaactggtttgagctaagggataaggagttggaggtcctggcttcaaacccgggc 10635342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 6296848 - 6296913
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  6296848 gggggttgggtagctcaattggtttgagctaagggataaggagttggaggttctgggttcaaaccc 6296913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 29815024 - 29814963
Alignment:
Q  84 ggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacc 145  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||    
T  29815024 ggttgggtagctcaattggtttgagctaagggataaggagttggaggtcctaggttcaaacc 29814963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 10707860 - 10707766
Alignment:
Q  80 agggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaa 175  Q
    |||||||||| || |||||||| ||| |||||||||| |||||||| ||||| ||| |||||||||||| | ||||||  ||| |||||||||||||    
T  10707860 agggggttggataactcaactgctttaagctaagggataaggagtttgaggttctgagtttaaacccggacgaaggag--aaaaattaatctaacaa 10707766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 9860831 - 9860776
Alignment:
Q  90 gtagctcaactggtttgagctaaggg-aaaaggagttggaggtcctgggtttaaac 144  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  9860831 gtagctcaactggtttgagctaagggttaaaggagttggaggtcctgagttcaaac 9860776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 35097284 - 35097227
Alignment:
Q  89 ggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccg 147  Q
    ||||||||||||||||||||  |||| ||||| |||||||||| |||||||||||||||    
T  35097284 ggtagctcaactggtttgagtcaaggaaaaagaagttggaggt-ctgggtttaaacccg 35097227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 37157041 - 37157001
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaagg 121  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  37157041 gggggttggctagctcaactggtttgagccaagggaaaagg 37157001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 15024868 - 15024829
Alignment:
Q  95 tcaactggtttgagctaagggaaaaggagttggaggtcct 134  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  15024868 tcaaccggtttgagctaagggataaggagttggaggtcct 15024829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 39735517 - 39735415
Alignment:
Q  79 tagggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaaac 177  Q
    ||||||||||| | ||||||| ||||||||| ||| |||||| || ||| |||||||| || |||||||  | || |||| |||||||||| ||||||||    
T  39735517 tagggggttggatggctcaacgggtttgagccaagtgaaaagaagctgggggtcctggattcaaacccgaacaaatgagt-aaatattaatataacaaac 39735419  T
Q  178 taac 181  Q
    ||||    
T  39735418 taac 39735415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 16609758 - 16609721
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaagggaaaa 119  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  16609758 ggggttgggtaactcaactggtttgagcttagggaaaa 16609721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 7367584 - 7367675
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaaggga-aaaggagttggaggtcctgggtttaaac-ccgggcaaggagtaaaatattaatctaac 173  Q
    ||||||| | |||||||| ||||| ||||||||  |||||||||||||||| |||||| |||| |||   ||||||| |||||||||||||||    
T  7367584 gggttggattgctcaacttgtttgcgctaagggttaaaggagttggaggtcttgggttcaaacaccgacgaaggagt-aaatattaatctaac 7367675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 31674256 - 31674308
Alignment:
Q  88 gggtagctcaactggtttgagctaa-gggaaaaggagttggaggtcctgggtt 139  Q
    |||||||||||||||||||| |||| ||| |||||||||||| |||| |||||    
T  31674256 gggtagctcaactggtttgaactaaggggtaaaggagttggatgtcccgggtt 31674308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 33085019 - 33084955
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacc 145  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  33085019 gggggttgggtagctcaactggtttgagctaagggatatggagttggaggtcctgggttaaaacc 33084955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 33872905 - 33872805
Alignment:
Q  81 gggggttgggtagctcaactggtttgagct-aagggaaaaggagttggaggtcctgggtttaaacccgggcaaggagtaaaatattaatctaacaaacta 179  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||  |||||| |||||     ||||| | |||||||||||||||||||||    
T  33872905 gggggttgggtaactcaactggtttgagctaaagggaaaaggagttggaggttttgggttcaaaccgaacaaaggact-aaatattaatctaacaaacta 33872807  T
Q  180 ac 181  Q
    ||    
T  33872806 ac 33872805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 41437123 - 41437160
Alignment:
Q  79 tagggggttgggtagctcaactggtttgagctaaggga 116  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41437123 tagggggttgggtagctcaactggtttgagctaaggga 41437160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 32002199 - 32002119
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggcaaggagtaaaa 161  Q
    ||||||||| |||||||||||||||||||||||||  |||| ||||| ||||  ||||||||  || ||||||||| ||||    
T  32002199 gggggttggttagctcaactggtttgagctaagggttaaggtgttggcggtcaagggtttaagtcctggcaaggagaaaaa 32002119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 40778289 - 40778242
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaagggaaaaggagttggag 129  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  40778289 ggggttgggtagctgaactggtttgaactaagggataaggagttggag 40778242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 115
Target Start/End: Complemental strand, 46977008 - 46976974
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaaggg 115  Q
    |||||||||||||||||||||||||||||||||||    
T  46977008 gggggttgggtagctcaactggtttgagctaaggg 46976974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 36025584 - 36025637
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcct 134  Q
    |||||||||||| ||||| ||| |||||| ||||||||| ||||||||||||||    
T  36025584 gggggttgggtaactcaagtggcttgagccaagggaaaatgagttggaggtcct 36025637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 12272536 - 12272484
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcc 133  Q
    |||||||||||| ||||||||||||||| ||| ||  ||||||||||||||||    
T  12272536 gggggttgggtaactcaactggtttgagttaatggttaaggagttggaggtcc 12272484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 22812819 - 22812875
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtt 139  Q
    |||||| ||| |||||||||||| |||||||||  ||||||||||||||||| ||||    
T  22812819 gggttgagtacctcaactggtttcagctaagggttaaggagttggaggtcctcggtt 22812875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 34779163 - 34779209
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaaggga--aaaggagttg 126  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||    
T  34779163 ggggttgggtagctcaactggcttgagctaagggattaaaggagttg 34779209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 36062604 - 36062553
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaaggg-aaaaggagttggaggtcc 133  Q
    |||||||||||||||||| ||||||||||||||  |||||||| ||||||||    
T  36062604 gggttgggtagctcaacttgtttgagctaagggttaaaggagtaggaggtcc 36062553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 42713578 - 42713637
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaa 142  Q
    |||||||| |||||||||| |||||||||||||  || ||||| ||||||| ||||||||    
T  42713578 gggttgggcagctcaactgatttgagctaagggttaacgagttagaggtccagggtttaa 42713637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 43735827 - 43735761
Alignment:
Q  113 gggaaaaggagttggaggtcctgggtttaaacccgggcaa-ggagtaaaatattaatctaacaaacta 179  Q
    ||||||||| ||||||| ||||||||| |||||| | ||| |||||||| ||||||||||||||||||    
T  43735827 gggaaaaggggttggagatcctgggttgaaacccagacaaaggagtaaa-tattaatctaacaaacta 43735761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 22878432 - 22878486
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctggg 137  Q
    |||||| ||| |||||||||||| | |||||||  ||||||||||||||||||||    
T  22878432 gggttgagtacctcaactggtttcaactaagggttaaggagttggaggtcctggg 22878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 37829930 - 37830011
Alignment:
Q  95 tcaactggtttgagctaaggga-aaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaa 175  Q
    ||||||||||||| |||||||  |||||||||||| ||||||| || |||||||| | ||||||| | |||||||||||||||    
T  37829930 tcaactggtttgatctaagggttaaaggagttggaagtcctggcttcaaacccggacgaaggagt-agatattaatctaacaa 37830011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 44184318 - 44184249
Alignment:
Q  77 attagggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    |||| ||||||| ||| |||||||||||||| |||||||  || |||||||||||| || ||| ||||||    
T  44184318 attatggggttgagtaactcaactggtttgaactaagggttaatgagttggaggtcatgtgttcaaaccc 44184249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 38375012 - 38375044
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaag 113  Q
    |||||||||||||||||||| ||||||||||||    
T  38375012 gggggttgggtagctcaactcgtttgagctaag 38375044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 26009785 - 26009852
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||| ||||||||    
T  26009785 gggggttgggtagctcaactggtttgagccaagggataaagagttggaggtcctgggttcaaacccgg 26009852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 10429947 - 10429882
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||| ||||||    
T  10429947 gggggttgggtagctcaactggtttgagctaagggataaggagtaggaggtctttggttcaaaccc 10429882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 32103573 - 32103637
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacc 145  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||| |||||    
T  32103573 gggggttgggtagctcaactagtttgagctaagggatgaggagttggaggtcatgggttcaaacc 32103637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 1652530 - 1652597
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    |||| ||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||||    
T  1652530 ggggattgggtagctcaactggtttgagctaagggataagaaattggaggtcctaggttcaaacccgg 1652597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 14195247 - 14195202
Alignment:
Q  88 gggtagctcaactggtttgagctaagggaaaaggagttggaggtcc 133  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  14195247 gggtagctcaactggtttgagctaagggttaaggagttggaggtcc 14195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 26849310 - 26849265
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaaggga-aaaggagtt 125  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  26849310 gggggttgggtagctcaactggtttgagctaagggataaaggagtt 26849265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 8734464 - 8734527
Alignment:
Q  85 gttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||||||  |||||| ||| ||||    
T  8734464 gttgggtagcttaactggtttgagctgagggataaggagttggaggtattgggttcaaatccgg 8734527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 116
Target Start/End: Original strand, 36959382 - 36959417
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaaggga 116  Q
    ||||||||||||||||||||||||||||||||||||    
T  36959382 gggggttgggtagctcaactggtttgagctaaggga 36959417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 16452277 - 16452245
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaaggg 115  Q
    |||||||||||||||||||||||||||||||||    
T  16452277 gggttgggtagctcaactggtttgagctaaggg 16452245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 15646806 - 15646854
Alignment:
Q  83 gggttgggtagctcaactggtttgagctaagggaaaaggagttggaggt 131  Q
    ||||| ||||||||||||||||||||||||  |  ||||||||||||||    
T  15646806 gggttcggtagctcaactggtttgagctaaatgttaaggagttggaggt 15646854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 28590456 - 28590389
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgg 148  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||    
T  28590456 gggggttgggtaactcaactggtttgagctaagggacaaggtgttggaggtcctgagttcaaacccgg 28590389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 51569819 - 51569905
Alignment:
Q  95 tcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaaactaac 181  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||| ||| | |||||| || |||||||||||||||||||||    
T  51569819 tcaattggtttgagctaagggaaaaggagttggaggttctgggttcaaactcggacgaaggag-aagatattaatctaacaaactaac 51569905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 8790085 - 8790020
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    |||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||    
T  8790085 gggggttgggcagctcaactggtttgagctaagggacacagagttggaggtcctgggttcaaaccc 8790020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 42529433 - 42529481
Alignment:
Q  84 ggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtc 132  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  42529433 ggttgggtagctcagctggtttgagctaagggataaggagttggaggtc 42529481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 50574842 - 50574794
Alignment:
Q  99 ctggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccg 147  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||    
T  50574842 ctggtttgagctaagggataaggagttggaggtcctgggttgaaacccg 50574794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 54135692 - 54135760
Alignment:
Q  78 ttagggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    ||||||||||||||||||  | || ||||||||||| |||||||| |||||||||||||||| ||||||    
T  54135692 ttagggggttgggtagctttaatgatttgagctaagagaaaaggaattggaggtcctgggttcaaaccc 54135760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 24446866 - 24446954
Alignment:
Q  88 gggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaaactaac 181  Q
    |||||||||||||||||||||||||||||||      ||||||||||||| | |||| ||| | |||||| |||| |||||||||||||||||||    
T  24446866 gggtagctcaactggtttgagctaagggaaa------tggaggtcctgggatcaaactcggacgaaggagaaaaacattaatctaacaaactaac 24446954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 24465047 - 24465135
Alignment:
Q  88 gggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaacccgggc-aaggagtaaaatattaatctaacaaactaac 181  Q
    |||||||||||||||||||||||||||||||      ||||||||||||| | |||| ||| | |||||| |||| |||||||||||||||||||    
T  24465047 gggtagctcaactggtttgagctaagggaaa------tggaggtcctgggatcaaactcggacgaaggagaaaaacattaatctaacaaactaac 24465135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 28409521 - 28409459
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaac 144  Q
    ||||||||||| ||||||||| |||||||||||||| | ||||||||||||| ||||| ||||    
T  28409521 ggggttgggtaactcaactgggttgagctaagggaagatgagttggaggtcccgggttcaaac 28409459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 37897584 - 37897649
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    |||| ||||||||||||||||| ||| ||| | ||| || ||||||||||||||||||| ||||||    
T  37897584 ggggattgggtagctcaactggattgggctgaaggataaagagttggaggtcctgggttcaaaccc 37897649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 22729992 - 22729958
Alignment:
Q  79 tagggggttgggtagctcaactggtttgagctaag 113  Q
    |||||||||||||||||||||||||| ||||||||    
T  22729992 tagggggttgggtagctcaactggttcgagctaag 22729958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 21498496 - 21498455
Alignment:
Q  91 tagctcaactggtttgagctaagggaaaaggagttggaggtc 132  Q
    |||||||||| ||||||||||||||| || ||||||||||||    
T  21498496 tagctcaactagtttgagctaagggataacgagttggaggtc 21498455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 54913774 - 54913721
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaaggg-aaaaggagttggaggtcc 133  Q
    |||| ||||||||||||||| ||||||||||||||  ||| |||||||||||||    
T  54913774 ggggtttgggtagctcaactagtttgagctaagggttaaaagagttggaggtcc 54913721  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 223064 - 223096
Alignment:
Q  81 gggggttgggtagctcaactggtttgagctaag 113  Q
    ||||||||| |||||||||||||||||||||||    
T  223064 gggggttggatagctcaactggtttgagctaag 223096  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 34073350 - 34073314
Alignment:
Q  159 aaatattaatctaacaaactaaccattgacattttcc 195  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  34073350 aaatattaatctaacaaactaactattaacattttcc 34073314  T

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Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 31957881 - 31957938
Alignment:
Q  89 ggtagctcaactggtttgagctaagggaaaaggagttggaggtcctgggtttaaaccc 146  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  31957881 ggtagctcgactggtttgagctaagggataaggagttggaggtcctgggttgaaaccc 31957938  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 6958975 - 6959027
Alignment:
Q  80 agggggttgggtagctcaactggtttgagctaagggaaaaggagttggaggtc 132  Q
    ||||| |||||||||||| |||||||||||||| ||| |||||| ||||||||    
T  6958975 aggggtttgggtagctcagctggtttgagctaaaggataaggagatggaggtc 6959027  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 21537469 - 21537513
Alignment:
Q  88 gggtagctcaactggtttgagctaagggaaaaggagttggaggtc 132  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||    
T  21537469 gggtagctcaactagtttgagctaagggttaaggagttggaggtc 21537513  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 29169533 - 29169578
Alignment:
Q  87 tgggtagctcaactggtttgagctaagggaaaaggagttggaggtc 132  Q
    |||||||||||||  |||||||| |||||| |||||||||||||||    
T  29169533 tgggtagctcaacctgtttgagccaagggataaggagttggaggtc 29169578  T

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Target: scaffold0451 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 7686 - 7640
Alignment:
Q  82 ggggttgggtagctcaactggtttgagctaagggaaaaggagttgga 128  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  7686 ggggttgggtagctcaactggtttgacctaagggtaaaagagttgga 7640  T

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