View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0412_high_183 (Length: 246)

Name: NF0412_high_183
Description: NF0412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0412_high_183
NF0412_high_183
[»] chr2 (67 HSPs)
chr2 (54-238)||(29548629-29548811)
chr2 (100-230)||(8197541-8197671)
chr2 (100-230)||(8202301-8202431)
chr2 (96-226)||(33504371-33504502)
chr2 (96-230)||(9496014-9496148)
chr2 (96-228)||(12026014-12026139)
chr2 (96-230)||(33287569-33287703)
chr2 (100-230)||(38435104-38435234)
chr2 (96-230)||(43832246-43832380)
chr2 (96-229)||(45543074-45543206)
chr2 (96-213)||(37470150-37470267)
chr2 (103-227)||(19336896-19337020)
chr2 (96-226)||(19234988-19235118)
chr2 (101-230)||(3481307-3481436)
chr2 (100-229)||(18959063-18959192)
chr2 (96-156)||(26784414-26784474)
chr2 (97-181)||(42149709-42149793)
chr2 (96-227)||(42092665-42092796)
chr2 (96-230)||(12882045-12882179)
chr2 (96-213)||(1626343-1626460)
chr2 (162-230)||(9531600-9531668)
chr2 (159-231)||(11992107-11992179)
chr2 (98-222)||(19024328-19024452)
chr2 (159-229)||(887065-887136)
chr2 (96-228)||(35755247-35755383)
chr2 (96-230)||(9556369-9556503)
chr2 (96-230)||(44437721-44437855)
chr2 (166-231)||(10516748-10516813)
chr2 (150-231)||(17429252-17429333)
chr2 (159-228)||(34931643-34931712)
chr2 (97-138)||(41779202-41779243)
chr2 (111-148)||(42582520-42582557)
chr2 (159-231)||(12474926-12474998)
chr2 (200-232)||(32706495-32706527)
chr2 (162-230)||(43573130-43573198)
chr2 (159-230)||(227400-227471)
chr2 (159-230)||(3635323-3635394)
chr2 (159-230)||(4807806-4807877)
chr2 (163-230)||(12520062-12520129)
chr2 (97-148)||(18188901-18188952)
chr2 (159-230)||(28508889-28508960)
chr2 (159-230)||(30306243-30306314)
chr2 (96-231)||(31959669-31959804)
chr2 (116-171)||(32402668-32402723)
chr2 (164-231)||(36993751-36993817)
chr2 (109-172)||(37452284-37452347)
chr2 (96-230)||(12141692-12141826)
chr2 (200-230)||(14530532-14530562)
chr2 (160-230)||(17670680-17670750)
chr2 (96-138)||(26670916-26670958)
chr2 (103-181)||(33625247-33625325)
chr2 (109-230)||(11412869-11412992)
chr2 (109-230)||(13240763-13240884)
chr2 (96-181)||(23915742-23915827)
chr2 (186-231)||(38452685-38452730)
chr2 (109-227)||(45077888-45078008)
chr2 (158-230)||(2515171-2515243)
chr2 (110-230)||(6219127-6219247)
chr2 (186-230)||(12489802-12489846)
chr2 (178-230)||(15775845-15775897)
chr2 (158-230)||(25384679-25384751)
chr2 (186-230)||(25834916-25834960)
chr2 (186-230)||(35643186-35643230)
chr2 (186-230)||(38328370-38328414)
chr2 (98-138)||(38860328-38860368)
chr2 (186-230)||(41763043-41763087)
chr2 (178-226)||(45482989-45483037)
[»] chr1 (75 HSPs)
chr1 (96-230)||(38869030-38869164)
chr1 (99-230)||(8796360-8796491)
chr1 (96-227)||(42501256-42501387)
chr1 (96-230)||(3818856-3818990)
chr1 (112-230)||(31274401-31274519)
chr1 (96-230)||(41560377-41560511)
chr1 (114-230)||(5338879-5338995)
chr1 (99-231)||(33560857-33560989)
chr1 (96-213)||(7124289-7124406)
chr1 (54-230)||(6025713-6025887)
chr1 (96-228)||(37462878-37463009)
chr1 (96-229)||(8342885-8343015)
chr1 (123-230)||(34444531-34444638)
chr1 (102-227)||(39140669-39140794)
chr1 (109-230)||(43375598-43375719)
chr1 (98-227)||(52532619-52532748)
chr1 (96-229)||(52561590-52561723)
chr1 (97-145)||(6299478-6299526)
chr1 (110-226)||(27072491-27072607)
chr1 (96-231)||(36339803-36339937)
chr1 (123-190)||(13827620-13827687)
chr1 (124-231)||(25715325-25715432)
chr1 (100-210)||(9599414-9599524)
chr1 (96-230)||(32404527-32404660)
chr1 (109-229)||(4590533-4590653)
chr1 (159-231)||(21769710-21769782)
chr1 (96-148)||(30834059-30834111)
chr1 (123-230)||(4707221-4707327)
chr1 (159-230)||(28090694-28090765)
chr1 (159-230)||(38807671-38807742)
chr1 (96-171)||(40416519-40416594)
chr1 (159-230)||(44941776-44941847)
chr1 (159-230)||(50846773-50846844)
chr1 (120-230)||(6084147-6084257)
chr1 (116-230)||(10200306-10200420)
chr1 (123-213)||(48861392-48861484)
chr1 (162-230)||(2914123-2914191)
chr1 (98-170)||(10569131-10569203)
chr1 (98-170)||(15577568-15577640)
chr1 (99-231)||(19908383-19908515)
chr1 (123-167)||(25460182-25460226)
chr1 (159-231)||(28533678-28533750)
chr1 (159-231)||(49347392-49347464)
chr1 (159-230)||(1210956-1211027)
chr1 (159-230)||(7133302-7133373)
chr1 (159-230)||(15086133-15086204)
chr1 (100-230)||(16822020-16822150)
chr1 (97-156)||(17815628-17815687)
chr1 (159-230)||(22090307-22090378)
chr1 (159-230)||(25979231-25979302)
chr1 (159-230)||(29577463-29577534)
chr1 (159-230)||(30202130-30202201)
chr1 (104-231)||(38877342-38877469)
chr1 (159-230)||(39525976-39526047)
chr1 (159-230)||(44751695-44751766)
chr1 (96-138)||(8203226-8203268)
chr1 (96-138)||(8676957-8676999)
chr1 (96-138)||(19969304-19969346)
chr1 (200-230)||(22930645-22930675)
chr1 (96-230)||(39515868-39516002)
chr1 (117-171)||(40920588-40920642)
chr1 (200-230)||(43898461-43898491)
chr1 (96-145)||(12231513-12231562)
chr1 (113-230)||(27847800-27847917)
chr1 (186-231)||(52921318-52921363)
chr1 (186-230)||(696508-696552)
chr1 (159-231)||(2544804-2544876)
chr1 (162-230)||(3777260-3777328)
chr1 (98-230)||(11941580-11941712)
chr1 (102-146)||(12135861-12135905)
chr1 (186-230)||(28694063-28694107)
chr1 (186-230)||(38758020-38758064)
chr1 (159-231)||(40568409-40568481)
chr1 (186-230)||(43481798-43481842)
chr1 (116-148)||(43954364-43954396)
[»] chr8 (62 HSPs)
chr8 (96-230)||(30198266-30198400)
chr8 (96-230)||(35643608-35643740)
chr8 (96-231)||(29520797-29520932)
chr8 (96-230)||(39967499-39967633)
chr8 (115-230)||(490502-490617)
chr8 (96-231)||(35914600-35914735)
chr8 (96-231)||(45419383-45419518)
chr8 (123-231)||(3638334-3638440)
chr8 (96-173)||(4011231-4011308)
chr8 (96-213)||(16035744-16035861)
chr8 (98-230)||(30783042-30783174)
chr8 (159-230)||(1928587-1928658)
chr8 (96-230)||(30559841-30559980)
chr8 (96-230)||(23492182-23492316)
chr8 (97-227)||(24399793-24399922)
chr8 (98-171)||(10108963-10109036)
chr8 (101-226)||(45041320-45041444)
chr8 (96-148)||(79175-79227)
chr8 (159-227)||(1313775-1313843)
chr8 (186-230)||(16921457-16921501)
chr8 (96-197)||(10079943-10080041)
chr8 (115-230)||(21425213-21425328)
chr8 (163-222)||(30689950-30690009)
chr8 (102-229)||(35362651-35362778)
chr8 (159-230)||(36545360-36545431)
chr8 (116-230)||(15215412-15215526)
chr8 (96-190)||(23023373-23023467)
chr8 (98-136)||(24558633-24558671)
chr8 (100-181)||(11733899-11733980)
chr8 (145-230)||(35323970-35324055)
chr8 (104-168)||(16917339-16917403)
chr8 (97-145)||(24739933-24739981)
chr8 (97-229)||(36069751-36069883)
chr8 (100-148)||(39388935-39388983)
chr8 (186-230)||(44047532-44047576)
chr8 (159-230)||(10668497-10668568)
chr8 (159-230)||(11523723-11523794)
chr8 (159-230)||(14742082-14742153)
chr8 (131-230)||(25473403-25473502)
chr8 (159-230)||(27556302-27556373)
chr8 (159-230)||(32276896-32276967)
chr8 (159-230)||(42469727-42469798)
chr8 (159-230)||(42584570-42584640)
chr8 (180-230)||(1064952-1065002)
chr8 (101-231)||(4955344-4955474)
chr8 (117-231)||(12611666-12611780)
chr8 (96-229)||(14459043-14459177)
chr8 (96-226)||(32931109-32931238)
chr8 (99-156)||(16705898-16705955)
chr8 (97-226)||(16715422-16715551)
chr8 (159-224)||(18741843-18741908)
chr8 (159-224)||(18746807-18746872)
chr8 (161-230)||(41031420-41031489)
chr8 (161-230)||(41031526-41031595)
chr8 (96-197)||(43904698-43904799)
chr8 (186-231)||(44529463-44529508)
chr8 (114-230)||(1549391-1549507)
chr8 (101-157)||(9999460-9999515)
chr8 (126-230)||(30748641-30748745)
chr8 (109-145)||(33666655-33666691)
chr8 (186-230)||(35320400-35320444)
chr8 (96-176)||(38391947-38392027)
[»] chr6 (31 HSPs)
chr6 (96-230)||(34505-34639)
chr6 (96-230)||(1747946-1748079)
chr6 (96-234)||(31818679-31818817)
chr6 (103-223)||(6293399-6293519)
chr6 (100-231)||(5095986-5096117)
chr6 (97-230)||(9593710-9593841)
chr6 (96-229)||(33997545-33997678)
chr6 (96-230)||(8364704-8364838)
chr6 (159-230)||(12890786-12890857)
chr6 (116-230)||(5897625-5897739)
chr6 (97-171)||(35199682-35199755)
chr6 (159-212)||(7513008-7513061)
chr6 (159-228)||(30789076-30789145)
chr6 (166-230)||(579636-579700)
chr6 (159-227)||(21089608-21089676)
chr6 (100-192)||(24665963-24666055)
chr6 (159-227)||(30031467-30031535)
chr6 (158-230)||(30642979-30643051)
chr6 (159-230)||(4245872-4245943)
chr6 (159-230)||(31819042-31819113)
chr6 (159-229)||(608372-608442)
chr6 (109-230)||(586011-586132)
chr6 (97-138)||(1681613-1681654)
chr6 (186-231)||(9707008-9707053)
chr6 (159-231)||(12119641-12119714)
chr6 (186-231)||(34934829-34934874)
chr6 (159-231)||(1615222-1615294)
chr6 (97-229)||(5053675-5053807)
chr6 (186-230)||(28085614-28085658)
chr6 (177-229)||(29196006-29196058)
chr6 (186-230)||(33730203-33730247)
[»] chr4 (87 HSPs)
chr4 (96-227)||(37042667-37042798)
chr4 (112-230)||(22420717-22420835)
chr4 (109-230)||(55007907-55008028)
chr4 (109-230)||(25574985-25575106)
chr4 (96-229)||(26024851-26024984)
chr4 (123-227)||(31339699-31339803)
chr4 (96-171)||(6843763-6843838)
chr4 (96-231)||(31403033-31403168)
chr4 (96-230)||(37488239-37488373)
chr4 (96-230)||(45204840-45204973)
chr4 (96-230)||(51421878-51422012)
chr4 (113-230)||(41192226-41192343)
chr4 (96-192)||(47372799-47372895)
chr4 (96-230)||(42293265-42293399)
chr4 (97-230)||(44719361-44719497)
chr4 (126-231)||(29209174-29209279)
chr4 (126-230)||(51438623-51438727)
chr4 (98-229)||(26037506-26037637)
chr4 (100-171)||(42639079-42639150)
chr4 (159-230)||(45209205-45209276)
chr4 (96-231)||(48622542-48622677)
chr4 (96-230)||(31961266-31961400)
chr4 (96-230)||(35690419-35690553)
chr4 (157-231)||(47372913-47372987)
chr4 (99-148)||(7544605-7544654)
chr4 (99-230)||(27338387-27338515)
chr4 (98-230)||(2589222-2589354)
chr4 (159-231)||(23906296-23906368)
chr4 (97-153)||(50662537-50662593)
chr4 (96-195)||(7681945-7682044)
chr4 (159-230)||(29399015-29399086)
chr4 (109-228)||(55388213-55388332)
chr4 (96-230)||(13805265-13805399)
chr4 (97-231)||(28550454-28550588)
chr4 (96-230)||(31959814-31959948)
chr4 (96-230)||(40018189-40018323)
chr4 (96-138)||(50680888-50680930)
chr4 (100-230)||(50967028-50967157)
chr4 (96-226)||(54470355-54470485)
chr4 (96-213)||(8598958-8599075)
chr4 (173-230)||(15665326-15665383)
chr4 (96-197)||(21214619-21214720)
chr4 (96-145)||(38903803-38903852)
chr4 (159-227)||(20192244-20192311)
chr4 (123-230)||(5306471-5306578)
chr4 (159-230)||(6957809-6957880)
chr4 (159-230)||(8286650-8286721)
chr4 (159-230)||(12494874-12494945)
chr4 (159-230)||(19154863-19154934)
chr4 (159-230)||(28236393-28236464)
chr4 (159-230)||(39100536-39100607)
chr4 (123-230)||(40932924-40933031)
chr4 (163-230)||(48174093-48174160)
chr4 (96-231)||(49738549-49738684)
chr4 (159-230)||(52569515-52569586)
chr4 (159-230)||(56375501-56375572)
chr4 (116-230)||(1777017-1777131)
chr4 (159-229)||(3979131-3979201)
chr4 (159-229)||(4548233-4548303)
chr4 (96-138)||(10209184-10209226)
chr4 (96-230)||(20999148-20999282)
chr4 (96-194)||(21107140-21107238)
chr4 (101-171)||(30621260-30621330)
chr4 (103-145)||(47147528-47147570)
chr4 (160-230)||(50869880-50869950)
chr4 (96-226)||(51841202-51841332)
chr4 (201-238)||(6931714-6931751)
chr4 (96-145)||(20047583-20047632)
chr4 (162-231)||(28348271-28348340)
chr4 (173-230)||(30634106-30634163)
chr4 (97-138)||(33225925-33225966)
chr4 (96-181)||(44384979-44385063)
chr4 (159-228)||(51550251-51550320)
chr4 (186-230)||(436467-436511)
chr4 (96-144)||(934517-934565)
chr4 (186-230)||(7066499-7066543)
chr4 (163-227)||(15661875-15661939)
chr4 (186-230)||(21528526-21528570)
chr4 (186-226)||(25967267-25967307)
chr4 (102-138)||(26025011-26025047)
chr4 (159-231)||(27450179-27450251)
chr4 (97-145)||(45569094-45569142)
chr4 (186-230)||(46153946-46153990)
chr4 (186-230)||(50238615-50238659)
chr4 (186-230)||(50238701-50238745)
chr4 (111-171)||(55028984-55029044)
chr4 (186-230)||(56130408-56130452)
[»] chr7 (69 HSPs)
chr7 (105-230)||(36101777-36101902)
chr7 (96-227)||(28627936-28628067)
chr7 (96-230)||(12966164-12966298)
chr7 (99-231)||(40138947-40139079)
chr7 (96-231)||(40979927-40980062)
chr7 (96-227)||(45601624-45601755)
chr7 (96-230)||(9210704-9210838)
chr7 (96-190)||(42177058-42177152)
chr7 (111-230)||(30199967-30200083)
chr7 (96-197)||(22174148-22174249)
chr7 (109-230)||(27893563-27893684)
chr7 (97-230)||(38135213-38135346)
chr7 (159-231)||(20158670-20158742)
chr7 (159-230)||(1011257-1011328)
chr7 (96-155)||(24549763-24549822)
chr7 (109-231)||(28541942-28542065)
chr7 (97-230)||(42187590-42187723)
chr7 (96-229)||(14057626-14057759)
chr7 (96-229)||(14367654-14367787)
chr7 (99-148)||(29653628-29653677)
chr7 (126-230)||(40008431-40008535)
chr7 (96-191)||(1569164-1569259)
chr7 (163-230)||(44855174-44855241)
chr7 (111-230)||(47604029-47604148)
chr7 (128-230)||(2882736-2882838)
chr7 (116-230)||(27648948-27649062)
chr7 (129-227)||(47852268-47852366)
chr7 (96-148)||(28858193-28858245)
chr7 (178-230)||(32631794-32631846)
chr7 (159-231)||(34869631-34869703)
chr7 (109-181)||(36245305-36245376)
chr7 (159-227)||(39812149-39812217)
chr7 (97-192)||(44401165-44401258)
chr7 (159-230)||(2885722-2885793)
chr7 (101-148)||(9191928-9191975)
chr7 (159-230)||(11594171-11594242)
chr7 (159-230)||(12841275-12841346)
chr7 (159-230)||(28208328-28208399)
chr7 (163-230)||(28708596-28708663)
chr7 (159-230)||(31682602-31682673)
chr7 (123-230)||(34341395-34341502)
chr7 (159-230)||(39906372-39906443)
chr7 (96-147)||(41461247-41461298)
chr7 (159-230)||(43491519-43491590)
chr7 (159-230)||(44951366-44951437)
chr7 (159-230)||(47652758-47652829)
chr7 (168-230)||(7273320-7273382)
chr7 (116-230)||(21078085-21078199)
chr7 (116-230)||(29650552-29650666)
chr7 (102-144)||(30144929-30144971)
chr7 (96-138)||(30664716-30664758)
chr7 (160-230)||(31840442-31840512)
chr7 (159-228)||(24777172-24777241)
chr7 (159-228)||(31681022-31681091)
chr7 (189-230)||(33650870-33650911)
chr7 (189-230)||(47413715-47413756)
chr7 (159-227)||(6375079-6375147)
chr7 (186-230)||(14593990-14594034)
chr7 (186-230)||(16013513-16013557)
chr7 (186-230)||(21244283-21244327)
chr7 (187-227)||(30425134-30425174)
chr7 (126-230)||(30814125-30814229)
chr7 (186-230)||(31005443-31005487)
chr7 (186-230)||(31869102-31869146)
chr7 (96-156)||(32368411-32368471)
chr7 (96-192)||(36239834-36239930)
chr7 (186-230)||(37618183-37618227)
chr7 (159-227)||(40149016-40149084)
chr7 (199-231)||(40415264-40415296)
[»] chr5 (40 HSPs)
chr5 (98-230)||(7678628-7678759)
chr5 (98-230)||(7359261-7359392)
chr5 (96-230)||(11675677-11675812)
chr5 (99-231)||(28186781-28186906)
chr5 (100-230)||(38684632-38684762)
chr5 (96-213)||(30588595-30588712)
chr5 (99-218)||(9235198-9235316)
chr5 (116-231)||(43557832-43557947)
chr5 (100-230)||(4026328-4026458)
chr5 (96-221)||(15588399-15588522)
chr5 (96-230)||(27998589-27998723)
chr5 (96-230)||(29922432-29922566)
chr5 (100-229)||(12576861-12576990)
chr5 (115-230)||(418034-418149)
chr5 (159-230)||(5860045-5860116)
chr5 (96-230)||(14667919-14668053)
chr5 (133-230)||(2645175-2645272)
chr5 (123-230)||(18350902-18351009)
chr5 (159-230)||(38132547-38132618)
chr5 (159-230)||(42576221-42576292)
chr5 (173-230)||(14665937-14665994)
chr5 (162-231)||(27386554-27386623)
chr5 (150-230)||(11069162-11069242)
chr5 (159-230)||(1275475-1275546)
chr5 (109-144)||(28005696-28005731)
chr5 (159-230)||(28411887-28411958)
chr5 (159-230)||(29816593-29816664)
chr5 (159-230)||(42272688-42272759)
chr5 (99-230)||(43475390-43475521)
chr5 (186-232)||(3000977-3001023)
chr5 (159-229)||(20456984-20457054)
chr5 (96-138)||(33667583-33667625)
chr5 (186-231)||(3302082-3302127)
chr5 (96-153)||(14749455-14749512)
chr5 (186-231)||(16347379-16347424)
chr5 (186-230)||(408494-408538)
chr5 (186-230)||(4496622-4496666)
chr5 (186-230)||(12492384-12492428)
chr5 (96-148)||(18698942-18698994)
chr5 (186-230)||(28976859-28976903)
[»] chr3 (64 HSPs)
chr3 (109-230)||(29601053-29601174)
chr3 (96-231)||(45289090-45289225)
chr3 (99-197)||(55244429-55244527)
chr3 (109-230)||(388262-388383)
chr3 (98-227)||(49841766-49841895)
chr3 (102-230)||(37534203-37534330)
chr3 (96-230)||(49042084-49042219)
chr3 (159-231)||(30797821-30797893)
chr3 (123-227)||(32170580-32170684)
chr3 (99-230)||(19676081-19676212)
chr3 (132-231)||(31337559-31337658)
chr3 (96-171)||(42026595-42026670)
chr3 (159-230)||(45374477-45374548)
chr3 (129-231)||(40106619-40106721)
chr3 (96-230)||(48508383-48508517)
chr3 (96-225)||(46431684-46431813)
chr3 (162-230)||(37083292-37083360)
chr3 (159-231)||(48734146-48734218)
chr3 (166-230)||(49503568-49503632)
chr3 (159-230)||(22283-22354)
chr3 (100-231)||(15296059-15296190)
chr3 (159-230)||(25191588-25191659)
chr3 (96-171)||(39600740-39600815)
chr3 (99-226)||(50960641-50960768)
chr3 (159-230)||(52139011-52139082)
chr3 (159-230)||(53262352-53262423)
chr3 (99-230)||(54128530-54128661)
chr3 (96-231)||(54364975-54365109)
chr3 (153-231)||(7278669-7278747)
chr3 (117-231)||(11284157-11284271)
chr3 (109-231)||(36304127-36304249)
chr3 (96-138)||(36820069-36820111)
chr3 (96-137)||(2340810-2340851)
chr3 (107-220)||(40116348-40116461)
chr3 (110-231)||(48712074-48712195)
chr3 (159-231)||(24778608-24778680)
chr3 (159-230)||(5169043-5169114)
chr3 (159-230)||(12096705-12096776)
chr3 (159-230)||(35420480-35420550)
chr3 (159-230)||(39208819-39208890)
chr3 (159-230)||(45486849-45486920)
chr3 (114-233)||(46140573-46140692)
chr3 (159-230)||(46148239-46148310)
chr3 (97-227)||(46367390-46367521)
chr3 (159-230)||(53519791-53519862)
chr3 (98-148)||(17120614-17120664)
chr3 (96-138)||(19162679-19162721)
chr3 (96-181)||(21200696-21200779)
chr3 (97-155)||(33700332-33700390)
chr3 (96-138)||(41087892-41087934)
chr3 (176-230)||(49933440-49933494)
chr3 (100-181)||(26490467-26490548)
chr3 (103-148)||(29475841-29475886)
chr3 (186-231)||(31566160-31566205)
chr3 (162-227)||(41529975-41530040)
chr3 (161-226)||(52927852-52927917)
chr3 (186-230)||(311309-311353)
chr3 (159-231)||(38850332-38850404)
chr3 (186-230)||(39512781-39512825)
chr3 (96-168)||(40116530-40116602)
chr3 (126-230)||(40991609-40991713)
chr3 (124-192)||(41971308-41971376)
chr3 (186-230)||(48532196-48532240)
chr3 (109-169)||(50237695-50237755)
[»] scaffold0373 (1 HSPs)
scaffold0373 (96-171)||(2360-2435)
[»] scaffold0570 (1 HSPs)
scaffold0570 (96-230)||(948-1082)
[»] scaffold1259 (1 HSPs)
scaffold1259 (150-230)||(1522-1602)
[»] scaffold0018 (2 HSPs)
scaffold0018 (96-138)||(178512-178554)
scaffold0018 (186-230)||(31706-31750)
[»] scaffold0015 (1 HSPs)
scaffold0015 (105-181)||(66694-66771)
[»] scaffold0010 (1 HSPs)
scaffold0010 (100-229)||(160325-160454)
[»] scaffold0041 (1 HSPs)
scaffold0041 (159-231)||(16789-16861)
[»] scaffold0168 (1 HSPs)
scaffold0168 (159-230)||(28889-28960)
[»] scaffold0157 (1 HSPs)
scaffold0157 (159-230)||(25532-25603)
[»] scaffold0491 (1 HSPs)
scaffold0491 (159-224)||(3648-3713)
[»] scaffold0325 (1 HSPs)
scaffold0325 (96-137)||(11945-11986)
[»] scaffold0024 (1 HSPs)
scaffold0024 (159-232)||(82929-83002)


Alignment Details
Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 29548811 - 29548629
Alignment:
Q  54 ggtagtcaaatcacgagaagcagaggaagacctnnnnnnnnnctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggt 153  Q
    |||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  29548811 ggtagtcaaatcacgagaagcagaggaagacctgaaaaaa--ctataagagaaattattaagaaagatttagagattaatgtgtttgatagaaatgtggt 29548714  T
Q  154 ataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgtacatatgt 238  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  29548713 ataatatagaaaattatgacgtagtttggtctatgtagttgaccatacttggtgggataatgtttggttgttgttgtacatatgt 29548629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 8197671 - 8197541
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| ||||||||||||| || ||||||||||||| ||||||||| || ||||  |||||| |||||| ||| ||||| || ||||||| |||| |    
T  8197671 aagagaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccct 8197572  T
Q  200 acttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||||||||||||||||||||||    
T  8197571 acttagtgggataatgcttggttgttgttgt 8197541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 8202431 - 8202301
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| ||||||||||||| || ||||||||||||| ||||||||| || ||||  |||||| |||||| ||| ||||| || ||||||| |||| |    
T  8202431 aagagaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccct 8202332  T
Q  200 acttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||||||||||||||||||||||    
T  8202331 acttagtgggataatgcttggttgttgttgt 8202301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 33504371 - 33504502
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagatt-aatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctg 194  Q
    |||||||||||| ||||||||||||| |||||||| ||| |||| ||| ||||| |||||||  ||||||||||||| |||| |||| || || |||| |    
T  33504371 ctataagagaaactattaagaaagatctagagatttaataagttggattgaaatatggtatatgatagaacattatggcgtaatttgatccatctagccg 33504470  T
Q  195 accgtacttagtgggataatgcttggttgttg 226  Q
    |||  |||||||||||||| ||||||||||||    
T  33504471 accccacttagtgggataaggcttggttgttg 33504502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 9496014 - 9496148
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| |||| |||||||| ||||| |||||||||| |||  |||| |||| ||  ||||||||||||| |||| |||| || |||||||  |    
T  9496014 ctataagagaaactattcagaaagatttagaggttaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaa 9496113  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  ||||||||||| || ||||||||||||||||    
T  9496114 ccccacttagtgggacaaggcttggttgttgttgt 9496148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 228
Target Start/End: Complemental strand, 12026139 - 12026014
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||       ||| || ||||| |||| ||||| || ||||||||||    
T  12026139 ctataggagaaactattaagaaagatctagagattaatgagtttgatagaaatatg-------ataaaatattataacgtcgtttgatccatgtagctga 12026047  T
Q  196 ccgtacttagtgggataatgcttggttgttgtt 228  Q
    ||  |||||||||||||| | ||||||||||||    
T  12026046 ccccacttagtgggataaagtttggttgttgtt 12026014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 33287569 - 33287703
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||||| |||| ||||||||||| ||| ||||| |||| ||  ||||||||||||||| ||||||| ||  ||||||  |    
T  33287569 ctataagagaaactattaagaaagatctagaaattaatgagttagatcgaaatatggtttatgatagaacattatgacatagtttgatccttgtagccaa 33287668  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |   ||||||||||| ||  |||||||||||||||    
T  33287669 ctccacttagtgggacaagacttggttgttgttgt 33287703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 230
Target Start/End: Original strand, 38435104 - 38435234
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| ||||||||||||| |||||||||||| ||| ||| ||||| |||| ||  || |||||||||| |||| |||| || ||||||| || |      
T  38435104 aagagaaactattaagaaagatctagagattaatgtgttggatcgaaatttggtttatgattgaacattatggcgtaatttgatccatgtagccgatccc 38435203  T
Q  200 acttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||| |||| ||||||||||||||||    
T  38435204 acttagtggcataaggcttggttgttgttgt 38435234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 43832246 - 43832380
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||| ||| |||||||||||||||| ||||   || || | || |||||||||||||||||   |||| || ||||||||||    
T  43832246 ctataagagaaactattaagaaggatctagagattaatgagttggataaggatatgatgtattatagaacattatgacggcatttgatccatgtagctga 43832345  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||  ||||| ||||||||||||||||    
T  43832346 cccaacttagtttgataaggcttggttgttgttgt 43832380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 45543206 - 45543074
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| |||||  |||||| ||||| | |||||||| |||  |||| |||| ||  ||||||||||||| |||| |||| |||||||||| ||    
T  45543206 ctataagagaaactattagaaaagatttagaggt-aatgagttcgatccaaatatggtttatgatagaacattatggcgtactttgatctatgtagccga 45543108  T
Q  196 ccgtacttagtgggataatgcttggttgttgttg 229  Q
    ||  |||||||||||||||||||| |||||||||    
T  45543107 ccccacttagtgggataatgcttgcttgttgttg 45543074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 37470267 - 37470150
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| || |||| |||||||||||||||| ||| ||||| ||| |||  |||||||||||||  |||||||| || |||||||| |    
T  37470267 ctataagagaaactattaggacagatctagagattaatgagttggatcgaaatatggcatatgatagaacattatggtgtagtttgatccatgtagctaa 37470168  T
Q  196 ccgtacttagtgggataa 213  Q
     |  ||||||||||||||    
T  37470167 tcccacttagtgggataa 37470150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 103 - 227
Target Start/End: Complemental strand, 19337020 - 19336896
Alignment:
Q  103 agaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtact 202  Q
    ||||| ||| ||||||||| |||||||||||||||| ||| ||||| |||| ||  ||||||||||||| |||| |||| || |||||||  | |  |||    
T  19337020 agaaactataaagaaagatttagagattaatgagttggatcgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaatcccact 19336921  T
Q  203 tagtgggataatgcttggttgttgt 227  Q
    || |||||||| |||||||||||||    
T  19336920 tattgggataaagcttggttgttgt 19336896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 226
Target Start/End: Complemental strand, 19235118 - 19234988
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| |||| |||||||| ||||||||||||| || ||||||||| ||||||   |||||||||| || ||| ||||  || |||||||  |    
T  19235118 ctataagagaaactattgagaaagatctagagattaatgatttggatagaaatatggtatttgatagaacattctgtcgtcgtttaatccatgtagccaa 19235019  T
Q  196 ccgtacttagtgggataatgcttggttgttg 226  Q
    |   |||||||||||||| |||| |||||||    
T  19235018 ctccacttagtgggataaggcttagttgttg 19234988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 3481307 - 3481436
Alignment:
Q  101 agagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgta 200  Q
    ||||||| ||||| ||||||| | || |||||  |||| || |||||| |||| ||  ||||||||||||| |||| |||| || ||||||||||||  |    
T  3481307 agagaaactattaggaaagatttggaaattaacaagttggacagaaatatggtctatgatagaacattatggcgtaatttgatccatgtagctgacccca 3481406  T
Q  201 cttagtgggataatgcttggttgttgttgt 230  Q
    |||||| ||| || ||||||||||||||||    
T  3481407 cttagttggaaaaggcttggttgttgttgt 3481436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 229
Target Start/End: Original strand, 18959063 - 18959192
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| ||| | ||||||  | |||||||||||||| |||  |||| |||| ||  ||||||||||||| | || |||| || ||||||||||||      
T  18959063 aagagaaactataaggaaagacttggagattaatgagttggatcaaaatatggtctatgatagaacattatggcataatttgatccatgtagctgacccc 18959162  T
Q  200 acttagtgggataatgcttggttgttgttg 229  Q
    |||||||||||||| |||||||| ||||||    
T  18959163 acttagtgggataaggcttggttattgttg 18959192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 26784474 - 26784414
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtata 156  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  |||||||| |||||||    
T  26784474 ctataagagaaactattaagaaagatatagagattaatgagttgaatagaaatatggtata 26784414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 42149793 - 42149709
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttg 181  Q
    ||||||||||| ||||||||||||| ||||||||| |||| | ||||||||| |||| ||  ||||||||||||| |||| ||||    
T  42149793 tataagagaaactattaagaaagatctagagattattgagctggatagaaatatggtttatgatagaacattatggcgtaatttg 42149709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 42092665 - 42092796
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||| |||||| |||||| |||||||||||||||||| |||| |||||  ||  | ||||  |||||  ||| || ||| ||||| || ||||||||||    
T  42092665 ctataggagaaactattaaaaaagatgtagagattaattagttggatagtgatacgatatatgatagaggattgtggcgttgtttgatccatgtagctga 42092764  T
Q  196 ccgtacttagtgggataatgcttggttgttgt 227  Q
    || |||||||| |||| | |||||||||||||    
T  42092765 ccctacttagtaggattaggcttggttgttgt 42092796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 12882179 - 12882045
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| || || |||| || ||||| |||||||||| |||  |||| |||| |   |||||||||| || |||| |||| || |||||||  |    
T  12882179 ctataagagaaactactaggaaatatttagaggttaatgagttggatccaaatatggtttgtgatagaacattttggcgtaatttgatccatgtagccta 12882080  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| ||||||||||||||||    
T  12882079 cctcacttagtgggataaggcttggttgttgttgt 12882045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 1626343 - 1626460
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  ||| |||| || ||||  ||||||||||   |||| ||||| || |||| || ||    
T  1626343 ctataagagaaactattaagaaagatctagagattaatgagttgtataaaaatatgatatataatagaacattgcaacgttgtttgatccatgtggccga 1626442  T
Q  196 ccgtacttagtgggataa 213  Q
     | |||||||||| ||||    
T  1626443 tcctacttagtggtataa 1626460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 9531668 - 9531600
Alignment:
Q  162 gaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  9531668 gaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 9531600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 11992179 - 11992107
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||||||||| |||  |||| || ||||||||||||  ||||||||| |||| |||||||||||||||||    
T  11992179 atagaacattatggcgttatttgatccatgtagctgaccccacttagtggaataaggcttggttgttgttgta 11992107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 222
Target Start/End: Original strand, 19024328 - 19024452
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    |||||||||| ||||||||||||| || ||||||||||||| |||| ||||    |||   ||||||| ||||| ||| ||||| ||||| |||| ||||    
T  19024328 ataagagaaactattaagaaagatctaaagattaatgagttggatataaatacaatatttgatagaactttatggcgtcgtttgatctatatagccgacc 19024427  T
Q  198 gtacttagtgggataatgcttggtt 222  Q
      ||| |||||||||| ||||||||    
T  19024428 ccactcagtgggataaggcttggtt 19024452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 887136 - 887065
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataat-gcttggttgttgttg 229  Q
    ||||||||||||| |||| |||| || ||||||||||||  |||| |||||||||| |||||||||||||||    
T  887136 atagaacattatggcgtaatttgatccatgtagctgaccccacttggtgggataatggcttggttgttgttg 887065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 228
Target Start/End: Complemental strand, 35755383 - 35755247
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagag----attaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtag 191  Q
    |||||| ||||| ||||| ||||||| |||||    ||||||| ||| |||  |||| |||| ||  |||||||||| || |||| |||| || ||| ||    
T  35755383 ctataacagaaactattaggaaagatttagaggttaattaatgggttggatccaaatatggtttatgatagaacattgtgccgtaatttgatccatgcag 35755284  T
Q  192 ctgaccgtacttagtgggataatgcttggttgttgtt 228  Q
    | |||| ||||||||||||||| ||||||||||||||    
T  35755283 ccgaccctacttagtgggataaggcttggttgttgtt 35755247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 9556503 - 9556369
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||| ||| ||||||||||||| ||| |||||||||||| |||  | || |||| ||  ||||||||||| |  ||| |||| |  ||||||| ||    
T  9556503 ctataagataaactattaagaaagatctagtgattaatgagttggatcaagatatggtttatgatagaacattagggtgtaatttgatacatgtagccga 9556404  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |   |||||||||||| | ||||||||||||||||    
T  9556403 ctccacttagtgggatgaggcttggttgttgttgt 9556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 44437855 - 44437721
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||| |||||| ||||||||| ||| ||||||| |||||||| || | |||  |||| |   |||||||| |||| ||| ||||  |  ||||||| ||    
T  44437855 ctatatgagaaactattaagaaggatctagagataaatgagttggagaaaaacatggtttttgatagaacactatggcgttgtttaattcatgtagccga 44437756  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| ||||||||||||||||    
T  44437755 ccccacttagtgggataaggcttggttgttgttgt 44437721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 10516813 - 10516748
Alignment:
Q  166 attatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||| |||| |||| || |||||||||| |  |||||||||||||| |||||||||||||||||    
T  10516813 attatggcgtaatttgatccatgtagctgatctcacttagtgggataaggcttggttgttgttgta 10516748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 17429252 - 17429333
Alignment:
Q  150 tggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||  ||||||||||||||| || |||| |  ||||||| ||||  |||||||| ||||| |||||||||||||||||    
T  17429252 tggtatatgatagaacattatgacataatttgattcatgtagccgaccccacttagtgagataaggcttggttgttgttgta 17429333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 34931643 - 34931712
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgtt 228  Q
    ||||||||||||| | || |||| || || |||| ||||||||||||||||| || ||||||||||||||    
T  34931643 atagaacattatggcataatttgatccatatagccgaccgtacttagtgggacaaggcttggttgttgtt 34931712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 41779243 - 41779202
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  41779243 tataagagaaattattaaaaaagatctagagattaatgagtt 41779202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 42582557 - 42582520
Alignment:
Q  111 ttaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    |||| |||||||||||||||||||||||||||||||||    
T  42582557 ttaaaaaagatgtagagattaatgagtttgatagaaat 42582520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 12474998 - 12474926
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  12474998 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 12474926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 32706495 - 32706527
Alignment:
Q  200 acttagtgggataatgcttggttgttgttgtac 232  Q
    |||||||||||||||||||||||||||||||||    
T  32706495 acttagtgggataatgcttggttgttgttgtac 32706527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 43573198 - 43573130
Alignment:
Q  162 gaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||| ||||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  43573198 gaacgttatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43573130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 227400 - 227471
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  227400 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 227471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 3635394 - 3635323
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  3635394 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 3635323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 4807806 - 4807877
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  4807806 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 4807877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 12520129 - 12520062
Alignment:
Q  163 aacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||| |||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  12520129 aacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12520062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 18188901 - 18188952
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    ||||||||||| |||| |||||||| |||||||||||||| | |||||||||    
T  18188901 tataagagaaactattcagaaagatctagagattaatgagctggatagaaat 18188952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 28508889 - 28508960
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  28508889 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28508960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 30306243 - 30306314
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  30306243 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30306314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 31959669 - 31959804
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||||||||||  ||||  || ||| ||||| | |||||||| |||  |||| |||| ||  |||||||| |||| | || |||| || ||||||| ||    
T  31959669 ctataagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcataatttgatccatgtagcaga 31959768  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  ||||||| |||||| |||||||||||||||||    
T  31959769 ccccacttagtaggataaggcttggttgttgttgta 31959804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 32402668 - 32402723
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    |||||| |||||||||||||||| |||||||||  ||||||  |||||||||||||    
T  32402668 aaagatctagagattaatgagttggatagaaataaggtatatgatagaacattatg 32402723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 36993751 - 36993817
Alignment:
Q  164 acattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||||||||| |||| || |||||||  |||  |||||||||||||| |||||||||||||||||    
T  36993751 acattatgacgtaatttgatccatgtagcctacca-acttagtgggataaggcttggttgttgttgta 36993817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 37452347 - 37452284
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatga 172  Q
    ||||||||||||  |||||||||||||||| || |||||| |||| ||  ||||||||||||||    
T  37452347 tattaagaaagaattagagattaatgagttggacagaaatatggtttatgatagaacattatga 37452284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 12141692 - 12141826
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||| |||||| ||||| ||||||  ||||||||||||| || |||  |||| |||||||  ||||||||||||| | |  |||| || |||||||  |    
T  12141692 ctataggagaaactattaggaaagacttagagattaatgacttggatccaaatatggtatatgatagaacattatggcatgatttgatcgatgtagccaa 12141791  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  | |||||||| ||| ||||| ||||||||||    
T  12141792 ccccatttagtggggtaaggcttgattgttgttgt 12141826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 14530532 - 14530562
Alignment:
Q  200 acttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||||||||||||||||||||||    
T  14530532 acttagtgggataatgcttggttgttgttgt 14530562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 17670680 - 17670750
Alignment:
Q  160 tagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  17670680 tagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 17670750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 26670916 - 26670958
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||    
T  26670916 ctataaaagaaactattaagaaagatttagagattaatgagtt 26670958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 33625325 - 33625247
Alignment:
Q  103 agaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttg 181  Q
    ||||| |||||||||| || |||||||||||||||| || || ||| |||| ||  |||||||||||||| ||| ||||    
T  33625325 agaaactattaagaaatatctagagattaatgagttggaaagtaatatggtttatgatagaacattatgaagtaatttg 33625247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 11412869 - 11412992
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtata--ata-tagaacattatgacgtagtttggtctatgtagctgaccgtacttag 205  Q
    ||||| ||||||| |||||||||||||||| |||  |||| |||| ||  ||| ||||||||||||  ||| |||| || ||||||| || |  ||||||    
T  11412869 tattaggaaagat-tagagattaatgagttggatccaaatatggtttatgatagtagaacattatggtgtaatttgatccatgtagccgaactcacttag 11412967  T
Q  206 tgggataatgcttggttgttgttgt 230  Q
    | |||||| ||||||||||||||||    
T  11412968 taggataaggcttggttgttgttgt 11412992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 13240884 - 13240763
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| |||||||||| |||||  || ||||| |||| ||  ||| | ||||||| ||| ||||| ||  ||| || ||||   ||||||||    
T  13240884 tattaagaaagatctagagattaacgagttgaatcgaaatttggtttatgataaaccattatgccgttgtttgatccgtgtcgccgacccagcttagtgg 13240785  T
Q  209 gataatgcttggttgttgttgt 230  Q
    ||||| |||||||| |||||||    
T  13240784 gataaggcttggttattgttgt 13240763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 23915827 - 23915742
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttg 181  Q
    |||||||||||| |||||||||| || |||||||||||||| | || |||| | |||| ||  |||||||| |||| |||| ||||    
T  23915827 ctataagagaaactattaagaaaaatctagagattaatgaggtggacagaactatggtttatgatagaacactatggcgtaatttg 23915742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 38452730 - 38452685
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  38452730 atgtagccgaccccacttagtgggataaggcttggttgttgttgta 38452685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 45077888 - 45078008
Alignment:
Q  109 tattaagaaagatgtagagattaat--gagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagt 206  Q
    ||||||||||||| |||||||||||  ||||| ||| ||||| | || ||  ||||||||| ||| | || |||| || ||||| | ||||  |||||||    
T  45077888 tattaagaaagatttagagattaatgagagttggatcgaaatatagtttatgatagaacataatggcataatttgatccatgtaaccgaccccacttagt 45077987  T
Q  207 gggataatgcttggttgttgt 227  Q
    | ||||| |||||||||||||    
T  45077988 gagataaagcttggttgttgt 45078008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 2515243 - 2515171
Alignment:
Q  158 tatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| |||||| |||| |||| ||||| |||| ||||  |||||||||||||| ||||| |||| |||||    
T  2515243 tatagaatattatggcgtactttgatctatctagccgaccccacttagtgggataaggcttgtttgtcgttgt 2515171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 6219127 - 6219247
Alignment:
Q  110 attaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtggg 209  Q
    |||| ||||||| ||||||||| |||||| ||  ||||| |||| ||  |||||||||||||  ||| |||| || |||||||  |||  || |||| ||    
T  6219127 attaggaaagatttagagattagtgagttggaccgaaatatggtttatgatagaacattatggtgtaatttgatccatgtagccaaccccacctagttgg 6219226  T
Q  210 ataatgcttggttgttgttgt 230  Q
    |||| ||||||||||| ||||    
T  6219227 ataaggcttggttgttattgt 6219247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 12489846 - 12489802
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  12489846 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 12489802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 15775897 - 15775845
Alignment:
Q  178 tttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||||| ||||  ||||||||| |||| ||||||||||||||||    
T  15775897 tttggtccatgtagccgaccccacttagtggaataaggcttggttgttgttgt 15775845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 25384679 - 25384751
Alignment:
Q  158 tatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||| |||| |||| |||| || |||||||  |||  |||||||||||||| ||||||| ||||||||    
T  25384679 tatagaacactatggcgtaatttgatccatgtagccaacctcacttagtgggataaggcttggtggttgttgt 25384751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 25834916 - 25834960
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  25834916 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 25834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 35643186 - 35643230
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  35643186 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 35643230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 38328414 - 38328370
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  38328414 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 38328370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 38860328 - 38860368
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||||||| ||||||||||||| |||||||| |||||||    
T  38860328 ataagagaaactattaagaaagatctagagattcatgagtt 38860368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 41763087 - 41763043
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  41763087 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 41763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 45483037 - 45482989
Alignment:
Q  178 tttggtctatgtagctgaccgtacttagtgggataatgcttggttgttg 226  Q
    |||| |||||||||| ||||  |||||||||||||| ||||||||||||    
T  45483037 tttgatctatgtagccgaccccacttagtgggataaggcttggttgttg 45482989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 38869030 - 38869164
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||||||||||||||||| ||| |||||||| ||| |||||| || |||||||  ||||||||||||| ||| ||||| || ||||||| ||    
T  38869030 ctataagagaaattattaagaaagatctagcgattaatgggttggatagatatatggtatatgatagaacattatggcgtcgtttgatccatgtagccga 38869129  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  ||||||||||| |||||||||||| ||||||    
T  38869130 ccccacttagtgggaaaatgcttggttgctgttgt 38869164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 8796360 - 8796491
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    ||||||||| ||||||||||||| |||| |||||||| || ||| ||||| |||| ||  ||||||||||||| |||| |||  || ||||||| ||||     
T  8796360 taagagaaactattaagaaagatctagatattaatgacttggattgaaatatggtttatgatagaacattatggcgtaatttaatccatgtagccgaccc 8796459  T
Q  199 tacttagtgggataatgcttggttgttgttgt 230  Q
     |||||||||||||| ||||||||||||||||    
T  8796460 cacttagtgggataaggcttggttgttgttgt 8796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 42501256 - 42501387
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||| ||| |||  |||||||||||   ||| ||||  || ||||||| ||    
T  42501256 ctataagagaaattattaagaaagatctatagattaatgagttggatagaaatatggaatatgatagaacattacagcgtcgtttaatccatgtagccga 42501355  T
Q  196 ccgtacttagtgggataatgcttggttgttgt 227  Q
    || ||||||||||||||| | |||||| ||||    
T  42501356 ccctacttagtgggataaagtttggttattgt 42501387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 3818990 - 3818856
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  |||||||| |||| ||  || |||||||||| ||   |||| || ||||||| ||    
T  3818990 ctataagagaaactattaagaaagatttagagattaatgagttgaatagaaatatggtttatgatggaacattatgtcgccatttgatccatgtagccga 3818891  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    | | |||||||||||||| ||||||| ||||||||    
T  3818890 ctgcacttagtgggataaggcttggtcgttgttgt 3818856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 31274519 - 31274401
Alignment:
Q  112 taagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggat 211  Q
    |||||||||| |||||||| ||||||| ||| ||||| |||| ||  ||| ||| ||||| |||| |||| ||| |||||||||||  ||||||||||||    
T  31274519 taagaaagatctagagatttatgagttagattgaaatatggtttatgatataacgttatggcgtaatttgatctgtgtagctgaccccacttagtgggat 31274420  T
Q  212 aatgcttggttgttgttgt 230  Q
    |||||||||||||||||||    
T  31274419 aatgcttggttgttgttgt 31274401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 41560377 - 41560511
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| || | || |||||||||||||||| |||  |||| |||  ||  ||||||||||||| |||| |||| || ||||||| ||    
T  41560377 ctataagagaaactattaggatacatttagagattaatgagttggatccaaatatgggttatgatagaacattatggcgtaatttgatccatgtagccga 41560476  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| ||||||||||||||||    
T  41560477 ccccacttagtgggataaggcttggttgttgttgt 41560511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 5338879 - 5338995
Alignment:
Q  114 agaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataa 213  Q
    |||||||| |||||||||||||||| ||| |||||||| | || |||||||||||||| |||| |||| || |||||||  |||  |||||||| |||||    
T  5338879 agaaagatctagagattaatgagttggatcgaaatgtgatttattatagaacattatggcgtaatttgatccatgtagccaacctcacttagtgagataa 5338978  T
Q  214 tgcttggttgttgttgt 230  Q
     ||| ||||||||||||    
T  5338979 ggctcggttgttgttgt 5338995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 33560989 - 33560857
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    |||| |||| ||||||| ||||| |||||||||  ||||| |||| |||| |||||||  | ||||||||||||| | ||||| || |||||||  |||     
T  33560989 taagggaaactattaagtaagatctagagattagcgagttggatataaatatggtatatcagagaacattatgacattgtttgatccatgtagccaaccc 33560890  T
Q  199 tacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||||||||||| |||||| ||||||||||    
T  33560889 tacttagtgggataaggcttggctgttgttgta 33560857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 7124289 - 7124406
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| |||| |||||||| ||  ||||||||| || ||||||||| |||||||  ||||| |||||||  || ||||| || ||||||||||    
T  7124289 ctataagagaaactattgagaaagatctattgattaatgaattggatagaaatatggtataggatagagcattatggtgtcgtttgatccatgtagctga 7124388  T
Q  196 ccgtacttagtgggataa 213  Q
    ||  ||||||||||||||    
T  7124389 cctcacttagtgggataa 7124406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 6025713 - 6025887
Alignment:
Q  54 ggtagtcaaatcacgagaagcagaggaagacctnnnnnnnnnctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggt 153  Q
    |||||||||||||| ||| ||||||||||||||         |||||||||| | || ||| |||||| |||||||||||||||| ||||||||| ||||    
T  6025713 ggtagtcaaatcactagaggcagaggaagacctagaaaaa--ctataagagatactagtaaaaaagatctagagattaatgagttggatagaaatatggt 6025810  T
Q  154 ataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||   ||||||||| ||| |||  |||| || ||||||| ||    ||||||||||||||| |||||||||| ||||    
T  6025811 atctgatagaacatgatggcgtcatttgatccatgtagccgattccacttagtgggataatacttggttgtttttgt 6025887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 228
Target Start/End: Complemental strand, 37463009 - 37462878
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||||||||||  || | ||| ||| ||||| ||||||||||||||  |||| |||| ||  ||||||||||||| |||| |||| || ||||||| ||    
T  37463009 ctataagagaaacgatcaggaatgatttagaggttaatgagtttgatc-aaatatggtttatcatagaacattatggcgtaatttgatccatgtagccga 37462911  T
Q  196 ccgtacttagtgggataatgcttggttgttgtt 228  Q
    ||  |||||||||||||| ||||||||||||||    
T  37462910 ccccacttagtgggataaggcttggttgttgtt 37462878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 8343015 - 8342885
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||||||||||  ||||| |||||| |||||||||||||||| ||||||||| | ||||   || ||||||||||||   ||||| || ||||| ||||    
T  8343015 ctataagagaaacaattaataaagatctagagattaatgagttggatagaaatatagtatttgatggaacattatgac---gtttgatcaatgtatctga 8342919  T
Q  196 ccgtacttagtgggataatgcttggttgttgttg 229  Q
     |  |||||||||||||| ||||| |||||||||    
T  8342918 tcccacttagtgggataaggcttgattgttgttg 8342885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 34444531 - 34444638
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    |||||||||||||||| |||  |||| |||| ||  ||| |||||||||  ||| |||| |||||||||| ||||  |||||||||||||| ||||||||    
T  34444531 tagagattaatgagttggatccaaatatggtttataataaaacattatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttggtt 34444630  T
Q  223 gttgttgt 230  Q
    ||||||||    
T  34444631 gttgttgt 34444638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 39140669 - 39140794
Alignment:
Q  102 gagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtac 201  Q
    |||||| ||||| |||| || ||||| ||||| |||| |||  |||| |||| | | ||||||||||||| |||| |||| |  ||||||| ||||  ||    
T  39140669 gagaaactattaggaaaaatttagaggttaattagttggatccaaatatggtttcagatagaacattatggcgtaatttgattcatgtagccgaccccac 39140768  T
Q  202 ttagtgggataatgcttggttgttgt 227  Q
    ||||||||||||||||||||||||||    
T  39140769 ttagtgggataatgcttggttgttgt 39140794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 43375719 - 43375598
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| |||||||||||||||| ||  ||||| ||||  |  ||||||||||||||| || |||| || |||||||  | |  |||||||||    
T  43375719 tattaagaaagatttagagattaatgagttggaccgaaatatggttcatgatagaacattatgacataatttgatccatgtagccaatcccacttagtgg 43375620  T
Q  209 gataatgcttggttgttgttgt 230  Q
    ||||| | ||||||||||||||    
T  43375619 gataaagattggttgttgttgt 43375598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 227
Target Start/End: Complemental strand, 52532748 - 52532619
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    |||||||||| ||||| ||||||| |||| ||||||||||| ||   |||| |||| ||  ||||||||||||| |||| |||| |  ||||||| ||||    
T  52532748 ataagagaaactattaggaaagatttagaaattaatgagttggaacaaaatatggtttatgatagaacattatggcgtaatttgattcatgtagccgacc 52532649  T
Q  198 gtacttagtgggataatgcttggttgttgt 227  Q
      ||||||||||| || |||||||||||||    
T  52532648 ccacttagtgggaaaaggcttggttgttgt 52532619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 52561723 - 52561590
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| | ||| ||||||| ||||| |||||||||| |||  |||| |||| |    |||||||||||| || | |||| || ||||||| ||    
T  52561723 ctataagagaaactgttaggaaagatttagaggttaatgagttggatccaaatatggtttcgggtagaacattatggcgaaatttgatccatgtagccga 52561624  T
Q  196 ccgtacttagtgggataatgcttggttgttgttg 229  Q
    ||  |||||||||||||| |||||||||||||||    
T  52561623 ccccacttagtgggataaggcttggttgttgttg 52561590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 6299526 - 6299478
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgataga 145  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  6299526 tataagagaaattgttaagaaagatctagagattaatgagtttgataga 6299478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 27072607 - 27072491
Alignment:
Q  110 attaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtggg 209  Q
    |||| ||||||| |||| ||||| ||||| || |||||| |||| ||  ||||||||||||| |||| |||| || ||||||| |||| | |||||||||    
T  27072607 attaggaaagatttagaaattaaagagttggacagaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccatgcttagtggg 27072508  T
Q  210 ataatgcttggttgttg 226  Q
    | || ||||||||||||    
T  27072507 aaaaggcttggttgttg 27072491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 36339937 - 36339803
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataat-atagaacattatgacgtagtttggtctatgtagctg 194  Q
    |||| ||||||| ||||| ||||||| | || ||||||||||| || |||||  |||| |||| ||| |||||||||| ||| |||| || |||||||||    
T  36339937 ctatcagagaaactattaggaaagattt-gaaattaatgagttggacagaaacatggt-taatgataaaacattatgaagtaatttgatccatgtagctg 36339840  T
Q  195 accgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||   ||||||||||| ||||||||||||||||||||    
T  36339839 actccacttagtgggaaaatgcttggttgttgttgta 36339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 13827687 - 13827620
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgta 190  Q
    |||||||||||||||| ||||||||| |||||||  ||||||||||||||||| ||||  ||||||||    
T  13827687 tagagattaatgagttggatagaaatatggtatatgatagaacattatgacgttgtttcatctatgta 13827620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 25715432 - 25715325
Alignment:
Q  124 agagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttg 223  Q
    |||||||||||||||  |  ||||| |||| ||  |||||| |||||| |||| |||| || ||||||| ||||  |||||||||||||| |||||||||    
T  25715432 agagattaatgagttgaaccgaaatatggtttatgatagaatattatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttg 25715333  T
Q  224 ttgttgta 231  Q
    ||||||||    
T  25715332 ttgttgta 25715325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 210
Target Start/End: Complemental strand, 9599524 - 9599414
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| ||||| |||| || ||||| ||||||||||||||  | || |||| ||  ||||||| ||||| |||| |||| || |||||||||||| |    
T  9599524 aagagaaactattaggaaatatttagagtttaatgagtttgatccagatatggtttatgatagaacgttatggcgtaatttgatccatgtagctgacctt 9599425  T
Q  200 acttagtggga 210  Q
    |||||||||||    
T  9599424 acttagtggga 9599414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 32404660 - 32404527
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||  ||  |||  |||| ||  ||| ||||| ||| |||| |||| || ||||||| ||    
T  32404660 ctataagagaaactattaggaaagatttagagattaatgagttaaatccaaacatggtttatgatataacataatggcgtaatttgatccatgtagccga 32404561  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| || |||||||||||||    
T  32404560 ccccacttagtgggataaggc-tggttgttgttgt 32404527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 4590653 - 4590533
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| || ||||| ||||||| |||||| || || |||   |||||||| ||||  ||| |||| || ||||||| ||||  |||||||||    
T  4590653 tattaagaaagatttatagattgatgagttggatagatatatgatatgtgatagaacaatatggtgtaatttgatccatgtagccgaccccacttagtgg 4590554  T
Q  209 gataatgcttggttgttgttg 229  Q
    ||||| | |||||||||||||    
T  4590553 gataaggtttggttgttgttg 4590533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 21769782 - 21769710
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||||||||| |||| |||| || ||||||| ||||  |||||||| ||||| |||||||||||||||||    
T  21769782 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgtgataaggcttggttgttgttgta 21769710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 30834111 - 30834059
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  30834111 ctataagagaaactattacgaaagatctagagattaatgagttggatagaaat 30834059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 4707327 - 4707221
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    ||||| |||||||||| |||  |||| |||| ||  |||||||| |||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||    
T  4707327 tagaggttaatgagttggatccaaatttggtttatgatagaacactatggcgtaatttgatc-atgtagccgaccccacttagtgggataaggcttggtt 4707229  T
Q  223 gttgttgt 230  Q
    ||||||||    
T  4707228 gttgttgt 4707221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 28090765 - 28090694
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||| |||| || ||||||| ||||  ||||||||||||||  |||||||||||||||    
T  28090765 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgt 28090694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 38807742 - 38807671
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  38807742 atagaacactatggcgtaatttgttccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 38807671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 40416519 - 40416594
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    |||||||| ||| ||||||||||||| || ||||||||||||| ||| ||||| |||| ||  |||||||||||||    
T  40416519 ctataagacaaactattaagaaagatctatagattaatgagttggatcgaaatatggtttatgatagaacattatg 40416594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 44941847 - 44941776
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  44941847 atagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 44941776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 50846773 - 50846844
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| | || |||| |||||||||| |||   ||||||||||| |||||||||||||||||||    
T  50846773 atagaacattatggcataatttgatctatgtagccgacaccacttagtgggaaaatgcttggttgttgttgt 50846844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 6084147 - 6084257
Alignment:
Q  120 atgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttg 219  Q
    ||||||||||||||||||| |||  |||| |||| ||  |||||||| |||| |||| |||| || |||||  ||| |  |||||||||||||| |||||    
T  6084147 atgtagagattaatgagttggatcaaaatatggtttatgatagaacaatatggcgtaatttgatccatgtatttgatctcacttagtgggataaggcttg 6084246  T
Q  220 gttgttgttgt 230  Q
    |||||| ||||    
T  6084247 gttgttattgt 6084257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 10200420 - 10200306
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatg 215  Q
    |||||| |||||||  ||||||| |||  |||| |||| ||  ||||||||| |||  ||| |||| || ||||||| ||||  ||||| ||||||||||    
T  10200420 aaagatttagagatcgatgagttggatccaaatatggtttatgatagaacatcatggtgtaatttgatccatgtagccgacctcacttaatgggataatg 10200321  T
Q  216 cttggttgttgttgt 230  Q
    |||||||||||||||    
T  10200320 cttggttgttgttgt 10200306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 48861484 - 48861392
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataat--atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataa 213  Q
    |||||||||||||||| ||||||||| ||||||| |  ||||| ||||||||||| ||||| |  |||| || ||||  ||||||||||||||    
T  48861484 tagagattaatgagttggatagaaatatggtatatttgatagagcattatgacgtcgtttgattcatgtcgccgaccccacttagtgggataa 48861392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 2914191 - 2914123
Alignment:
Q  162 gaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||| |||| |||| || |||||||  |||  |||||||||||||| ||||||||||||||||    
T  2914191 gaacattatggcgtactttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgt 2914123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 10569203 - 10569131
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattat 170  Q
    |||| ||||| ||||||||||||| ||||||||||| || | ||||||||| | |||||  ||||||||||||    
T  10569203 ataaaagaaactattaagaaagatctagagattaataagctggatagaaatatcgtatatgatagaacattat 10569131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 15577568 - 15577640
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattat 170  Q
    |||||||||| ||||||||| ||| |||||||||||||||| |||||| || || |||   ||||||||||||    
T  15577568 ataagagaaactattaagaaggatatagagattaatgagttggatagagatatgatatttgatagaacattat 15577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 19908515 - 19908383
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    ||||||| ||| |||  |||||| |||||||||| ||||| |||  |||| |||| ||  ||||||  ||||  ||||||||| || ||||| ||||||     
T  19908515 taagagacattgttagaaaagatttagagattaacgagttggattcaaatatggtttataatagaatcttattgcgtagtttgatccatgtacctgaccc 19908416  T
Q  199 tacttagtgggataatgcttggttgttgttgta 231  Q
     |||||||||||||| ||||||| |||| ||||    
T  19908415 cacttagtgggataaggcttggtcgttgctgta 19908383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 25460226 - 25460182
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacat 167  Q
    |||||||||||||||||||||||||| |||||||  |||||||||    
T  25460226 tagagattaatgagtttgatagaaatatggtatataatagaacat 25460182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 28533678 - 28533750
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| ||||||||  |||| || ||||||| ||||  ||||||||||||||  ||||||||||||||||    
T  28533678 atagaacactatgacgtcatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgta 28533750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 49347464 - 49347392
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  49347464 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 49347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 1210956 - 1211027
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  1210956 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1211027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 7133373 - 7133302
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||| || | || |||| || ||||||||||||  ||||||||||| || ||||||||||||||||    
T  7133373 atagaacattttggcctaatttgatccatgtagctgaccccacttagtgggaaaaggcttggttgttgttgt 7133302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 15086133 - 15086204
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||| || |||||||  |||  |||||||||||||| ||||||||||||||||    
T  15086133 atagaacactatgacgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgt 15086204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 16822150 - 16822020
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| || ||||||||||||||||||||||||| | |||||  || || ||||  || |||||||||| ||   ||||||| ||||||  ||||      
T  16822150 aagagaaactagtaagaaagatgtagagattaatgagctggatagcgatatgatatatgattgaacattatggcg-gctttggtccatgtagtcgacccc 16822052  T
Q  200 acttagtgggataatgctt-ggttgttgttgt 230  Q
    ||||||||||||||  ||| ||||||||||||    
T  16822051 acttagtgggataaaacttgggttgttgttgt 16822020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 17815628 - 17815687
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtata 156  Q
    ||||||||||| |||| |||||||| ||| |||| ||||||| ||||||||| |||||||    
T  17815628 tataagagaaactatttagaaagatctagtgattgatgagttagatagaaatatggtata 17815687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 22090307 - 22090378
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||| || ||||||| ||||  ||| |||||||||| ||||||||||||||||    
T  22090307 atagaacactatgacgtcatttgatccatgtagccgaccccactaagtgggataaggcttggttgttgttgt 22090378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 25979302 - 25979231
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  25979302 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25979231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 29577463 - 29577534
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  29577463 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29577534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 30202201 - 30202130
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  30202201 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30202130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 231
Target Start/End: Complemental strand, 38877469 - 38877342
Alignment:
Q  104 gaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtactt 203  Q
    |||| ||| ||| ||||| || ||||||| ||||| |||||  || | |||||  ||||||||||||| |||  |||| || ||||||| || |  ||||    
T  38877469 gaaagtatcaagtaagatctaaagattaacgagttggatagggatatagtatacgatagaacattatggcgtcatttgatccatgtagccgaacccactt 38877370  T
Q  204 agtgggataatgcttggttgttgttgta 231  Q
    |||||||||| |||||||||| ||||||    
T  38877369 agtgggataaggcttggttgtggttgta 38877342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 39525976 - 39526047
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||| |||||| ||| ||||| || |||||||||||| || |||||||||  | ||||||||||||||||    
T  39525976 atagaatattatggcgtcgtttgatccatgtagctgaccctatttagtgggaccaggcttggttgttgttgt 39526047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 44751695 - 44751766
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  44751695 atagaacactatggcgtcatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgttgt 44751766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 8203268 - 8203226
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||||||||| |||||| |||||| ||||||||||||||||    
T  8203268 ctataagagaaactattaaaaaagatctagagattaatgagtt 8203226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 8676999 - 8676957
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||||||||| |||||| |||||| ||||||||||||||||    
T  8676999 ctataagagaaactattaaaaaagatttagagattaatgagtt 8676957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 19969346 - 19969304
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||||||||| |||||| |||||| ||||||||||||||||    
T  19969346 ctataagagaaactattaacaaagatctagagattaatgagtt 19969304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 22930645 - 22930675
Alignment:
Q  200 acttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||||||||||||||||||||||    
T  22930645 acttagtgggataatgcttggttgttgttgt 22930675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 39516002 - 39515868
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||| |||||| |||||||||| |  |||| ||||||||||| |||  |||| |||  ||   |||||||||||| | | ||||| ||||||||||| |    
T  39516002 ctatacgagaaactattaagaaaaacctagaaattaatgagttggatcaaaatatggattatggtagaacattatggcattgtttgatctatgtagctaa 39515903  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  | |||||| |||||  |||||||||||||||    
T  39515902 ccacaattagtgagataagacttggttgttgttgt 39515868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 40920642 - 40920588
Alignment:
Q  117 aagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    ||||| |||||||||||||||| ||||||||| |||||||  |||||| ||||||    
T  40920642 aagatctagagattaatgagttggatagaaatatggtatatgatagaatattatg 40920588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 43898461 - 43898491
Alignment:
Q  200 acttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||||||||||||||||||||||    
T  43898461 acttagtgggataatgcttggttgttgttgt 43898491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 12231513 - 12231562
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgataga 145  Q
    |||||||||| | ||||||||||||| | |||||||||||||| ||||||    
T  12231513 ctataagagagactattaagaaagatctcgagattaatgagttggataga 12231562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 27847917 - 27847800
Alignment:
Q  113 aagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggata 212  Q
    |||| |||| ||||| |||||||||||| | ||||| |||| ||  || |||||||||| |||| |||  || ||||||| || |  |||||||||||||    
T  27847917 aagatagatttagaggttaatgagtttggttgaaatatggtttatgatggaacattatgccgtaattttatccatgtagccgatctcacttagtgggata 27847818  T
Q  213 atgcttggttgttgttgt 230  Q
    | |||||||  |||||||    
T  27847817 aggcttggtcattgttgt 27847800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 52921318 - 52921363
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  52921318 atgtagccgaccccacttagtgggataaggcttggttgttgttgta 52921363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 696508 - 696552
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  696508 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 696552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 2544804 - 2544876
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||||||||| | || |||| || ||||||| ||||  ||||||||| | || |||||||||||||||||    
T  2544804 atagaacattatggcataatttgatccatgtagccgaccccacttagtggtaaaaggcttggttgttgttgta 2544876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 3777328 - 3777260
Alignment:
Q  162 gaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||| ||||||||  |||| || ||||||| || |  ||||||| |||||||||||||||||||||||    
T  3777328 gaacactatgacgtcatttgatccatgtagccgatcccacttagtaggataatgcttggttgttgttgt 3777260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 230
Target Start/End: Complemental strand, 11941712 - 11941580
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    |||||||||  |||||  |||||| ||||||||| |||||| ||| | | | |||| ||  ||| ||||||||| |||| |||| || ||||||  | ||    
T  11941712 ataagagaagctattagaaaagatttagagattattgagttggatcggagtatggtttatgataaaacattatggcgtattttgatccatgtagtcggcc 11941613  T
Q  198 gtacttagtgggataatgcttggttgttgttgt 230  Q
      |||||||||||||  ||||||||||||||||    
T  11941612 tcacttagtgggatacggcttggttgttgttgt 11941580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 12135861 - 12135905
Alignment:
Q  102 gagaaattattaagaaagatgtagagattaatgagtttgatagaa 146  Q
    |||||| |||||||||| || |||||||||||||||| |||||||    
T  12135861 gagaaactattaagaaaaatctagagattaatgagttggatagaa 12135905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 28694063 - 28694107
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||| |||||||||||||||  |||||||||||||||    
T  28694063 atgtagctaaccctacttagtgggataaaacttggttgttgttgt 28694107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 38758064 - 38758020
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  38758064 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 38758020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 40568481 - 40568409
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||| | |||| |||| |||| || |||||||  |||  |||||||||||||| |||||||||||||||||    
T  40568481 atagaaaactatggcgtaatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgta 40568409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 43481842 - 43481798
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  43481842 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 43481798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 148
Target Start/End: Original strand, 43954364 - 43954396
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaat 148  Q
    |||||| ||||||||||||||||||||||||||    
T  43954364 aaagatctagagattaatgagtttgatagaaat 43954396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 30198400 - 30198266
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||||||||||||||||| | |||||||||||||| ||| | ||| |||| ||  |||||| ||||||  |||||||| ||||||| || ||    
T  30198400 ctataagagaaattattaagaaagatattgagattaatgagttggatcggaatatggtttatgatagaatattatggtgtagtttgatctatgttgccga 30198301  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| ||||||||||||||||    
T  30198300 ccccacttagtgggataaggcttggttgttgttgt 30198266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 35643740 - 35643608
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||| ||  ||||||||   || | || |||| || |||||||  |    
T  35643740 ctataagagaaattattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaaca--ctgccatattttgatccatgtagccta 35643643  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||||||||||||||||||||    
T  35643642 ccccacttagtgggataatgcttggttgttgttgt 35643608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 29520797 - 29520932
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| | ||| ||| ||| |||||||||||||||| |||  |||| |||| ||  ||||||||||||| |||| |||| || |||||||  |    
T  29520797 ctataagagaaactgttaggaacgatttagagattaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccca 29520896  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  | ||||||||||||||||||||||||||||||    
T  29520897 ccccatttagtgggataatgcttggttgttgttgta 29520932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 39967633 - 39967499
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||||| ||| |||||||||||| ||| || || | || ||   |||||||||||| ||||||||| || ||||||| ||    
T  39967633 ctataagagaaactattaagaaagatctagcgattaatgagttggattgagatatagtttatgttagaacattatggcgtagtttgatccatgtagccga 39967534  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
     |  ||||| || ||||||||||||||||||||||    
T  39967533 tcccacttattgtgataatgcttggttgttgttgt 39967499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 490502 - 490617
Alignment:
Q  115 gaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataat 214  Q
    ||||||| |||||||| ||||||| |||  |||| |||| ||  ||||||||||||| |||| |||| || ||||||| ||||  ||||||||||||||     
T  490502 gaaagatttagagattgatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataag 490601  T
Q  215 gcttggttgttgttgt 230  Q
    ||||| ||||||||||    
T  490602 gcttgtttgttgttgt 490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 35914735 - 35914600
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||  |  ||||||||||||| ||   |||| |||| ||  ||||||||||||| |||| |||| || ||||||||||    
T  35914735 ctataagagaaactattaggaaagacttgaagattaatgagttggaccaaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctga 35914636  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  |||||||| |||||  ||||||||||||||||    
T  35914635 ccccacttagtgagataagacttggttgttgttgta 35914600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 45419383 - 45419518
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||| | || |   |||||||||||||  |||| |||| ||  |||||||||||||  ||| |||| || ||||||| ||    
T  45419383 ctataagagaaactattaggaaaggtttaaatcataatgagtttgatccaaatttggtttatgatagaacattatggtgtaatttgatccatgtagccga 45419482  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  |||||||||||||| |||||||||||||||||    
T  45419483 ccccacttagtgggataaggcttggttgttgttgta 45419518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 3638440 - 3638334
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    |||||||||||||||| || |||||| | |||||  |||||||||||||  || ||||| || ||| ||||||||  |||||||||||||| ||||||||    
T  3638440 tagagattaatgagttggacagaaatatagtatatgatagaacattatg--gttgtttgttccatggagctgaccccacttagtgggataaggcttggtt 3638343  T
Q  223 gttgttgta 231  Q
    | |||||||    
T  3638342 gatgttgta 3638334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 4011231 - 4011308
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgac 173  Q
    |||||||||||| ||||||||||||| || ||||||||||||| |||| | |||||| |||  |||||||||||||||    
T  4011231 ctataagagaaactattaagaaagatctaaagattaatgagttggataaagatgtggaatacgatagaacattatgac 4011308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 16035861 - 16035744
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| | |||||||| || ||||||||| | |||| ||| ||||| |||| ||   ||||||||||||||||| |||| |  ||||||||||    
T  16035861 ctataagagaaactgttaagaaatatctagagattacttagttggatcgaaatatggtttatggtagaacattatgacgtaatttgattcatgtagctga 16035762  T
Q  196 ccgtacttagtgggataa 213  Q
    ||  ||||||||||||||    
T  16035761 ccccacttagtgggataa 16035744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 230
Target Start/End: Complemental strand, 30783174 - 30783042
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    |||||||||| |||| |||||||| |||||||||||||||| ||| |||||  ||| ||  ||| |||||||||| |||||||| || ||||||| ||||    
T  30783174 ataagagaaactatttagaaagatctagagattaatgagttggatcgaaatacggtttataataaaacattatgaggtagtttgatccatgtagccgacc 30783075  T
Q  198 gtacttagtgggataatgcttggttgttgttgt 230  Q
      |  |||||||||||  ||||  |||||||||    
T  30783074 ccatctagtgggataaaacttgactgttgttgt 30783042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 1928658 - 1928587
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  1928658 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1928587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 30559841 - 30559980
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtc-----tatgta 190  Q
    |||||||||||| ||| | ||||||| |||||||||||||||| |||  | || |||| ||  |||||||||||||||||| |||| ||      |||||    
T  30559841 ctataagagaaactatcaggaaagatttagagattaatgagttggatccatatatggtttatgatagaacattatgacgtaatttgatccatgtaatgta 30559940  T
Q  191 gctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    || ||||  | |||||||||||| ||||||||||||||||    
T  30559941 gccgaccccagttagtgggataaggcttggttgttgttgt 30559980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 23492182 - 23492316
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||| ||||||| || | |||||||||||| |||||||||||| ||||||||| || ||||  |||||||| ||||  ||  |||  || ||||||| ||    
T  23492182 ctattagagaaactactcagaaagatgtagcgattaatgagttggatagaaatatgatatatgatagaacactatggtgtcatttaatccatgtagccga 23492281  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||| ||||| ||||| ||||||||||    
T  23492282 ccccacttagtgagataaggcttgtttgttgttgt 23492316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 227
Target Start/End: Complemental strand, 24399922 - 24399793
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgac 196  Q
    ||||||||||| ||||||||| ||| | |||||||||||||| ||| ||||| |||| ||  |||||| ||||||| ||  |||| ||||||||||  ||    
T  24399922 tataagagaaactattaagaaggatctcgagattaatgagttggattgaaatatggtttatgatagaatattatgatgtcatttgttctatgtagccaac 24399823  T
Q  197 cgtacttagtgggataatgcttggttgttgt 227  Q
    |  ||||||||| |||| | |||||||||||    
T  24399822 cacacttagtggaataa-gtttggttgttgt 24399793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 10108963 - 10109036
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    |||||||||| || |||||||||| |||||||||| |||||||||||| || || ||||  |||||||||||||    
T  10108963 ataagagaaactaataagaaagatctagagattaacgagtttgatagagatatgttatatgatagaacattatg 10109036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 226
Target Start/End: Complemental strand, 45041444 - 45041320
Alignment:
Q  101 agagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgta 200  Q
    ||||||| ||||| ||||||| ||||| |||||||||| |||  || | |||| ||  ||||  ||||||| |||| |||| || ||||||||||||  |    
T  45041444 agagaaactattaggaaagatttagaggttaatgagttggatccaa-tatggtttatgatagcgcattatggcgtaatttgatccatgtagctgacccca 45041346  T
Q  201 cttagtgggataatgcttggttgttg 226  Q
    ||||||||||||| ||||||||||||    
T  45041345 cttagtgggataaggcttggttgttg 45041320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 79175 - 79227
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    |||||||||||| ||||||||||||| |||||||||||||| | |||||||||    
T  79175 ctataagagaaactattaagaaagatctagagattaatgagctggatagaaat 79227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 1313775 - 1313843
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    ||||||||||||| |||| |||  || |||||| |||||  ||||||||||||||||||||||||||||    
T  1313775 atagaacattatggcgtaattttatccatgtagttgaccccacttagtgggataatgcttggttgttgt 1313843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 16921457 - 16921501
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||    
T  16921457 atgtagccgaccgtacttagtgggataaagcttggttgttgttgt 16921501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 10080041 - 10079943
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||| ||| | ||||||||||| |||||||||||||||| ||||||||| || |||   |||||||   ||||||| ||||| || ||||||||||    
T  10080041 ctataagaaaaactgttaagaaagatctagagattaatgagttggatagaaatatgatatttgatagaac---atgacgtcgtttgttcgatgtagctga 10079945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 21425213 - 21425328
Alignment:
Q  115 gaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataat 214  Q
    ||||||| |||||||||||||||| ||| ||||| || | ||  ||||| ||||||| | || |||| || ||||||| |||| |||||||||| |||      
T  21425213 gaaagatatagagattaatgagttggatcgaaatatgatttatgatagaccattatggcataatttgatccatgtagcagaccctacttagtggaatatg 21425312  T
Q  215 gcttggttgttgttgt 230  Q
    |||||||| |||||||    
T  21425313 gcttggttattgttgt 21425328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 30689950 - 30690009
Alignment:
Q  163 aacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    |||||||||||||| |||| || ||||||| ||||  |||||||||||||||||||||||    
T  30689950 aacattatgacgtaatttgatccatgtagccgaccccacttagtgggataatgcttggtt 30690009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 35362778 - 35362651
Alignment:
Q  102 gagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtac 201  Q
    |||||| ||||| ||||||| | || ||||||||||| ||  ||||| |||| ||  ||||||||||||| |||| |||| || ||| |||  |||  ||    
T  35362778 gagaaactattaggaaagatttggaaattaatgagttggactgaaatatggtgtatgatagaacattatggcgtaatttgatccatgcagccaaccccac 35362679  T
Q  202 ttagtgggataatgcttggttgttgttg 229  Q
    ||||||||| || |||||||||||||||    
T  35362678 ttagtgggaaaaggcttggttgttgttg 35362651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 36545360 - 36545431
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  36545360 atagaacactatgacgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 36545431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 15215526 - 15215412
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatg 215  Q
    |||||| ||||||| ||||||||||||  |||| |||| |   |||||||| ||||||||  | || || ||||||| ||||  ||||||| |||||| |    
T  15215526 aaagatttagagatcaatgagtttgatccaaatatggtttttaatagaacactatgacgtcatatgatccatgtagccgaccccacttagtaggataagg 15215427  T
Q  216 cttggttgttgttgt 230  Q
    |||||||||||||||    
T  15215426 cttggttgttgttgt 15215412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 23023373 - 23023467
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgta 190  Q
    |||||||||||| || |||||||||| || ||||||||||||| ||||| ||  || ||||  |||||| |||||||||| ||||| || |||||    
T  23023373 ctataagagaaactactaagaaagatctacagattaatgagttggataggaacatgatatatgatagaatattatgacgtcgtttgatccatgta 23023467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 24558633 - 24558671
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgag 136  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  24558633 ataagagaaattattaagaaagatttagagattaatgag 24558671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 11733899 - 11733980
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttg 181  Q
    |||||||| ||| |||||| || |||||||||||||||| ||||||||| ||||||   ||||| ||||||| ||| |||||    
T  11733899 aagagaaactataaagaaaaatctagagattaatgagttagatagaaatatggtatgtgatagagcattatggcgtcgtttg 11733980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 35323970 - 35324055
Alignment:
Q  145 aaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||| |||||||  ||| || ||||||||||| |||| || | ||||| ||||  |||||||||||||| ||||||||||||||||    
T  35323970 aaatatggtatataataaaatattatgacgtaatttgatccacgtagccgaccccacttagtgggataaggcttggttgttgttgt 35324055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 16917339 - 16917403
Alignment:
Q  104 gaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacatt 168  Q
    |||| ||| ||| ||||| |||||||||||||||| ||||||||| |||||||  ||||||||||    
T  16917339 gaaactatcaaggaagatttagagattaatgagttggatagaaatatggtatatgatagaacatt 16917403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 24739981 - 24739933
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgataga 145  Q
    ||||||||||| |||| |||||||||||||||||||| |||| ||||||    
T  24739981 tataagagaaactattgagaaagatgtagagattaatcagttggataga 24739933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 36069751 - 36069883
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgac 196  Q
    |||||| |||| |||||| ||| || |||||||||||||||| | ||||||| |||| ||  ||||||||||| | |||| |||| || || ||||  |     
T  36069751 tataagggaaactattaacaaatatttagagattaatgagttgggtagaaatatggtttatgatagaacattacggcgtaatttgatccatatagccaaa 36069850  T
Q  197 cgtacttagtgggataatgcttggttgttgttg 229  Q
    |  ||||| ||| |||||||||| |||||||||    
T  36069851 cccacttactggaataatgcttgattgttgttg 36069883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 39388935 - 39388983
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    |||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  39388935 aagagaaactattaggaaagatctagagattaatgagttggatagaaat 39388983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 44047576 - 44047532
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||  |||||||||||||| ||||||||||||||||    
T  44047576 atgtagctgaccccacttagtgggataaggcttggttgttgttgt 44047532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 10668568 - 10668497
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||| ||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  10668568 atagaacactatgaggtcatttgatcgatgtagccgacctcacttagtgggataaggcttggttgttgttgt 10668497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 11523794 - 11523723
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  11523794 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11523723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 14742153 - 14742082
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  14742153 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14742082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 230
Target Start/End: Complemental strand, 25473502 - 25473403
Alignment:
Q  131 aatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||  |||| |||| ||  |||||||| |||  |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  25473502 aatgagtttgatccaaatttggtgtatgatagaacactatagcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 25473403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 27556373 - 27556302
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| | || |||| || ||||||| ||||  |||||||||| ||| ||||||||||||||||    
T  27556373 atagaacattatggcataatttgatccatgtagccgaccccacttagtgggttaaagcttggttgttgttgt 27556302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 32276896 - 32276967
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||| |||| || ||||||  || |  |||||||||||||| ||||||||||||||||    
T  32276896 atagaacattatggcgtaatttgatccatgtagacgaacccacttagtgggataaagcttggttgttgttgt 32276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 42469798 - 42469727
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||||||||  ||||| |||||||| ||||||||||||||||    
T  42469798 atagaacactatggcgtcatttgatccatgtagctgaccccacttattgggataaggcttggttgttgttgt 42469727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 42584570 - 42584640
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||||||||| |||| ||| |||||| ||||  ||||||||||||||  |||| ||||||||||    
T  42584570 atagaacattatgacgtaatttgatct-tgtagccgaccccacttagtgggataagacttgattgttgttgt 42584640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 1064952 - 1065002
Alignment:
Q  180 tggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||| ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  1064952 tggtccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1065002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 4955344 - 4955474
Alignment:
Q  101 agagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgta 200  Q
    ||||||| |||||| |||||  |||| |||||||||||||||  |||| || | ||  ||| ||||||| |||||| |||| | |||||||  || |  |    
T  4955344 agagaaactattaaaaaagacttagaaattaatgagtttgatttaaatatgatttataataaaacattacgacgtaatttgatttatgtagtcgatctca 4955443  T
Q  201 cttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| ||||| | |||||||||||||||    
T  4955444 cttagtgagataaggtttggttgttgttgta 4955474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 12611666 - 12611780
Alignment:
Q  117 aagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgc 216  Q
    ||||| ||||||| |||||||| | ||||||| || ||||   |||||| |||||  || ||||| || ||||||| || |  | |||||||||||| ||    
T  12611666 aagatctagagataaatgagttgggtagaaatatgatatatgttagaactttatggtgtcgtttgatccatgtagccgatcccaattagtgggataaggc 12611765  T
Q  217 ttggttgttgttgta 231  Q
    |||||||||||||||    
T  12611766 ttggttgttgttgta 12611780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 14459043 - 14459177
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||| | |||||||||||||| ||   |||| |||| ||  || ||||||||||  ||| |||| || ||||||| ||    
T  14459043 ctataagagaaactattaggaaagatttggagattaatgagttagaccaaaatatggtttatgatggaacattatggtgtaatttgatccatgtagccga 14459142  T
Q  196 -ccgtacttagtgggataatgcttggttgttgttg 229  Q
     ||  |||| |||||||||  ||||||||||||||    
T  14459143 cccccactttgtgggataagccttggttgttgttg 14459177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 32931109 - 32931238
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||| ||||||| ||||| ||||||| | || ||||||||||| ||  ||||| |||| ||  ||||||||||||| | || |||| || ||||||| ||    
T  32931109 ctatcagagaaactattaggaaagattttgaaattaatgagttggac-gaaatatggtgtatgatagaacattatggcataatttgatccatgtagccga 32931207  T
Q  196 ccgtacttagtgggataatgcttggttgttg 226  Q
    ||  ||||||||||| ||  |||||||||||    
T  32931208 ccccacttagtgggaaaagccttggttgttg 32931238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 16705898 - 16705955
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtata 156  Q
    ||||||||| |||||||||| |  |||||||||||||||| ||| ||||| |||||||    
T  16705898 taagagaaactattaagaaaaagctagagattaatgagttggatcgaaatatggtata 16705955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 16715422 - 16715551
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgac 196  Q
    |||||||||||  || ||||| |||  ||||||||||| |||||||||  || || ||||  ||||||||||||| ||  ||||| || | ||||| |||    
T  16715422 tataagagaaaccatcaagaaggatcaagagattaatgggtttgatagggatatgatatatgatagaacattatggcggtgtttgatccacgtagccgac 16715521  T
Q  197 cgtacttagtgggataatgcttggttgttg 226  Q
    | | ||||||||||| | ||||| ||||||    
T  16715522 cctgcttagtgggattaggcttgattgttg 16715551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 18741843 - 18741908
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgt 224  Q
    |||||||||||||||||| |||| || | ||||| ||||  ||||||||||||||  |||||||||    
T  18741843 atagaacattatgacgtaatttgatccaagtagccgaccccacttagtgggataagacttggttgt 18741908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 18746807 - 18746872
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgt 224  Q
    |||||||||||||||||| |||| || | ||||| ||||  ||||||||||||||  |||||||||    
T  18746807 atagaacattatgacgtaatttgatccaagtagccgaccccacttagtgggataagacttggttgt 18746872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 41031489 - 41031420
Alignment:
Q  161 agaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||  || |||| || || |||| ||||  |||||||||||||| ||||||||||||||||    
T  41031489 agaacattatgagataatttgatccatatagccgaccccacttagtgggataaggcttggttgttgttgt 41031420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 41031595 - 41031526
Alignment:
Q  161 agaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||  || |||| || || |||| ||||  |||||||||||||| ||||||||||||||||    
T  41031595 agaacattatgagataatttgatccatatagccgaccccacttagtgggataaggcttggttgttgttgt 41031526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 43904799 - 43904698
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||||||||||   ||| || |||| |||||||||||||||| |||  |||| |||| ||  ||||||||||||| |||| |||| || ||||||| ||    
T  43904799 ctataagagaaacggttatgagagatttagagattaatgagttggatctaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccga 43904700  T
Q  196 cc 197  Q
    ||    
T  43904699 cc 43904698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 44529463 - 44529508
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  44529463 atgtagccgaccccacttagtgggataaggcttggttgttgttgta 44529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 1549507 - 1549391
Alignment:
Q  114 agaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataa 213  Q
    |||||||| |||||||||||||||| ||||| ||  || ||||   ||||||||||  || | ||||| || ||||| | ||||  |||||||||||||     
T  1549507 agaaagatctagagattaatgagttggatagcaacatgatatatggtagaacattactacatcgtttgatccatgtaacggaccccacttagtgggatat 1549408  T
Q  214 tgcttggttgttgttgt 230  Q
     ||||||| ||||||||    
T  1549407 ggcttggtggttgttgt 1549391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 9999460 - 9999515
Alignment:
Q  101 agagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataa 157  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||||| || |||||    
T  9999460 agaggaattattaagaaagatc-agagattgatgagtttgatagaaatatgttataa 9999515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 30748641 - 30748745
Alignment:
Q  126 agattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgtt 225  Q
    ||||||||||||| ||||||||| || ||||  || ||||||||||| ||  |||| || ||||||||||||  ||| || ||| |||  ||| ||||||    
T  30748641 agattaatgagttggatagaaatatgatatataattgaacattatgatgtcatttgatccatgtagctgaccccactaagcgggttaagacttagttgtt 30748740  T
Q  226 gttgt 230  Q
    |||||    
T  30748741 gttgt 30748745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 33666691 - 33666655
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgataga 145  Q
    ||||||||||||  |||||||||||||||||||||||    
T  33666691 tattaagaaagacctagagattaatgagtttgataga 33666655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 35320444 - 35320400
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||  |||||||||||||| |||||||| |||||||    
T  35320444 atgtagctgaccccacttagtgggataaagcttggttattgttgt 35320400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 38392027 - 38391947
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgta 176  Q
    ||||| ||||||  |||||||||||| || ||||||||||||  ||| ||||| |||||||  |||||| |||||| ||||    
T  38392027 ctatatgagaaaccattaagaaagatctacagattaatgagtgggatcgaaatatggtatatgatagaatattatggcgta 38391947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 34639 - 34505
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||||||||||  |||||||||||| || ||||||||||||| ||| ||||| |||| ||  ||||||||||||| |||| |||| || ||||||||||    
T  34639 ctataagagaaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctga 34540  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  ||||||||||||||  |||||||||||||||    
T  34539 ccccacttagtgggataagacttggttgttgttgt 34505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 1748079 - 1747946
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||| ||||||| || ||||||| || |||||||||||||||| ||||||||| | |||||  ||||||||||| ||||| ||||| || |||||| |||    
T  1748079 ctattagagaaactactaagaaaaatttagagattaatgagttggatagaaatatagtatatgatagaacattacgacgtcgtttgatccatgtagttga 1747980  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    || ||||| ||| |||||  |||||||| ||||||    
T  1747979 cc-tacttggtgcgataagacttggttgctgttgt 1747946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 234
Target Start/End: Original strand, 31818679 - 31818817
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||| | | |||||||||||||| |||  || | |||| ||  ||||||||||||| |||| |||| || ||||||| ||    
T  31818679 ctataagagaaactattaggaaaggtttggagattaatgagttggatcaaagtatggtttatgatagaacattatgtcgtaatttgatccatgtagccga 31818778  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgtacat 234  Q
    ||  |||||| |||| || ||||||||||||||||||||    
T  31818779 ccccacttagcgggaaaaagcttggttgttgttgtacat 31818817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 6293519 - 6293399
Alignment:
Q  103 agaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtact 202  Q
    ||||| ||||| |||| || |||| ||||||||||| ||||||||| |||||||  ||||| ||||||| |   |||||||| ||||||| ||||  |||    
T  6293519 agaaactattaggaaatatctagatattaatgagttagatagaaatatggtatatgatagagcattatggcaacgtttggtcaatgtagccgaccccact 6293420  T
Q  203 tagtgggataatgcttggttg 223  Q
    ||||||||||| |||||||||    
T  6293419 tagtgggataaggcttggttg 6293399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 231
Target Start/End: Original strand, 5095986 - 5096117
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| | ||| ||||||| ||| | |||||||||| |||  |||| |||| ||  ||||||||||||| |||| |||| |||||||||| || |      
T  5095986 aagagaaactcttaggaaagatttagtggttaatgagttggatcaaaatatggtttatgatagaacattatggcgtaatttgatctatgtagccgatccc 5096085  T
Q  200 acttagtgggataatgcttggttgttgttgta 231  Q
    |||||||||||||| | |||||||||||||||    
T  5096086 acttagtgggataaggtttggttgttgttgta 5096117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 9593841 - 9593710
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgac 196  Q
    ||||||||||| ||||| ||||||  |||||||||||||||| |||   ||| |||| ||  |||||||||||||  ||| |||| || || ||||||||    
T  9593841 tataagagaaactattaggaaagacttagagattaatgagttggatcccaatatggtttatgatagaacattatg--gtaatttgatccatatagctgac 9593744  T
Q  197 cgtacttagtgggataatgcttggttgttgttgt 230  Q
    |  ||||||||| |||| ||||||||||||||||    
T  9593743 cacacttagtggcataaggcttggttgttgttgt 9593710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 33997678 - 33997545
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||    |||||||||||||||| ||||||||| ||||| |  || |||||||||| |||  |||| ||||||   |  |    
T  33997678 ctataagagaaactattaagaaaagcctagagattaatgagttggatagaaatatggtacatgattgaacattatggcgtcatttgatctatgcgaccaa 33997579  T
Q  196 ccgtacttagtgggataatgcttggttgttgttg 229  Q
    ||  |||||||||||||||||||| |||||||||    
T  33997578 ccacacttagtgggataatgcttgattgttgttg 33997545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 8364704 - 8364838
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||||| |||| |||||| |||| ||  ||||  |||| ||  ||||||||||||| |||| |||| || ||||||| ||    
T  8364704 ctataagagaaactattaagaaagatttagaaattaataagttggactgaaacatggtttatgatagaacattatggcgtaatttgatccatgtagccga 8364803  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||   |||||||||| || ||||  ||||||||||    
T  8364804 ccccgcttagtgggaaaaggctttattgttgttgt 8364838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 12890786 - 12890857
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  12890786 atagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12890857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 5897625 - 5897739
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatg 215  Q
    |||||| |||| ||||||| ||| |||  |||| |||||||   ||||| ||||||||||| |||| || ||||||| || |  |||||||||||||| |    
T  5897625 aaagatttagatattaatgtgttggatcaaaatatggtatatggtagaatattatgacgtaatttgatccatgtagcggatcccacttagtgggataagg 5897724  T
Q  216 cttggttgttgttgt 230  Q
    |||| ||||||||||    
T  5897725 cttgattgttgttgt 5897739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 35199755 - 35199682
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    ||||| ||||| ||||| ||||||| |||||||||||||||| ||||||||| | |||||  |||||||||||||    
T  35199755 tataaaagaaactattaggaaagatctagagattaatgagttagatagaaatat-gtatatgatagaacattatg 35199682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 7513061 - 7513008
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggata 212  Q
    |||||||||||||||||| |||| ||||||||| |||||  |||||||||||||    
T  7513061 atagaacattatgacgtaatttgatctatgtagttgaccccacttagtgggata 7513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 30789145 - 30789076
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgtt 228  Q
    |||||||| ||||||||  |||| || ||||||| || | ||||||||||||||| ||||||||||||||    
T  30789145 atagaacactatgacgtcatttgatccatgtagccgatcctacttagtgggataaggcttggttgttgtt 30789076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 579636 - 579700
Alignment:
Q  166 attatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||| |||| |||| |||||||||| || |  |||||||||||||| ||||||||||||||||    
T  579636 attatggcgtaatttgatctatgtagccgatcccacttagtgggataaagcttggttgttgttgt 579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 21089608 - 21089676
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    ||||||||||||| | | ||||| || ||||||||| ||  |||||||||||||| |||||||||||||    
T  21089608 atagaacattatggcattgtttgatccatgtagctgcccccacttagtgggataaggcttggttgttgt 21089676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 24665963 - 24666055
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagc 192  Q
    |||||||| |||||||||| || ||||| | |||||||| ||| ||||| |||| ||  ||||||||||||||| || |||| ||| ||||||    
T  24665963 aagagaaactattaagaaatatttagaggtcaatgagttggatcgaaatatggtttatgatagaacattatgacttaatttgatctgtgtagc 24666055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 30031467 - 30031535
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    |||||||| |||| |||| |||| || ||||||| ||||  |||||||||||||| |||||||||||||    
T  30031467 atagaacactatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgt 30031535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 30642979 - 30643051
Alignment:
Q  158 tatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||||  ||| |||| |||||||||| ||||  |||||| ||| ||| ||||||||||||||||    
T  30642979 tatagaacattatggagtaatttgatctatgtagccgaccccacttagcgggttaaggcttggttgttgttgt 30643051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 4245943 - 4245872
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||||| | ||||| || | ||||| ||||  |||||||||||||| ||||||||||| ||||    
T  4245943 atagaacattatgacatcgtttgatccaagtagccgaccccacttagtgggataaggcttggttgtttttgt 4245872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 31819042 - 31819113
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  ||||||||||||||||||||||||| |||||    
T  31819042 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataatgcttggttgtggttgt 31819113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 608372 - 608442
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttg 229  Q
    |||||| | ||||||||  |||| || ||||||| |||| |||||||||||||||  ||||||||||||||    
T  608372 atagaatactatgacgtcatttgatccatgtagccgaccctacttagtgggataagacttggttgttgttg 608442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 586011 - 586132
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| |||  ||| ||| | ||||||||||| | |||||  |||||||||||||||||  |||| |  ||| ||| ||||  ||||| |||    
T  586011 tattaagaaagatctagcaattgatgtgcttgatagaaatattgtatatgatagaacattatgacgtcatttgattcatggagccgacctcacttaatgg 586110  T
Q  209 gataatgcttggttgttgttgt 230  Q
    |||||  |||| ||||||||||    
T  586111 gataaaccttgattgttgttgt 586132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 1681654 - 1681613
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||    
T  1681654 tataagagaaactattaagaaggatctagagattaatgagtt 1681613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 9707008 - 9707053
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  9707008 atgtagccgaccccacttagtgggataaggcttggttgttgttgta 9707053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 12119714 - 12119641
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgt-acttagtgggataatgcttggttgttgttgta 231  Q
    |||||||||||||||||  |||| || ||||||| ||||   |||||||||||||| ||||||||||| |||||    
T  12119714 atagaacattatgacgtcatttgatccatgtagccgacccccacttagtgggataaggcttggttgttattgta 12119641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 34934874 - 34934829
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  34934874 atgtagccgaccccacttagtgggataaggcttggttgttgttgta 34934829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 1615294 - 1615222
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| ||||||||  |||| || ||||||| ||||  | ||||||||||||  ||||||||||||||||    
T  1615294 atagaacactatgacgtcatttgatccatgtagccgacctcatttagtgggataagacttggttgttgttgta 1615222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 5053675 - 5053807
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgac 196  Q
    ||||||||||| | |||  ||||||  ||||||||||||||| | ||| ||| |||||||  ||| | |||| |  ||| ||||| || ||||||| |||    
T  5053675 tataagagaaactgttaccaaagattcagagattaatgagttggttaggaatatggtatatgataaagcattgttgcgtcgtttgatcaatgtagccgac 5053774  T
Q  197 cgtacttagtgggataatgcttggttgttgttg 229  Q
    |  | ||||| |||||| |||||||||||||||    
T  5053775 cccatttagtaggataaggcttggttgttgttg 5053807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 28085614 - 28085658
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  28085614 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 28085658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 29196058 - 29196006
Alignment:
Q  177 gtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttg 229  Q
    ||||| |||||||| |||||   ||||||| ||||||||||||||||||||||    
T  29196058 gtttgatctatgtaactgactccacttagtaggataatgcttggttgttgttg 29196006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 33730203 - 33730247
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  33730203 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 33730247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 37042798 - 37042667
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| |||||||||  |||||   |||||||||||||  || ||||| || ||||||| ||    
T  37042798 ctataagagaaactattaagaaagatctagagattattgagttggatagaaatacggtatttgatagaacattatggtgtcgtttgatccatgtagccga 37042699  T
Q  196 ccgtacttagtgggataatgcttggttgttgt 227  Q
    ||  |||||||||||||| |||||||||||||    
T  37042698 cccgacttagtgggataaggcttggttgttgt 37042667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 22420835 - 22420717
Alignment:
Q  112 taagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggat 211  Q
    |||||||||| |||||||||||||||| |||||| || ||||| |  ||||| ||||||| ||| ||||| ||||||||| |||||  ||||||||||||    
T  22420835 taagaaagatctagagattaatgagttggatagagatatggtaaatgatagagcattatggcgttgtttgatctatgtagttgaccccacttagtgggat 22420736  T
Q  212 aatgcttggttgttgttgt 230  Q
    || ||||||||||||||||    
T  22420735 aaggcttggttgttgttgt 22420717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 55007907 - 55008028
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| |||||||||||||||| ||  ||||| |||| ||  ||||| |||||||||||| |||| || ||||||| ||||  |||||||||    
T  55007907 tattaagaaagatttagagattaatgagttggaccgaaatatggtttatgatagatcattatgacgtaatttgatccatgtagccgaccccacttagtgg 55008006  T
Q  209 gataatgcttggttgttgttgt 230  Q
    ||||| ||||||||||||||||    
T  55008007 gataaggcttggttgttgttgt 55008028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 25574985 - 25575106
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| |||||||||||||||| ||| ||||| |||| ||  |||||||||| ||  ||| |||| || ||||||| ||||  | |||||||    
T  25574985 tattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagcagaccccatttagtgg 25575084  T
Q  209 gataatgcttggttgttgttgt 230  Q
    ||||| ||||||||||||||||    
T  25575085 gataaggcttggttgttgttgt 25575106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 26024984 - 26024851
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||| |||||| ||||||||||||| |||||||||||||||| ||| || |  |||| ||  |||||||||||||  ||| |||  || ||||||| ||    
T  26024984 ctatatgagaaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgatagaacattatggtgtaattttatccatgtagccga 26024885  T
Q  196 ccgtacttagtgggataatgcttggttgttgttg 229  Q
    ||  |||||||||||||| |||||||||||||||    
T  26024884 cctcacttagtgggataaggcttggttgttgttg 26024851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 31339699 - 31339803
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    |||||||||||||||| ||| ||||| ||||| |  ||||||||||||||||| |||||||| ||||| | ||||  |||||||||||||| ||||| ||    
T  31339699 tagagattaatgagttggatcgaaatatggtacatgatagaacattatgacgtcgtttggtccatgtatccgaccccacttagtgggataaggcttgctt 31339798  T
Q  223 gttgt 227  Q
    |||||    
T  31339799 gttgt 31339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 6843763 - 6843838
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    |||||||||| | ||||||||||||| |||||||||||||||||||||||||| || ||||  |||||||||||||    
T  6843763 ctataagagagactattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatg 6843838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 31403168 - 31403033
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||| ||| ||||| ||||||| ||||||||||| |||| |||||||||||||||||  ||||| |||||||  || | ||| || ||||||  ||    
T  31403168 ctataagaaaaactattatgaaagatctagagattaattagttggatagaaatgtggtatatgatagagcattatggtgttgcttgatccatgtagacga 31403069  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  ||||||| ||||||  ||||||||||||||||    
T  31403068 ccccacttagtaggataaaacttggttgttgttgta 31403033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 37488239 - 37488373
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataat-atagaacattatgacgtagtttggtctatgtagctg 194  Q
    |||||||||||| ||||||||||||| |||| |||||| ||||||||  |||| |||| |||| ||||| ||||||| |||| |||| || |||||||      
T  37488239 ctataagagaaactattaagaaagatctagaaattaataagtttgatcaaaatatggt-taatgatagagcattatggcgtaatttgatccatgtagcca 37488337  T
Q  195 accgtacttagtgggataatgcttggttgttgttgt 230  Q
     ||  |||||||||||||| ||||||||||||||||    
T  37488338 gccccacttagtgggataaggcttggttgttgttgt 37488373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 45204973 - 45204840
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||| ||||| ||||| |||| |||  |||| |||| ||  ||||||||||| | |||| |||| ||||||||||  |    
T  45204973 ctataagagaaactattaggaaagatttagagtttaataagttggatccaaatatggtttatgatagaacattagg-cgtaatttgatctatgtagccca 45204875  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| ||||||||||||||||    
T  45204874 cccaacttagtgggataaggcttggttgttgttgt 45204840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 51421878 - 51422012
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||| ||||| ||||||| || |||  |||  |||| ||  |||||||||||||||||| |||| || |||||||  |    
T  51421878 ctataagagaaactattaggaaagatttagaggttaatgaattggatccaaaaatggtttatgatagaacattatgacgtaatttgatccatgtagccaa 51421977  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
     |  |||||||||||||| ||||||||||||||||    
T  51421978 tctcacttagtgggataaagcttggttgttgttgt 51422012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 41192226 - 41192343
Alignment:
Q  113 aagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggata 212  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||   |||||||||||| | | ||| | || ||||||| ||||  || |||| |||||    
T  41192226 aagaaagatctagagattaatgagttggatagaaatatggtatatggtagaacattatggcttcgttcgatccatgtagccgacccgacatagttggata 41192325  T
Q  213 atgcttggttgttgttgt 230  Q
    | ||||||||||||||||    
T  41192326 aggcttggttgttgttgt 41192343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 47372799 - 47372895
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagc 192  Q
    |||||||||||| || ||| ||||||  ||||||||||||||| ||||||||| ||||||| ||||||||||||||  || ||||| || |||||||    
T  47372799 ctataagagaaactactaataaagatccagagattaatgagttggatagaaatatggtatattatagaacattatggagtcgtttgatccatgtagc 47372895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 42293399 - 42293265
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||||| |||| ||||||||||| |||||| || |||||||  ||||| ||||| ||  |  |||  |||||||||| |     
T  42293399 ctataagagaaactattaagaaagatctagaaattaatgagttagatagacatatggtatatgatagagcattacgatatcatttaatctatgtagccgg 42293300  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  ||||||||| |||| || |||||||||||||    
T  42293299 ccccacttagtggaataaggcctggttgttgttgt 42293265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 44719497 - 44719361
Alignment:
Q  97 tataagagaaattattaagaaagatgtaga---gattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagct 193  Q
    ||||| ||||| ||||||||||||| || |    ||||||||||| |||||||||  ||||||  ||||| |||||||  || ||||| || |||||||     
T  44719497 tataaaagaaactattaagaaagatctaaatattattaatgagttagatagaaatacggtatataatagagcattatggtgtcgtttgatccatgtagcc 44719398  T
Q  194 gaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||| |||||||||||||||  |||||||||||||||    
T  44719397 gaccctacttagtgggataagacttggttgttgttgt 44719361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 29209279 - 29209174
Alignment:
Q  126 agattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgtt 225  Q
    ||||||||||||| ||||||||| |||||||  ||||| ||||||| ||| ||||| || ||||||| ||||  ||||| ||||||||  ||||||||||    
T  29209279 agattaatgagttggatagaaatatggtatatgatagagcattatggcgttgtttgatcaatgtagccgaccccacttaatgggataagacttggttgtt 29209180  T
Q  226 gttgta 231  Q
     |||||    
T  29209179 tttgta 29209174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 51438623 - 51438727
Alignment:
Q  126 agattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgtt 225  Q
    ||||||||||||| ||  ||||| |||| ||  ||| ||||||||| |||| |||| || ||||||||||||  |||| ||||||||| |||||||||||    
T  51438623 agattaatgagttggaatgaaatatggtttataatataacattatggcgtaatttgatccatgtagctgacccaactttgtgggataaggcttggttgtt 51438722  T
Q  226 gttgt 230  Q
    |||||    
T  51438723 gttgt 51438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 26037637 - 26037506
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    |||||||||| ||||| ||||||| ||||| | |||||||| |||  |||| |||| ||  |||||||| |||| |||| || | || ||||||| ||||    
T  26037637 ataagagaaactattaggaaagatttagaggtgaatgagttggatccaaatatggtttatgatagaacactatggcgtaattggatccatgtagccgacc 26037538  T
Q  198 gtacttagtgggataatgcttggttgttgttg 229  Q
      |||||||||||||| | |||||||||||||    
T  26037537 ccacttagtgggataaggtttggttgttgttg 26037506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 42639150 - 42639079
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    |||||||| ||||||||||||| ||| |||||||||||| ||||||||| ||||||   |||||||||||||    
T  42639150 aagagaaactattaagaaagatctagcgattaatgagttggatagaaatatggtatttgatagaacattatg 42639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 45209276 - 45209205
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||| |||||| ||||||||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  45209276 atagaatattatggcgtagtttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 45209205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 48622677 - 48622542
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||| |||||||| ||||  |||||| ||||| | ||||||||||||  |||| |||| ||  |||||||| |||| |||  |||  || ||||||| ||    
T  48622677 ctattagagaaatcattagaaaagatttagaggtcaatgagtttgatccaaatttggtgtatgatagaacactatggcgtcatttaatccatgtagccga 48622578  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  |||||||||||||| |||||||||||||||||    
T  48622577 ccccacttagtgggataaggcttggttgttgttgta 48622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 31961400 - 31961266
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||| ||||||| |||||||| || | | |  ||||     |||||||| |||||||| ||||| |  ||||||| ||    
T  31961400 ctataagagaaactattaggaaagatctagagataaatgagttggagaaagacatggttgttgatagaacactatgacgtcgtttgattcatgtagccga 31961301  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| ||||||||||||||||    
T  31961300 cctcacttagtgggataaggcttggttgttgttgt 31961266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 35690419 - 35690553
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| |||| || ||||| ||||||||||||||  ||    ||| ||  ||||||||||||| |||| |||| || ||||||| ||    
T  35690419 ctataagagaaactattacgaaaaatttagaggttaatgagtttgatccaatcagggtttatgatagaacattatggcgtaatttgatccatgtagccga 35690518  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  ||||||||||||||  ||||||| |||||||    
T  35690519 ccccacttagtgggataagacttggtttttgttgt 35690553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 47372913 - 47372987
Alignment:
Q  157 atatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||||||||||||| | || || || ||||||| |||| ||||||||||||||| ||||| |||||||||||    
T  47372913 atatagaacattatgacatcgtctgatccatgtagccgaccctacttagtgggataaggcttgattgttgttgta 47372987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 7544654 - 7544605
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  7544654 taagagaaactattaagaaagatctagagattaatgagtttgatcgaaat 7544605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 27338515 - 27338387
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    |||||||||||||||||||| || |||| |||||| |||| || || ||| |   |||  ||||||||||||||||||||| | || ||||||| ||||     
T  27338515 taagagaaattattaagaaaaatttagacattaattagttggagagtaatat---atatgatagaacattatgacgtagttggatccatgtagccgaccc 27338419  T
Q  199 tacttagtgggataatgcttggttgttgttgt 230  Q
    | ||||||||||| |  ||| |||||||||||    
T  27338418 tccttagtgggatgagactttgttgttgttgt 27338387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 230
Target Start/End: Original strand, 2589222 - 2589354
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    |||||||||| ||| ||||  ||| |||||||||||||||| |||  |||| |||| |   |||||||| |||| ||| ||||| |  |||||||| |||    
T  2589222 ataagagaaactatcaagatggatctagagattaatgagttggatgaaaatatggtttttgatagaacactatggcgtcgtttgattcatgtagctaacc 2589321  T
Q  198 gtacttagtgggataatgcttggttgttgttgt 230  Q
      | |||||||||||| ||||||||||||||||    
T  2589322 ccagttagtgggataaggcttggttgttgttgt 2589354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 23906368 - 23906296
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| |||| |||  |||| || ||||||||||||  |||||||||||||| |||||||||||||||||    
T  23906368 atagaacactatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgttgta 23906296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 50662537 - 50662593
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggt 153  Q
    |||||||||||||||| | |||||| |||||||||||||||||||| ||||| ||||    
T  50662537 tataagagaaattatttaaaaagatctagagattaatgagtttgatcgaaatatggt 50662593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 195
Target Start/End: Complemental strand, 7682044 - 7681945
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||| |||||| || || ||||||||||||| ||||||||| |||||||  |||| |||||||  | | ||||| || ||||||||||    
T  7682044 ctataagagaaactatcaagaaaaatctatagattaatgagttagatagaaatatggtatatgataggacattattgcatcgtttgatccatgtagctga 7681945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 29399015 - 29399086
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||| |||| |  ||||||||||||  ||||||||||| || ||||||||||||||||    
T  29399015 atagaacattatggcgtaatttgattcatgtagctgaccccacttagtgggaaaaggcttggttgttgttgt 29399086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 55388332 - 55388213
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| | |||||||||||||| ||| ||||| || | ||  |||||||||| ||  ||| |||| || |||| |  ||||  |||||||||    
T  55388332 tattaagaaagatttggagattaatgagttagatcgaaatatgatttatgatagaacattgtggtgtaatttgatccatgttgtcgaccccacttagtgg 55388233  T
Q  209 gataatgcttggttgttgtt 228  Q
    ||||| ||||||||||||||    
T  55388232 gataaggcttggttgttgtt 55388213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 13805399 - 13805265
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||| ||||||||| | |||| |||| |||| ||  ||||| |||| ||  |||||||||||||   || |||| || |||||||  |    
T  13805399 ctataagagaaactatgaagaaagattttgagagtaataagttggacggaaatatggtttatgatagaacattatgggataatttgatccatgtagccaa 13805300  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||  ||||||||||||||||    
T  13805299 ccccacttagtgggatatggcttggttgttgttgt 13805265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 231
Target Start/End: Complemental strand, 28550588 - 28550454
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgac 196  Q
    ||||||||||| ||||| ||||||| ||||| ||||||||||||||  |||| |||| |   ||||||   ||||   || |||| || |||||||||||    
T  28550588 tataagagaaactattaggaaagatttagaggttaatgagtttgatccaaatatggtttttgatagaaagctatgttataatttgatcaatgtagctgac 28550489  T
Q  197 cgtacttagtgggataatgcttggttgttgttgta 231  Q
    |  ||||| |||||||| | |||||||||||||||    
T  28550488 cccacttattgggataaggtttggttgttgttgta 28550454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 31959948 - 31959814
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||| ||||||| |||||  || ||| ||||| | |||||||| |||  |||| |||| ||  |||||||| |||| |||  |||| || ||||||| ||    
T  31959948 ctattagagaaactattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccga 31959849  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| ||||||||||||||||    
T  31959848 ccccacttagtgggataaggcttggttgttgttgt 31959814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 40018323 - 40018189
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||| ||| | ||||||||||| ||||||| |||||||| |||||  || || ||||  ||||||||||| | ||| ||||| || ||||||| ||    
T  40018323 ctataagaaaaactgttaagaaagatctagagatcaatgagttggatagggatatgatatatgatagaacattacggcgtcgtttgatccatgtagccga 40018224  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  ||||||||| ||||  |||| ||| ||||||    
T  40018223 ccccacttagtggaataaaacttgtttgctgttgt 40018189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 50680888 - 50680930
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  50680888 ctataagagaaattatttagaaagatctagagattaatgagtt 50680930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 50967157 - 50967028
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| ||||||||||||  ||||||| |||||||| ||  | | | |||||||  | |||| |||||| |||| |||| || ||||||| ||||      
T  50967157 aagagaaactattaagaaagac-tagagatcaatgagttggaatgcagtatggtatatgaaagaaaattatgtcgtaatttgatccatgtagccgacctc 50967059  T
Q  200 acttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||| |||| ||||||||||||||||    
T  50967058 acttagtggaataaagcttggttgttgttgt 50967028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 54470355 - 54470485
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||  |||||| |||| | |||||||||||||||| ||||||||| |||||||  |  || ||||||  |||  |||| || |||||||  |    
T  54470355 ctataagagaatctattaataaagttctagagattaatgagttggatagaaatatggtatatgactgagcattattgcgtcatttgatccatgtagccaa 54470454  T
Q  196 ccgtacttagtgggataatgcttggttgttg 226  Q
    ||  |||||||||||| | ||||||||||||    
T  54470455 ccccacttagtgggattaggcttggttgttg 54470485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 8599075 - 8598958
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||||| || |  |||||||||| || ||||||  |||||   ||||||||||||| ||| ||||| |  ||||||| ||    
T  8599075 ctataagagaaactattaagaaagatctaaatgttaatgagttagaaagaaataaggtatttgatagaacattatggcgtcgtttgattcatgtagccga 8598976  T
Q  196 ccgtacttagtgggataa 213  Q
    |   ||||||||||||||    
T  8598975 cgccacttagtgggataa 8598958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 15665326 - 15665383
Alignment:
Q  173 cgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||| |||| || ||||||||||||  |||||||||||||| ||||||||||||||||    
T  15665326 cgtaatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgttgt 15665383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 21214720 - 21214619
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||| | || ||| ||||||||| || |||||| || | ||  ||||| ||||||||||| ||||| | ||| |||||||    
T  21214720 ctataagagaaactattaagaaaggtctatagagtaatgagttggagagaaatatgatgtatgatagagcattatgacgttgtttgatttatatagctga 21214621  T
Q  196 cc 197  Q
    ||    
T  21214620 cc 21214619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 38903852 - 38903803
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgataga 145  Q
    |||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  38903852 ctataagagaaactattaagaaagacctaaagattaatgagtttgataga 38903803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 20192244 - 20192311
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    |||||||||||||||||  |||| || | ||||| |||| ||||||||||||||| |||||||||||||    
T  20192244 atagaacattatgacgttatttgatcaa-gtagccgaccctacttagtgggataaagcttggttgttgt 20192311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 5306471 - 5306578
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    |||||||||||||||| |||  |||| |||| ||  | | ||||||||| |||| |||| || || ||||| |||  |||| ||||||||| ||||||||    
T  5306471 tagagattaatgagttggatccaaatatggtttatgacataacattatggcgtaatttgatccatatagctaaccccacttggtgggataaggcttggtt 5306570  T
Q  223 gttgttgt 230  Q
    ||||||||    
T  5306571 gttgttgt 5306578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 6957809 - 6957880
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||| || ||||||| || |  |||||||||||||| ||||||||||||||||    
T  6957809 atagaacactatgacgtcatttgatccatgtagccgatcccacttagtgggataaggcttggttgttgttgt 6957880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 8286650 - 8286721
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||| || ||||||| | ||  |||||||||||||| ||||||||||||||||    
T  8286650 atagaacactatgacgtcatttgatccatgtagccgcccccacttagtgggataaggcttggttgttgttgt 8286721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 12494874 - 12494945
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||  || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  12494874 atagaacactatgacgtcatttaatccatgtagcggaccccacttagtgggataaggcttggttgttgttgt 12494945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 19154934 - 19154863
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||| ||||||||  |||||||||||||| ||||||||||||||||    
T  19154934 atagaacactatggcgttatttgatccatgcagctgaccccacttagtgggataaggcttggttgttgttgt 19154863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 28236393 - 28236464
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||| ||||||  ||| |||| |||||||||| ||||  ||||||||||||||  |||||||||||||||    
T  28236393 atagaatattatggtgtaatttgatctatgtagccgaccccacttagtgggataagacttggttgttgttgt 28236464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 39100607 - 39100536
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||| | |  || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  39100607 atagaacattatggcgtaatataatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 39100536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 40933031 - 40932924
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    |||||||||||||||| |||||  || || ||||  ||||||||||||| ||  ||||| |  ||||||| ||||  |||| ||||||||| ||||| ||    
T  40933031 tagagattaatgagttggatagggatatgatatatgatagaacattatggcggcgtttgatgcatgtagccgaccccacttggtgggataaggcttgatt 40932932  T
Q  223 gttgttgt 230  Q
    ||||||||    
T  40932931 gttgttgt 40932924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 48174160 - 48174093
Alignment:
Q  163 aacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  48174160 aacattatggcgtcatttgatccatgtagcagaccccacttagtgggataaggcttggttgttgttgt 48174093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 49738684 - 49738549
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||| | ||| ||||||||| ||| |||| ||||||||||| |||||   |  | ||||  | ||||||||||| ||  ||||| || ||||||| ||    
T  49738684 ctataataaaaactattaagaaggatctagaaattaatgagttggatagggttaggatatatgacagaacattatggcggtgtttgatccatgtagccga 49738585  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  | |||||||||||| |||||||||||||||||    
T  49738584 ccccatttagtgggataaggcttggttgttgttgta 49738549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 52569586 - 52569515
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  52569586 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52569515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 56375501 - 56375572
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||| || ||||||| ||||  ||||||||||||||  |||||||||||||||    
T  56375501 atagaacactatgacgtcatttgatccatgtagccgacctcacttagtgggataagacttggttgttgttgt 56375572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 1777131 - 1777017
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatg 215  Q
    |||||| ||||| | |||||||| |||  |||| |||| ||  |||||||| |||| |||  |||| || ||||||| ||||  ||||| |||||||| |    
T  1777131 aaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacagtatggcgtcatttgatccatgtagccgaccccacttaatgggataagg 1777032  T
Q  216 cttggttgttgttgt 230  Q
    |||||||||||||||    
T  1777031 cttggttgttgttgt 1777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 3979131 - 3979201
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttg 229  Q
    |||||||||||||||||| |||| || |||||||  ||   || ||||||||||| |||||||||||||||    
T  3979131 atagaacattatgacgtaatttgatccatgtagcctactccacatagtgggataaggcttggttgttgttg 3979201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 4548233 - 4548303
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttg 229  Q
    |||||||| || | |||| |||| || |||||||  |||  ||||||||||||||||||||||||||||||    
T  4548233 atagaacactaaggcgtaatttgatccatgtagccaacccaacttagtgggataatgcttggttgttgttg 4548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 10209184 - 10209226
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||    
T  10209184 ctataagagaaactattaagaaggatctagagattaatgagtt 10209226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 20999148 - 20999282
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||| | ||| ||||||||||||| ||||| ||||||||||  ||| | || ||| |||   |||| ||||||||||| ||||| ||  |||||| ||    
T  20999148 ctataatataaactattaagaaagatctagagtttaatgagttgaataaatatatggcatatggtagagcattatgacgtcgtttgatccttgtagccga 20999247  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  ||| |||||||||| ||||| ||||| ||||    
T  20999248 ccccactcagtgggataaagcttgattgttattgt 20999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 21107140 - 21107238
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctg 194  Q
    |||||||||||| ||||| ||||| | ||| ||||||| |||| |||  |||| |||| ||  ||||||| ||||| | ||||||| ||||||||||||    
T  21107140 ctataagagaaactattaggaaagttttagtgattaattagttggatccaaatatggtttatgatagaactttatggcttagtttgatctatgtagctg 21107238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Complemental strand, 30621330 - 30621260
Alignment:
Q  101 agagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    ||||||| ||||||||||||| |||||||||||| ||| ||  ||||| |||| ||  |||||||||||||    
T  30621330 agagaaactattaagaaagatttagagattaatgtgttggaccgaaatatggtttatgatagaacattatg 30621260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 47147528 - 47147570
Alignment:
Q  103 agaaattattaagaaagatgtagagattaatgagtttgataga 145  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||    
T  47147528 agaaactattaagaaagatctagagattaatgagttggataga 47147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 50869950 - 50869880
Alignment:
Q  160 tagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| |||| ||| ||||| |  ||| ||||||||  |||||||||||||| ||||||||||||||||    
T  50869950 tagaacactatggcgtcgtttgattcatgcagctgaccccacttagtgggataaggcttggttgttgttgt 50869880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 226
Target Start/End: Complemental strand, 51841332 - 51841202
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||| ||| |||| ||| | ||||| |||||  || || ||||  ||| ||||||||| ||  ||||| || || |||||||    
T  51841332 ctataagagaaactattaagaaggatttagaaattcaagagttggatagggatatgatatatgatacaacattatggcggtgtttgatccatatagctga 51841233  T
Q  196 ccgtacttagtgggataatgcttggttgttg 226  Q
    ||   ||||||||||| | ||||||||||||    
T  51841232 ccccgcttagtgggatgaagcttggttgttg 51841202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 6931751 - 6931714
Alignment:
Q  201 cttagtgggataatgcttggttgttgttgtacatatgt 238  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  6931751 cttagtgggataaagcttcgttgttgttgtacatatgt 6931714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 20047583 - 20047632
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgataga 145  Q
    |||||||||||| ||||||  ||||| |||||||||||||||| ||||||    
T  20047583 ctataagagaaactattaaagaagatctagagattaatgagttggataga 20047632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 28348271 - 28348340
Alignment:
Q  162 gaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||||||| ||| ||||  | ||||||| ||||   ||||||||||||| |||||||||||||||||    
T  28348271 gaacattatgatgtactttgaaccatgtagccgaccccgcttagtgggataaggcttggttgttgttgta 28348340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 30634163 - 30634106
Alignment:
Q  173 cgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  30634163 cgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30634106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 33225966 - 33225925
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    ||||||||||| ||||||||||||| |||||||||| |||||    
T  33225966 tataagagaaactattaagaaagatttagagattaacgagtt 33225925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 44384979 - 44385063
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttg 181  Q
    ||||||||||| | |||||||||||| ||||||||||| |||| ||||  ||| |||| ||  |||||||||||||| ||| ||||    
T  44384979 ctataagagaact-attaagaaagatctagagattaataagttggatattaatatggtttatgatagaacattatgatgtaatttg 44385063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 51550320 - 51550251
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgtt 228  Q
    ||||||||||||| |||  |||| | | |||||||||| | |||||||||||||| |||| |||||||||    
T  51550320 atagaacattatgtcgtcatttgatttttgtagctgactgcacttagtgggataaggcttagttgttgtt 51550251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 436467 - 436511
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  436467 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 436511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 934565 - 934517
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatag 144  Q
    |||| ||||||| ||||||||||| | |||||||||||||||| |||||    
T  934565 ctattagagaaactattaagaaagttctagagattaatgagttggatag 934517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 7066543 - 7066499
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||  | |||||||||||| ||||||||||||||||    
T  7066543 atgtagctgaccccatttagtgggataaggcttggttgttgttgt 7066499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 15661939 - 15661875
Alignment:
Q  163 aacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    ||||||||| |||| |||| || ||||||| ||||  |||||||||||||| | |||||||||||    
T  15661939 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggtttggttgttgt 15661875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 21528526 - 21528570
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  21528526 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 21528570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 25967307 - 25967267
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttg 226  Q
    |||||||||||| |||||||||||||||  |||||||||||    
T  25967307 atgtagctgaccctacttagtgggataaatcttggttgttg 25967267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 26025047 - 26025011
Alignment:
Q  102 gagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  26025047 gagaaactattaagaaagatctagagattaatgagtt 26025011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 27450251 - 27450179
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||| |||||||    
T  27450251 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgctgttgta 27450179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 45569142 - 45569094
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgataga 145  Q
    ||||||||||| |||||||||| || ||||||| |||||||| ||||||    
T  45569142 tataagagaaactattaagaaaaatctagagatcaatgagttggataga 45569094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 46153946 - 46153990
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  46153946 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 46153990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 50238659 - 50238615
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  50238659 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 50238745 - 50238701
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  50238745 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 55028984 - 55029044
Alignment:
Q  111 ttaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    ||||||| ||| |||||||||||||| | ||||||||| || ||||  |||||||||||||    
T  55028984 ttaagaatgatctagagattaatgagctagatagaaatatgttatatgatagaacattatg 55029044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 56130408 - 56130452
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  56130408 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 56130452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 230
Target Start/End: Complemental strand, 36101902 - 36101777
Alignment:
Q  105 aaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtactta 204  Q
    ||||||||| ||||||| || ||||||||||||| |||  |||| |||| ||  |||||||||||||||||| |||| || |||||| |||||  |||||    
T  36101902 aaattattatgaaagatttatagattaatgagttggatcaaaatatggtttatgatagaacattatgacgtaatttgatccatgtagttgaccccactta 36101803  T
Q  205 gtgggataatgcttggttgttgttgt 230  Q
    ||||||||| ||||||||||||||||    
T  36101802 gtgggataaggcttggttgttgttgt 36101777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 227
Target Start/End: Complemental strand, 28628067 - 28627936
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| |||  ||||||||| ||  ||||||||||||| |||| |||| || ||||||| ||    
T  28628067 ctataagagaaactattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccga 28627968  T
Q  196 ccgtacttagtgggataatgcttggttgttgt 227  Q
    |   |||||||||||||| |||| ||||||||    
T  28627967 ctccacttagtgggataaggcttagttgttgt 28627936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 12966164 - 12966298
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| |||||||||| || ||||||||||||| || ||||||||| |||||||  ||| | ||||||| | | ||||| |  ||||||| ||    
T  12966164 ctataagagaaactattaagaaatatttagagattaatgatttggatagaaatatggtatatgataaatcattatgccattgtttgattcatgtagccga 12966263  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
     |  |||||||||||||| ||||||||||||||||    
T  12966264 tcccacttagtgggataaggcttggttgttgttgt 12966298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 40139079 - 40138947
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||  |||  |||||| ||||||||||  |||| || ||||||| ||||     
T  40139079 taagagaaactattaagaaagatctagagattaatgcgtttgatagaaatatgacatatgatagaatattatgacgtcatttgatccatgtagcagaccc 40138980  T
Q  199 tacttagtgggataatgcttggttgttgttgta 231  Q
     |||||||| |||||  ||||| |||| |||||    
T  40138979 cacttagtgcgataagacttggctgttattgta 40138947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 40980062 - 40979927
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| |||||  |||||| ||||| | |||||||| |||  |||| |||| ||  |||||||| |||| |||| |||| || ||||||| ||    
T  40980062 ctataagagaaactattagaaaagatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccga 40979963  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  |||||||||||||| |||||||||||||||||    
T  40979962 ccccacttagtgggataaggcttggttgttgttgta 40979927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 45601624 - 45601755
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||||||||||  |||||||||||| |||||||||||||||| |||  |||| || | ||  |||||||| ||||  ||| |||| || ||||||||||    
T  45601624 ctataagagaaaccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaacactatggtgtaatttgatccatgtagctga 45601723  T
Q  196 ccgtacttagtgggataatgcttggttgttgt 227  Q
     |  |||||||||||||| |||||||||||||    
T  45601724 actcacttagtgggataaggcttggttgttgt 45601755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 9210838 - 9210704
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| | ||| |||| || ||||| |||||||||| |||  |||| |||| ||  ||| ||||||||| |||| |||| || ||||||||||    
T  9210838 ctataagagaaacttttaggaaaaatttagaggttaatgagttggatccaaatatggtttatgatacaacattatggcgtaatttgatccatgtagctga 9210739  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| |||| |||||||||||    
T  9210738 ccccacttagtgggataaggcttcgttgttgttgt 9210704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 42177152 - 42177058
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgta 190  Q
    |||||||||||  ||||||||||||| ||||||| ||||||||| ||| |||| |||||||  || |||||||||||||| ||||| ||||||||    
T  42177152 ctataagagaatctattaagaaagatctagagataaatgagtttcataaaaatatggtatatgattgaacattatgacgtcgtttgatctatgta 42177058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 30200083 - 30199967
Alignment:
Q  111 ttaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtggga 210  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||  ||||| ||||||| ||| |  || |||||||||| | ||   ||||||||||    
T  30200083 ttaagaaagatctagagattaatgagtttgatataaatatggtatatgatagaccattatg-cgtcg--tgatctatgtagccggccccgcttagtggga 30199987  T
Q  211 taatgcttggttgttgttgt 230  Q
    ||| ||||||||||||||||    
T  30199986 taaggcttggttgttgttgt 30199967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 22174148 - 22174249
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||| || |||||| ||||||||||||| || ||||||||| ||||||   ||||||||||||| ||| ||||| || ||||||| ||    
T  22174148 ctataagagaaactataaacaaagatctagagattaatgaattagatagaaatatggtatgtgatagaacattatggcgttgtttgatccatgtagccga 22174247  T
Q  196 cc 197  Q
    ||    
T  22174248 cc 22174249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 27893684 - 27893563
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| |||||||||||||| | ||  ||||| || | ||  ||||||||||||| | || |||| |  ||||||| |||| |||||||||     
T  27893684 tattaagaaagatttagagattaatgagctggaccgaaatatgttttatgatagaacattatggcataatttgattcatgtagccgaccctacttagtgc 27893585  T
Q  209 gataatgcttggttgttgttgt 230  Q
    ||||| ||||||||||||||||    
T  27893584 gataaggcttggttgttgttgt 27893563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 38135346 - 38135213
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgac 196  Q
    ||||||||||| |||||| |||||| |||||||||||||||| ||  ||||| |||  ||  |||||| |||||| |||| |||| || || ||||||||    
T  38135346 tataagagaaactattaaaaaagatttagagattaatgagttggaccgaaatatgggttatgatagaatattatggcgtaatttgatccatctagctgac 38135247  T
Q  197 cgtacttagtgggataatgcttggttgttgttgt 230  Q
    |  |||| |||||| || ||||||||||| ||||    
T  38135246 cccacttggtgggacaaggcttggttgttattgt 38135213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 20158742 - 20158670
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| ||| | ||| |||| || |||||||||||| ||||||||||||||| |||||||||||||||||    
T  20158742 atagaacactatcaagtaatttgatccatgtagctgaccctacttagtgggataaggcttggttgttgttgta 20158670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 1011257 - 1011328
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||||  ||| |||| |||||||||| ||||  |||||||||||||| ||||||||||||||||    
T  1011257 atagaacattatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1011328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 24549822 - 24549763
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtat 155  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||| ||||| ||||||    
T  24549822 ctataagagaaactattaagaaagatctagagattaatgagttggattgaaatatggtat 24549763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 28542065 - 28541942
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga-ccgtacttagtg 207  Q
    ||||||||||||| |||||||||||||||| ||| ||| | |||| ||  ||||||||| ||| | ||||||| ||  |||||| || ||  |||||||     
T  28542065 tattaagaaagatttagagattaatgagttggattgaactatggtttatgatagaacatcatggcatagtttgatccgtgtagccgacccccacttagtt 28541966  T
Q  208 ggataatgcttggttgttgttgta 231  Q
    |||||| |||||||||||||||||    
T  28541965 ggataaggcttggttgttgttgta 28541942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 42187590 - 42187723
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacatt-atgacgtagtttggtctatgtagctga 195  Q
    ||||||||||| ||||| |||| || ||||||||||| |||| |||  |||| |||| ||  |||||||||| ||| |||| |||| || ||||||| ||    
T  42187590 tataagagaaactattaggaaatatttagagattaattagttggatccaaat-tggtttatgatagaacatttatggcgtaatttgatccatgtagccga 42187688  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| |||| |||||||||||    
T  42187689 ccccacttagtgggataaggctttgttgttgttgt 42187723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 14057626 - 14057759
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||| ||||| |||||| ||| |||  |||| |||| ||  |||||||||||||  ||| |||| || |||||||  |    
T  14057626 ctataagagaaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattatggggtaatttgatccatgtagccaa 14057725  T
Q  196 ccgtacttagtgggataatgcttggttgttgttg 229  Q
    ||  ||||||| |||||| |||| ||||||||||    
T  14057726 ccccacttagtaggataaggcttagttgttgttg 14057759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 14367654 - 14367787
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||| ||||| |||||| ||| |||  |||| |||| ||  |||||||||||||  ||| |||| || |||||||  |    
T  14367654 ctataagagaaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattatggggtaatttgatccatgtagccaa 14367753  T
Q  196 ccgtacttagtgggataatgcttggttgttgttg 229  Q
    ||  ||||||| |||||| |||| ||||||||||    
T  14367754 ccccacttagtaggataaggcttagttgttgttg 14367787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 29653677 - 29653628
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||||||    
T  29653677 taagagaaactattaagaaagatctagagattaatgagttagatagaaat 29653628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 40008535 - 40008431
Alignment:
Q  126 agattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgtt 225  Q
    ||||||||||||| |||||| |  || ||||  ||||||||||||| ||| ||||| || ||||||||||||  ||||| || |||||  ||||||||||    
T  40008535 agattaatgagttggatagagacatgatatatgatagaacattatgtcgttgtttgatccatgtagctgacctcacttaatgagataagacttggttgtt 40008436  T
Q  226 gttgt 230  Q
    |||||    
T  40008435 gttgt 40008431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 1569164 - 1569259
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtag 191  Q
    ||||||||| || ||||||||||||| |||||||||||||||| |||  |||| |||| ||  ||||||||||| | |||| |||| || ||||||    
T  1569164 ctataagagtaactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgatagaacattacggcgtaatttgatcgatgtag 1569259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 44855241 - 44855174
Alignment:
Q  163 aacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||| |||| |||| ||||||| ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  44855241 aacactatggcgtaatttggtccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 44855174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 47604029 - 47604148
Alignment:
Q  111 ttaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtggga 210  Q
    ||||||||||| |||| |||||||||||||| |||||| |||||||  |||||| | ||||  || ||||| |  |||||| |||||  ||||| |||||    
T  47604029 ttaagaaagatctagatattaatgagtttgagagaaatatggtatataatagaatactatggtgttgtttgatacatgtagttgacctcacttaatggga 47604128  T
Q  211 taatgcttggttgttgttgt 230  Q
    |||  |||||| ||||||||    
T  47604129 taagacttggtggttgttgt 47604148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 2882838 - 2882736
Alignment:
Q  128 attaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    ||||||||||| ||| ||||  |||| ||  ||||||||||||| |||| |||| ||||| |||||||||  |||||||| || || ||||||| |||||    
T  2882838 attaatgagttggatcgaaacatggtttatgatagaacattatggcgtaatttgatctatttagctgacctcacttagtgagaaaaggcttggtggttgt 2882739  T
Q  228 tgt 230  Q
    |||    
T  2882738 tgt 2882736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 27648948 - 27649062
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatg 215  Q
    |||||| ||||| | |||||||| |||  |||| |||| ||  |||||||| | || |||| |||| || ||||||| ||||  |||||||||||||| |    
T  27648948 aaagatttagaggtcaatgagttggatccaaatttggtttatgatagaacactgtggcgtaatttgatccatgtagccgaccccacttagtgggataagg 27649047  T
Q  216 cttggttgttgttgt 230  Q
    |||||||||||||||    
T  27649048 cttggttgttgttgt 27649062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 47852268 - 47852366
Alignment:
Q  129 ttaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    |||||||||| |||  ||||||||| ||  ||||||||||||| |||| |||| || ||||||| ||||  |||||| ||||||| |||||| ||||||    
T  47852268 ttaatgagttggatccaaatgtggtgtatcatagaacattatggcgtaatttgatccatgtagccgaccccacttagggggataaggcttggctgttgt 47852366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 28858193 - 28858245
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||| |||||||||    
T  28858193 ctataagacaaactattaagaaagatctagagattaataagttggatagaaat 28858245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 32631794 - 32631846
Alignment:
Q  178 tttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||| |||||||||| ||||  |||||||||||||| ||||||||||||||||    
T  32631794 tttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 32631846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 34869631 - 34869703
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| |||| |||  |||| || ||||||| |||| || |||||||||||| |||||||||||||||||    
T  34869631 atagaacactatggcgtcatttgatccatgtagccgaccctaattagtgggataaggcttggttgttgttgta 34869703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 36245376 - 36245305
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttg 181  Q
    |||||||||||||||| |||||||  |||| ||||| ||| |||||||  ||||||||||||||||| |||||    
T  36245376 tattaagaaagatgtacagattaactagttagatag-aatatggtatatgatagaacattatgacgtcgtttg 36245305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 39812149 - 39812217
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    |||||||||||||| || ||||| || |||||| || ||  |||||||||||||| |||||||||||||    
T  39812149 atagaacattatgatgtcgtttgatccatgtagttggccccacttagtgggataaggcttggttgttgt 39812217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 44401258 - 44401165
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagc 192  Q
    ||||||||||| ||||||||||||| |||||||||| |||||  ||  |||| || | ||  |||||||||||||||||| |||| || |||||||    
T  44401258 tataagagaaactattaagaaagatttagagattaacgagtt--atcaaaatatgttttatgatagaacattatgacgtaatttgatccatgtagc 44401165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 2885793 - 2885722
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||  ||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  2885793 atagaacactatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 2885722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 9191928 - 9191975
Alignment:
Q  101 agagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    ||||||| ||||||||||||| ||||||||||| | ||||||||||||    
T  9191928 agagaaactattaagaaagatctagagattaataaatttgatagaaat 9191975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 11594171 - 11594242
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  11594171 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 11594242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 12841346 - 12841275
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  12841346 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12841275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 28208399 - 28208328
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  28208399 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28208328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 28708596 - 28708663
Alignment:
Q  163 aacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||| ||||||    
T  28708596 aacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgatgttgt 28708663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 31682673 - 31682602
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  31682673 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31682602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 34341502 - 34341395
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    ||||||| |||||||| ||| ||||| |||| ||  ||||||||||||| |||| ||||  | ||||||| ||||  | ||||||| |||| ||||| ||    
T  34341502 tagagatgaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgaccaatgtagccgaccccatttagtggaataaggcttgttt 34341403  T
Q  223 gttgttgt 230  Q
    ||||||||    
T  34341402 gttgttgt 34341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 39906443 - 39906372
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  39906443 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 39906372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 41461247 - 41461298
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaa 147  Q
    |||||||||||| |||||| |||||| ||| |||||||||||| ||||||||    
T  41461247 ctataagagaaactattaataaagatctagtgattaatgagttggatagaaa 41461298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 43491519 - 43491590
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||| ||| |||  || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  43491519 atagaacactatgatgtaatttcatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43491590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 44951366 - 44951437
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||| |||| || ||||||| |||  |||||||||| |||| | ||||||||||||||    
T  44951366 atagaacactatgacgtaatttgatccatgtagccgacaatacttagtggtataaggtttggttgttgttgt 44951437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 47652758 - 47652829
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| ||||  ||| ||  |||||| ||||  |||||||||||||| ||||||||||||||||    
T  47652758 atagaacattatggcgtaacttgatccctgtagccgaccccacttagtgggataaggcttggttgttgttgt 47652829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 7273320 - 7273382
Alignment:
Q  168 tatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||| |||| || ||||||| ||||  |||||||||||||| ||||| ||||||||||    
T  7273320 tatgacgtaatttgatccatgtagccgaccccacttagtgggataaggcttgattgttgttgt 7273382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 21078085 - 21078199
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatg 215  Q
    |||||| ||||| | |||||||| |||  |||| |||| ||  ||||||||||||| |||  |||| || ||||||| |||   | |||||||||||| |    
T  21078085 aaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacattatggcgtcatttgatccatgtagccgacttcatttagtgggataagg 21078184  T
Q  216 cttggttgttgttgt 230  Q
    |||||||||||||||    
T  21078185 cttggttgttgttgt 21078199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 29650552 - 29650666
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatg 215  Q
    |||||| ||||| | ||||||||||||  |||| |||| |   |||||||| || | |||  |||| || ||||||| ||||  |||||||||||||| |    
T  29650552 aaagatttagaggtcaatgagtttgatccaaatatggtttttgatagaacactaaggcgtcatttgatccatgtagccgaccccacttagtgggataagg 29650651  T
Q  216 cttggttgttgttgt 230  Q
    |||||||||||||||    
T  29650652 cttggttgttgttgt 29650666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 30144929 - 30144971
Alignment:
Q  102 gagaaattattaagaaagatgtagagattaatgagtttgatag 144  Q
    |||||| ||||||||||||| |||||||||||||||| |||||    
T  30144929 gagaaactattaagaaagatctagagattaatgagttggatag 30144971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 30664716 - 30664758
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||    
T  30664716 ctataaaagaaactattaagaaagatctagagattaatgagtt 30664758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 31840442 - 31840512
Alignment:
Q  160 tagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| |||| ||| ||||| |  |||||||  ||| ||||||||||||||| ||||||||||||||||    
T  31840442 tagaacactatggcgtcgtttgattcatgtagcctaccctacttagtgggataaggcttggttgttgttgt 31840512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 24777172 - 24777241
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgtt 228  Q
    |||||||| ||||||||  |||| |  ||||||| || | ||||||||||||||| ||||||||||||||    
T  24777172 atagaacactatgacgtcatttgattcatgtagccgatcctacttagtgggataaagcttggttgttgtt 24777241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 31681091 - 31681022
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgtt 228  Q
    |||||| | ||||||||| |||| || ||||||| ||||  ||||||||||| || ||||||||||||||    
T  31681091 atagaatactatgacgtaatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgtt 31681022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 33650911 - 33650870
Alignment:
Q  189 tagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||  |||||||||||||| ||||||||||||||||    
T  33650911 tagctgaccccacttagtgggataaggcttggttgttgttgt 33650870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 47413756 - 47413715
Alignment:
Q  189 tagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||  |||||||||||||| ||||||||||||||||    
T  47413756 tagctgaccccacttagtgggataaggcttggttgttgttgt 47413715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 6375079 - 6375147
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| |||||||||||||    
T  6375079 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgt 6375147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 14593990 - 14594034
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  14593990 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 14594034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 16013513 - 16013557
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  16013513 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 16013557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 21244327 - 21244283
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  21244327 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 21244283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 30425174 - 30425134
Alignment:
Q  187 tgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    |||||| |||| ||||||||||||||| |||||||||||||    
T  30425174 tgtagccgaccctacttagtgggataaagcttggttgttgt 30425134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 30814229 - 30814125
Alignment:
Q  126 agattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgtt 225  Q
    |||||||| |||| ||| ||||| || | ||  |||||||||||| ||||| |||| || ||||||| ||||  |||||||||||  | ||||||| |||    
T  30814229 agattaattagttggatcgaaatatgttttatgatagaacattatcacgtaatttgatccatgtagccgaccccacttagtgggaagaggcttggtagtt 30814130  T
Q  226 gttgt 230  Q
    |||||    
T  30814129 gttgt 30814125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 31005443 - 31005487
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  31005443 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 31005487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 31869146 - 31869102
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  31869146 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 31869102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 32368471 - 32368411
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtata 156  Q
    |||||||||||  ||||||| ||||| ||||||||| |||||| ||| ||||| |||||||    
T  32368471 ctataagagaagctattaaggaagatttagagattagtgagttggatcgaaatatggtata 32368411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 36239930 - 36239834
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagc 192  Q
    |||||||||||| ||||| |||| || |||||||||| ||||| |||  |||| || | ||  ||||||||||||| |||| |||| || |||||||    
T  36239930 ctataagagaaactattaggaaaaatttagagattaacgagttggatccaaatatgctttatgatagaacattatggcgtaatttgatccatgtagc 36239834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 37618183 - 37618227
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  37618183 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 37618227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 40149084 - 40149016
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    ||||||||||||| || | |||| |||||||||| ||    |||||||||||||| |||||||||||||    
T  40149084 atagaacattatggcgcaatttgatctatgtagccgaatccacttagtgggataaggcttggttgttgt 40149016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 40415264 - 40415296
Alignment:
Q  199 tacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||||||||||| |||||||||||||||||    
T  40415264 tacttagtgggataaggcttggttgttgttgta 40415296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 230
Target Start/End: Original strand, 7678628 - 7678759
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    |||||||||| |||| |||||||| |||||||||||||||| ||| |||||  ||| ||  ||| |||||||||| |||||||| || ||||||| ||||    
T  7678628 ataagagaaactatttagaaagatctagagattaatgagttggatcgaaatacggtttataata-aacattatgaggtagtttgatccatgtagccgacc 7678726  T
Q  198 gtacttagtgggataatgcttggttgttgttgt 230  Q
      ||||||||||||||  |||||||||||||||    
T  7678727 ccacttagtgggataaaacttggttgttgttgt 7678759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 230
Target Start/End: Complemental strand, 7359392 - 7359261
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    |||||||||| |||| ||||| || ||||||||||| |||| ||| ||||| |||| ||  ||| |||||||||||||| |||| || ||||||||||||    
T  7359392 ataagagaaactatttagaaaaatctagagattaataagttggatcgaaatatggtttacgata-aacattatgacgtaatttgatccatgtagctgacc 7359294  T
Q  198 gtacttagtgggataatgcttggttgttgttgt 230  Q
      ||||||||||| ||  |||||||||||||||    
T  7359293 ccacttagtgggacaagacttggttgttgttgt 7359261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 11675677 - 11675812
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatag-aaatgtggtataatatagaacattatgacgtagtttggtctatgtagctg 194  Q
    |||||||||||| ||||| || |||| |||||||||||||||| |||   |||| |||| ||  ||||||||||||| ||||||||  || ||||||| |    
T  11675677 ctataagagaaactattaggacagatttagagattaatgagttggattttaaatatggtttatgatagaacattatggcgtagtttaatccatgtagccg 11675776  T
Q  195 accgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||  ||||||| |||||| ||||||||||||||||    
T  11675777 accccacttagttggataaggcttggttgttgttgt 11675812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 28186906 - 28186781
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||| || ||       ||||||||||||| ||| ||||| || ||| ||| ||||     
T  28186906 taagagaaactattaagaaagatttagagattaatgagttggatagagatatg-------atagaacattatggcgtcgtttgatccatgcagccgaccc 28186814  T
Q  199 tacttagtgggataatgcttggttgttgttgta 231  Q
    |||| | |||||||| |||||||||||||||||    
T  28186813 tactcaatgggataaggcttggttgttgttgta 28186781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 230
Target Start/End: Original strand, 38684632 - 38684762
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| | ||||||||||| ||||||||||| |||| ||||||||| |||||    ||||||||||||| |||  |||| |  |||||| |||||      
T  38684632 aagagaaacttttaagaaagatctagagattaattagttggatagaaatatggtacttgatagaacattatggcgttatttgattcatgtagttgacccc 38684731  T
Q  200 acttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||| |||| ||||||||||||||||    
T  38684732 acttagtggaataaagcttggttgttgttgt 38684762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 30588595 - 30588712
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| ||| ||||| |||| ||  |||||||||||||||||  | || || ||||||| ||    
T  30588595 ctataagagaaattgttaagaaagatctagagatgaatgagttggatcgaaatatggtttataatagaacattatgacgtgatatgatccatgtagccga 30588694  T
Q  196 ccgtacttagtgggataa 213  Q
    |   ||||||||||||||    
T  30588695 ctccacttagtgggataa 30588712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 218
Target Start/End: Original strand, 9235198 - 9235316
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    ||||||||| ||||||||||||| |||||||||||||| | ||| ||||| |||| ||  ||||||||||||| | || |||| || ||||||| ||||     
T  9235198 taagagaaactattaagaaagatatagagattaatgagctggatcgaaatatggtttatgatagaacattatggcataatttgatccatgtagccgacc- 9235296  T
Q  199 tacttagtgggataatgctt 218  Q
     |||||||||||||| ||||    
T  9235297 cacttagtgggataaggctt 9235316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 43557947 - 43557832
Alignment:
Q  116 aaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatg 215  Q
    |||||| | ||||||| |||||| ||| ||||| |||| ||  ||||||||||||||| ||  ||| |||||||||| ||||  |||||||||||||| |    
T  43557947 aaagatttggagattattgagttggatcgaaatatggtttatgatagaacattatgacttaagttgatctatgtagccgaccccacttagtgggataagg 43557848  T
Q  216 cttggttgttgttgta 231  Q
    | ||||||||||||||    
T  43557847 cctggttgttgttgta 43557832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 4026458 - 4026328
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||||| |||||||||||  ||| ||||||| ||||||||| ||| | |||||  ||| ||||||||||||| ||||| || ||||||| ||        
T  4026458 aagagaaattgttaagaaagatacagaaattaatgggtttgataggaatatagtatacaataaaacattatgacgtcgtttgatccatgtagccgagttc 4026359  T
Q  200 acttagtgggataatgcttggttgttgttgt 230  Q
    |||| ||||||| | ||||||||||||||||    
T  4026358 actttgtgggatcaggcttggttgttgttgt 4026328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 15588522 - 15588399
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| |||||   ||||| ||||||  |||||||| |||| |||  |||||||  | ||||||||||| ||| ||||| |||||||||| ||    
T  15588522 ctataagagaaactattat--aagatttagagagaaatgagttggataaaaacatggtatatgacagaacattatggcgtcgtttgatctatgtagccga 15588425  T
Q  196 ccgtacttagtgggataatgcttggt 221  Q
    || ||||||||||||||| |||||||    
T  15588424 ccctacttagtgggataaggcttggt 15588399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 27998589 - 27998723
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| || |||||||||| || ||||||||||||| ||||| ||  || ||||  |||||| |||||||||| ||||| || ||||| | ||    
T  27998589 ctataagagaaactactaagaaagatctacagattaatgagttagataggaacatgatatatgatagaatattatgacgtcgtttgatccatgtaaccga 27998688  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||  | ||||||| ||||||    
T  27998689 ccccacttagtgggatatggtttggttgatgttgt 27998723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 29922432 - 29922566
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||||||||||| ||||||||||  |||| ||  ||||  |||| ||  ||||||||||||| |||| |||| || |||||||  |    
T  29922432 ctataagagaaactattaagaaagatttagagattaacaagttggactgaaacctggtttacgatagaacattatggcgtaatttgatccatgtagccaa 29922531  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||| |||||||||  |||||||||||||||    
T  29922532 cctcacttggtgggataagccttggttgttgttgt 29922566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 12576990 - 12576861
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||| ||| ||||||||||||| ||||||||||||||||  |||||||| |||||||  ||||| |||||||  ||  |||  |  ||||||| ||||      
T  12576990 aagataaactattaagaaagatctagagattaatgagttgaatagaaatatggtatatgatagaccattatggtgtcattttatacatgtagccgacccc 12576891  T
Q  200 acttagtgggataatgcttggttgttgttg 229  Q
    | |||||||||||| |||||||||||||||    
T  12576890 aattagtgggataaagcttggttgttgttg 12576861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 418149 - 418034
Alignment:
Q  115 gaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataat 214  Q
    ||||||| |||||||||||||||| |||  ||||||||| ||  ||||||||||||| |||| |||| || ||||||| ||||  |||| ||||||||      
T  418149 gaaagatttagagattaatgagttggatccaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttggtgggatatg 418050  T
Q  215 gcttggttgttgttgt 230  Q
    |||||  |||||||||    
T  418049 gcttgaatgttgttgt 418034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 5860045 - 5860116
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||| ||||||| |||| |||| |||||||||| |||| ||||||||||||||| ||||| ||||||||||    
T  5860045 atagaccattatggcgtaatttgatctatgtagccgaccctacttagtgggataaggcttgattgttgttgt 5860116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 14667919 - 14668053
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||  || |||||||||| |||||||||||||||| |||  || | |||| ||  |||||||||||||  ||| |||| || ||||| | ||    
T  14667919 ctataagagaagctactaagaaagatctagagattaatgagttggatccaagtatggtttatgatagaacattatggtgtaatttgatccatgtaaccga 14668018  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  ||||||||||||||  ||||||||| |||||    
T  14668019 ccccacttagtgggataagacttggttgtagttgt 14668053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 2645175 - 2645272
Alignment:
Q  133 tgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||| ||||||||||||||||   ||| ||||||||  | | ||||| || ||||||| | || ||||||||||||||| ||||||||||||||||    
T  2645175 tgagttggatagaaatgtggtatttgataaaacattatagcatcgtttgatccatgtagccggccctacttagtgggataaggcttggttgttgttgt 2645272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 18351009 - 18350902
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    |||||||||||||||| ||||||||| ||||||    |||||||||||||||| ||||| || ||||||| ||||  || | ||||||| |  ||||| |    
T  18351009 tagagattaatgagttggatagaaatatggtatttgttagaacattatgacgtcgtttgatccatgtagccgacctcacatggtgggatgagacttggat 18350910  T
Q  223 gttgttgt 230  Q
    ||||||||    
T  18350909 gttgttgt 18350902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 38132547 - 38132618
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||| |||| || |||| || ||||  |||||||||||||| ||||||||||||||||    
T  38132547 atagaacattatggcgtaatttgatccatgtggccgaccccacttagtgggataaggcttggttgttgttgt 38132618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 42576221 - 42576292
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||| ||| |||| |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  42576221 atagaacataatggcgtaatttgatccatgtagccgacccgacttagtgggataaggcttggttgttgttgt 42576292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 14665937 - 14665994
Alignment:
Q  173 cgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||| |||| |||||||||| ||||  |||||||||||||| ||||||||||||||||    
T  14665937 cgtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14665994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 27386554 - 27386623
Alignment:
Q  162 gaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||||| |||| |||| || ||||||| ||||  |||||||||||||| || ||||||||||||||    
T  27386554 gaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcatggttgttgttgta 27386623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 11069242 - 11069162
Alignment:
Q  150 tggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||  ||||||||||||| |||| |||| || || |||||||||  || ||||||||||  ||||||||||||||||    
T  11069242 tggtatatgatagaacattatggcgtaatttgatccatatagctgaccccacatagtgggatatggcttggttgttgttgt 11069162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 1275475 - 1275546
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||||||||  |||| || ||||||| ||||  |||||||||||||| || | |||||||||||    
T  1275475 atagaacattatgacgtcatttgatccatgtagccgaccccacttagtgggataaggcatagttgttgttgt 1275546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Original strand, 28005696 - 28005731
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatag 144  Q
    ||||||||||||| ||||||||||||||||||||||    
T  28005696 tattaagaaagatctagagattaatgagtttgatag 28005731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 28411887 - 28411958
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| ||| ||||| |  ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  28411887 atagaacactatggcgttgtttgattcatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28411958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 29816593 - 29816664
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  29816593 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29816664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 42272688 - 42272759
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||  |||| || ||||||||||||  |||||||||||||| |||  |||||||||||    
T  42272688 atagaacattatggcgtcatttgatccatgtagctgaccccacttagtgggataaggctaagttgttgttgt 42272759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 43475390 - 43475521
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    ||||||||| |||||||||||||  ||||||||||||||| ||| ||||| || | ||   |||||| |||||  ||| |||| || | |||||  ||      
T  43475390 taagagaaactattaagaaagatccagagattaatgagttggatcgaaatatgatttatggtagaacgttatggtgtaatttgatccacgtagccaactc 43475489  T
Q  199 tacttagtgggataatgcttggttgttgttgt 230  Q
     ||||| |||||||| ||||||||||||||||    
T  43475490 cacttaatgggataaggcttggttgttgttgt 43475521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 3000977 - 3001023
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgtac 232  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||||    
T  3000977 atgtagccgaccccacttagtgggataaggcttggttgttgttgtac 3001023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 20456984 - 20457054
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttg 229  Q
    ||||||||||||| |||  |||| || ||||||| ||||  |||||||||||||| ||||| |||||||||    
T  20456984 atagaacattatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttgattgttgttg 20457054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 33667583 - 33667625
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||    
T  33667583 ctataagagaagttattaagaaggatctagagattaatgagtt 33667625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 3302082 - 3302127
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  3302082 atgtagccgaccccacttagtgggataaggcttggttgttgttgta 3302127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 14749455 - 14749512
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggt 153  Q
    |||||||||||| ||| ||||| ||| |||||||||| ||||| ||||||||| ||||    
T  14749455 ctataagagaaactatcaagaaggatctagagattaacgagttggatagaaatatggt 14749512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 16347424 - 16347379
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| |||| |||||||||||||||  ||||||||||||||||    
T  16347424 atgtagccgaccctacttagtgggataagacttggttgttgttgta 16347379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 408538 - 408494
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  408538 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 408494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 4496622 - 4496666
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  4496622 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 4496666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 12492428 - 12492384
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  12492428 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 12492384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 18698942 - 18698994
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    |||||||||||  ||| ||||||||| ||||||||| |||||| |||||||||    
T  18698942 ctataagagaatgtatcaagaaagatctagagattagtgagttggatagaaat 18698994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 28976903 - 28976859
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  28976903 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 28976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 29601053 - 29601174
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| |||||||||||||||| |||  |||| | || ||  |||||||||||||| ||| |||| || ||||||||||||  |||||||||    
T  29601053 tattaagaaagatttagagattaatgagttggattcaaatatagtttatgatagaacattatgatgtaatttgatccatgtagctgaccccacttagtgg 29601152  T
Q  209 gataatgcttggttgttgttgt 230  Q
    ||||  |||||||| |||||||    
T  29601153 gatacggcttggttcttgttgt 29601174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 45289225 - 45289090
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| |||  |||| |||| ||  ||||||||||||  | || |||| || |||| ||  |    
T  45289225 ctataagagaaactattaggaaagatttagagattaatgagttggatccaaatatggtttatgatagaacattatagcataatttgatccatgtcgccaa 45289126  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  |||||||||||||| |||||||||||||||||    
T  45289125 ccccacttagtgggataaggcttggttgttgttgta 45289090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 197
Target Start/End: Original strand, 55244429 - 55244527
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    ||||||||||| |||||||| || |||||||||||||||| ||||||||| |||||||  |||||||||||||  || ||||| || ||| ||||||||    
T  55244429 taagagaaattcttaagaaaaatctagagattaatgagttggatagaaatatggtatatgatagaacattatggtgtcgtttgatccatgaagctgacc 55244527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 388383 - 388262
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    |||| |||||| | |||||||||||||||  |||||||||  ||||||  ||||| |||||||||||| |||| || |||||||  |||  |||||||||    
T  388383 tatttagaaagttttagagattaatgagtaagatagaaatacggtatatgatagagcattatgacgtaatttgatcaatgtagccaaccccacttagtgg 388284  T
Q  209 gataatgcttggttgttgttgt 230  Q
    ||||| |||||||||| |||||    
T  388283 gataaggcttggttgtcgttgt 388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 227
Target Start/End: Original strand, 49841766 - 49841895
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgacc 197  Q
    |||||||||| |||||| |||||| || ||||||||||||| ||| ||||| |||||||  ||||||||||||| | || |||| || ||||||||||||    
T  49841766 ataagagaaactattaacaaagatctaaagattaatgagttggatcgaaatatggtatatgatagaacattatggcataatttgatccatgtagctgacc 49841865  T
Q  198 gtacttagtgggataatgcttggttgttgt 227  Q
      || ||| | | ||| |||||||||||||    
T  49841866 ccacatagcgaggtaaggcttggttgttgt 49841895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 37534330 - 37534203
Alignment:
Q  102 gagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtac 201  Q
    |||||| ||||||||||||| | ||||||||||| |||||| ||||| | || ||  || ||||||| || |||| |||| ||||||||||||||| | |    
T  37534330 gagaaactattaagaaagatcttgagattaatgaatttgattgaaatatagtttatgattgaacatt-tgtcgtaatttgatctatgtagctgacccttc 37534232  T
Q  202 ttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||   |||||||||||||||    
T  37534231 ttagtgggatatgacttggttgttgttgt 37534203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 49042084 - 49042219
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataat-atagaacattatgacgtagtttggtctatgtagctg 194  Q
    |||||||||||| ||||| ||||||| ||||| |||||||||| |||  |||| |||| | || |||||||| |||| |||| |||| || ||||||| |    
T  49042084 ctataagagaaactattaggaaagatttagaggttaatgagttggatccaaatatggttttatgatagaacactatggcgtaatttgatccatgtagccg 49042183  T
Q  195 accgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||  |||| ||| ||||| ||||||||||||||||    
T  49042184 accccacttggtgagataaggcttggttgttgttgt 49042219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 30797893 - 30797821
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||||||||||||| |||| |||||||| | ||||  ||||||||| |||| |||||||||||||||||    
T  30797893 atagaacattatgacgtaatttgatctatgtaaccgaccccacttagtggaataaggcttggttgttgttgta 30797821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 32170580 - 32170684
Alignment:
Q  123 tagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggtt 222  Q
    ||||||||||| |||| ||||||||| |||| ||  ||| ||||||||||| || |||| || ||||||| ||||  |||||||| ||||| ||||||||    
T  32170580 tagagattaataagttggatagaaatatggtctatgatataacattatgacataatttgatccatgtagccgaccccacttagtgagataaagcttggtt 32170679  T
Q  223 gttgt 227  Q
    |||||    
T  32170680 gttgt 32170684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 19676212 - 19676081
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    ||||||||| ||||| |||| || ||||| |||||||||| |||  |||| || | ||  ||||| ||||||| |||  |||| || ||||||||||||     
T  19676212 taagagaaactattaggaaaaatttagaggttaatgagttggatccaaatatgctgtatgatagagcattatggcgtgatttgatccatgtagctgaccc 19676113  T
Q  199 tacttagtgggataatgcttggttgttgttgt 230  Q
     |||||||||||||| ||||||||||| ||||    
T  19676112 cacttagtgggataaggcttggttgttattgt 19676081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 31337658 - 31337559
Alignment:
Q  132 atgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| ||||||||| ||||||   ||||||||||||||| | ||||| ||||| || | ||||  ||||||||| |||| |||||||||||||||||    
T  31337658 atgagttggatagaaatatggtatttgatagaacattatgacattgtttgatctatttaaccgacctcacttagtggtataaagcttggttgttgttgta 31337559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 42026670 - 42026595
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    |||||||||||| ||||||||  ||| ||| |||||||||||| ||||||||| |||||||  |||||||||||||    
T  42026670 ctataagagaaactattaagattgatatagggattaatgagttagatagaaatatggtatatgatagaacattatg 42026595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 45374548 - 45374477
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||| |||  || ||||||||||||  |||||||||||||| ||||||||||||||||    
T  45374548 atagaacattatggcgtaatttaatccatgtagctgaccccacttagtgggataaggcttggttgttgttgt 45374477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 40106721 - 40106619
Alignment:
Q  129 ttaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgtt 228  Q
    |||||||||| |||  |||| |||| ||  ||||||||||||||| || |||| || ||||||  ||||  |||||||||||||| ||||||||||||||    
T  40106721 ttaatgagttggatccaaatatggtttatgatagaacattatgacataatttgatcaatgtagtggaccccacttagtgggataaggcttggttgttgtt 40106622  T
Q  229 gta 231  Q
    |||    
T  40106621 gta 40106619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 48508383 - 48508517
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||||||||||  ||||  || ||| ||||| | |||||||| |||  |||| |||| ||  |||||||| |||| |||| |||| || ||||||| ||    
T  48508383 ctataagagaaaccattagaaaggatttagaggtcaatgagttggattcaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccga 48508482  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  |||||||||||||| ||||||||||||||||    
T  48508483 ccccacttagtgggataaggcttggttgttgttgt 48508517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 46431813 - 46431684
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| |||||| |||||| |||||||||||||||| |||||| || |  ||||  || |||||||  | ||| ||||| || |||| ||  |    
T  46431813 ctataagagaaactattaaaaaagatctagagattaatgagttggatagagatattatatatgatggaacattgaggcgtcgtttgatccatgtcgccaa 46431714  T
Q  196 ccgtacttagtgggataatgcttggttgtt 225  Q
    ||  |||||||||||||| |||||||||||    
T  46431713 ccccacttagtgggataaggcttggttgtt 46431684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 37083360 - 37083292
Alignment:
Q  162 gaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||| |||| |||||||  |||||| ||||  |||||||||||||| ||||||||||||||||    
T  37083360 gaacattatggcgtaatttggtccttgtagccgaccccacttagtgggataaggcttggttgttgttgt 37083292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 48734218 - 48734146
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||||||||| ||||  ||| || ||||||||||||  |||||||||||||| ||||| |||||||||||    
T  48734218 atagaacattatggcgtaagttgatccatgtagctgaccccacttagtgggataaggcttgattgttgttgta 48734146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 49503632 - 49503568
Alignment:
Q  166 attatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||| |||| |||| || ||||||| |||| ||||||||||||||| ||||||||||||||||    
T  49503632 attatggcgtaatttgatccatgtagccgaccctacttagtgggataaggcttggttgttgttgt 49503568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 22283 - 22354
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| |||||||||| ||||  |||||||||||||| ||||||||||||||||    
T  22283 atagaacactatggcgtcatttgatctatgtagccgaccccacttagtgggataaagcttggttgttgttgt 22354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 231
Target Start/End: Original strand, 15296059 - 15296190
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| ||||| ||||||| ||||| ||||||| || |||  |||| || | |   |||||||||||||  ||| |||| || |||| || ||||      
T  15296059 aagagaaactattaggaaagatttagaggttaatgaattggatccaaatatgatttcggatagaacattatggtgtaatttgatccatgtggccgacccc 15296158  T
Q  200 acttagtgggataatgcttggttgttgttgta 231  Q
    |||||||||||||| |||||||||||||||||    
T  15296159 acttagtgggataaggcttggttgttgttgta 15296190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 25191588 - 25191659
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || |||||||||| |  |||||||||||||||||||||||||||||||    
T  25191588 atagaacactatggcgtcatttgatccatgtagctgatcccacttagtgggataatgcttggttgttgttgt 25191659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 39600815 - 39600740
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    |||||||||||| ||||||||||||| ||||| |||||||||| |||  |||| |||| ||  |||||||||||||    
T  39600815 ctataagagaaactattaagaaagatttagaggttaatgagttggatccaaatctggtttacgatagaacattatg 39600740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 50960768 - 50960641
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    ||||||||| ||||| ||||| | |||||||||||||||| |||  |||| |||| ||  ||||| |||||||  ||| |||| || || ||||  |||     
T  50960768 taagagaaactattaggaaaggtttagagattaatgagttggatccaaatatggtgtatcatagaccattatggtgtaatttgatccatttagccaaccc 50960669  T
Q  199 tacttagtgggataatgcttggttgttg 226  Q
     |||||||||||||| ||||||||||||    
T  50960668 cacttagtgggataaggcttggttgttg 50960641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 52139011 - 52139082
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  52139011 atagaacactatgacgttatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 52139082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 53262352 - 53262423
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| |||||||||| ||||  |||||||||||||| ||||||||||||||||    
T  53262352 atagaacactatggcgtcatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 53262423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 54128530 - 54128661
Alignment:
Q  99 taagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccg 198  Q
    ||||||||| ||| | ||||||| ||||| | |||||||| ||   |||| |||| ||  ||||||||||||| | || |||| || ||||||  ||||     
T  54128530 taagagaaactataaggaaagatttagaggtcaatgagttggacccaaatatggtttatgatagaacattatggcataatttgatccatgtaggcgaccc 54128629  T
Q  199 tacttagtgggataatgcttggttgttgttgt 230  Q
     |||||||||||||| ||||||||||||||||    
T  54128630 cacttagtgggataaggcttggttgttgttgt 54128661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 54365109 - 54364975
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||||||||||| ||||| ||||||  | |||||||||| ||| ||   |||| |||| ||  |||||||| ||||||||| |||| || ||||||| ||    
T  54365109 ctataagagaaactattaggaaagacttggagattaatgtgttagaccaaaatatggtttatgatagaacactatgacgtaatttgatccatgtagccga 54365010  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||  ||| |||||||||| |||||| ||||||||||    
T  54365009 ccacact-agtgggataaggcttggctgttgttgta 54364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 7278669 - 7278747
Alignment:
Q  153 tataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||| ||||||||||||| ||||  |||| || ||||||| ||||  |||||||||||||| |||| ||||||||||||    
T  7278669 tatattatagaacattataacgtcatttgatccatgtagccgaccccacttagtgggataaagcttagttgttgttgta 7278747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 11284157 - 11284271
Alignment:
Q  117 aagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgc 216  Q
    |||||||||||||||||||||| |||| |||| |||||||  || |||||||||  | | ||||| || |||||||  |||   ||||||| ||||| ||    
T  11284157 aagatgtagagattaatgagttggatataaatatggtatatgattgaacattattgcatcgtttgatccatgtagccaaccccgcttagtgagataaggc 11284256  T
Q  217 ttggttgttgttgta 231  Q
    ||| |||||||||||    
T  11284257 ttgcttgttgttgta 11284271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 36304127 - 36304249
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgg 208  Q
    ||||||||||||| |||||||||||||||| |||  |||| |||| ||  |||| |||||||| |||| |||| || ||||||| ||||  ||| | ||     
T  36304127 tattaagaaagatctagagattaatgagttggatcaaaatatggtttatgataggacattatggcgtaatttgatccatgtagccgaccccactcaatgt 36304226  T
Q  209 gataatgcttggttgttgttgta 231  Q
    || || ||| |||||||||||||    
T  36304227 gacaaggctcggttgttgttgta 36304249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 36820111 - 36820069
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  36820111 ctataagagaaactattaagaaagatctagagattaatgagtt 36820069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 2340851 - 2340810
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagt 137  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  2340851 ctataagagaaactattaagaaagatctagagattaatgagt 2340810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 40116461 - 40116348
Alignment:
Q  107 attattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagt 206  Q
    ||||||| || |||| |||||||||||||||| ||  ||||| |||| ||  ||||||||||||| |||| |||| || | ||||| ||||   ||||||    
T  40116461 attattaggatagatttagagattaatgagttggaccgaaatatggtttatgatagaacattatggcgtaatttgatccacgtagccgacctcgcttagt 40116362  T
Q  207 gggataatgcttgg 220  Q
    ||||||| ||||||    
T  40116361 gggataaggcttgg 40116348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 48712195 - 48712074
Alignment:
Q  110 attaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtggg 209  Q
    |||| ||||||| |||| ||| ||||||| |||  |||| |||| ||  ||| ||||||||||| |  |||  || |||||| ||| |  ||||||||||    
T  48712195 attaggaaagatttagatattgatgagttggattcaaatatggtttatgatataacattatgacattatttcatccatgtagttgatcccacttagtggg 48712096  T
Q  210 ataatgcttggttgttgttgta 231  Q
    ||||||||||||||||||||||    
T  48712095 ataatgcttggttgttgttgta 48712074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 24778680 - 24778608
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||||||||  ||| |||| || ||||||| ||||  |||||||||||||| |||||| ||||||||||    
T  24778680 atagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggctgttgttgta 24778608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 5169043 - 5169114
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  5169043 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 5169114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 12096776 - 12096705
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  12096776 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12096705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 35420480 - 35420550
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||| ||||||| ||||||| ||||  | |||||||||||| ||||||||||| ||||    
T  35420480 atagaacattatggcgtaatttggtccatgtagc-gaccccatttagtgggataaggcttggttgttattgt 35420550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 39208819 - 39208890
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||||||||||||| |||| || ||||||  ||||  | |||||||||||  ||||||||||||||||    
T  39208819 atagaacattatgacgtaatttgatccatgtagaggaccccagttagtgggatatggcttggttgttgttgt 39208890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 45486920 - 45486849
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| | || |||| || ||||||| | ||  |||||||||||||| ||||||||||||||||    
T  45486920 atagaacattatggcataatttgatccatgtagccggccccacttagtgggataaagcttggttgttgttgt 45486849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 46140573 - 46140692
Alignment:
Q  114 agaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataa 213  Q
    ||||| || |||||||||||||||||||||||||| | |  ||  |||||||||||||  || ||||| || ||||||  ||||  |||| ||| |||||    
T  46140573 agaaaaatctagagattaatgagtttgatagaaatatagcttacgatagaacattatggagttgtttgatccatgtagtcgaccccactttgtgagataa 46140672  T
Q  214 tgcttggttgttgttgtaca 233  Q
     | ||||||||||| |||||    
T  46140673 ggtttggttgttgtcgtaca 46140692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 46148239 - 46148310
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||||||| |||| |||| || ||||||| ||||  ||||||||||  || ||||||||||||||||    
T  46148239 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggtcaaggcttggttgttgttgt 46148310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 227
Target Start/End: Complemental strand, 46367521 - 46367390
Alignment:
Q  97 tataagagaaattattaagaaaga-tgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    ||||||||||| |||||| ||| | | ||||||| |||||||| ||||   || || ||||  ||||||||||||||||| ||||| || |||||||  |    
T  46367521 tataagagaaactattaaaaaaaaatctagagatgaatgagttggataaggatatgatatatgatagaacattatgacgtcgtttgatccatgtagccta 46367422  T
Q  196 ccgtacttagtgggataatgcttggttgttgt 227  Q
    ||  ||||| | |||||| |||||||||||||    
T  46367421 ccccacttaattggataaagcttggttgttgt 46367390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 53519791 - 53519862
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||| || ||||||| ||||  |||||||| ||||| ||||||||||||||||    
T  53519791 atagaacactatgacgtcatttgatccatgtagccgaccccacttagtgagataaggcttggttgttgttgt 53519862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 17120614 - 17120664
Alignment:
Q  98 ataagagaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    |||||| || |||||||||||||| | |||||||||||||||| |||||||    
T  17120614 ataagaaaatttattaagaaagatcttgagattaatgagtttgttagaaat 17120664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 19162721 - 19162679
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||    
T  19162721 ctataagagaaactattaggaaagatttagagattaatgagtt 19162679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 21200696 - 21200779
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttg 181  Q
    |||| ||| ||| |||| |||||||| |||| ||||||||||| ||||||||| ||||||  |||||| ||||||| ||| |||||    
T  21200696 ctattagacaaactatttagaaagatctagatattaatgagttggatagaaatatggtat--tatagagcattatggcgtcgtttg 21200779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 33700332 - 33700390
Alignment:
Q  97 tataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtat 155  Q
    ||||||||||  |||||||||| || |||||||||||||||| ||||||| | ||||||    
T  33700332 tataagagaagctattaagaaatatctagagattaatgagttagatagaattatggtat 33700390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 41087892 - 41087934
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  41087892 ctataaaagaaattattaagaaggatttagagattaatgagtt 41087934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 49933494 - 49933440
Alignment:
Q  176 agtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||||| ||||||| ||||  |||||||||||||| ||||| ||||||||||    
T  49933494 agtttggtccatgtagccgacctcacttagtgggataaagcttgattgttgttgt 49933440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 26490467 - 26490548
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttg 181  Q
    |||||||| |||||  |||||| |||||| |||||||||||||  ||||||| | | |||||||| |||||| |||| ||||    
T  26490467 aagagaaactattagaaaagatttagagactaatgagtttgatccaaatgtgatttcatatagaatattatggcgtaatttg 26490548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 29475841 - 29475886
Alignment:
Q  103 agaaattattaagaaagatgtagagattaatgagtttgatagaaat 148  Q
    ||||| ||||||||||||| |||||||||||||||| ||| |||||    
T  29475841 agaaactattaagaaagatctagagattaatgagttggattgaaat 29475886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 31566205 - 31566160
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||    
T  31566205 atgtagccgaccccacttagtgggataaggcttggttgttgttgta 31566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 41529975 - 41530040
Alignment:
Q  162 gaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgt 227  Q
    ||||| |||| |||| |||| || ||||||| ||||  |||||||||||||| |||||||||||||    
T  41529975 gaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgt 41530040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 52927917 - 52927852
Alignment:
Q  161 agaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttg 226  Q
    ||||||||||| | || |||| || ||||||| ||||  |||||||||||||| ||||||||||||    
T  52927917 agaacattatggcataatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 52927852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 311353 - 311309
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  311353 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 311309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 38850332 - 38850404
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| ||||||||| |||| || ||||||| ||||  ||||||| ||||||  ||| ||||||||||||    
T  38850332 atagaacactatgacgtaatttgatccatgtagccgaccccacttagtaggataaaacttagttgttgttgta 38850404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 39512781 - 39512825
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  39512781 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 39512825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 40116602 - 40116530
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacatt 168  Q
    |||||||||||| ||||| || |||| |||||||||||||||| ||  ||||| |||| ||  ||||||||||    
T  40116602 ctataagagaaactattaggatagatttagagattaatgagttggaccgaaatatggtttatgatagaacatt 40116530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 40991609 - 40991713
Alignment:
Q  126 agattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgtt 225  Q
    ||||||||||||| ||   |||| |||| ||  |||||||||||||  ||| |||| || ||||||||||||  |||||||| |||||  ||||| ||||    
T  40991609 agattaatgagttggaccaaaatatggtttatgatagaacattatggtgtaatttgatccatgtagctgaccccacttagtgagataagacttggctgtt 40991708  T
Q  226 gttgt 230  Q
    |||||    
T  40991709 gttgt 40991713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 41971376 - 41971308
Alignment:
Q  124 agagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagc 192  Q
    |||||||||||||||  | |||||| || ||||  ||||||||||||||||| ||||| || |||||||    
T  41971376 agagattaatgagttgtacagaaatatgatatatgatagaacattatgacgttgtttgatccatgtagc 41971308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 48532196 - 48532240
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  48532196 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 48532240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 50237755 - 50237695
Alignment:
Q  109 tattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacatta 169  Q
    |||||||||||||  |||||||| |||||| ||||||||| | |||||  |||||||||||    
T  50237755 tattaagaaagattcagagattattgagttggatagaaatattgtatatgatagaacatta 50237695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 2435 - 2360
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatg 171  Q
    |||||||||| | ||||||||||||| |||||||||||||||||||||||||| || ||||  |||||||||||||    
T  2435 ctataagagagactattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatg 2360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 1082 - 948
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctga 195  Q
    |||| |||||||  ||||| |||||| ||||| | |||||||| |||  |||| |||| ||  |||||||| |||| |||  |||| || ||||||||||    
T  1082 ctattagagaaaccattaaaaaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagctga 983  T
Q  196 ccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||  | |||||||||||| ||||||||||||||||    
T  982 ccccatttagtgggataaggcttggttgttgttgt 948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1259 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1259
Description:

Target: scaffold1259; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 1602 - 1522
Alignment:
Q  150 tggtataatatagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||| | |||||||||||||||||| |||| || ||||||||||||  ||||| |  ||||| ||||||||||||||||    
T  1602 tggtatgagatagaacattatgacgtaatttgatcaatgtagctgaccccacttattaagataaagcttggttgttgttgt 1522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 178554 - 178512
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagtt 138  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  178554 ctataagagaaactattaagaaagatatagagattaatgagtt 178512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 31706 - 31750
Alignment:
Q  186 atgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  31706 atgtagccgaccccacttagtgggataaggcttggttgttgttgt 31750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 66694 - 66771
Alignment:
Q  105 aaattattaagaaagatgtagagattaatgagtttgata-gaaatgtggtataatatagaacattatgacgtagtttg 181  Q
    ||||||||||||||||| |||||||||||||||| |||| ||||| |||  ||  ||||||||||||| |||| ||||    
T  66694 aaattattaagaaagatctagagattaatgagttagataggaaatatggcttatgatagaacattatggcgtaatttg 66771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 160454 - 160325
Alignment:
Q  100 aagagaaattattaagaaagatgtagagattaatgagtttgatagaaatgtggtataatatagaacattatgacgtagtttggtctatgtagctgaccgt 199  Q
    |||||||| ||||| |||||||  ||| ||||||||||| ||  ||||| |||| ||  ||||||||||||| |||| ||||    |||||||  |||      
T  160454 aagagaaactattaggaaagattaagaaattaatgagttcgaccgaaatatggtttatgatagaacattatggcgtaatttgaatcatgtagccaacccc 160355  T
Q  200 acttagtgggataatgcttggttgttgttg 229  Q
    ||||||||||| || |||||||||||||||    
T  160354 acttagtgggaaaaggcttggttgttgttg 160325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 16789 - 16861
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgta 231  Q
    |||||||| |||| |||  |||| |||||||||| |||   |||||||||||||| |||||||||||||||||    
T  16789 atagaacactatggcgtcatttgatctatgtagccgactccacttagtgggataaggcttggttgttgttgta 16861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 28960 - 28889
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| |||| |||  |||| || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  28960 atagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 25603 - 25532
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgt 230  Q
    |||||||| ||||||||  |||  || ||||||| ||||  |||||||||||||| ||||||||||||||||    
T  25603 atagaacactatgacgtcatttaatccatgtagcggaccccacttagtgggataaggcttggttgttgttgt 25532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 3648 - 3713
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgt 224  Q
    |||||||||||||||||| |||| || | ||||| ||||  ||||||||||||||  |||||||||    
T  3648 atagaacattatgacgtaatttgatccaagtagccgaccccacttagtgggataagacttggttgt 3713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 11945 - 11986
Alignment:
Q  96 ctataagagaaattattaagaaagatgtagagattaatgagt 137  Q
    |||||||||||| ||||||||| ||| |||||||||||||||    
T  11945 ctataagagaaactattaagaaggatctagagattaatgagt 11986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 82929 - 83002
Alignment:
Q  159 atagaacattatgacgtagtttggtctatgtagctgaccgtacttagtgggataatgcttggttgttgttgtac 232  Q
    |||||||| ||||||||  |||| || ||||||| ||||  ||||| ||| |||| ||||||||||||||||||    
T  82929 atagaacactatgacgtcatttgatccatgtagccgaccccacttaatggaataaggcttggttgttgttgtac 83002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1286 times since January 2019
Visitors: 3079